Warning: Permanently added '2620:52:3:1:dead:beef:cafe:c156' (ED25519) to the list of known hosts. Running: /usr/bin/copr-rpmbuild --verbose --drop-resultdir --build-id 5186407 --chroot fedora-rawhide-i386 --detached Version: 0.62 PID: 12734 Logging PID: 12735 Task: {'appstream': False, 'background': True, 'build_id': 5186407, 'buildroot_pkgs': [], 'chroot': 'fedora-rawhide-i386', 'enable_net': False, 'fedora_review': False, 'git_hash': '76d442271d49f7ea42a4faa4c3fc8a71c5953ecb', 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/jakub/gcc-13-test/smoldyn', 'isolation': 'default', 'memory_reqs': 2048, 'package_name': 'smoldyn', 'package_version': '2.67.3-3', 'project_dirname': 'gcc-13-test', 'project_name': 'gcc-13-test', 'project_owner': 'jakub', 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/jakub/gcc-13-test/fedora-rawhide-i386/', 'id': 'copr_base', 'name': 'Copr repository'}, {'baseurl': 'https://jakub.fedorapeople.org/fedora-gcc13-$arch/', 'id': 'https_jakub_fedorapeople_org_fedora_gcc13_arch', 'name': 'Additional repo https_jakub_fedorapeople_org_fedora_gcc13_arch'}], 'sandbox': 'jakub/gcc-13-test--jakub', 'source_json': {}, 'source_type': None, 'submitter': 'jakub', 'tags': [], 'task_id': '5186407-fedora-rawhide-i386', 'timeout': 115200, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/jakub/gcc-13-test/smoldyn /var/lib/copr-rpmbuild/workspace/workdir-9jv_nypz/smoldyn --depth 500 --no-single-branch --recursive cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/jakub/gcc-13-test/smoldyn', '/var/lib/copr-rpmbuild/workspace/workdir-9jv_nypz/smoldyn', '--depth', '500', '--no-single-branch', '--recursive'] cwd: . rc: 0 stdout: stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-9jv_nypz/smoldyn'... Running: git checkout 76d442271d49f7ea42a4faa4c3fc8a71c5953ecb cmd: ['git', 'checkout', '76d442271d49f7ea42a4faa4c3fc8a71c5953ecb'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-9jv_nypz/smoldyn rc: 0 stdout: stderr: Note: switching to '76d442271d49f7ea42a4faa4c3fc8a71c5953ecb'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at 76d4422 automatic import of smoldyn Running: copr-distgit-client sources /usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated cmd: ['copr-distgit-client', 'sources'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-9jv_nypz/smoldyn rc: 0 stdout: stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD INFO: Reading sources specification file: sources INFO: Downloading Smoldyn-2.67.3.tar.gz INFO: Calling: curl -H Pragma: -o Smoldyn-2.67.3.tar.gz --location --remote-time --show-error --fail https://copr-dist-git.fedorainfracloud.org/repo/pkgs/jakub/gcc-13-test/smoldyn/Smoldyn-2.67.3.tar.gz/md5/061227e5683e484b0dd465d378e5390b/Smoldyn-2.67.3.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 92.0M 100 92.0M 0 0 28.7M 0 0:00:03 0:00:03 --:--:-- 28.7M INFO: Reading stdout from command: md5sum Smoldyn-2.67.3.tar.gz Running (timeout=115200): unbuffer mock --buildsrpm --spec /var/lib/copr-rpmbuild/workspace/workdir-9jv_nypz/smoldyn/smoldyn.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-9jv_nypz/smoldyn --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1672332313.507491 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 3.5 starting (python version = 3.11.0, NVR = mock-3.5-1.fc37)... Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-9jv_nypz/smoldyn/smoldyn.spec) Config(fedora-rawhide-i686) Start: clean chroot Finish: clean chroot Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-i686-bootstrap-1672332313.507491/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: enabled HW Info plugin Mock Version: 3.5 INFO: Mock Version: 3.5 Start(bootstrap): dnf install No matches found for the following disable plugin patterns: local, spacewalk, versionlock Updating Subscription Management repositories. Unable to read consumer identity This system is not registered with an entitlement server. You can use subscription-manager to register. Copr repository 52 MB/s | 37 MB 00:00 Additional repo https_jakub_fedorapeople_org_fe 364 kB/s | 86 kB 00:00 local 76 MB/s | 60 MB 00:00 Dependencies resolved. ========================================================================================================================= Package Arch Version Repository Size ========================================================================================================================= Installing: dnf noarch 4.14.0-1.fc38 local 469 k dnf-plugins-core noarch 4.3.1-1.fc38 local 34 k Installing dependencies: alternatives i686 1.21-1.fc38 copr_base 39 k audit-libs i686 3.0.9-2.fc38 local 122 k basesystem noarch 11-14.fc37 local 7.0 k bash i686 5.2.9-3.fc38 copr_base 1.8 M bzip2-libs i686 1.0.8-12.fc38 copr_base 42 k ca-certificates noarch 2022.2.54-5.fc37 local 829 k coreutils i686 9.1-8.fc38 copr_base 1.1 M coreutils-common i686 9.1-8.fc38 copr_base 2.0 M crypto-policies noarch 20221215-1.gita4c31a3.fc38 local 63 k curl i686 7.87.0-1.fc38 copr_base 347 k cyrus-sasl-lib i686 2.1.28-8.fc38 copr_base 858 k dbus-libs i686 1:1.14.4-1.fc38 copr_base 167 k dnf-data noarch 4.14.0-1.fc38 local 43 k elfutils-default-yama-scope noarch 0.188-3.fc38 copr_base 16 k elfutils-libelf i686 0.188-3.fc38 copr_base 204 k elfutils-libs i686 0.188-3.fc38 copr_base 287 k expat i686 2.5.0-1.fc38 copr_base 115 k fedora-gpg-keys noarch 38-0.3 local 115 k fedora-release noarch 38-0.6 local 11 k fedora-release-common noarch 38-0.6 local 21 k fedora-release-identity-basic noarch 38-0.6 local 11 k fedora-repos noarch 38-0.3 local 10 k fedora-repos-rawhide noarch 38-0.3 local 9.7 k file-libs i686 5.42-4.fc38 copr_base 684 k filesystem i686 3.18-2.fc37 local 1.1 M findutils i686 1:4.9.0-2.fc38 copr_base 494 k gawk i686 5.1.1-4.fc38 copr_base 1.0 M gdbm-libs i686 1:1.23-2.fc38 copr_base 60 k glib2 i686 2.74.1-2.fc38 copr_base 2.8 M glibc i686 2.36.9000-19.fc38 local 1.9 M glibc-common i686 2.36.9000-19.fc38 local 315 k glibc-minimal-langpack i686 2.36.9000-19.fc38 local 30 k gmp i686 1:6.2.1-3.fc38 copr_base 306 k gnupg2 i686 2.3.8-1.fc38 copr_base 2.6 M gnutls i686 3.7.8-9.fc38 copr_base 1.1 M gpgme i686 1.17.1-3.fc38 copr_base 219 k grep i686 3.8-1.fc38 copr_base 289 k ima-evm-utils i686 1.4-6.fc38 copr_base 63 k json-c i686 0.16-3.fc38 copr_base 44 k keyutils-libs i686 1.6.1-5.fc38 copr_base 32 k krb5-libs i686 1.20.1-3.fc38 copr_base 764 k libacl i686 2.3.1-4.fc38 copr_base 25 k libarchive i686 3.6.1-3.fc38 copr_base 442 k libassuan i686 2.5.5-5.fc38 copr_base 69 k libattr i686 2.5.1-5.fc38 copr_base 19 k libb2 i686 0.98.1-7.fc38 copr_base 29 k libblkid i686 2.38.1-3.fc38 local 116 k libbrotli i686 1.0.9-9.fc38 copr_base 318 k libcap i686 2.48-5.fc38 copr_base 69 k libcap-ng i686 0.8.3-4.fc38 copr_base 33 k libcom_err i686 1.46.5-3.fc37 local 26 k libcomps i686 0.1.18-4.fc38 copr_base 84 k libcurl i686 7.87.0-1.fc38 copr_base 327 k libdnf i686 0.68.0-1.fc38 copr_base 713 k libevent i686 2.1.12-7.fc38 copr_base 277 k libffi i686 3.4.4-1.fc38 copr_base 36 k libfsverity i686 1.4-8.fc38 copr_base 21 k libgcc i686 13.0.0-0.4.fc38 https_jakub_fedorapeople_org_fedora_gcc13_arch 101 k libgcrypt i686 1.10.1-6.fc38 copr_base 479 k libgomp i686 13.0.0-0.4.fc38 https_jakub_fedorapeople_org_fedora_gcc13_arch 304 k libgpg-error i686 1.46-1.fc38 copr_base 226 k libidn2 i686 2.3.4-1.fc38 copr_base 155 k libksba i686 1.6.3-1.fc38 copr_base 161 k libmodulemd i686 2.14.0-4.fc38 copr_base 242 k libmount i686 2.38.1-3.fc38 local 141 k libnghttp2 i686 1.51.0-1.fc38 copr_base 81 k libnsl2 i686 2.0.0-4.fc38 copr_base 32 k libpsl i686 0.21.2-1.fc38 local 66 k librepo i686 1.15.1-1.fc38 copr_base 102 k libreport-filesystem noarch 2.17.6-1.fc38 copr_base 14 k libselinux i686 3.5-0.rc1.1.fc38 local 91 k libsemanage i686 3.5-0.rc1.1.fc38 local 128 k libsepol i686 3.5-0.rc1.1.fc38 local 336 k libsigsegv i686 2.14-3.fc38 copr_base 28 k libsmartcols i686 2.38.1-3.fc38 local 65 k libsolv i686 0.7.22-3.fc38 copr_base 426 k libssh i686 0.10.4-2.fc38 copr_base 223 k libssh-config noarch 0.10.4-2.fc38 copr_base 9.3 k libstdc++ i686 13.0.0-0.4.fc38 https_jakub_fedorapeople_org_fedora_gcc13_arch 857 k libtasn1 i686 4.19.0-1.fc38 copr_base 77 k libtirpc i686 1.3.3-0.fc38 copr_base 101 k libunistring i686 1.0-2.fc38 copr_base 549 k libuuid i686 2.38.1-3.fc38 local 28 k libverto i686 0.3.2-4.fc38 copr_base 22 k libxcrypt i686 4.4.33-5.fc38 copr_base 124 k libxml2 i686 2.10.3-2.fc38 copr_base 744 k libyaml i686 0.2.5-8.fc38 copr_base 62 k libzstd i686 1.5.2-3.fc37 local 274 k lua-libs i686 5.4.4-6.fc38 copr_base 149 k lz4-libs i686 1.9.3-5.fc38 copr_base 72 k mpdecimal i686 2.5.1-4.fc38 copr_base 107 k mpfr i686 4.1.1-2.fc38 copr_base 637 k ncurses-base noarch 6.3-5.20221126.fc38 copr_base 62 k ncurses-libs i686 6.3-5.20221126.fc38 copr_base 351 k nettle i686 3.8-2.fc38 copr_base 426 k npth i686 1.6-10.fc38 copr_base 25 k openldap i686 2.6.3-1.fc38 copr_base 274 k openssl-libs i686 1:3.0.5-6.fc38 copr_base 2.1 M p11-kit i686 0.24.1-5.fc38 copr_base 335 k p11-kit-trust i686 0.24.1-5.fc38 copr_base 136 k pcre2 i686 10.40-1.fc38.1 copr_base 235 k pcre2-syntax noarch 10.40-1.fc38.1 copr_base 143 k popt i686 1.19-1.fc38 copr_base 62 k publicsuffix-list-dafsa noarch 20221208-1.fc38 local 59 k python-pip-wheel noarch 22.3.1-1.fc38 local 1.4 M python-setuptools-wheel noarch 65.5.1-1.fc38 local 715 k python3 i686 3.11.1-1.fc38 copr_base 28 k python3-dateutil noarch 1:2.8.2-4.fc37 local 350 k python3-dbus i686 1.3.2-1.fc38 copr_base 151 k python3-distro noarch 1.8.0-1.fc38 local 45 k python3-dnf noarch 4.14.0-1.fc38 local 567 k python3-dnf-plugins-core noarch 4.3.1-1.fc38 local 263 k python3-gpg i686 1.17.1-3.fc38 copr_base 277 k python3-hawkey i686 0.68.0-1.fc38 copr_base 113 k python3-libcomps i686 0.1.18-4.fc38 copr_base 52 k python3-libdnf i686 0.68.0-1.fc38 copr_base 838 k python3-libs i686 3.11.1-1.fc38 copr_base 9.3 M python3-rpm i686 4.18.0-8.fc38 copr_base 96 k python3-six noarch 1.16.0-8.fc37 local 42 k readline i686 8.2-2.fc38 copr_base 219 k rpm i686 4.18.0-8.fc38 copr_base 541 k rpm-build-libs i686 4.18.0-8.fc38 copr_base 102 k rpm-libs i686 4.18.0-8.fc38 copr_base 342 k rpm-sequoia i686 1.2.0-1.fc38 copr_base 914 k rpm-sign-libs i686 4.18.0-8.fc38 copr_base 28 k sed i686 4.8-11.fc38 copr_base 301 k setup noarch 2.14.3-1.fc38 local 146 k shadow-utils i686 2:4.13-3.fc38 copr_base 1.2 M sqlite-libs i686 3.40.0-1.fc38 local 705 k systemd-libs i686 252.4-598.fc38 local 662 k tpm2-tss i686 4.0.0-0.1.rc2.fc38 local 603 k tzdata noarch 2022g-1.fc38 local 432 k xz-libs i686 5.2.9-1.fc38 local 101 k zchunk-libs i686 1.2.3-1.fc38 local 54 k zlib i686 1.2.13-1.fc38 local 92 k Transaction Summary ========================================================================================================================= Install 137 Packages Total download size: 57 M Installed size: 198 M Downloading Packages: (1/137): bzip2-libs-1.0.8-12.fc38.i686.rpm 411 kB/s | 42 kB 00:00 (2/137): alternatives-1.21-1.fc38.i686.rpm 359 kB/s | 39 kB 00:00 (3/137): bash-5.2.9-3.fc38.i686.rpm 12 MB/s | 1.8 MB 00:00 (4/137): coreutils-9.1-8.fc38.i686.rpm 7.0 MB/s | 1.1 MB 00:00 (5/137): curl-7.87.0-1.fc38.i686.rpm 1.8 MB/s | 347 kB 00:00 (6/137): dbus-libs-1.14.4-1.fc38.i686.rpm 1.9 MB/s | 167 kB 00:00 (7/137): cyrus-sasl-lib-2.1.28-8.fc38.i686.rpm 4.7 MB/s | 858 kB 00:00 (8/137): coreutils-common-9.1-8.fc38.i686.rpm 5.9 MB/s | 2.0 MB 00:00 (9/137): elfutils-default-yama-scope-0.188-3.fc 547 kB/s | 16 kB 00:00 (10/137): elfutils-libelf-0.188-3.fc38.i686.rpm 13 MB/s | 204 kB 00:00 (11/137): expat-2.5.0-1.fc38.i686.rpm 8.6 MB/s | 115 kB 00:00 (12/137): elfutils-libs-0.188-3.fc38.i686.rpm 12 MB/s | 287 kB 00:00 (13/137): file-libs-5.42-4.fc38.i686.rpm 17 MB/s | 684 kB 00:00 (14/137): findutils-4.9.0-2.fc38.i686.rpm 11 MB/s | 494 kB 00:00 (15/137): gawk-5.1.1-4.fc38.i686.rpm 16 MB/s | 1.0 MB 00:00 (16/137): gdbm-libs-1.23-2.fc38.i686.rpm 1.4 MB/s | 60 kB 00:00 (17/137): gmp-6.2.1-3.fc38.i686.rpm 4.8 MB/s | 306 kB 00:00 (18/137): glib2-2.74.1-2.fc38.i686.rpm 24 MB/s | 2.8 MB 00:00 (19/137): gnupg2-2.3.8-1.fc38.i686.rpm 23 MB/s | 2.6 MB 00:00 (20/137): gpgme-1.17.1-3.fc38.i686.rpm 5.9 MB/s | 219 kB 00:00 (21/137): gnutls-3.7.8-9.fc38.i686.rpm 16 MB/s | 1.1 MB 00:00 (22/137): grep-3.8-1.fc38.i686.rpm 19 MB/s | 289 kB 00:00 (23/137): ima-evm-utils-1.4-6.fc38.i686.rpm 5.7 MB/s | 63 kB 00:00 (24/137): json-c-0.16-3.fc38.i686.rpm 3.7 MB/s | 44 kB 00:00 (25/137): keyutils-libs-1.6.1-5.fc38.i686.rpm 3.1 MB/s | 32 kB 00:00 (26/137): krb5-libs-1.20.1-3.fc38.i686.rpm 32 MB/s | 764 kB 00:00 (27/137): libacl-2.3.1-4.fc38.i686.rpm 1.2 MB/s | 25 kB 00:00 (28/137): libarchive-3.6.1-3.fc38.i686.rpm 19 MB/s | 442 kB 00:00 (29/137): libassuan-2.5.5-5.fc38.i686.rpm 6.1 MB/s | 69 kB 00:00 (30/137): libattr-2.5.1-5.fc38.i686.rpm 1.7 MB/s | 19 kB 00:00 (31/137): libb2-0.98.1-7.fc38.i686.rpm 2.7 MB/s | 29 kB 00:00 (32/137): libbrotli-1.0.9-9.fc38.i686.rpm 23 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librepo-1.15.1-1.fc38.i686.rpm 8.6 MB/s | 102 kB 00:00 (49/137): libreport-filesystem-2.17.6-1.fc38.no 1.2 MB/s | 14 kB 00:00 (50/137): libsigsegv-2.14-3.fc38.i686.rpm 2.7 MB/s | 28 kB 00:00 (51/137): libsolv-0.7.22-3.fc38.i686.rpm 29 MB/s | 426 kB 00:00 (52/137): libssh-config-0.10.4-2.fc38.noarch.rp 840 kB/s | 9.3 kB 00:00 (53/137): libssh-0.10.4-2.fc38.i686.rpm 14 MB/s | 223 kB 00:00 (54/137): libtirpc-1.3.3-0.fc38.i686.rpm 8.6 MB/s | 101 kB 00:00 (55/137): libtasn1-4.19.0-1.fc38.i686.rpm 6.0 MB/s | 77 kB 00:00 (56/137): libunistring-1.0-2.fc38.i686.rpm 32 MB/s | 549 kB 00:00 (57/137): libverto-0.3.2-4.fc38.i686.rpm 2.1 MB/s | 22 kB 00:00 (58/137): libxcrypt-4.4.33-5.fc38.i686.rpm 10 MB/s | 124 kB 00:00 (59/137): libxml2-2.10.3-2.fc38.i686.rpm 36 MB/s | 744 kB 00:00 (60/137): libyaml-0.2.5-8.fc38.i686.rpm 3.4 MB/s | 62 kB 00:00 (61/137): lua-libs-5.4.4-6.fc38.i686.rpm 8.0 MB/s | 149 kB 00:00 (62/137): lz4-libs-1.9.3-5.fc38.i686.rpm 6.4 MB/s | 72 kB 00:00 (63/137): 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dnf-4.14.0-1.fc38.noarch.rpm 4.1 MB/s | 469 kB 00:00 (108/137): filesystem-3.18-2.fc37.i686.rpm 24 MB/s | 1.1 MB 00:00 (109/137): glibc-common-2.36.9000-19.fc38.i686. 13 MB/s | 315 kB 00:00 (110/137): glibc-2.36.9000-19.fc38.i686.rpm 42 MB/s | 1.9 MB 00:00 (111/137): glibc-minimal-langpack-2.36.9000-19. 2.5 MB/s | 30 kB 00:00 (112/137): libblkid-2.38.1-3.fc38.i686.rpm 9.5 MB/s | 116 kB 00:00 (113/137): libcom_err-1.46.5-3.fc37.i686.rpm 2.3 MB/s | 26 kB 00:00 (114/137): libmount-2.38.1-3.fc38.i686.rpm 11 MB/s | 141 kB 00:00 (115/137): libpsl-0.21.2-1.fc38.i686.rpm 5.4 MB/s | 66 kB 00:00 (116/137): libselinux-3.5-0.rc1.1.fc38.i686.rpm 7.6 MB/s | 91 kB 00:00 (117/137): libsemanage-3.5-0.rc1.1.fc38.i686.rp 10 MB/s | 128 kB 00:00 (118/137): libsmartcols-2.38.1-3.fc38.i686.rpm 5.3 MB/s | 65 kB 00:00 (119/137): libsepol-3.5-0.rc1.1.fc38.i686.rpm 21 MB/s | 336 kB 00:00 (120/137): libuuid-2.38.1-3.fc38.i686.rpm 2.5 MB/s | 28 kB 00:00 (121/137): publicsuffix-list-dafsa-20221208-1.f 4.9 MB/s | 59 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zchunk-libs-1.2.3-1.fc38.i686.rpm 4.0 MB/s | 54 kB 00:00 (137/137): zlib-1.2.13-1.fc38.i686.rpm 5.8 MB/s | 92 kB 00:00 -------------------------------------------------------------------------------- Total 34 MB/s | 57 MB 00:01 Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Running scriptlet: filesystem-3.18-2.fc37.i686 1/1 Preparing : 1/1 Installing : crypto-policies-20221215-1.gita4c31a3.fc38.noarc 1/137 Running scriptlet: crypto-policies-20221215-1.gita4c31a3.fc38.noarc 1/137 Installing : tzdata-2022g-1.fc38.noarch 2/137 Installing : fedora-release-identity-basic-38-0.6.noarch 3/137 Installing : python-setuptools-wheel-65.5.1-1.fc38.noarch 4/137 Installing : publicsuffix-list-dafsa-20221208-1.fc38.noarch 5/137 Installing : fedora-gpg-keys-38-0.3.noarch 6/137 Installing : fedora-release-38-0.6.noarch 7/137 Installing : fedora-release-common-38-0.6.noarch 8/137 Installing : fedora-repos-rawhide-38-0.3.noarch 9/137 Installing : fedora-repos-38-0.3.noarch 10/137 Installing : setup-2.14.3-1.fc38.noarch 11/137 Running scriptlet: setup-2.14.3-1.fc38.noarch 11/137 Installing : filesystem-3.18-2.fc37.i686 12/137 Installing : basesystem-11-14.fc37.noarch 13/137 Installing : pcre2-syntax-10.40-1.fc38.1.noarch 14/137 Installing : 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scriptlet: ca-certificates-2022.2.54-5.fc37.noarch 137/137 Running scriptlet: rpm-4.18.0-8.fc38.i686 137/137 Verifying : alternatives-1.21-1.fc38.i686 1/137 Verifying : bash-5.2.9-3.fc38.i686 2/137 Verifying : bzip2-libs-1.0.8-12.fc38.i686 3/137 Verifying : coreutils-9.1-8.fc38.i686 4/137 Verifying : coreutils-common-9.1-8.fc38.i686 5/137 Verifying : curl-7.87.0-1.fc38.i686 6/137 Verifying : cyrus-sasl-lib-2.1.28-8.fc38.i686 7/137 Verifying : dbus-libs-1:1.14.4-1.fc38.i686 8/137 Verifying : elfutils-default-yama-scope-0.188-3.fc38.noarch 9/137 Verifying : elfutils-libelf-0.188-3.fc38.i686 10/137 Verifying : elfutils-libs-0.188-3.fc38.i686 11/137 Verifying : expat-2.5.0-1.fc38.i686 12/137 Verifying : file-libs-5.42-4.fc38.i686 13/137 Verifying : findutils-1:4.9.0-2.fc38.i686 14/137 Verifying : gawk-5.1.1-4.fc38.i686 15/137 Verifying : gdbm-libs-1:1.23-2.fc38.i686 16/137 Verifying : glib2-2.74.1-2.fc38.i686 17/137 Verifying : gmp-1:6.2.1-3.fc38.i686 18/137 Verifying : 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Verifying : libgcrypt-1.10.1-6.fc38.i686 41/137 Verifying : libgpg-error-1.46-1.fc38.i686 42/137 Verifying : libidn2-2.3.4-1.fc38.i686 43/137 Verifying : libksba-1.6.3-1.fc38.i686 44/137 Verifying : libmodulemd-2.14.0-4.fc38.i686 45/137 Verifying : libnghttp2-1.51.0-1.fc38.i686 46/137 Verifying : libnsl2-2.0.0-4.fc38.i686 47/137 Verifying : librepo-1.15.1-1.fc38.i686 48/137 Verifying : libreport-filesystem-2.17.6-1.fc38.noarch 49/137 Verifying : libsigsegv-2.14-3.fc38.i686 50/137 Verifying : libsolv-0.7.22-3.fc38.i686 51/137 Verifying : libssh-0.10.4-2.fc38.i686 52/137 Verifying : libssh-config-0.10.4-2.fc38.noarch 53/137 Verifying : libtasn1-4.19.0-1.fc38.i686 54/137 Verifying : libtirpc-1.3.3-0.fc38.i686 55/137 Verifying : libunistring-1.0-2.fc38.i686 56/137 Verifying : libverto-0.3.2-4.fc38.i686 57/137 Verifying : libxcrypt-4.4.33-5.fc38.i686 58/137 Verifying : libxml2-2.10.3-2.fc38.i686 59/137 Verifying : libyaml-0.2.5-8.fc38.i686 60/137 Verifying : lua-libs-5.4.4-6.fc38.i686 61/137 Verifying : lz4-libs-1.9.3-5.fc38.i686 62/137 Verifying : mpdecimal-2.5.1-4.fc38.i686 63/137 Verifying : mpfr-4.1.1-2.fc38.i686 64/137 Verifying : ncurses-base-6.3-5.20221126.fc38.noarch 65/137 Verifying : ncurses-libs-6.3-5.20221126.fc38.i686 66/137 Verifying : nettle-3.8-2.fc38.i686 67/137 Verifying : npth-1.6-10.fc38.i686 68/137 Verifying : openldap-2.6.3-1.fc38.i686 69/137 Verifying : openssl-libs-1:3.0.5-6.fc38.i686 70/137 Verifying : p11-kit-0.24.1-5.fc38.i686 71/137 Verifying : p11-kit-trust-0.24.1-5.fc38.i686 72/137 Verifying : pcre2-10.40-1.fc38.1.i686 73/137 Verifying : pcre2-syntax-10.40-1.fc38.1.noarch 74/137 Verifying : popt-1.19-1.fc38.i686 75/137 Verifying : python3-3.11.1-1.fc38.i686 76/137 Verifying : python3-dbus-1.3.2-1.fc38.i686 77/137 Verifying : python3-gpg-1.17.1-3.fc38.i686 78/137 Verifying : python3-hawkey-0.68.0-1.fc38.i686 79/137 Verifying : python3-libcomps-0.1.18-4.fc38.i686 80/137 Verifying : python3-libdnf-0.68.0-1.fc38.i686 81/137 Verifying : python3-libs-3.11.1-1.fc38.i686 82/137 Verifying : python3-rpm-4.18.0-8.fc38.i686 83/137 Verifying : readline-8.2-2.fc38.i686 84/137 Verifying : rpm-4.18.0-8.fc38.i686 85/137 Verifying : rpm-build-libs-4.18.0-8.fc38.i686 86/137 Verifying : rpm-libs-4.18.0-8.fc38.i686 87/137 Verifying : rpm-sequoia-1.2.0-1.fc38.i686 88/137 Verifying : rpm-sign-libs-4.18.0-8.fc38.i686 89/137 Verifying : sed-4.8-11.fc38.i686 90/137 Verifying : shadow-utils-2:4.13-3.fc38.i686 91/137 Verifying : libgcc-13.0.0-0.4.fc38.i686 92/137 Verifying : libgomp-13.0.0-0.4.fc38.i686 93/137 Verifying : libstdc++-13.0.0-0.4.fc38.i686 94/137 Verifying : audit-libs-3.0.9-2.fc38.i686 95/137 Verifying : basesystem-11-14.fc37.noarch 96/137 Verifying : ca-certificates-2022.2.54-5.fc37.noarch 97/137 Verifying : crypto-policies-20221215-1.gita4c31a3.fc38.noarc 98/137 Verifying : dnf-4.14.0-1.fc38.noarch 99/137 Verifying : dnf-data-4.14.0-1.fc38.noarch 100/137 Verifying : dnf-plugins-core-4.3.1-1.fc38.noarch 101/137 Verifying : fedora-gpg-keys-38-0.3.noarch 102/137 Verifying : fedora-release-38-0.6.noarch 103/137 Verifying : fedora-release-common-38-0.6.noarch 104/137 Verifying : fedora-release-identity-basic-38-0.6.noarch 105/137 Verifying : fedora-repos-38-0.3.noarch 106/137 Verifying : fedora-repos-rawhide-38-0.3.noarch 107/137 Verifying : filesystem-3.18-2.fc37.i686 108/137 Verifying : glibc-2.36.9000-19.fc38.i686 109/137 Verifying : glibc-common-2.36.9000-19.fc38.i686 110/137 Verifying : glibc-minimal-langpack-2.36.9000-19.fc38.i686 111/137 Verifying : libblkid-2.38.1-3.fc38.i686 112/137 Verifying : libcom_err-1.46.5-3.fc37.i686 113/137 Verifying : libmount-2.38.1-3.fc38.i686 114/137 Verifying : libpsl-0.21.2-1.fc38.i686 115/137 Verifying : libselinux-3.5-0.rc1.1.fc38.i686 116/137 Verifying : libsemanage-3.5-0.rc1.1.fc38.i686 117/137 Verifying : libsepol-3.5-0.rc1.1.fc38.i686 118/137 Verifying : libsmartcols-2.38.1-3.fc38.i686 119/137 Verifying : libuuid-2.38.1-3.fc38.i686 120/137 Verifying : libzstd-1.5.2-3.fc37.i686 121/137 Verifying : publicsuffix-list-dafsa-20221208-1.fc38.noarch 122/137 Verifying : python-pip-wheel-22.3.1-1.fc38.noarch 123/137 Verifying : python-setuptools-wheel-65.5.1-1.fc38.noarch 124/137 Verifying : python3-dateutil-1:2.8.2-4.fc37.noarch 125/137 Verifying : python3-distro-1.8.0-1.fc38.noarch 126/137 Verifying : python3-dnf-4.14.0-1.fc38.noarch 127/137 Verifying : python3-dnf-plugins-core-4.3.1-1.fc38.noarch 128/137 Verifying : python3-six-1.16.0-8.fc37.noarch 129/137 Verifying : setup-2.14.3-1.fc38.noarch 130/137 Verifying : sqlite-libs-3.40.0-1.fc38.i686 131/137 Verifying : systemd-libs-252.4-598.fc38.i686 132/137 Verifying : tpm2-tss-4.0.0-0.1.rc2.fc38.i686 133/137 Verifying : tzdata-2022g-1.fc38.noarch 134/137 Verifying : xz-libs-5.2.9-1.fc38.i686 135/137 Verifying : zchunk-libs-1.2.3-1.fc38.i686 136/137 Verifying : zlib-1.2.13-1.fc38.i686 137/137 Installed products updated. Installed: alternatives-1.21-1.fc38.i686 audit-libs-3.0.9-2.fc38.i686 basesystem-11-14.fc37.noarch bash-5.2.9-3.fc38.i686 bzip2-libs-1.0.8-12.fc38.i686 ca-certificates-2022.2.54-5.fc37.noarch coreutils-9.1-8.fc38.i686 coreutils-common-9.1-8.fc38.i686 crypto-policies-20221215-1.gita4c31a3.fc38.noarch curl-7.87.0-1.fc38.i686 cyrus-sasl-lib-2.1.28-8.fc38.i686 dbus-libs-1:1.14.4-1.fc38.i686 dnf-4.14.0-1.fc38.noarch dnf-data-4.14.0-1.fc38.noarch dnf-plugins-core-4.3.1-1.fc38.noarch elfutils-default-yama-scope-0.188-3.fc38.noarch elfutils-libelf-0.188-3.fc38.i686 elfutils-libs-0.188-3.fc38.i686 expat-2.5.0-1.fc38.i686 fedora-gpg-keys-38-0.3.noarch fedora-release-38-0.6.noarch fedora-release-common-38-0.6.noarch fedora-release-identity-basic-38-0.6.noarch fedora-repos-38-0.3.noarch fedora-repos-rawhide-38-0.3.noarch file-libs-5.42-4.fc38.i686 filesystem-3.18-2.fc37.i686 findutils-1:4.9.0-2.fc38.i686 gawk-5.1.1-4.fc38.i686 gdbm-libs-1:1.23-2.fc38.i686 glib2-2.74.1-2.fc38.i686 glibc-2.36.9000-19.fc38.i686 glibc-common-2.36.9000-19.fc38.i686 glibc-minimal-langpack-2.36.9000-19.fc38.i686 gmp-1:6.2.1-3.fc38.i686 gnupg2-2.3.8-1.fc38.i686 gnutls-3.7.8-9.fc38.i686 gpgme-1.17.1-3.fc38.i686 grep-3.8-1.fc38.i686 ima-evm-utils-1.4-6.fc38.i686 json-c-0.16-3.fc38.i686 keyutils-libs-1.6.1-5.fc38.i686 krb5-libs-1.20.1-3.fc38.i686 libacl-2.3.1-4.fc38.i686 libarchive-3.6.1-3.fc38.i686 libassuan-2.5.5-5.fc38.i686 libattr-2.5.1-5.fc38.i686 libb2-0.98.1-7.fc38.i686 libblkid-2.38.1-3.fc38.i686 libbrotli-1.0.9-9.fc38.i686 libcap-2.48-5.fc38.i686 libcap-ng-0.8.3-4.fc38.i686 libcom_err-1.46.5-3.fc37.i686 libcomps-0.1.18-4.fc38.i686 libcurl-7.87.0-1.fc38.i686 libdnf-0.68.0-1.fc38.i686 libevent-2.1.12-7.fc38.i686 libffi-3.4.4-1.fc38.i686 libfsverity-1.4-8.fc38.i686 libgcc-13.0.0-0.4.fc38.i686 libgcrypt-1.10.1-6.fc38.i686 libgomp-13.0.0-0.4.fc38.i686 libgpg-error-1.46-1.fc38.i686 libidn2-2.3.4-1.fc38.i686 libksba-1.6.3-1.fc38.i686 libmodulemd-2.14.0-4.fc38.i686 libmount-2.38.1-3.fc38.i686 libnghttp2-1.51.0-1.fc38.i686 libnsl2-2.0.0-4.fc38.i686 libpsl-0.21.2-1.fc38.i686 librepo-1.15.1-1.fc38.i686 libreport-filesystem-2.17.6-1.fc38.noarch libselinux-3.5-0.rc1.1.fc38.i686 libsemanage-3.5-0.rc1.1.fc38.i686 libsepol-3.5-0.rc1.1.fc38.i686 libsigsegv-2.14-3.fc38.i686 libsmartcols-2.38.1-3.fc38.i686 libsolv-0.7.22-3.fc38.i686 libssh-0.10.4-2.fc38.i686 libssh-config-0.10.4-2.fc38.noarch libstdc++-13.0.0-0.4.fc38.i686 libtasn1-4.19.0-1.fc38.i686 libtirpc-1.3.3-0.fc38.i686 libunistring-1.0-2.fc38.i686 libuuid-2.38.1-3.fc38.i686 libverto-0.3.2-4.fc38.i686 libxcrypt-4.4.33-5.fc38.i686 libxml2-2.10.3-2.fc38.i686 libyaml-0.2.5-8.fc38.i686 libzstd-1.5.2-3.fc37.i686 lua-libs-5.4.4-6.fc38.i686 lz4-libs-1.9.3-5.fc38.i686 mpdecimal-2.5.1-4.fc38.i686 mpfr-4.1.1-2.fc38.i686 ncurses-base-6.3-5.20221126.fc38.noarch ncurses-libs-6.3-5.20221126.fc38.i686 nettle-3.8-2.fc38.i686 npth-1.6-10.fc38.i686 openldap-2.6.3-1.fc38.i686 openssl-libs-1:3.0.5-6.fc38.i686 p11-kit-0.24.1-5.fc38.i686 p11-kit-trust-0.24.1-5.fc38.i686 pcre2-10.40-1.fc38.1.i686 pcre2-syntax-10.40-1.fc38.1.noarch popt-1.19-1.fc38.i686 publicsuffix-list-dafsa-20221208-1.fc38.noarch python-pip-wheel-22.3.1-1.fc38.noarch python-setuptools-wheel-65.5.1-1.fc38.noarch python3-3.11.1-1.fc38.i686 python3-dateutil-1:2.8.2-4.fc37.noarch python3-dbus-1.3.2-1.fc38.i686 python3-distro-1.8.0-1.fc38.noarch python3-dnf-4.14.0-1.fc38.noarch python3-dnf-plugins-core-4.3.1-1.fc38.noarch python3-gpg-1.17.1-3.fc38.i686 python3-hawkey-0.68.0-1.fc38.i686 python3-libcomps-0.1.18-4.fc38.i686 python3-libdnf-0.68.0-1.fc38.i686 python3-libs-3.11.1-1.fc38.i686 python3-rpm-4.18.0-8.fc38.i686 python3-six-1.16.0-8.fc37.noarch readline-8.2-2.fc38.i686 rpm-4.18.0-8.fc38.i686 rpm-build-libs-4.18.0-8.fc38.i686 rpm-libs-4.18.0-8.fc38.i686 rpm-sequoia-1.2.0-1.fc38.i686 rpm-sign-libs-4.18.0-8.fc38.i686 sed-4.8-11.fc38.i686 setup-2.14.3-1.fc38.noarch shadow-utils-2:4.13-3.fc38.i686 sqlite-libs-3.40.0-1.fc38.i686 systemd-libs-252.4-598.fc38.i686 tpm2-tss-4.0.0-0.1.rc2.fc38.i686 tzdata-2022g-1.fc38.noarch xz-libs-5.2.9-1.fc38.i686 zchunk-libs-1.2.3-1.fc38.i686 zlib-1.2.13-1.fc38.i686 Complete! Finish(bootstrap): dnf install Start(bootstrap): creating root cache Finish(bootstrap): creating root cache Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-i686-1672332313.507491/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin Mock Version: 3.5 INFO: Mock Version: 3.5 Start: dnf install No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 11 kB/s | 3.0 kB 00:00 Copr repository 39 MB/s | 37 MB 00:00 Additional repo https_jakub_fedorapeople_org_fe 10 kB/s | 3.0 kB 00:00 local 14 kB/s | 3.8 kB 00:00 Dependencies resolved. ========================================================================================================================= Package Arch Version Repository Size ========================================================================================================================= Installing group/module packages: bash i686 5.2.9-3.fc38 copr_base 1.8 M bzip2 i686 1.0.8-12.fc38 copr_base 53 k coreutils i686 9.1-8.fc38 copr_base 1.1 M cpio i686 2.13-13.fc38 copr_base 274 k diffutils i686 3.8-3.fc38 copr_base 375 k fedora-release noarch 38-0.6 local 11 k findutils i686 1:4.9.0-2.fc38 copr_base 494 k gawk i686 5.1.1-4.fc38 copr_base 1.0 M glibc-minimal-langpack i686 2.36.9000-19.fc38 local 30 k grep i686 3.8-1.fc38 copr_base 289 k gzip i686 1.12-2.fc38 copr_base 158 k info i686 7.0.1-1.fc38 local 183 k patch i686 2.7.6-17.fc38 copr_base 138 k redhat-rpm-config noarch 236-1.fc38 local 74 k rpm-build i686 4.18.0-8.fc38 copr_base 70 k sed i686 4.8-11.fc38 copr_base 301 k shadow-utils i686 2:4.13-3.fc38 copr_base 1.2 M tar i686 2:1.34-5.fc38 local 892 k unzip i686 6.0-58.fc38 local 177 k util-linux i686 2.38.1-3.fc38 local 2.3 M which i686 2.21-36.fc38 local 42 k xz i686 5.2.9-1.fc38 local 300 k Installing dependencies: alternatives i686 1.21-1.fc38 copr_base 39 k ansible-srpm-macros noarch 1-8.1.fc38 local 8.6 k audit-libs i686 3.0.9-2.fc38 local 122 k authselect i686 1.4.2-1.fc38 copr_base 141 k authselect-libs i686 1.4.2-1.fc38 copr_base 239 k basesystem noarch 11-14.fc37 local 7.0 k binutils i686 2.39-6.fc38 copr_base 5.6 M binutils-gold i686 2.39-6.fc38 copr_base 853 k bzip2-libs i686 1.0.8-12.fc38 copr_base 42 k ca-certificates noarch 2022.2.54-5.fc37 local 829 k coreutils-common i686 9.1-8.fc38 copr_base 2.0 M cracklib i686 2.9.7-30.fc38 copr_base 82 k crypto-policies noarch 20221215-1.gita4c31a3.fc38 local 63 k curl i686 7.87.0-1.fc38 copr_base 347 k cyrus-sasl-lib i686 2.1.28-8.fc38 copr_base 858 k debugedit i686 5.0-5.fc37 local 78 k dwz i686 0.15-1.fc38 copr_base 144 k ed i686 1.18-2.fc38 copr_base 78 k efi-srpm-macros noarch 5-6.fc37 local 22 k elfutils i686 0.188-3.fc38 copr_base 543 k elfutils-debuginfod-client i686 0.188-3.fc38 copr_base 41 k elfutils-default-yama-scope noarch 0.188-3.fc38 copr_base 16 k elfutils-libelf i686 0.188-3.fc38 copr_base 204 k elfutils-libs i686 0.188-3.fc38 copr_base 287 k fedora-gpg-keys noarch 38-0.3 local 115 k fedora-release-common noarch 38-0.6 local 21 k fedora-release-identity-basic noarch 38-0.6 local 11 k fedora-repos noarch 38-0.3 local 10 k fedora-repos-rawhide noarch 38-0.3 local 9.7 k file i686 5.42-4.fc38 copr_base 49 k file-libs i686 5.42-4.fc38 copr_base 684 k filesystem i686 3.18-2.fc37 local 1.1 M fonts-srpm-macros noarch 1:2.0.5-10.fc38 local 26 k fpc-srpm-macros noarch 1.3-6.fc37 local 7.7 k gdb-minimal i686 12.1-10.fc38 local 3.9 M gdbm-libs i686 1:1.23-2.fc38 copr_base 60 k ghc-srpm-macros noarch 1.5.0-7.fc37 local 7.8 k glibc i686 2.36.9000-19.fc38 local 1.9 M glibc-common i686 2.36.9000-19.fc38 local 315 k glibc-gconv-extra i686 2.36.9000-19.fc38 local 1.6 M gmp i686 1:6.2.1-3.fc38 copr_base 306 k gnat-srpm-macros noarch 4-16.fc37 local 8.3 k go-srpm-macros noarch 3.2.0-1.fc38 local 27 k jansson i686 2.13.1-5.fc38 copr_base 47 k kernel-srpm-macros noarch 1.0-15.fc37 local 9.4 k keyutils-libs i686 1.6.1-5.fc38 copr_base 32 k krb5-libs i686 1.20.1-3.fc38 copr_base 764 k libacl i686 2.3.1-4.fc38 copr_base 25 k libarchive i686 3.6.1-3.fc38 copr_base 442 k libattr i686 2.5.1-5.fc38 copr_base 19 k libblkid i686 2.38.1-3.fc38 local 116 k libbrotli i686 1.0.9-9.fc38 copr_base 318 k libcap i686 2.48-5.fc38 copr_base 69 k libcap-ng i686 0.8.3-4.fc38 copr_base 33 k libcom_err i686 1.46.5-3.fc37 local 26 k libcurl i686 7.87.0-1.fc38 copr_base 327 k libdb i686 5.3.28-54.fc38 copr_base 823 k libeconf i686 0.4.0-4.fc38 copr_base 29 k libevent i686 2.1.12-7.fc38 copr_base 277 k libfdisk i686 2.38.1-3.fc38 local 173 k libffi i686 3.4.4-1.fc38 copr_base 36 k libgcc i686 13.0.0-0.4.fc38 https_jakub_fedorapeople_org_fedora_gcc13_arch 101 k libgomp i686 13.0.0-0.4.fc38 https_jakub_fedorapeople_org_fedora_gcc13_arch 304 k libidn2 i686 2.3.4-1.fc38 copr_base 155 k libmount i686 2.38.1-3.fc38 local 141 k libnghttp2 i686 1.51.0-1.fc38 copr_base 81 k libnsl2 i686 2.0.0-4.fc38 copr_base 32 k libpkgconf i686 1.8.0-3.fc38 copr_base 39 k libpsl i686 0.21.2-1.fc38 local 66 k libpwquality i686 1.4.5-1.fc38 local 108 k libselinux i686 3.5-0.rc1.1.fc38 local 91 k libsemanage i686 3.5-0.rc1.1.fc38 local 128 k libsepol i686 3.5-0.rc1.1.fc38 local 336 k libsigsegv i686 2.14-3.fc38 copr_base 28 k libsmartcols i686 2.38.1-3.fc38 local 65 k libssh i686 0.10.4-2.fc38 copr_base 223 k libssh-config noarch 0.10.4-2.fc38 copr_base 9.3 k libstdc++ i686 13.0.0-0.4.fc38 https_jakub_fedorapeople_org_fedora_gcc13_arch 857 k libtasn1 i686 4.19.0-1.fc38 copr_base 77 k libtirpc i686 1.3.3-0.fc38 copr_base 101 k libunistring i686 1.0-2.fc38 copr_base 549 k libutempter i686 1.2.1-7.fc38 copr_base 27 k libuuid i686 2.38.1-3.fc38 local 28 k libverto i686 0.3.2-4.fc38 copr_base 22 k libxcrypt i686 4.4.33-5.fc38 copr_base 124 k libxml2 i686 2.10.3-2.fc38 copr_base 744 k libzstd i686 1.5.2-3.fc37 local 274 k lua-libs i686 5.4.4-6.fc38 copr_base 149 k lua-srpm-macros noarch 1-7.fc37 local 8.8 k lz4-libs i686 1.9.3-5.fc38 copr_base 72 k mpfr i686 4.1.1-2.fc38 copr_base 637 k ncurses-base noarch 6.3-5.20221126.fc38 copr_base 62 k ncurses-libs i686 6.3-5.20221126.fc38 copr_base 351 k nettle i686 3.8-2.fc38 copr_base 426 k nim-srpm-macros noarch 3-7.fc37 local 8.4 k ocaml-srpm-macros noarch 7-2.fc37 local 13 k openblas-srpm-macros noarch 2-12.fc37 local 7.5 k openldap i686 2.6.3-1.fc38 copr_base 274 k openssl-libs i686 1:3.0.5-6.fc38 copr_base 2.1 M p11-kit i686 0.24.1-5.fc38 copr_base 335 k p11-kit-trust i686 0.24.1-5.fc38 copr_base 136 k package-notes-srpm-macros noarch 0.5-6.fc38 local 11 k pam i686 1.5.2-15.fc38 copr_base 536 k pam-libs i686 1.5.2-15.fc38 copr_base 60 k pcre2 i686 10.40-1.fc38.1 copr_base 235 k pcre2-syntax noarch 10.40-1.fc38.1 copr_base 143 k perl-srpm-macros noarch 1-47.fc38 local 8.2 k pkgconf i686 1.8.0-3.fc38 copr_base 42 k pkgconf-m4 noarch 1.8.0-3.fc38 copr_base 15 k pkgconf-pkg-config i686 1.8.0-3.fc38 copr_base 11 k popt i686 1.19-1.fc38 copr_base 62 k publicsuffix-list-dafsa noarch 20221208-1.fc38 local 59 k python-srpm-macros noarch 3.11-6.fc38 local 25 k qt5-srpm-macros noarch 5.15.7-1.fc38 copr_base 8.5 k readline i686 8.2-2.fc38 copr_base 219 k rpm i686 4.18.0-8.fc38 copr_base 541 k rpm-build-libs i686 4.18.0-8.fc38 copr_base 102 k rpm-libs i686 4.18.0-8.fc38 copr_base 342 k rpm-sequoia i686 1.2.0-1.fc38 copr_base 914 k rpmautospec-rpm-macros noarch 0.3.1-1.fc38 copr_base 9.4 k rust-srpm-macros noarch 23-1.fc38 local 9.4 k setup noarch 2.14.3-1.fc38 local 146 k sqlite-libs i686 3.40.0-1.fc38 local 705 k systemd-libs i686 252.4-598.fc38 local 662 k tzdata noarch 2022g-1.fc38 local 432 k util-linux-core i686 2.38.1-3.fc38 local 467 k xxhash-libs i686 0.8.1-3.fc37 local 59 k xz-libs i686 5.2.9-1.fc38 local 101 k zip i686 3.0-35.fc38 local 263 k zlib i686 1.2.13-1.fc38 local 92 k zstd i686 1.5.2-3.fc37 local 418 k Installing Groups: build Transaction Summary ========================================================================================================================= Install 153 Packages Total size: 53 M Installed size: 178 M Downloading Packages: [SKIPPED] alternatives-1.21-1.fc38.i686.rpm: Already downloaded [SKIPPED] authselect-1.4.2-1.fc38.i686.rpm: Already downloaded [SKIPPED] authselect-libs-1.4.2-1.fc38.i686.rpm: Already downloaded [SKIPPED] bash-5.2.9-3.fc38.i686.rpm: Already downloaded [SKIPPED] binutils-2.39-6.fc38.i686.rpm: Already downloaded [SKIPPED] binutils-gold-2.39-6.fc38.i686.rpm: Already downloaded [SKIPPED] bzip2-1.0.8-12.fc38.i686.rpm: Already downloaded [SKIPPED] bzip2-libs-1.0.8-12.fc38.i686.rpm: Already downloaded [SKIPPED] coreutils-9.1-8.fc38.i686.rpm: Already downloaded [SKIPPED] coreutils-common-9.1-8.fc38.i686.rpm: Already downloaded [SKIPPED] cpio-2.13-13.fc38.i686.rpm: Already downloaded [SKIPPED] cracklib-2.9.7-30.fc38.i686.rpm: Already downloaded [SKIPPED] curl-7.87.0-1.fc38.i686.rpm: Already downloaded [SKIPPED] cyrus-sasl-lib-2.1.28-8.fc38.i686.rpm: Already downloaded [SKIPPED] diffutils-3.8-3.fc38.i686.rpm: Already downloaded [SKIPPED] dwz-0.15-1.fc38.i686.rpm: Already downloaded [SKIPPED] ed-1.18-2.fc38.i686.rpm: Already downloaded [SKIPPED] elfutils-0.188-3.fc38.i686.rpm: Already downloaded [SKIPPED] elfutils-debuginfod-client-0.188-3.fc38.i686.rpm: Already downloaded [SKIPPED] elfutils-default-yama-scope-0.188-3.fc38.noarch.rpm: Already downloaded [SKIPPED] elfutils-libelf-0.188-3.fc38.i686.rpm: Already downloaded [SKIPPED] elfutils-libs-0.188-3.fc38.i686.rpm: Already downloaded [SKIPPED] file-5.42-4.fc38.i686.rpm: Already downloaded [SKIPPED] file-libs-5.42-4.fc38.i686.rpm: Already downloaded [SKIPPED] findutils-4.9.0-2.fc38.i686.rpm: Already downloaded [SKIPPED] gawk-5.1.1-4.fc38.i686.rpm: Already downloaded [SKIPPED] gdbm-libs-1.23-2.fc38.i686.rpm: Already downloaded [SKIPPED] gmp-6.2.1-3.fc38.i686.rpm: Already downloaded [SKIPPED] grep-3.8-1.fc38.i686.rpm: Already downloaded [SKIPPED] gzip-1.12-2.fc38.i686.rpm: Already downloaded [SKIPPED] jansson-2.13.1-5.fc38.i686.rpm: Already downloaded [SKIPPED] keyutils-libs-1.6.1-5.fc38.i686.rpm: Already downloaded [SKIPPED] krb5-libs-1.20.1-3.fc38.i686.rpm: Already downloaded [SKIPPED] libacl-2.3.1-4.fc38.i686.rpm: Already downloaded [SKIPPED] libarchive-3.6.1-3.fc38.i686.rpm: Already downloaded [SKIPPED] libattr-2.5.1-5.fc38.i686.rpm: Already downloaded [SKIPPED] libbrotli-1.0.9-9.fc38.i686.rpm: Already downloaded [SKIPPED] libcap-2.48-5.fc38.i686.rpm: Already downloaded [SKIPPED] libcap-ng-0.8.3-4.fc38.i686.rpm: Already downloaded [SKIPPED] libcurl-7.87.0-1.fc38.i686.rpm: Already downloaded [SKIPPED] libdb-5.3.28-54.fc38.i686.rpm: Already downloaded [SKIPPED] libeconf-0.4.0-4.fc38.i686.rpm: Already downloaded [SKIPPED] libevent-2.1.12-7.fc38.i686.rpm: Already downloaded [SKIPPED] libffi-3.4.4-1.fc38.i686.rpm: Already downloaded [SKIPPED] libidn2-2.3.4-1.fc38.i686.rpm: Already downloaded [SKIPPED] libnghttp2-1.51.0-1.fc38.i686.rpm: Already downloaded [SKIPPED] libnsl2-2.0.0-4.fc38.i686.rpm: Already downloaded [SKIPPED] libpkgconf-1.8.0-3.fc38.i686.rpm: Already downloaded [SKIPPED] libsigsegv-2.14-3.fc38.i686.rpm: Already downloaded [SKIPPED] libssh-0.10.4-2.fc38.i686.rpm: Already downloaded [SKIPPED] libssh-config-0.10.4-2.fc38.noarch.rpm: Already downloaded [SKIPPED] libtasn1-4.19.0-1.fc38.i686.rpm: Already downloaded [SKIPPED] libtirpc-1.3.3-0.fc38.i686.rpm: Already downloaded [SKIPPED] libunistring-1.0-2.fc38.i686.rpm: Already downloaded [SKIPPED] libutempter-1.2.1-7.fc38.i686.rpm: Already downloaded [SKIPPED] libverto-0.3.2-4.fc38.i686.rpm: Already downloaded [SKIPPED] libxcrypt-4.4.33-5.fc38.i686.rpm: Already downloaded [SKIPPED] libxml2-2.10.3-2.fc38.i686.rpm: Already downloaded [SKIPPED] lua-libs-5.4.4-6.fc38.i686.rpm: Already downloaded [SKIPPED] lz4-libs-1.9.3-5.fc38.i686.rpm: Already downloaded [SKIPPED] mpfr-4.1.1-2.fc38.i686.rpm: Already downloaded [SKIPPED] ncurses-base-6.3-5.20221126.fc38.noarch.rpm: Already downloaded [SKIPPED] ncurses-libs-6.3-5.20221126.fc38.i686.rpm: Already downloaded [SKIPPED] nettle-3.8-2.fc38.i686.rpm: Already downloaded [SKIPPED] openldap-2.6.3-1.fc38.i686.rpm: Already downloaded [SKIPPED] openssl-libs-3.0.5-6.fc38.i686.rpm: Already downloaded [SKIPPED] p11-kit-0.24.1-5.fc38.i686.rpm: Already downloaded [SKIPPED] p11-kit-trust-0.24.1-5.fc38.i686.rpm: Already downloaded [SKIPPED] pam-1.5.2-15.fc38.i686.rpm: Already downloaded [SKIPPED] pam-libs-1.5.2-15.fc38.i686.rpm: Already downloaded [SKIPPED] patch-2.7.6-17.fc38.i686.rpm: Already downloaded [SKIPPED] pcre2-10.40-1.fc38.1.i686.rpm: Already downloaded [SKIPPED] pcre2-syntax-10.40-1.fc38.1.noarch.rpm: Already downloaded [SKIPPED] pkgconf-1.8.0-3.fc38.i686.rpm: Already downloaded [SKIPPED] pkgconf-m4-1.8.0-3.fc38.noarch.rpm: Already downloaded [SKIPPED] pkgconf-pkg-config-1.8.0-3.fc38.i686.rpm: Already downloaded [SKIPPED] popt-1.19-1.fc38.i686.rpm: Already downloaded [SKIPPED] qt5-srpm-macros-5.15.7-1.fc38.noarch.rpm: Already downloaded [SKIPPED] readline-8.2-2.fc38.i686.rpm: Already downloaded [SKIPPED] rpm-4.18.0-8.fc38.i686.rpm: Already downloaded [SKIPPED] rpm-build-4.18.0-8.fc38.i686.rpm: Already downloaded [SKIPPED] rpm-build-libs-4.18.0-8.fc38.i686.rpm: Already downloaded [SKIPPED] rpm-libs-4.18.0-8.fc38.i686.rpm: Already downloaded [SKIPPED] rpm-sequoia-1.2.0-1.fc38.i686.rpm: Already downloaded [SKIPPED] rpmautospec-rpm-macros-0.3.1-1.fc38.noarch.rpm: Already downloaded [SKIPPED] sed-4.8-11.fc38.i686.rpm: Already downloaded [SKIPPED] shadow-utils-4.13-3.fc38.i686.rpm: Already downloaded [SKIPPED] libgcc-13.0.0-0.4.fc38.i686.rpm: Already downloaded [SKIPPED] libgomp-13.0.0-0.4.fc38.i686.rpm: Already downloaded [SKIPPED] libstdc++-13.0.0-0.4.fc38.i686.rpm: Already downloaded [SKIPPED] ansible-srpm-macros-1-8.1.fc38.noarch.rpm: Already downloaded [SKIPPED] audit-libs-3.0.9-2.fc38.i686.rpm: Already downloaded [SKIPPED] basesystem-11-14.fc37.noarch.rpm: Already downloaded [SKIPPED] ca-certificates-2022.2.54-5.fc37.noarch.rpm: Already downloaded [SKIPPED] crypto-policies-20221215-1.gita4c31a3.fc38.noarch.rpm: Already downloaded [SKIPPED] debugedit-5.0-5.fc37.i686.rpm: Already downloaded [SKIPPED] efi-srpm-macros-5-6.fc37.noarch.rpm: Already downloaded [SKIPPED] fedora-gpg-keys-38-0.3.noarch.rpm: Already downloaded [SKIPPED] fedora-release-38-0.6.noarch.rpm: Already downloaded [SKIPPED] fedora-release-common-38-0.6.noarch.rpm: Already downloaded [SKIPPED] fedora-release-identity-basic-38-0.6.noarch.rpm: Already downloaded [SKIPPED] fedora-repos-38-0.3.noarch.rpm: Already downloaded [SKIPPED] fedora-repos-rawhide-38-0.3.noarch.rpm: Already downloaded [SKIPPED] filesystem-3.18-2.fc37.i686.rpm: Already downloaded [SKIPPED] fonts-srpm-macros-2.0.5-10.fc38.noarch.rpm: Already downloaded [SKIPPED] fpc-srpm-macros-1.3-6.fc37.noarch.rpm: Already downloaded [SKIPPED] gdb-minimal-12.1-10.fc38.i686.rpm: Already downloaded [SKIPPED] ghc-srpm-macros-1.5.0-7.fc37.noarch.rpm: Already downloaded [SKIPPED] glibc-2.36.9000-19.fc38.i686.rpm: Already downloaded [SKIPPED] glibc-common-2.36.9000-19.fc38.i686.rpm: Already downloaded [SKIPPED] glibc-gconv-extra-2.36.9000-19.fc38.i686.rpm: Already downloaded [SKIPPED] glibc-minimal-langpack-2.36.9000-19.fc38.i686.rpm: Already downloaded [SKIPPED] gnat-srpm-macros-4-16.fc37.noarch.rpm: Already downloaded [SKIPPED] go-srpm-macros-3.2.0-1.fc38.noarch.rpm: Already downloaded [SKIPPED] info-7.0.1-1.fc38.i686.rpm: Already downloaded [SKIPPED] kernel-srpm-macros-1.0-15.fc37.noarch.rpm: Already downloaded [SKIPPED] libblkid-2.38.1-3.fc38.i686.rpm: Already downloaded [SKIPPED] libcom_err-1.46.5-3.fc37.i686.rpm: Already downloaded [SKIPPED] libfdisk-2.38.1-3.fc38.i686.rpm: Already downloaded [SKIPPED] libmount-2.38.1-3.fc38.i686.rpm: Already downloaded [SKIPPED] libpsl-0.21.2-1.fc38.i686.rpm: Already downloaded [SKIPPED] libpwquality-1.4.5-1.fc38.i686.rpm: Already downloaded [SKIPPED] libselinux-3.5-0.rc1.1.fc38.i686.rpm: Already downloaded [SKIPPED] libsemanage-3.5-0.rc1.1.fc38.i686.rpm: Already downloaded [SKIPPED] libsepol-3.5-0.rc1.1.fc38.i686.rpm: Already downloaded [SKIPPED] libsmartcols-2.38.1-3.fc38.i686.rpm: Already downloaded [SKIPPED] libuuid-2.38.1-3.fc38.i686.rpm: Already downloaded [SKIPPED] libzstd-1.5.2-3.fc37.i686.rpm: Already downloaded [SKIPPED] lua-srpm-macros-1-7.fc37.noarch.rpm: Already downloaded [SKIPPED] nim-srpm-macros-3-7.fc37.noarch.rpm: Already downloaded [SKIPPED] ocaml-srpm-macros-7-2.fc37.noarch.rpm: Already downloaded [SKIPPED] openblas-srpm-macros-2-12.fc37.noarch.rpm: Already downloaded [SKIPPED] package-notes-srpm-macros-0.5-6.fc38.noarch.rpm: Already downloaded [SKIPPED] perl-srpm-macros-1-47.fc38.noarch.rpm: Already downloaded [SKIPPED] publicsuffix-list-dafsa-20221208-1.fc38.noarch.rpm: Already downloaded [SKIPPED] python-srpm-macros-3.11-6.fc38.noarch.rpm: Already downloaded [SKIPPED] redhat-rpm-config-236-1.fc38.noarch.rpm: Already downloaded [SKIPPED] rust-srpm-macros-23-1.fc38.noarch.rpm: Already downloaded [SKIPPED] setup-2.14.3-1.fc38.noarch.rpm: Already downloaded [SKIPPED] sqlite-libs-3.40.0-1.fc38.i686.rpm: Already downloaded [SKIPPED] systemd-libs-252.4-598.fc38.i686.rpm: Already downloaded [SKIPPED] tar-1.34-5.fc38.i686.rpm: Already downloaded [SKIPPED] tzdata-2022g-1.fc38.noarch.rpm: Already downloaded [SKIPPED] unzip-6.0-58.fc38.i686.rpm: Already downloaded [SKIPPED] util-linux-2.38.1-3.fc38.i686.rpm: Already downloaded [SKIPPED] util-linux-core-2.38.1-3.fc38.i686.rpm: Already downloaded [SKIPPED] which-2.21-36.fc38.i686.rpm: Already downloaded [SKIPPED] xxhash-libs-0.8.1-3.fc37.i686.rpm: Already downloaded [SKIPPED] xz-5.2.9-1.fc38.i686.rpm: Already downloaded [SKIPPED] xz-libs-5.2.9-1.fc38.i686.rpm: Already downloaded [SKIPPED] zip-3.0-35.fc38.i686.rpm: Already downloaded [SKIPPED] zlib-1.2.13-1.fc38.i686.rpm: Already downloaded [SKIPPED] zstd-1.5.2-3.fc37.i686.rpm: Already downloaded Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Running scriptlet: filesystem-3.18-2.fc37.i686 1/1 Preparing : 1/1 Installing : crypto-policies-20221215-1.gita4c31a3.fc38.noarc 1/153 Running scriptlet: crypto-policies-20221215-1.gita4c31a3.fc38.noarc 1/153 Installing : fedora-release-identity-basic-38-0.6.noarch 2/153 Installing : tzdata-2022g-1.fc38.noarch 3/153 Installing : rust-srpm-macros-23-1.fc38.noarch 4/153 Installing : publicsuffix-list-dafsa-20221208-1.fc38.noarch 5/153 Installing : perl-srpm-macros-1-47.fc38.noarch 6/153 Installing : package-notes-srpm-macros-0.5-6.fc38.noarch 7/153 Installing : openblas-srpm-macros-2-12.fc37.noarch 8/153 Installing : ocaml-srpm-macros-7-2.fc37.noarch 9/153 Installing : nim-srpm-macros-3-7.fc37.noarch 10/153 Installing : kernel-srpm-macros-1.0-15.fc37.noarch 11/153 Installing : gnat-srpm-macros-4-16.fc37.noarch 12/153 Installing : ghc-srpm-macros-1.5.0-7.fc37.noarch 13/153 Installing : fpc-srpm-macros-1.3-6.fc37.noarch 14/153 Installing : fedora-gpg-keys-38-0.3.noarch 15/153 Installing : fedora-release-38-0.6.noarch 16/153 Installing : fedora-release-common-38-0.6.noarch 17/153 Installing : fedora-repos-rawhide-38-0.3.noarch 18/153 Installing : fedora-repos-38-0.3.noarch 19/153 Installing : setup-2.14.3-1.fc38.noarch 20/153 warning: /etc/hosts created as /etc/hosts.rpmnew Running scriptlet: setup-2.14.3-1.fc38.noarch 20/153 Installing : filesystem-3.18-2.fc37.i686 21/153 Installing : basesystem-11-14.fc37.noarch 22/153 Installing : ansible-srpm-macros-1-8.1.fc38.noarch 23/153 Installing : qt5-srpm-macros-5.15.7-1.fc38.noarch 24/153 Installing : pkgconf-m4-1.8.0-3.fc38.noarch 25/153 Installing : pcre2-syntax-10.40-1.fc38.1.noarch 26/153 Installing : ncurses-base-6.3-5.20221126.fc38.noarch 27/153 Installing : libssh-config-0.10.4-2.fc38.noarch 28/153 Installing : coreutils-common-9.1-8.fc38.i686 29/153 Installing : libgcc-13.0.0-0.4.fc38.i686 30/153 Running scriptlet: libgcc-13.0.0-0.4.fc38.i686 30/153 Installing : ncurses-libs-6.3-5.20221126.fc38.i686 31/153 Installing : glibc-gconv-extra-2.36.9000-19.fc38.i686 32/153 Running scriptlet: glibc-gconv-extra-2.36.9000-19.fc38.i686 32/153 Running scriptlet: glibc-2.36.9000-19.fc38.i686 33/153 Installing : glibc-2.36.9000-19.fc38.i686 33/153 Running scriptlet: glibc-2.36.9000-19.fc38.i686 33/153 Installing : bash-5.2.9-3.fc38.i686 34/153 Running scriptlet: bash-5.2.9-3.fc38.i686 34/153 Installing : glibc-common-2.36.9000-19.fc38.i686 35/153 Installing : glibc-minimal-langpack-2.36.9000-19.fc38.i686 36/153 Installing : zlib-1.2.13-1.fc38.i686 37/153 Installing : xz-libs-5.2.9-1.fc38.i686 38/153 Installing : bzip2-libs-1.0.8-12.fc38.i686 39/153 Installing : elfutils-libelf-0.188-3.fc38.i686 40/153 Installing : gmp-1:6.2.1-3.fc38.i686 41/153 Installing : popt-1.19-1.fc38.i686 42/153 Installing : libstdc++-13.0.0-0.4.fc38.i686 43/153 Installing : libuuid-2.38.1-3.fc38.i686 44/153 Installing : libzstd-1.5.2-3.fc37.i686 45/153 Installing : libblkid-2.38.1-3.fc38.i686 46/153 Installing : libattr-2.5.1-5.fc38.i686 47/153 Installing : libacl-2.3.1-4.fc38.i686 48/153 Installing : libcap-2.48-5.fc38.i686 49/153 Installing : libxcrypt-4.4.33-5.fc38.i686 50/153 Installing : readline-8.2-2.fc38.i686 51/153 Installing : lz4-libs-1.9.3-5.fc38.i686 52/153 Installing : systemd-libs-252.4-598.fc38.i686 53/153 Installing : mpfr-4.1.1-2.fc38.i686 54/153 Installing : dwz-0.15-1.fc38.i686 55/153 Installing : unzip-6.0-58.fc38.i686 56/153 Installing : file-libs-5.42-4.fc38.i686 57/153 Installing : file-5.42-4.fc38.i686 58/153 Installing : sqlite-libs-3.40.0-1.fc38.i686 59/153 Installing : alternatives-1.21-1.fc38.i686 60/153 Installing : libcap-ng-0.8.3-4.fc38.i686 61/153 Installing : audit-libs-3.0.9-2.fc38.i686 62/153 Installing : libeconf-0.4.0-4.fc38.i686 63/153 Installing : pam-libs-1.5.2-15.fc38.i686 64/153 Installing : libunistring-1.0-2.fc38.i686 65/153 Installing : libidn2-2.3.4-1.fc38.i686 66/153 Installing : lua-libs-5.4.4-6.fc38.i686 67/153 Installing : pcre2-10.40-1.fc38.1.i686 68/153 Installing : grep-3.8-1.fc38.i686 69/153 Installing : xz-5.2.9-1.fc38.i686 70/153 Installing : libcom_err-1.46.5-3.fc37.i686 71/153 Installing : libsepol-3.5-0.rc1.1.fc38.i686 72/153 Installing : libselinux-3.5-0.rc1.1.fc38.i686 73/153 Installing : sed-4.8-11.fc38.i686 74/153 Installing : findutils-1:4.9.0-2.fc38.i686 75/153 Installing : libmount-2.38.1-3.fc38.i686 76/153 Installing : libsmartcols-2.38.1-3.fc38.i686 77/153 Installing : elfutils-default-yama-scope-0.188-3.fc38.noarch 78/153 Running scriptlet: elfutils-default-yama-scope-0.188-3.fc38.noarch 78/153 Installing : util-linux-core-2.38.1-3.fc38.i686 79/153 Installing : libsemanage-3.5-0.rc1.1.fc38.i686 80/153 Installing : shadow-utils-2:4.13-3.fc38.i686 81/153 Running scriptlet: libutempter-1.2.1-7.fc38.i686 82/153 Installing : libutempter-1.2.1-7.fc38.i686 82/153 Installing : tar-2:1.34-5.fc38.i686 83/153 Installing : libpsl-0.21.2-1.fc38.i686 84/153 Installing : zip-3.0-35.fc38.i686 85/153 Installing : zstd-1.5.2-3.fc37.i686 86/153 Installing : libfdisk-2.38.1-3.fc38.i686 87/153 Installing : nettle-3.8-2.fc38.i686 88/153 Installing : rpm-sequoia-1.2.0-1.fc38.i686 89/153 Installing : rpm-libs-4.18.0-8.fc38.i686 90/153 Installing : bzip2-1.0.8-12.fc38.i686 91/153 Installing : libxml2-2.10.3-2.fc38.i686 92/153 Installing : ed-1.18-2.fc38.i686 93/153 Installing : patch-2.7.6-17.fc38.i686 94/153 Installing : cpio-2.13-13.fc38.i686 95/153 Installing : diffutils-3.8-3.fc38.i686 96/153 Installing : gdbm-libs-1:1.23-2.fc38.i686 97/153 Installing : cyrus-sasl-lib-2.1.28-8.fc38.i686 98/153 Installing : jansson-2.13.1-5.fc38.i686 99/153 Installing : keyutils-libs-1.6.1-5.fc38.i686 100/153 Installing : libbrotli-1.0.9-9.fc38.i686 101/153 Installing : libdb-5.3.28-54.fc38.i686 102/153 Installing : libffi-3.4.4-1.fc38.i686 103/153 Installing : p11-kit-0.24.1-5.fc38.i686 104/153 Installing : libnghttp2-1.51.0-1.fc38.i686 105/153 Installing : libpkgconf-1.8.0-3.fc38.i686 106/153 Installing : pkgconf-1.8.0-3.fc38.i686 107/153 Installing : pkgconf-pkg-config-1.8.0-3.fc38.i686 108/153 Installing : libsigsegv-2.14-3.fc38.i686 109/153 Installing : gawk-5.1.1-4.fc38.i686 110/153 Installing : libtasn1-4.19.0-1.fc38.i686 111/153 Installing : p11-kit-trust-0.24.1-5.fc38.i686 112/153 Running scriptlet: p11-kit-trust-0.24.1-5.fc38.i686 112/153 Installing : openssl-libs-1:3.0.5-6.fc38.i686 113/153 Installing : coreutils-9.1-8.fc38.i686 114/153 Running scriptlet: ca-certificates-2022.2.54-5.fc37.noarch 115/153 Installing : ca-certificates-2022.2.54-5.fc37.noarch 115/153 Running scriptlet: ca-certificates-2022.2.54-5.fc37.noarch 115/153 Running scriptlet: authselect-libs-1.4.2-1.fc38.i686 116/153 Installing : authselect-libs-1.4.2-1.fc38.i686 116/153 Installing : gzip-1.12-2.fc38.i686 117/153 Installing : cracklib-2.9.7-30.fc38.i686 118/153 Installing : libpwquality-1.4.5-1.fc38.i686 119/153 Installing : authselect-1.4.2-1.fc38.i686 120/153 Installing : libarchive-3.6.1-3.fc38.i686 121/153 Installing : libevent-2.1.12-7.fc38.i686 122/153 Installing : openldap-2.6.3-1.fc38.i686 123/153 Installing : libverto-0.3.2-4.fc38.i686 124/153 Installing : krb5-libs-1.20.1-3.fc38.i686 125/153 Installing : libtirpc-1.3.3-0.fc38.i686 126/153 Installing : libnsl2-2.0.0-4.fc38.i686 127/153 Installing : pam-1.5.2-15.fc38.i686 128/153 Installing : libssh-0.10.4-2.fc38.i686 129/153 Installing : libcurl-7.87.0-1.fc38.i686 130/153 Installing : elfutils-libs-0.188-3.fc38.i686 131/153 Installing : elfutils-debuginfod-client-0.188-3.fc38.i686 132/153 Installing : binutils-gold-2.39-6.fc38.i686 133/153 Installing : binutils-2.39-6.fc38.i686 134/153 Running scriptlet: binutils-2.39-6.fc38.i686 134/153 Installing : elfutils-0.188-3.fc38.i686 135/153 Installing : curl-7.87.0-1.fc38.i686 136/153 Running scriptlet: rpm-4.18.0-8.fc38.i686 137/153 Installing : rpm-4.18.0-8.fc38.i686 137/153 Installing : rpmautospec-rpm-macros-0.3.1-1.fc38.noarch 138/153 Installing : efi-srpm-macros-5-6.fc37.noarch 139/153 Installing : lua-srpm-macros-1-7.fc37.noarch 140/153 Installing : fonts-srpm-macros-1:2.0.5-10.fc38.noarch 141/153 Installing : go-srpm-macros-3.2.0-1.fc38.noarch 142/153 Installing : python-srpm-macros-3.11-6.fc38.noarch 143/153 Installing : redhat-rpm-config-236-1.fc38.noarch 144/153 Installing : libgomp-13.0.0-0.4.fc38.i686 145/153 Installing : rpm-build-libs-4.18.0-8.fc38.i686 146/153 Installing : xxhash-libs-0.8.1-3.fc37.i686 147/153 Installing : gdb-minimal-12.1-10.fc38.i686 148/153 Installing : debugedit-5.0-5.fc37.i686 149/153 Installing : rpm-build-4.18.0-8.fc38.i686 150/153 Installing : util-linux-2.38.1-3.fc38.i686 151/153 Installing : which-2.21-36.fc38.i686 152/153 Installing : info-7.0.1-1.fc38.i686 153/153 Running scriptlet: filesystem-3.18-2.fc37.i686 153/153 Running scriptlet: ca-certificates-2022.2.54-5.fc37.noarch 153/153 Running scriptlet: authselect-libs-1.4.2-1.fc38.i686 153/153 Running scriptlet: rpm-4.18.0-8.fc38.i686 153/153 Running scriptlet: info-7.0.1-1.fc38.i686 153/153 Verifying : alternatives-1.21-1.fc38.i686 1/153 Verifying : authselect-1.4.2-1.fc38.i686 2/153 Verifying : authselect-libs-1.4.2-1.fc38.i686 3/153 Verifying : bash-5.2.9-3.fc38.i686 4/153 Verifying : binutils-2.39-6.fc38.i686 5/153 Verifying : binutils-gold-2.39-6.fc38.i686 6/153 Verifying : bzip2-1.0.8-12.fc38.i686 7/153 Verifying : bzip2-libs-1.0.8-12.fc38.i686 8/153 Verifying : coreutils-9.1-8.fc38.i686 9/153 Verifying : coreutils-common-9.1-8.fc38.i686 10/153 Verifying : cpio-2.13-13.fc38.i686 11/153 Verifying : cracklib-2.9.7-30.fc38.i686 12/153 Verifying : curl-7.87.0-1.fc38.i686 13/153 Verifying : cyrus-sasl-lib-2.1.28-8.fc38.i686 14/153 Verifying : diffutils-3.8-3.fc38.i686 15/153 Verifying : dwz-0.15-1.fc38.i686 16/153 Verifying : ed-1.18-2.fc38.i686 17/153 Verifying : elfutils-0.188-3.fc38.i686 18/153 Verifying : elfutils-debuginfod-client-0.188-3.fc38.i686 19/153 Verifying : elfutils-default-yama-scope-0.188-3.fc38.noarch 20/153 Verifying : elfutils-libelf-0.188-3.fc38.i686 21/153 Verifying : elfutils-libs-0.188-3.fc38.i686 22/153 Verifying : file-5.42-4.fc38.i686 23/153 Verifying : file-libs-5.42-4.fc38.i686 24/153 Verifying : findutils-1:4.9.0-2.fc38.i686 25/153 Verifying : gawk-5.1.1-4.fc38.i686 26/153 Verifying : gdbm-libs-1:1.23-2.fc38.i686 27/153 Verifying : gmp-1:6.2.1-3.fc38.i686 28/153 Verifying : grep-3.8-1.fc38.i686 29/153 Verifying : gzip-1.12-2.fc38.i686 30/153 Verifying : jansson-2.13.1-5.fc38.i686 31/153 Verifying : keyutils-libs-1.6.1-5.fc38.i686 32/153 Verifying : krb5-libs-1.20.1-3.fc38.i686 33/153 Verifying : libacl-2.3.1-4.fc38.i686 34/153 Verifying : libarchive-3.6.1-3.fc38.i686 35/153 Verifying : libattr-2.5.1-5.fc38.i686 36/153 Verifying : libbrotli-1.0.9-9.fc38.i686 37/153 Verifying : libcap-2.48-5.fc38.i686 38/153 Verifying : libcap-ng-0.8.3-4.fc38.i686 39/153 Verifying : libcurl-7.87.0-1.fc38.i686 40/153 Verifying : libdb-5.3.28-54.fc38.i686 41/153 Verifying : libeconf-0.4.0-4.fc38.i686 42/153 Verifying : libevent-2.1.12-7.fc38.i686 43/153 Verifying : libffi-3.4.4-1.fc38.i686 44/153 Verifying : libidn2-2.3.4-1.fc38.i686 45/153 Verifying : libnghttp2-1.51.0-1.fc38.i686 46/153 Verifying : libnsl2-2.0.0-4.fc38.i686 47/153 Verifying : libpkgconf-1.8.0-3.fc38.i686 48/153 Verifying : libsigsegv-2.14-3.fc38.i686 49/153 Verifying : libssh-0.10.4-2.fc38.i686 50/153 Verifying : libssh-config-0.10.4-2.fc38.noarch 51/153 Verifying : libtasn1-4.19.0-1.fc38.i686 52/153 Verifying : libtirpc-1.3.3-0.fc38.i686 53/153 Verifying : libunistring-1.0-2.fc38.i686 54/153 Verifying : libutempter-1.2.1-7.fc38.i686 55/153 Verifying : libverto-0.3.2-4.fc38.i686 56/153 Verifying : libxcrypt-4.4.33-5.fc38.i686 57/153 Verifying : libxml2-2.10.3-2.fc38.i686 58/153 Verifying : lua-libs-5.4.4-6.fc38.i686 59/153 Verifying : lz4-libs-1.9.3-5.fc38.i686 60/153 Verifying : mpfr-4.1.1-2.fc38.i686 61/153 Verifying : ncurses-base-6.3-5.20221126.fc38.noarch 62/153 Verifying : ncurses-libs-6.3-5.20221126.fc38.i686 63/153 Verifying : nettle-3.8-2.fc38.i686 64/153 Verifying : openldap-2.6.3-1.fc38.i686 65/153 Verifying : openssl-libs-1:3.0.5-6.fc38.i686 66/153 Verifying : p11-kit-0.24.1-5.fc38.i686 67/153 Verifying : p11-kit-trust-0.24.1-5.fc38.i686 68/153 Verifying : pam-1.5.2-15.fc38.i686 69/153 Verifying : pam-libs-1.5.2-15.fc38.i686 70/153 Verifying : patch-2.7.6-17.fc38.i686 71/153 Verifying : pcre2-10.40-1.fc38.1.i686 72/153 Verifying : pcre2-syntax-10.40-1.fc38.1.noarch 73/153 Verifying : pkgconf-1.8.0-3.fc38.i686 74/153 Verifying : pkgconf-m4-1.8.0-3.fc38.noarch 75/153 Verifying : pkgconf-pkg-config-1.8.0-3.fc38.i686 76/153 Verifying : popt-1.19-1.fc38.i686 77/153 Verifying : qt5-srpm-macros-5.15.7-1.fc38.noarch 78/153 Verifying : readline-8.2-2.fc38.i686 79/153 Verifying : rpm-4.18.0-8.fc38.i686 80/153 Verifying : rpm-build-4.18.0-8.fc38.i686 81/153 Verifying : rpm-build-libs-4.18.0-8.fc38.i686 82/153 Verifying : rpm-libs-4.18.0-8.fc38.i686 83/153 Verifying : rpm-sequoia-1.2.0-1.fc38.i686 84/153 Verifying : rpmautospec-rpm-macros-0.3.1-1.fc38.noarch 85/153 Verifying : sed-4.8-11.fc38.i686 86/153 Verifying : shadow-utils-2:4.13-3.fc38.i686 87/153 Verifying : libgcc-13.0.0-0.4.fc38.i686 88/153 Verifying : libgomp-13.0.0-0.4.fc38.i686 89/153 Verifying : libstdc++-13.0.0-0.4.fc38.i686 90/153 Verifying : ansible-srpm-macros-1-8.1.fc38.noarch 91/153 Verifying : audit-libs-3.0.9-2.fc38.i686 92/153 Verifying : basesystem-11-14.fc37.noarch 93/153 Verifying : ca-certificates-2022.2.54-5.fc37.noarch 94/153 Verifying : crypto-policies-20221215-1.gita4c31a3.fc38.noarc 95/153 Verifying : debugedit-5.0-5.fc37.i686 96/153 Verifying : efi-srpm-macros-5-6.fc37.noarch 97/153 Verifying : fedora-gpg-keys-38-0.3.noarch 98/153 Verifying : fedora-release-38-0.6.noarch 99/153 Verifying : fedora-release-common-38-0.6.noarch 100/153 Verifying : fedora-release-identity-basic-38-0.6.noarch 101/153 Verifying : fedora-repos-38-0.3.noarch 102/153 Verifying : fedora-repos-rawhide-38-0.3.noarch 103/153 Verifying : filesystem-3.18-2.fc37.i686 104/153 Verifying : fonts-srpm-macros-1:2.0.5-10.fc38.noarch 105/153 Verifying : fpc-srpm-macros-1.3-6.fc37.noarch 106/153 Verifying : gdb-minimal-12.1-10.fc38.i686 107/153 Verifying : ghc-srpm-macros-1.5.0-7.fc37.noarch 108/153 Verifying : glibc-2.36.9000-19.fc38.i686 109/153 Verifying : glibc-common-2.36.9000-19.fc38.i686 110/153 Verifying : glibc-gconv-extra-2.36.9000-19.fc38.i686 111/153 Verifying : glibc-minimal-langpack-2.36.9000-19.fc38.i686 112/153 Verifying : gnat-srpm-macros-4-16.fc37.noarch 113/153 Verifying : go-srpm-macros-3.2.0-1.fc38.noarch 114/153 Verifying : info-7.0.1-1.fc38.i686 115/153 Verifying : kernel-srpm-macros-1.0-15.fc37.noarch 116/153 Verifying : libblkid-2.38.1-3.fc38.i686 117/153 Verifying : libcom_err-1.46.5-3.fc37.i686 118/153 Verifying : libfdisk-2.38.1-3.fc38.i686 119/153 Verifying : libmount-2.38.1-3.fc38.i686 120/153 Verifying : libpsl-0.21.2-1.fc38.i686 121/153 Verifying : libpwquality-1.4.5-1.fc38.i686 122/153 Verifying : libselinux-3.5-0.rc1.1.fc38.i686 123/153 Verifying : libsemanage-3.5-0.rc1.1.fc38.i686 124/153 Verifying : libsepol-3.5-0.rc1.1.fc38.i686 125/153 Verifying : libsmartcols-2.38.1-3.fc38.i686 126/153 Verifying : libuuid-2.38.1-3.fc38.i686 127/153 Verifying : libzstd-1.5.2-3.fc37.i686 128/153 Verifying : lua-srpm-macros-1-7.fc37.noarch 129/153 Verifying : nim-srpm-macros-3-7.fc37.noarch 130/153 Verifying : ocaml-srpm-macros-7-2.fc37.noarch 131/153 Verifying : openblas-srpm-macros-2-12.fc37.noarch 132/153 Verifying : package-notes-srpm-macros-0.5-6.fc38.noarch 133/153 Verifying : perl-srpm-macros-1-47.fc38.noarch 134/153 Verifying : publicsuffix-list-dafsa-20221208-1.fc38.noarch 135/153 Verifying : python-srpm-macros-3.11-6.fc38.noarch 136/153 Verifying : redhat-rpm-config-236-1.fc38.noarch 137/153 Verifying : rust-srpm-macros-23-1.fc38.noarch 138/153 Verifying : setup-2.14.3-1.fc38.noarch 139/153 Verifying : sqlite-libs-3.40.0-1.fc38.i686 140/153 Verifying : systemd-libs-252.4-598.fc38.i686 141/153 Verifying : tar-2:1.34-5.fc38.i686 142/153 Verifying : tzdata-2022g-1.fc38.noarch 143/153 Verifying : unzip-6.0-58.fc38.i686 144/153 Verifying : util-linux-2.38.1-3.fc38.i686 145/153 Verifying : util-linux-core-2.38.1-3.fc38.i686 146/153 Verifying : which-2.21-36.fc38.i686 147/153 Verifying : xxhash-libs-0.8.1-3.fc37.i686 148/153 Verifying : xz-5.2.9-1.fc38.i686 149/153 Verifying : xz-libs-5.2.9-1.fc38.i686 150/153 Verifying : zip-3.0-35.fc38.i686 151/153 Verifying : zlib-1.2.13-1.fc38.i686 152/153 Verifying : zstd-1.5.2-3.fc37.i686 153/153 Installed: alternatives-1.21-1.fc38.i686 ansible-srpm-macros-1-8.1.fc38.noarch audit-libs-3.0.9-2.fc38.i686 authselect-1.4.2-1.fc38.i686 authselect-libs-1.4.2-1.fc38.i686 basesystem-11-14.fc37.noarch bash-5.2.9-3.fc38.i686 binutils-2.39-6.fc38.i686 binutils-gold-2.39-6.fc38.i686 bzip2-1.0.8-12.fc38.i686 bzip2-libs-1.0.8-12.fc38.i686 ca-certificates-2022.2.54-5.fc37.noarch coreutils-9.1-8.fc38.i686 coreutils-common-9.1-8.fc38.i686 cpio-2.13-13.fc38.i686 cracklib-2.9.7-30.fc38.i686 crypto-policies-20221215-1.gita4c31a3.fc38.noarch curl-7.87.0-1.fc38.i686 cyrus-sasl-lib-2.1.28-8.fc38.i686 debugedit-5.0-5.fc37.i686 diffutils-3.8-3.fc38.i686 dwz-0.15-1.fc38.i686 ed-1.18-2.fc38.i686 efi-srpm-macros-5-6.fc37.noarch elfutils-0.188-3.fc38.i686 elfutils-debuginfod-client-0.188-3.fc38.i686 elfutils-default-yama-scope-0.188-3.fc38.noarch elfutils-libelf-0.188-3.fc38.i686 elfutils-libs-0.188-3.fc38.i686 fedora-gpg-keys-38-0.3.noarch fedora-release-38-0.6.noarch fedora-release-common-38-0.6.noarch fedora-release-identity-basic-38-0.6.noarch fedora-repos-38-0.3.noarch fedora-repos-rawhide-38-0.3.noarch file-5.42-4.fc38.i686 file-libs-5.42-4.fc38.i686 filesystem-3.18-2.fc37.i686 findutils-1:4.9.0-2.fc38.i686 fonts-srpm-macros-1:2.0.5-10.fc38.noarch fpc-srpm-macros-1.3-6.fc37.noarch gawk-5.1.1-4.fc38.i686 gdb-minimal-12.1-10.fc38.i686 gdbm-libs-1:1.23-2.fc38.i686 ghc-srpm-macros-1.5.0-7.fc37.noarch glibc-2.36.9000-19.fc38.i686 glibc-common-2.36.9000-19.fc38.i686 glibc-gconv-extra-2.36.9000-19.fc38.i686 glibc-minimal-langpack-2.36.9000-19.fc38.i686 gmp-1:6.2.1-3.fc38.i686 gnat-srpm-macros-4-16.fc37.noarch go-srpm-macros-3.2.0-1.fc38.noarch grep-3.8-1.fc38.i686 gzip-1.12-2.fc38.i686 info-7.0.1-1.fc38.i686 jansson-2.13.1-5.fc38.i686 kernel-srpm-macros-1.0-15.fc37.noarch keyutils-libs-1.6.1-5.fc38.i686 krb5-libs-1.20.1-3.fc38.i686 libacl-2.3.1-4.fc38.i686 libarchive-3.6.1-3.fc38.i686 libattr-2.5.1-5.fc38.i686 libblkid-2.38.1-3.fc38.i686 libbrotli-1.0.9-9.fc38.i686 libcap-2.48-5.fc38.i686 libcap-ng-0.8.3-4.fc38.i686 libcom_err-1.46.5-3.fc37.i686 libcurl-7.87.0-1.fc38.i686 libdb-5.3.28-54.fc38.i686 libeconf-0.4.0-4.fc38.i686 libevent-2.1.12-7.fc38.i686 libfdisk-2.38.1-3.fc38.i686 libffi-3.4.4-1.fc38.i686 libgcc-13.0.0-0.4.fc38.i686 libgomp-13.0.0-0.4.fc38.i686 libidn2-2.3.4-1.fc38.i686 libmount-2.38.1-3.fc38.i686 libnghttp2-1.51.0-1.fc38.i686 libnsl2-2.0.0-4.fc38.i686 libpkgconf-1.8.0-3.fc38.i686 libpsl-0.21.2-1.fc38.i686 libpwquality-1.4.5-1.fc38.i686 libselinux-3.5-0.rc1.1.fc38.i686 libsemanage-3.5-0.rc1.1.fc38.i686 libsepol-3.5-0.rc1.1.fc38.i686 libsigsegv-2.14-3.fc38.i686 libsmartcols-2.38.1-3.fc38.i686 libssh-0.10.4-2.fc38.i686 libssh-config-0.10.4-2.fc38.noarch libstdc++-13.0.0-0.4.fc38.i686 libtasn1-4.19.0-1.fc38.i686 libtirpc-1.3.3-0.fc38.i686 libunistring-1.0-2.fc38.i686 libutempter-1.2.1-7.fc38.i686 libuuid-2.38.1-3.fc38.i686 libverto-0.3.2-4.fc38.i686 libxcrypt-4.4.33-5.fc38.i686 libxml2-2.10.3-2.fc38.i686 libzstd-1.5.2-3.fc37.i686 lua-libs-5.4.4-6.fc38.i686 lua-srpm-macros-1-7.fc37.noarch lz4-libs-1.9.3-5.fc38.i686 mpfr-4.1.1-2.fc38.i686 ncurses-base-6.3-5.20221126.fc38.noarch ncurses-libs-6.3-5.20221126.fc38.i686 nettle-3.8-2.fc38.i686 nim-srpm-macros-3-7.fc37.noarch ocaml-srpm-macros-7-2.fc37.noarch openblas-srpm-macros-2-12.fc37.noarch openldap-2.6.3-1.fc38.i686 openssl-libs-1:3.0.5-6.fc38.i686 p11-kit-0.24.1-5.fc38.i686 p11-kit-trust-0.24.1-5.fc38.i686 package-notes-srpm-macros-0.5-6.fc38.noarch pam-1.5.2-15.fc38.i686 pam-libs-1.5.2-15.fc38.i686 patch-2.7.6-17.fc38.i686 pcre2-10.40-1.fc38.1.i686 pcre2-syntax-10.40-1.fc38.1.noarch perl-srpm-macros-1-47.fc38.noarch pkgconf-1.8.0-3.fc38.i686 pkgconf-m4-1.8.0-3.fc38.noarch pkgconf-pkg-config-1.8.0-3.fc38.i686 popt-1.19-1.fc38.i686 publicsuffix-list-dafsa-20221208-1.fc38.noarch python-srpm-macros-3.11-6.fc38.noarch qt5-srpm-macros-5.15.7-1.fc38.noarch readline-8.2-2.fc38.i686 redhat-rpm-config-236-1.fc38.noarch rpm-4.18.0-8.fc38.i686 rpm-build-4.18.0-8.fc38.i686 rpm-build-libs-4.18.0-8.fc38.i686 rpm-libs-4.18.0-8.fc38.i686 rpm-sequoia-1.2.0-1.fc38.i686 rpmautospec-rpm-macros-0.3.1-1.fc38.noarch rust-srpm-macros-23-1.fc38.noarch sed-4.8-11.fc38.i686 setup-2.14.3-1.fc38.noarch shadow-utils-2:4.13-3.fc38.i686 sqlite-libs-3.40.0-1.fc38.i686 systemd-libs-252.4-598.fc38.i686 tar-2:1.34-5.fc38.i686 tzdata-2022g-1.fc38.noarch unzip-6.0-58.fc38.i686 util-linux-2.38.1-3.fc38.i686 util-linux-core-2.38.1-3.fc38.i686 which-2.21-36.fc38.i686 xxhash-libs-0.8.1-3.fc37.i686 xz-5.2.9-1.fc38.i686 xz-libs-5.2.9-1.fc38.i686 zip-3.0-35.fc38.i686 zlib-1.2.13-1.fc38.i686 zstd-1.5.2-3.fc37.i686 Complete! Finish: dnf install Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: glibc-minimal-langpack-2.36.9000-19.fc38.i686 rpm-libs-4.18.0-8.fc38.i686 libpsl-0.21.2-1.fc38.i686 ansible-srpm-macros-1-8.1.fc38.noarch file-5.42-4.fc38.i686 libattr-2.5.1-5.fc38.i686 crypto-policies-20221215-1.gita4c31a3.fc38.noarch libxml2-2.10.3-2.fc38.i686 util-linux-2.38.1-3.fc38.i686 ghc-srpm-macros-1.5.0-7.fc37.noarch popt-1.19-1.fc38.i686 libcap-ng-0.8.3-4.fc38.i686 sed-4.8-11.fc38.i686 info-7.0.1-1.fc38.i686 libblkid-2.38.1-3.fc38.i686 filesystem-3.18-2.fc37.i686 bzip2-libs-1.0.8-12.fc38.i686 readline-8.2-2.fc38.i686 libutempter-1.2.1-7.fc38.i686 mpfr-4.1.1-2.fc38.i686 grep-3.8-1.fc38.i686 rpm-sequoia-1.2.0-1.fc38.i686 python-srpm-macros-3.11-6.fc38.noarch lua-libs-5.4.4-6.fc38.i686 libtasn1-4.19.0-1.fc38.i686 fedora-release-common-38-0.6.noarch ca-certificates-2022.2.54-5.fc37.noarch tar-1.34-5.fc38.i686 gdb-minimal-12.1-10.fc38.i686 libsepol-3.5-0.rc1.1.fc38.i686 fpc-srpm-macros-1.3-6.fc37.noarch libmount-2.38.1-3.fc38.i686 pcre2-10.40-1.fc38.1.i686 keyutils-libs-1.6.1-5.fc38.i686 bzip2-1.0.8-12.fc38.i686 fedora-gpg-keys-38-0.3.noarch redhat-rpm-config-236-1.fc38.noarch setup-2.14.3-1.fc38.noarch libcom_err-1.46.5-3.fc37.i686 libidn2-2.3.4-1.fc38.i686 alternatives-1.21-1.fc38.i686 libbrotli-1.0.9-9.fc38.i686 rust-srpm-macros-23-1.fc38.noarch libunistring-1.0-2.fc38.i686 libssh-config-0.10.4-2.fc38.noarch libnsl2-2.0.0-4.fc38.i686 p11-kit-0.24.1-5.fc38.i686 curl-7.87.0-1.fc38.i686 elfutils-default-yama-scope-0.188-3.fc38.noarch libarchive-3.6.1-3.fc38.i686 libzstd-1.5.2-3.fc37.i686 util-linux-core-2.38.1-3.fc38.i686 binutils-2.39-6.fc38.i686 libpkgconf-1.8.0-3.fc38.i686 libuuid-2.38.1-3.fc38.i686 libsigsegv-2.14-3.fc38.i686 authselect-libs-1.4.2-1.fc38.i686 coreutils-common-9.1-8.fc38.i686 elfutils-debuginfod-client-0.188-3.fc38.i686 xz-libs-5.2.9-1.fc38.i686 audit-libs-3.0.9-2.fc38.i686 pam-libs-1.5.2-15.fc38.i686 fonts-srpm-macros-2.0.5-10.fc38.noarch efi-srpm-macros-5-6.fc37.noarch libacl-2.3.1-4.fc38.i686 libselinux-3.5-0.rc1.1.fc38.i686 bash-5.2.9-3.fc38.i686 fedora-release-identity-basic-38-0.6.noarch pcre2-syntax-10.40-1.fc38.1.noarch fedora-repos-38-0.3.noarch libfdisk-2.38.1-3.fc38.i686 elfutils-0.188-3.fc38.i686 gawk-5.1.1-4.fc38.i686 shadow-utils-4.13-3.fc38.i686 libevent-2.1.12-7.fc38.i686 debugedit-5.0-5.fc37.i686 rpmautospec-rpm-macros-0.3.1-1.fc38.noarch glibc-gconv-extra-2.36.9000-19.fc38.i686 pkgconf-1.8.0-3.fc38.i686 fedora-repos-rawhide-38-0.3.noarch which-2.21-36.fc38.i686 qt5-srpm-macros-5.15.7-1.fc38.noarch jansson-2.13.1-5.fc38.i686 ed-1.18-2.fc38.i686 rpm-build-4.18.0-8.fc38.i686 libssh-0.10.4-2.fc38.i686 gmp-6.2.1-3.fc38.i686 lua-srpm-macros-1-7.fc37.noarch binutils-gold-2.39-6.fc38.i686 gzip-1.12-2.fc38.i686 xxhash-libs-0.8.1-3.fc37.i686 libstdc++-13.0.0-0.4.fc38.i686 ncurses-base-6.3-5.20221126.fc38.noarch libdb-5.3.28-54.fc38.i686 file-libs-5.42-4.fc38.i686 fedora-release-38-0.6.noarch coreutils-9.1-8.fc38.i686 krb5-libs-1.20.1-3.fc38.i686 pam-1.5.2-15.fc38.i686 libcurl-7.87.0-1.fc38.i686 tzdata-2022g-1.fc38.noarch libffi-3.4.4-1.fc38.i686 cracklib-2.9.7-30.fc38.i686 dwz-0.15-1.fc38.i686 go-srpm-macros-3.2.0-1.fc38.noarch package-notes-srpm-macros-0.5-6.fc38.noarch patch-2.7.6-17.fc38.i686 libgcc-13.0.0-0.4.fc38.i686 openldap-2.6.3-1.fc38.i686 findutils-4.9.0-2.fc38.i686 ocaml-srpm-macros-7-2.fc37.noarch pkgconf-pkg-config-1.8.0-3.fc38.i686 libtirpc-1.3.3-0.fc38.i686 zstd-1.5.2-3.fc37.i686 diffutils-3.8-3.fc38.i686 openblas-srpm-macros-2-12.fc37.noarch basesystem-11-14.fc37.noarch gdbm-libs-1.23-2.fc38.i686 p11-kit-trust-0.24.1-5.fc38.i686 glibc-2.36.9000-19.fc38.i686 libsmartcols-2.38.1-3.fc38.i686 unzip-6.0-58.fc38.i686 libsemanage-3.5-0.rc1.1.fc38.i686 lz4-libs-1.9.3-5.fc38.i686 libpwquality-1.4.5-1.fc38.i686 rpm-4.18.0-8.fc38.i686 sqlite-libs-3.40.0-1.fc38.i686 systemd-libs-252.4-598.fc38.i686 libverto-0.3.2-4.fc38.i686 nim-srpm-macros-3-7.fc37.noarch elfutils-libs-0.188-3.fc38.i686 zip-3.0-35.fc38.i686 cpio-2.13-13.fc38.i686 libgomp-13.0.0-0.4.fc38.i686 ncurses-libs-6.3-5.20221126.fc38.i686 kernel-srpm-macros-1.0-15.fc37.noarch publicsuffix-list-dafsa-20221208-1.fc38.noarch xz-5.2.9-1.fc38.i686 nettle-3.8-2.fc38.i686 zlib-1.2.13-1.fc38.i686 pkgconf-m4-1.8.0-3.fc38.noarch cyrus-sasl-lib-2.1.28-8.fc38.i686 gnat-srpm-macros-4-16.fc37.noarch glibc-common-2.36.9000-19.fc38.i686 libeconf-0.4.0-4.fc38.i686 libxcrypt-4.4.33-5.fc38.i686 libnghttp2-1.51.0-1.fc38.i686 openssl-libs-3.0.5-6.fc38.i686 rpm-build-libs-4.18.0-8.fc38.i686 authselect-1.4.2-1.fc38.i686 elfutils-libelf-0.188-3.fc38.i686 perl-srpm-macros-1-47.fc38.noarch libcap-2.48-5.fc38.i686 Start: buildsrpm Start: rpmbuild -bs Building target platforms: i686 Building for target i686 setting SOURCE_DATE_EPOCH=1658534400 Wrote: /builddir/build/SRPMS/smoldyn-2.67.3-3.fc38.src.rpm Finish: rpmbuild -bs cp: ‘var/lib/mock/fedora-rawhide-i686-1672332313.507491/root/var/log’: No such file or directory INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-i686-1672332313.507491/root/var/log/dnf.rpm.log /var/lib/mock/fedora-rawhide-i686-1672332313.507491/root/var/log/dnf.librepo.log /var/lib/mock/fedora-rawhide-i686-1672332313.507491/root/var/log/dnf.log Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-9jv_nypz/smoldyn/smoldyn.spec) Config(child) 1 minutes 10 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running (timeout=115200): unbuffer mock --rebuild /var/lib/copr-rpmbuild/results/smoldyn-2.67.3-3.fc38.src.rpm --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1672332313.507491 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 3.5 starting (python version = 3.11.0, NVR = mock-3.5-1.fc37)... Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/results/smoldyn-2.67.3-3.fc38.src.rpm) Config(fedora-rawhide-i686) Start: clean chroot Finish: clean chroot Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-i686-bootstrap-1672332313.507491/root. INFO: reusing tmpfs at /var/lib/mock/fedora-rawhide-i686-bootstrap-1672332313.507491/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: enabled HW Info plugin Mock Version: 3.5 INFO: Mock Version: 3.5 Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-i686-1672332313.507491/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin Mock Version: 3.5 INFO: Mock Version: 3.5 Start: dnf update No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 10 kB/s | 3.0 kB 00:00 Copr repository 35 MB/s | 37 MB 00:01 Additional repo https_jakub_fedorapeople_org_fe 2.0 kB/s | 3.0 kB 00:01 local 13 kB/s | 3.8 kB 00:00 Dependencies resolved. Nothing to do. Complete! Finish: dnf update Finish: chroot init Start: build phase for smoldyn-2.67.3-3.fc38.src.rpm Start: build setup for smoldyn-2.67.3-3.fc38.src.rpm Building target platforms: i686 Building for target i686 setting SOURCE_DATE_EPOCH=1658534400 Wrote: /builddir/build/SRPMS/smoldyn-2.67.3-3.fc38.src.rpm No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 12 kB/s | 3.0 kB 00:00 Additional repo https_jakub_fedorapeople_org_fe 10 kB/s | 3.0 kB 00:00 local 14 kB/s | 3.8 kB 00:00 Dependencies resolved. ============================================================================================================================= Package Arch Version Repository Size ============================================================================================================================= Installing: boost-devel i686 1.78.0-9.fc38 copr_base 11 M cmake i686 3.25.1-1.fc38 copr_base 7.4 M freeglut-devel i686 3.4.0-1.fc38 copr_base 891 k gcc i686 13.0.0-0.4.fc38 https_jakub_fedorapeople_org_fedora_gcc13_arch 34 M gcc-c++ i686 13.0.0-0.4.fc38 https_jakub_fedorapeople_org_fedora_gcc13_arch 13 M libXi-devel i686 1.8-3.fc38 copr_base 103 k libXmu-devel i686 1.1.4-1.fc38 copr_base 23 k libglvnd-devel i686 1:1.6.0-1.fc38 copr_base 158 k libtiff-devel i686 4.4.0-4.fc38 copr_base 514 k make i686 1:4.3-11.fc38 copr_base 542 k perl-macros noarch 4:5.36.0-492.fc38 copr_base 15 k pybind11-devel i686 2.10.1-1.fc38 copr_base 161 k python3-devel i686 3.11.1-1.fc38 copr_base 235 k python3-flaky noarch 3.7.0-9.fc37 local 40 k python3-matplotlib i686 3.6.2-4.fc38 copr_base 4.0 M python3-setuptools noarch 65.5.1-1.fc38 local 1.5 M python3-wheel noarch 1:0.38.4-1.fc38 copr_base 93 k xorg-x11-server-Xvfb i686 1.20.14-12.fc38 local 949 k zlib-devel i686 1.2.13-1.fc38 local 45 k Installing dependencies: annobin-docs noarch 10.99-1.0.1.fc38 https_jakub_fedorapeople_org_fedora_gcc13_arch 93 k annobin-plugin-gcc i686 10.99-1.0.1.fc38 https_jakub_fedorapeople_org_fedora_gcc13_arch 889 k boost i686 1.78.0-9.fc38 copr_base 15 k boost-atomic i686 1.78.0-9.fc38 copr_base 20 k boost-chrono i686 1.78.0-9.fc38 copr_base 29 k boost-container i686 1.78.0-9.fc38 copr_base 41 k boost-context i686 1.78.0-9.fc38 copr_base 18 k boost-contract i686 1.78.0-9.fc38 copr_base 50 k boost-coroutine i686 1.78.0-9.fc38 copr_base 24 k boost-date-time i686 1.78.0-9.fc38 copr_base 17 k boost-fiber i686 1.78.0-9.fc38 copr_base 45 k boost-filesystem i686 1.78.0-9.fc38 copr_base 71 k boost-graph i686 1.78.0-9.fc38 copr_base 158 k boost-iostreams i686 1.78.0-9.fc38 copr_base 45 k boost-json i686 1.78.0-9.fc38 copr_base 123 k boost-locale i686 1.78.0-9.fc38 copr_base 243 k boost-log i686 1.78.0-9.fc38 copr_base 531 k boost-math i686 1.78.0-9.fc38 copr_base 202 k boost-nowide i686 1.78.0-9.fc38 copr_base 22 k boost-numpy3 i686 1.78.0-9.fc38 copr_base 31 k boost-program-options i686 1.78.0-9.fc38 copr_base 117 k boost-python3 i686 1.78.0-9.fc38 copr_base 104 k boost-random i686 1.78.0-9.fc38 copr_base 27 k boost-regex i686 1.78.0-9.fc38 copr_base 117 k boost-serialization i686 1.78.0-9.fc38 copr_base 145 k boost-stacktrace i686 1.78.0-9.fc38 copr_base 32 k boost-system i686 1.78.0-9.fc38 copr_base 16 k boost-test i686 1.78.0-9.fc38 copr_base 257 k boost-thread i686 1.78.0-9.fc38 copr_base 65 k boost-timer i686 1.78.0-9.fc38 copr_base 28 k boost-type_erasure i686 1.78.0-9.fc38 copr_base 37 k boost-wave i686 1.78.0-9.fc38 copr_base 231 k cairo i686 1.17.6-2.fc38 copr_base 720 k cmake-data noarch 3.25.1-1.fc38 copr_base 1.7 M cmake-filesystem i686 3.25.1-1.fc38 copr_base 17 k cmake-rpm-macros noarch 3.25.1-1.fc38 copr_base 17 k cpp i686 13.0.0-0.4.fc38 https_jakub_fedorapeople_org_fedora_gcc13_arch 11 M dejavu-sans-fonts noarch 2.37-19.fc37 local 1.3 M emacs-filesystem noarch 1:28.1-3.fc37 local 9.5 k expat i686 2.5.0-1.fc38 copr_base 115 k flexiblas i686 3.2.1-3.fc38 local 32 k flexiblas-netlib i686 3.2.1-3.fc38 local 3.0 M flexiblas-openblas-openmp i686 3.2.1-3.fc38 local 17 k fontconfig i686 2.14.1-2.fc38 copr_base 292 k fonts-filesystem noarch 1:2.0.5-10.fc38 local 8.0 k freeglut i686 3.4.0-1.fc38 copr_base 155 k freetype i686 2.12.1-3.fc38 copr_base 418 k fribidi i686 1.0.12-2.fc38 copr_base 90 k gc i686 8.2.2-1.fc38 copr_base 113 k gcc-plugin-annobin i686 13.0.0-0.4.fc38 https_jakub_fedorapeople_org_fedora_gcc13_arch 30 k gl-manpages noarch 1.1-25.20190306.fc37 local 1.0 M glib2 i686 2.74.1-2.fc38 copr_base 2.8 M glibc-devel i686 2.36.9000-19.fc38 local 43 k glibc-headers-x86 noarch 2.36.9000-19.fc38 local 450 k gnutls i686 3.7.8-9.fc38 copr_base 1.1 M google-noto-fonts-common noarch 20201206^1.git0c78c8329-9.fc38 local 18 k google-noto-sans-vf-fonts noarch 20201206^1.git0c78c8329-9.fc38 local 729 k graphite2 i686 1.3.14-10.fc38 copr_base 97 k groff-base i686 1.22.4-10.fc38 copr_base 1.0 M guile22 i686 2.2.7-6.fc38 copr_base 6.5 M harfbuzz i686 6.0.0-1.fc38 copr_base 846 k hwdata noarch 0.365-1.fc38 local 1.5 M jbigkit-libs i686 2.1-24.fc38 copr_base 54 k jsoncpp i686 1.9.5-3.fc38 copr_base 107 k kernel-headers i686 6.1.0-1.fc38 local 1.4 M langpacks-core-font-en noarch 3.0-27.fc38 local 9.9 k lcms2 i686 2.14-1.fc38 copr_base 193 k libICE i686 1.0.10-9.fc38 copr_base 74 k libICE-devel i686 1.0.10-9.fc38 copr_base 46 k libSM i686 1.2.3-11.fc38 copr_base 42 k libSM-devel i686 1.2.3-11.fc38 copr_base 12 k libX11 i686 1.8.1-2.fc38 copr_base 672 k libX11-common noarch 1.8.1-2.fc38 copr_base 150 k libX11-devel i686 1.8.1-2.fc38 copr_base 939 k libX11-xcb i686 1.8.1-2.fc38 copr_base 12 k libXau i686 1.0.11-1.fc38 copr_base 32 k libXau-devel i686 1.0.11-1.fc38 copr_base 14 k libXdmcp i686 1.1.3-9.fc38 copr_base 36 k libXext i686 1.3.5-1.fc38 copr_base 42 k libXext-devel i686 1.3.5-1.fc38 copr_base 72 k libXfixes i686 6.0.0-4.fc38 copr_base 20 k libXfixes-devel i686 6.0.0-4.fc38 copr_base 13 k libXfont2 i686 2.0.3-13.fc38 copr_base 144 k libXft i686 2.3.6-1.fc38 copr_base 73 k libXi i686 1.8-3.fc38 copr_base 42 k libXmu i686 1.1.4-1.fc38 copr_base 80 k libXrender i686 0.9.11-1.fc38 copr_base 29 k libXt i686 1.2.1-3.fc38 copr_base 189 k libXt-devel i686 1.2.1-3.fc38 copr_base 408 k libXxf86vm i686 1.1.5-1.fc38 copr_base 19 k libasan i686 13.0.0-0.4.fc38 https_jakub_fedorapeople_org_fedora_gcc13_arch 491 k libatomic i686 13.0.0-0.4.fc38 https_jakub_fedorapeople_org_fedora_gcc13_arch 17 k libb2 i686 0.98.1-7.fc38 copr_base 29 k libdrm i686 2.4.114-1.fc38 copr_base 173 k libdrm-devel i686 2.4.114-1.fc38 copr_base 164 k libfontenc i686 1.1.6-1.fc38 copr_base 32 k libgfortran i686 13.0.0-0.4.fc38 https_jakub_fedorapeople_org_fedora_gcc13_arch 825 k libglvnd i686 1:1.6.0-1.fc38 copr_base 126 k libglvnd-core-devel i686 1:1.6.0-1.fc38 copr_base 18 k libglvnd-egl i686 1:1.6.0-1.fc38 copr_base 38 k libglvnd-gles i686 1:1.6.0-1.fc38 copr_base 30 k libglvnd-glx i686 1:1.6.0-1.fc38 copr_base 139 k libglvnd-opengl i686 1:1.6.0-1.fc38 copr_base 40 k libicu i686 71.1-2.fc38 copr_base 10 M libicu-devel i686 71.1-2.fc38 copr_base 843 k libimagequant i686 2.17.0-3.fc38 copr_base 66 k libjpeg-turbo i686 2.1.4-1.fc38 copr_base 198 k libmpc i686 1.2.1-5.fc38 copr_base 66 k libpciaccess i686 0.16-7.fc38 copr_base 30 k libpciaccess-devel i686 0.16-7.fc38 copr_base 13 k libpng i686 2:1.6.37-13.fc38 copr_base 129 k libqhull_r i686 1:7.2.1-11.fc38 copr_base 181 k libquadmath i686 13.0.0-0.4.fc38 https_jakub_fedorapeople_org_fedora_gcc13_arch 225 k libquadmath-devel i686 13.0.0-0.4.fc38 https_jakub_fedorapeople_org_fedora_gcc13_arch 20 k libraqm i686 0.8.0-2.fc38 copr_base 21 k libstdc++-devel i686 13.0.0-0.4.fc38 https_jakub_fedorapeople_org_fedora_gcc13_arch 2.4 M libtiff i686 4.4.0-4.fc38 copr_base 215 k libtool-ltdl i686 2.4.7-3.0.1.fc38 https_jakub_fedorapeople_org_fedora_gcc13_arch 39 k libubsan i686 13.0.0-0.4.fc38 https_jakub_fedorapeople_org_fedora_gcc13_arch 219 k libunwind i686 1.6.2-5.fc38 copr_base 66 k libuv i686 1:1.44.2-2.fc38 copr_base 159 k libwayland-client i686 1.21.0-1.fc37 local 33 k libwayland-server i686 1.21.0-1.fc37 local 43 k libwebp i686 1.2.4-2.fc38 copr_base 290 k libxcb i686 1.13.1-10.fc38 copr_base 247 k libxcb-devel i686 1.13.1-10.fc38 copr_base 1.0 M libxcrypt-devel i686 4.4.33-5.fc38 copr_base 31 k libxkbfile i686 1.1.1-1.fc38 copr_base 95 k libxshmfence i686 1.3-11.fc38 copr_base 12 k libxslt i686 1.1.37-1.fc38 copr_base 198 k mesa-libEGL i686 22.3.1-1.fc38 copr_base 142 k mesa-libGL i686 22.3.1-1.fc38 copr_base 187 k mesa-libGL-devel i686 22.3.1-1.fc38 copr_base 36 k mesa-libGLU i686 9.0.1-7.fc38 copr_base 158 k mesa-libGLU-devel i686 9.0.1-7.fc38 copr_base 13 k mesa-libgbm i686 22.3.1-1.fc38 copr_base 47 k mesa-libglapi i686 22.3.1-1.fc38 copr_base 55 k mpdecimal i686 2.5.1-4.fc38 copr_base 107 k ncurses i686 6.3-5.20221126.fc38 copr_base 409 k openblas i686 0.3.21-4.fc38 copr_base 35 k openblas-openmp i686 0.3.21-4.fc38 copr_base 3.8 M openjpeg2 i686 2.5.0-2.fc38 copr_base 190 k perl-Carp noarch 1.52-489.fc37 local 29 k perl-Class-Struct noarch 0.66-492.fc38 copr_base 26 k perl-DynaLoader i686 1.52-492.fc38 copr_base 30 k perl-Encode i686 4:3.19-492.fc38 copr_base 1.2 M perl-Errno i686 1.36-492.fc38 copr_base 18 k perl-Exporter noarch 5.77-489.fc37 local 31 k perl-Fcntl i686 1.15-492.fc38 copr_base 24 k perl-File-Basename noarch 2.85-492.fc38 copr_base 21 k perl-File-Path noarch 2.18-489.fc37 local 35 k perl-File-Temp noarch 1:0.231.100-489.fc37 local 59 k perl-File-stat noarch 1.12-492.fc38 copr_base 21 k perl-Getopt-Long noarch 1:2.54-1.fc38 local 60 k perl-Getopt-Std noarch 1.13-492.fc38 copr_base 19 k perl-HTTP-Tiny noarch 0.082-1.fc37 local 55 k perl-IO i686 1.50-492.fc38 copr_base 92 k perl-IPC-Open3 noarch 1.22-492.fc38 copr_base 26 k perl-MIME-Base64 i686 3.16-489.fc38 copr_base 31 k perl-POSIX i686 2.03-492.fc38 copr_base 105 k perl-PathTools i686 3.84-489.fc38 copr_base 83 k perl-Pod-Escapes noarch 1:1.07-489.fc37 local 20 k perl-Pod-Perldoc noarch 3.28.01-490.fc37 local 84 k perl-Pod-Simple noarch 1:3.43-490.fc37 local 215 k perl-Pod-Usage noarch 4:2.03-3.fc37 local 40 k perl-Scalar-List-Utils i686 5:1.63-489.fc38 copr_base 75 k perl-SelectSaver noarch 1.02-492.fc38 copr_base 15 k perl-Socket i686 4:2.036-1.fc38 copr_base 56 k perl-Storable i686 1:3.26-489.fc38 copr_base 99 k perl-Symbol noarch 1.09-492.fc38 copr_base 18 k perl-Term-ANSIColor noarch 5.01-490.fc37 local 48 k perl-Term-Cap noarch 1.17-489.fc37 local 22 k perl-Text-ParseWords noarch 3.31-489.fc37 local 16 k perl-Text-Tabs+Wrap noarch 2021.0814-489.fc37 local 22 k perl-Time-Local noarch 2:1.300-489.fc37 local 33 k perl-constant noarch 1.33-490.fc37 local 23 k perl-if noarch 0.61.000-492.fc38 copr_base 18 k perl-interpreter i686 4:5.36.0-492.fc38 copr_base 76 k perl-libs i686 4:5.36.0-492.fc38 copr_base 2.2 M perl-mro i686 1.26-492.fc38 copr_base 33 k perl-overload noarch 1.35-492.fc38 copr_base 49 k perl-overloading noarch 0.02-492.fc38 copr_base 16 k perl-parent noarch 1:0.239-1.fc38 local 14 k perl-podlators noarch 1:5.00-1.fc38 local 122 k perl-vars noarch 1.05-492.fc38 copr_base 17 k pixman i686 0.40.0-6.fc38 copr_base 296 k pyproject-rpm-macros noarch 1.5.0-1.fc38 local 40 k python-pip-wheel noarch 22.3.1-1.fc38 local 1.4 M python-rpm-macros noarch 3.11-6.fc38 local 19 k python-setuptools-wheel noarch 65.5.1-1.fc38 local 715 k python3 i686 3.11.1-1.fc38 copr_base 28 k python3-appdirs noarch 1.4.4-7.fc37 local 24 k python3-brotli i686 1.0.9-9.fc38 copr_base 322 k python3-cairo i686 1.23.0-1.fc38 copr_base 129 k python3-contourpy i686 1.0.6-1.fc38 copr_base 235 k python3-cycler noarch 0.11.0-6.fc37 local 21 k python3-dateutil noarch 1:2.8.2-4.fc37 local 350 k python3-fonttools i686 4.38.0-1.fc38 copr_base 2.3 M python3-fs noarch 2.4.11-12.fc37 local 266 k python3-kiwisolver i686 1.4.4-1.fc38 copr_base 72 k python3-libs i686 3.11.1-1.fc38 copr_base 9.3 M python3-lxml i686 4.9.1-1.fc38 copr_base 1.2 M python3-matplotlib-data noarch 3.6.2-4.fc38 copr_base 527 k python3-matplotlib-data-fonts noarch 3.6.2-4.fc38 copr_base 2.3 M python3-matplotlib-tk i686 3.6.2-4.fc38 copr_base 54 k python3-munkres noarch 1.1.2-13.fc37 local 26 k python3-numpy i686 1:1.23.5-1.fc38 copr_base 7.5 M python3-numpy-f2py i686 1:1.23.5-1.fc38 copr_base 433 k python3-olefile noarch 0.46-18.fc37 local 67 k python3-packaging noarch 21.3-7.fc38 local 89 k python3-pillow i686 9.3.0-2.fc38 copr_base 876 k python3-pillow-tk i686 9.3.0-2.fc38 copr_base 31 k python3-pyparsing noarch 3.0.9-2.fc37 local 255 k python3-pytz noarch 2022.7-1.fc38 local 60 k python3-rpm-generators noarch 13-2.fc37 local 30 k python3-rpm-macros noarch 3.11-6.fc38 local 15 k python3-scipy i686 1.8.1-6.fc37 local 19 M python3-six noarch 1.16.0-8.fc37 local 42 k python3-tkinter i686 3.11.1-1.fc38 copr_base 394 k rhash i686 1.4.3-1.fc38 copr_base 211 k tcl i686 1:8.6.12-3.fc38 local 1.1 M tk i686 1:8.6.12-3.fc37 local 1.6 M vim-filesystem noarch 2:9.0.1054-1.fc38 local 19 k xkbcomp i686 1.4.6-4.fc38 local 103 k xkeyboard-config noarch 2.36-3.fc38 local 901 k xml-common noarch 0.6.3-59.fc37 local 31 k xorg-x11-proto-devel noarch 2022.2-2.fc38 local 264 k xorg-x11-server-common i686 1.20.14-12.fc38 local 34 k xorg-x11-xauth i686 1:1.1.2-2.fc37 local 36 k Transaction Summary ============================================================================================================================= Install 248 Packages Total size: 201 M Total download size: 73 M Installed size: 833 M Downloading Packages: [SKIPPED] cairo-1.17.6-2.fc38.i686.rpm: Already downloaded [SKIPPED] cmake-3.25.1-1.fc38.i686.rpm: Already downloaded [SKIPPED] cmake-data-3.25.1-1.fc38.noarch.rpm: Already downloaded [SKIPPED] cmake-filesystem-3.25.1-1.fc38.i686.rpm: Already downloaded [SKIPPED] cmake-rpm-macros-3.25.1-1.fc38.noarch.rpm: Already downloaded [SKIPPED] expat-2.5.0-1.fc38.i686.rpm: Already downloaded [SKIPPED] fontconfig-2.14.1-2.fc38.i686.rpm: Already downloaded [SKIPPED] freetype-2.12.1-3.fc38.i686.rpm: Already downloaded [SKIPPED] gc-8.2.2-1.fc38.i686.rpm: Already downloaded [SKIPPED] glib2-2.74.1-2.fc38.i686.rpm: Already downloaded [SKIPPED] gnutls-3.7.8-9.fc38.i686.rpm: Already downloaded [SKIPPED] graphite2-1.3.14-10.fc38.i686.rpm: Already downloaded [SKIPPED] groff-base-1.22.4-10.fc38.i686.rpm: Already downloaded [SKIPPED] guile22-2.2.7-6.fc38.i686.rpm: Already downloaded [SKIPPED] harfbuzz-6.0.0-1.fc38.i686.rpm: Already downloaded [SKIPPED] jbigkit-libs-2.1-24.fc38.i686.rpm: Already downloaded [SKIPPED] jsoncpp-1.9.5-3.fc38.i686.rpm: Already downloaded [SKIPPED] lcms2-2.14-1.fc38.i686.rpm: Already downloaded [SKIPPED] libICE-1.0.10-9.fc38.i686.rpm: Already downloaded [SKIPPED] libICE-devel-1.0.10-9.fc38.i686.rpm: Already downloaded [SKIPPED] libSM-1.2.3-11.fc38.i686.rpm: Already downloaded [SKIPPED] libSM-devel-1.2.3-11.fc38.i686.rpm: Already downloaded [SKIPPED] libX11-1.8.1-2.fc38.i686.rpm: Already downloaded [SKIPPED] libX11-common-1.8.1-2.fc38.noarch.rpm: Already downloaded [SKIPPED] libX11-devel-1.8.1-2.fc38.i686.rpm: Already downloaded [SKIPPED] libX11-xcb-1.8.1-2.fc38.i686.rpm: Already downloaded [SKIPPED] libXau-1.0.11-1.fc38.i686.rpm: Already downloaded [SKIPPED] libXau-devel-1.0.11-1.fc38.i686.rpm: Already downloaded [SKIPPED] libXext-1.3.5-1.fc38.i686.rpm: Already downloaded [SKIPPED] libXext-devel-1.3.5-1.fc38.i686.rpm: Already downloaded [SKIPPED] libXfixes-6.0.0-4.fc38.i686.rpm: Already downloaded [SKIPPED] libXfixes-devel-6.0.0-4.fc38.i686.rpm: Already downloaded [SKIPPED] libXft-2.3.6-1.fc38.i686.rpm: Already downloaded [SKIPPED] libXi-1.8-3.fc38.i686.rpm: Already downloaded [SKIPPED] libXi-devel-1.8-3.fc38.i686.rpm: Already downloaded [SKIPPED] libXrender-0.9.11-1.fc38.i686.rpm: Already downloaded [SKIPPED] libXt-1.2.1-3.fc38.i686.rpm: Already downloaded [SKIPPED] libXt-devel-1.2.1-3.fc38.i686.rpm: Already downloaded [SKIPPED] libXxf86vm-1.1.5-1.fc38.i686.rpm: Already downloaded [SKIPPED] libb2-0.98.1-7.fc38.i686.rpm: Already downloaded [SKIPPED] libdrm-2.4.114-1.fc38.i686.rpm: Already downloaded [SKIPPED] libglvnd-1.6.0-1.fc38.i686.rpm: Already downloaded [SKIPPED] libglvnd-core-devel-1.6.0-1.fc38.i686.rpm: Already downloaded [SKIPPED] libglvnd-devel-1.6.0-1.fc38.i686.rpm: Already downloaded [SKIPPED] libglvnd-egl-1.6.0-1.fc38.i686.rpm: Already downloaded [SKIPPED] libglvnd-gles-1.6.0-1.fc38.i686.rpm: Already downloaded [SKIPPED] libglvnd-glx-1.6.0-1.fc38.i686.rpm: Already downloaded [SKIPPED] libglvnd-opengl-1.6.0-1.fc38.i686.rpm: Already downloaded [SKIPPED] libicu-71.1-2.fc38.i686.rpm: Already downloaded [SKIPPED] libicu-devel-71.1-2.fc38.i686.rpm: Already downloaded [SKIPPED] libjpeg-turbo-2.1.4-1.fc38.i686.rpm: Already downloaded [SKIPPED] libmpc-1.2.1-5.fc38.i686.rpm: Already downloaded [SKIPPED] libpciaccess-0.16-7.fc38.i686.rpm: Already downloaded [SKIPPED] libpng-1.6.37-13.fc38.i686.rpm: Already downloaded [SKIPPED] libtiff-4.4.0-4.fc38.i686.rpm: Already downloaded [SKIPPED] libunwind-1.6.2-5.fc38.i686.rpm: 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Running transaction test Transaction test succeeded. Running transaction Preparing : 1/1 Installing : xorg-x11-proto-devel-2022.2-2.fc38.noarch 1/248 Installing : boost-system-1.78.0-9.fc38.i686 2/248 Installing : cmake-filesystem-3.25.1-1.fc38.i686 3/248 Installing : boost-chrono-1.78.0-9.fc38.i686 4/248 Installing : boost-thread-1.78.0-9.fc38.i686 5/248 Installing : libicu-71.1-2.fc38.i686 6/248 Installing : libglvnd-1:1.6.0-1.fc38.i686 7/248 Installing : expat-2.5.0-1.fc38.i686 8/248 Installing : libXau-1.0.11-1.fc38.i686 9/248 Installing : python-rpm-macros-3.11-6.fc38.noarch 10/248 Installing : fonts-filesystem-1:2.0.5-10.fc38.noarch 11/248 Installing : libxcb-1.13.1-10.fc38.i686 12/248 Installing : boost-regex-1.78.0-9.fc38.i686 13/248 Installing : libquadmath-13.0.0-0.4.fc38.i686 14/248 Installing : libgfortran-13.0.0-0.4.fc38.i686 15/248 Installing : pixman-0.40.0-6.fc38.i686 16/248 Installing : mesa-libglapi-22.3.1-1.fc38.i686 17/248 Installing : libmpc-1.2.1-5.fc38.i686 18/248 Installing : libX11-xcb-1.8.1-2.fc38.i686 19/248 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perl-Carp-1.52-489.fc37.noarch perl-Class-Struct-0.66-492.fc38.noarch perl-DynaLoader-1.52-492.fc38.i686 perl-Encode-4:3.19-492.fc38.i686 perl-Errno-1.36-492.fc38.i686 perl-Exporter-5.77-489.fc37.noarch perl-Fcntl-1.15-492.fc38.i686 perl-File-Basename-2.85-492.fc38.noarch perl-File-Path-2.18-489.fc37.noarch perl-File-Temp-1:0.231.100-489.fc37.noarch perl-File-stat-1.12-492.fc38.noarch perl-Getopt-Long-1:2.54-1.fc38.noarch perl-Getopt-Std-1.13-492.fc38.noarch perl-HTTP-Tiny-0.082-1.fc37.noarch perl-IO-1.50-492.fc38.i686 perl-IPC-Open3-1.22-492.fc38.noarch perl-MIME-Base64-3.16-489.fc38.i686 perl-POSIX-2.03-492.fc38.i686 perl-PathTools-3.84-489.fc38.i686 perl-Pod-Escapes-1:1.07-489.fc37.noarch perl-Pod-Perldoc-3.28.01-490.fc37.noarch perl-Pod-Simple-1:3.43-490.fc37.noarch perl-Pod-Usage-4:2.03-3.fc37.noarch perl-Scalar-List-Utils-5:1.63-489.fc38.i686 perl-SelectSaver-1.02-492.fc38.noarch perl-Socket-4:2.036-1.fc38.i686 perl-Storable-1:3.26-489.fc38.i686 perl-Symbol-1.09-492.fc38.noarch perl-Term-ANSIColor-5.01-490.fc37.noarch perl-Term-Cap-1.17-489.fc37.noarch perl-Text-ParseWords-3.31-489.fc37.noarch perl-Text-Tabs+Wrap-2021.0814-489.fc37.noarch perl-Time-Local-2:1.300-489.fc37.noarch perl-constant-1.33-490.fc37.noarch perl-if-0.61.000-492.fc38.noarch perl-interpreter-4:5.36.0-492.fc38.i686 perl-libs-4:5.36.0-492.fc38.i686 perl-macros-4:5.36.0-492.fc38.noarch perl-mro-1.26-492.fc38.i686 perl-overload-1.35-492.fc38.noarch perl-overloading-0.02-492.fc38.noarch perl-parent-1:0.239-1.fc38.noarch perl-podlators-1:5.00-1.fc38.noarch perl-vars-1.05-492.fc38.noarch pixman-0.40.0-6.fc38.i686 pybind11-devel-2.10.1-1.fc38.i686 pyproject-rpm-macros-1.5.0-1.fc38.noarch python-pip-wheel-22.3.1-1.fc38.noarch python-rpm-macros-3.11-6.fc38.noarch python-setuptools-wheel-65.5.1-1.fc38.noarch python3-3.11.1-1.fc38.i686 python3-appdirs-1.4.4-7.fc37.noarch python3-brotli-1.0.9-9.fc38.i686 python3-cairo-1.23.0-1.fc38.i686 python3-contourpy-1.0.6-1.fc38.i686 python3-cycler-0.11.0-6.fc37.noarch python3-dateutil-1:2.8.2-4.fc37.noarch python3-devel-3.11.1-1.fc38.i686 python3-flaky-3.7.0-9.fc37.noarch python3-fonttools-4.38.0-1.fc38.i686 python3-fs-2.4.11-12.fc37.noarch python3-kiwisolver-1.4.4-1.fc38.i686 python3-libs-3.11.1-1.fc38.i686 python3-lxml-4.9.1-1.fc38.i686 python3-matplotlib-3.6.2-4.fc38.i686 python3-matplotlib-data-3.6.2-4.fc38.noarch python3-matplotlib-data-fonts-3.6.2-4.fc38.noarch python3-matplotlib-tk-3.6.2-4.fc38.i686 python3-munkres-1.1.2-13.fc37.noarch python3-numpy-1:1.23.5-1.fc38.i686 python3-numpy-f2py-1:1.23.5-1.fc38.i686 python3-olefile-0.46-18.fc37.noarch python3-packaging-21.3-7.fc38.noarch python3-pillow-9.3.0-2.fc38.i686 python3-pillow-tk-9.3.0-2.fc38.i686 python3-pyparsing-3.0.9-2.fc37.noarch python3-pytz-2022.7-1.fc38.noarch python3-rpm-generators-13-2.fc37.noarch python3-rpm-macros-3.11-6.fc38.noarch python3-scipy-1.8.1-6.fc37.i686 python3-setuptools-65.5.1-1.fc38.noarch python3-six-1.16.0-8.fc37.noarch python3-tkinter-3.11.1-1.fc38.i686 python3-wheel-1:0.38.4-1.fc38.noarch rhash-1.4.3-1.fc38.i686 tcl-1:8.6.12-3.fc38.i686 tk-1:8.6.12-3.fc37.i686 vim-filesystem-2:9.0.1054-1.fc38.noarch xkbcomp-1.4.6-4.fc38.i686 xkeyboard-config-2.36-3.fc38.noarch xml-common-0.6.3-59.fc37.noarch xorg-x11-proto-devel-2022.2-2.fc38.noarch xorg-x11-server-Xvfb-1.20.14-12.fc38.i686 xorg-x11-server-common-1.20.14-12.fc38.i686 xorg-x11-xauth-1:1.1.2-2.fc37.i686 zlib-devel-1.2.13-1.fc38.i686 Complete! Finish: build setup for smoldyn-2.67.3-3.fc38.src.rpm Start: rpmbuild smoldyn-2.67.3-3.fc38.src.rpm Building target platforms: i686 Building for target i686 setting SOURCE_DATE_EPOCH=1658534400 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.FEOmmq + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf Smoldyn-2.67.3 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/Smoldyn-2.67.3.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd Smoldyn-2.67.3 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + echo 'Patch #0 (smoldyn-fix_libpaths.patch):' Patch #0 (smoldyn-fix_libpaths.patch): + /usr/bin/patch --no-backup-if-mismatch -f -p0 -b --suffix .fix_libpaths --fuzz=0 patching file CMakeLists.txt Hunk #1 succeeded at 253 (offset 44 lines). Hunk #2 succeeded at 269 (offset 44 lines). Hunk #3 succeeded at 433 (offset 44 lines). Hunk #4 succeeded at 510 (offset 47 lines). Patch #1 (smoldyn-freeglut.patch): + echo 'Patch #1 (smoldyn-freeglut.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p0 -b --suffix .freeglut --fuzz=0 patching file CMakeLists.txt Hunk #1 succeeded at 365 (offset 39 lines). Patch #2 (smoldyn-create_soname.patch): + echo 'Patch #2 (smoldyn-create_soname.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p0 -b --suffix .create_soname --fuzz=0 patching file CMakeLists.txt Hunk #2 succeeded at 517 (offset 47 lines). Patch #3 (smoldyn-avoid_automatic_wheel.patch): + echo 'Patch #3 (smoldyn-avoid_automatic_wheel.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p0 -b --suffix .avoid_automatic_wheel --fuzz=0 patching file source/python/CMakeLists.txt Hunk #1 succeeded at 20 (offset -3 lines). Patch #4 (smoldyn-bug121.patch): + echo 'Patch #4 (smoldyn-bug121.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p1 -b --suffix .bug121 --fuzz=0 patching file tests/test_api.py Patch #5 (smoldyn-bug123.patch): + echo 'Patch #5 (smoldyn-bug123.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p1 -b --suffix .bug123 --fuzz=0 patching file tests/test_api.py + rm -rf source/MSVClibs + rm -rf source/pybind11 + rm -rf source/BioNetGen source/MinGWlibs Toolchain-mingw32.cmake + rm -rf source/vcell/SimpleMesh.cpp source/vcell/SimpleMesh.h source/vcell/SimpleValueProvider.cpp source/vcell/SimpleValueProvider.h source/vcell/zconf.h source/vcell/zlib.h source/vcell/zlib.lib source/NextSubVolume/Eigen + rm -rf source/NextSubVolume/boost_include + rm -f 'source/vtk/*' + find . -type f -name '*.h' -exec chmod 0644 '{}' ';' + find . -type f -name '*.c' -exec chmod 0644 '{}' ';' + find . -type f -name '*.pdf' -exec chmod 0644 '{}' ';' + find . -type f -name '*.txt' -exec chmod 0644 '{}' ';' + find . -type f -name '*.txt' -exec sed -i 's/\r$//' '{}' ';' + sed -e 's|../../../source/BioNetGen/BNG2.pl|/usr/share/perl5/vendor_perl/BioNetGen/BNG2.pl|g' -i examples/S95_regression/lrmsim.txt examples/S12_bionetgen/lrm/lrmsim.txt examples/S12_bionetgen/abba/abbasim.txt examples/S94_archive/Andrews_2016/BioNetGen/lrm/lrmsim.txt examples/S94_archive/Andrews_2016/BioNetGen/abba/abbasim.txt + cp -p source/libSteve/SFMT/LICENSE.txt source/libSteve/SFMT/SFMT-LICENSE.txt + cp -p source/libSteve/SFMT/README.txt source/libSteve/SFMT/SFMT-README.txt + find -name '*.pyc' -delete + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.T1nOTk + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib/gfortran/modules' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib/gfortran/modules' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd Smoldyn-2.67.3 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib/gfortran/modules' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib/gfortran/modules' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + /usr/bin/cmake -S . -B redhat-linux-build -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_DO_STRIP:BOOL=OFF -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DBUILD_SHARED_LIBS:BOOL=ON -Wno-dev -B build -DCPACK_BINARY_STGZ:BOOL=OFF -DCPACK_BINARY_TGZ:BOOL=OFF -DCPACK_BINARY_TZ:BOOL=OFF -DCPACK_SOURCE_TBZ2:BOOL=OFF -DCPACK_SOURCE_TGZ:BOOL=OFF -DCPACK_SOURCE_TXZ:BOOL=OFF -DCPACK_SOURCE_TZ:BOOL=OFF -DOPTION_VCELL:BOOL=OFF -DOPTION_VTK:BOOL=OFF -DBUILD_SHARED_LIBS:BOOL=ON -DSMOLDYN_VERSION:STRING=2.67.3 -DSMOLDYN_VERSION_MAJOR:STRING=2 -DOPTION_TARGET_LIBSMOLDYN:BOOL=ON -DOPTION_STATIC:BOOL=OFF -DOPTION_PYTHON:BOOL=ON -DPYBIND11_FINDPYTHON:BOOL=ON -Dpybind11_DIR:PATH=/usr/share/cmake/pybind11 -DOPTION_USE_ZLIB:BOOL=ON -DOPTION_PDE:BOOL=ON -DPERL_VENDORLIB:PATH=/usr/share/perl5/vendor_perl -DCMAKE_BUILD_TYPE:STRING=Release -DCMAKE_INSTALL_LIBDIR:PATH=/usr/lib -DCMAKE_INSTALL_PREFIX:PATH=/usr -DCMAKE_VERBOSE_MAKEFILE:BOOL=TRUE -DCMAKE_COLOR_MAKEFILE:BOOL=ON -DCMAKE_SKIP_RPATH:BOOL=YES -DHAVE_GL_FREEGLUT_H=TRUE -DOPTION_EXAMPLES:BOOL=OFF -DOPTION_DOCS:BOOL=OFF -- The CXX compiler identification is GNU 13.0.0 -- The C compiler identification is GNU 13.0.0 -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Smoldyn version is set to: '2.67.3' -- Compiling for Smoldyn: ON -- Compiling for Libsmoldyn: ON -- Option to compile Smoldyn for VCell: OFF -- Option to cross-compile for Windows using MinGW: OFF -- Option to include NextSubvolume: ON -- Option to include VTK: OFF -- Option to compile with static libraries: OFF -- Option to include OpenGL support: ON -- Option to include LibTiff: ON -- Option to include Zlib: ON -- Option to incude Python module: ON -- Option to run Libsmoldyn examples: OFF -- Option to build documentation: OFF -- Performing Test C_FLAG_EXISTS -- Performing Test C_FLAG_EXISTS - Success -- Performing Test CXX_FLAG_EXISTS -- Performing Test CXX_FLAG_EXISTS - Success -- [COMPILER] Adding -Wno-unused-parameter -- Build type: Release -- Compiling on a Linux computer -- CMAKE_CXX_FLAGS variable: '-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' -- BioNetGen path: '/usr/share/perl5/vendor_perl/BioNetGen/BNG2.pl' -- Found OpenGL: /usr/lib/libOpenGL.so -- OpenGL found: '/usr/include', '/usr/lib/libGL.so;/usr/lib/libGLU.so' -- Found GLUT: /usr/lib/libglut.so -- Found TIFF: /usr/lib/libtiff.so (found version "4.4.0") -- Found Libtiff: '/usr/include', '/usr/lib/libtiff.so' -- Found Zlib: '/usr/include', '/usr/lib/libz.so' -- Boost headers found: '/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume/boost_include' -- Found Python3: /usr/bin/python3.11 (found version "3.11.1") found components: Interpreter Development Development.Module Development.Embed -- Performing Test HAS_FLTO -- Performing Test HAS_FLTO - Success -- Found pybind11: /usr/include (found version "2.10.1") -- [TEST] Found 15 test scripts -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_Fortran_FLAGS_RELEASE CMAKE_INSTALL_DO_STRIP LIB_INSTALL_DIR SHARE_INSTALL_PREFIX SYSCONF_INSTALL_DIR -- Build files have been written to: /builddir/build/BUILD/Smoldyn-2.67.3/build + /usr/bin/make -O -j2 V=1 VERBOSE=1 -C build make: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' /usr/bin/cmake -S/builddir/build/BUILD/Smoldyn-2.67.3 -B/builddir/build/BUILD/Smoldyn-2.67.3/build --check-build-system CMakeFiles/Makefile.cmake 0 make: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/Smoldyn-2.67.3/build/CMakeFiles /builddir/build/BUILD/Smoldyn-2.67.3/build//CMakeFiles/progress.marks make: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' /usr/bin/make -f CMakeFiles/Makefile2 all /usr/bin/make -f source/NextSubVolume/CMakeFiles/nsv.dir/build.make source/NextSubVolume/CMakeFiles/nsv.dir/depend /usr/bin/make -f source/libSteve/CMakeFiles/Steve.dir/build.make source/libSteve/CMakeFiles/Steve.dir/depend make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' cd /builddir/build/BUILD/Smoldyn-2.67.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/Smoldyn-2.67.3 /builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume /builddir/build/BUILD/Smoldyn-2.67.3/build /builddir/build/BUILD/Smoldyn-2.67.3/build/source/NextSubVolume /builddir/build/BUILD/Smoldyn-2.67.3/build/source/NextSubVolume/CMakeFiles/nsv.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' /usr/bin/make -f source/NextSubVolume/CMakeFiles/nsv.dir/build.make source/NextSubVolume/CMakeFiles/nsv.dir/build make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' cd /builddir/build/BUILD/Smoldyn-2.67.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/Smoldyn-2.67.3 /builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve /builddir/build/BUILD/Smoldyn-2.67.3/build /builddir/build/BUILD/Smoldyn-2.67.3/build/source/libSteve /builddir/build/BUILD/Smoldyn-2.67.3/build/source/libSteve/CMakeFiles/Steve.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' /usr/bin/make -f source/libSteve/CMakeFiles/Steve.dir/build.make source/libSteve/CMakeFiles/Steve.dir/build make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 1%] Building CXX object source/NextSubVolume/CMakeFiles/nsv.dir/StructuredGrid.cpp.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/NextSubVolume && /usr/bin/g++ -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -isystem /builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume/boost_include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -fPIC -Wno-unused-parameter -Wall -Wextra -std=gnu++14 -MD -MT source/NextSubVolume/CMakeFiles/nsv.dir/StructuredGrid.cpp.o -MF CMakeFiles/nsv.dir/StructuredGrid.cpp.o.d -o CMakeFiles/nsv.dir/StructuredGrid.cpp.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume/StructuredGrid.cpp make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 2%] Building C object source/libSteve/CMakeFiles/Steve.dir/Geometry.c.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/libSteve && /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve/../Smoldyn -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -fPIC -Wno-unused-parameter -Wall -Wextra -std=gnu11 -MD -MT source/libSteve/CMakeFiles/Steve.dir/Geometry.c.o -MF CMakeFiles/Steve.dir/Geometry.c.o.d -o CMakeFiles/Steve.dir/Geometry.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve/Geometry.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 3%] Building CXX object source/NextSubVolume/CMakeFiles/nsv.dir/Species.cpp.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/NextSubVolume && /usr/bin/g++ -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -isystem /builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume/boost_include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -fPIC -Wno-unused-parameter -Wall -Wextra -std=gnu++14 -MD -MT source/NextSubVolume/CMakeFiles/nsv.dir/Species.cpp.o -MF CMakeFiles/nsv.dir/Species.cpp.o.d -o CMakeFiles/nsv.dir/Species.cpp.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume/Species.cpp make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 4%] Building C object source/libSteve/CMakeFiles/Steve.dir/List.c.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/libSteve && /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve/../Smoldyn -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -fPIC -Wno-unused-parameter -Wall -Wextra -std=gnu11 -MD -MT source/libSteve/CMakeFiles/Steve.dir/List.c.o -MF CMakeFiles/Steve.dir/List.c.o.d -o CMakeFiles/Steve.dir/List.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve/List.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 7%] Building C object source/libSteve/CMakeFiles/Steve.dir/math2.c.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/libSteve && /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve/../Smoldyn -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -fPIC -Wno-unused-parameter -Wall -Wextra -std=gnu11 -MD -MT source/libSteve/CMakeFiles/Steve.dir/math2.c.o -MF CMakeFiles/Steve.dir/math2.c.o.d -o CMakeFiles/Steve.dir/math2.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve/math2.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 6%] Building CXX object source/NextSubVolume/CMakeFiles/nsv.dir/ReactionEquation.cpp.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/NextSubVolume && /usr/bin/g++ -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -isystem /builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume/boost_include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -fPIC -Wno-unused-parameter -Wall -Wextra -std=gnu++14 -MD -MT source/NextSubVolume/CMakeFiles/nsv.dir/ReactionEquation.cpp.o -MF CMakeFiles/nsv.dir/ReactionEquation.cpp.o.d -o CMakeFiles/nsv.dir/ReactionEquation.cpp.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume/ReactionEquation.cpp make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 8%] Building C object source/libSteve/CMakeFiles/Steve.dir/opengl2.c.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/libSteve && /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve/../Smoldyn -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -fPIC -Wno-unused-parameter -Wall -Wextra -std=gnu11 -MD -MT source/libSteve/CMakeFiles/Steve.dir/opengl2.c.o -MF CMakeFiles/Steve.dir/opengl2.c.o.d -o CMakeFiles/Steve.dir/opengl2.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve/opengl2.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 11%] Building C object source/libSteve/CMakeFiles/Steve.dir/parse.c.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/libSteve && /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve/../Smoldyn -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -fPIC -Wno-unused-parameter -Wall -Wextra -std=gnu11 -MD -MT source/libSteve/CMakeFiles/Steve.dir/parse.c.o -MF CMakeFiles/Steve.dir/parse.c.o.d -o CMakeFiles/Steve.dir/parse.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve/parse.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 12%] Building C object source/libSteve/CMakeFiles/Steve.dir/queue.c.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/libSteve && /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve/../Smoldyn -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -fPIC -Wno-unused-parameter -Wall -Wextra -std=gnu11 -MD -MT source/libSteve/CMakeFiles/Steve.dir/queue.c.o -MF CMakeFiles/Steve.dir/queue.c.o.d -o CMakeFiles/Steve.dir/queue.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve/queue.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 13%] Building C object source/libSteve/CMakeFiles/Steve.dir/random2.c.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/libSteve && /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve/../Smoldyn -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -fPIC -Wno-unused-parameter -Wall -Wextra -std=gnu11 -MD -MT source/libSteve/CMakeFiles/Steve.dir/random2.c.o -MF CMakeFiles/Steve.dir/random2.c.o.d -o CMakeFiles/Steve.dir/random2.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve/random2.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 14%] Building C object source/libSteve/CMakeFiles/Steve.dir/Rn.c.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/libSteve && /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve/../Smoldyn -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -fPIC -Wno-unused-parameter -Wall -Wextra -std=gnu11 -MD -MT source/libSteve/CMakeFiles/Steve.dir/Rn.c.o -MF CMakeFiles/Steve.dir/Rn.c.o.d -o CMakeFiles/Steve.dir/Rn.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve/Rn.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 16%] Building C object source/libSteve/CMakeFiles/Steve.dir/RnSort.c.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/libSteve && /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve/../Smoldyn -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -fPIC -Wno-unused-parameter -Wall -Wextra -std=gnu11 -MD -MT source/libSteve/CMakeFiles/Steve.dir/RnSort.c.o -MF CMakeFiles/Steve.dir/RnSort.c.o.d -o CMakeFiles/Steve.dir/RnSort.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve/RnSort.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 9%] Building CXX object source/NextSubVolume/CMakeFiles/nsv.dir/NextSubvolumeMethod.cpp.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/NextSubVolume && /usr/bin/g++ -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -isystem /builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume/boost_include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign 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-flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -fPIC -Wno-unused-parameter -Wall -Wextra -std=gnu11 -MD -MT source/libSteve/CMakeFiles/Steve.dir/rxnparam.c.o -MF CMakeFiles/Steve.dir/rxnparam.c.o.d -o CMakeFiles/Steve.dir/rxnparam.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve/rxnparam.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 19%] Building C object source/libSteve/CMakeFiles/Steve.dir/SimCommand.c.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/libSteve && /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve/../Smoldyn -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -fPIC -Wno-unused-parameter -Wall -Wextra -std=gnu11 -MD -MT source/libSteve/CMakeFiles/Steve.dir/SimCommand.c.o -MF CMakeFiles/Steve.dir/SimCommand.c.o.d -o CMakeFiles/Steve.dir/SimCommand.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve/SimCommand.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 18%] Building CXX object source/NextSubVolume/CMakeFiles/nsv.dir/Kairos.cpp.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/NextSubVolume && /usr/bin/g++ -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -isystem /builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume/boost_include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -fPIC -Wno-unused-parameter -Wall 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-fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -fPIC -Wno-unused-parameter -Wall -Wextra -std=gnu++14 -MD -MT source/NextSubVolume/CMakeFiles/nsv.dir/Io.cpp.o -MF CMakeFiles/nsv.dir/Io.cpp.o.d -o CMakeFiles/nsv.dir/Io.cpp.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume/Io.cpp make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 20%] Building C object source/libSteve/CMakeFiles/Steve.dir/Sphere.c.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/libSteve && /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve/../Smoldyn -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -fPIC -Wno-unused-parameter -Wall -Wextra -std=gnu11 -MD -MT source/libSteve/CMakeFiles/Steve.dir/Sphere.c.o -MF CMakeFiles/Steve.dir/Sphere.c.o.d -o CMakeFiles/Steve.dir/Sphere.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve/Sphere.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 23%] Building CXX object source/NextSubVolume/CMakeFiles/nsv.dir/Geometry.cpp.o cd 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/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume/Geometry.cpp make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 24%] Building C object source/libSteve/CMakeFiles/Steve.dir/string2.c.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/libSteve && /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve/../Smoldyn -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse 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-grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -fPIC -Wno-unused-parameter -Wall -Wextra -std=gnu11 -MD -MT source/libSteve/CMakeFiles/Steve.dir/SurfaceParam.c.o -MF CMakeFiles/Steve.dir/SurfaceParam.c.o.d -o CMakeFiles/Steve.dir/SurfaceParam.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve/SurfaceParam.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 28%] Building C object source/libSteve/CMakeFiles/Steve.dir/Zn.c.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/libSteve && /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve/../Smoldyn -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -fPIC -Wno-unused-parameter -Wall -Wextra -std=gnu11 -MD -MT source/libSteve/CMakeFiles/Steve.dir/Zn.c.o -MF CMakeFiles/Steve.dir/Zn.c.o.d -o CMakeFiles/Steve.dir/Zn.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve/Zn.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 29%] Building C object source/libSteve/CMakeFiles/Steve.dir/SFMT/SFMT.c.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/libSteve && /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve/../Smoldyn -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -fPIC -Wno-unused-parameter -Wall -Wextra -std=gnu11 -MD -MT source/libSteve/CMakeFiles/Steve.dir/SFMT/SFMT.c.o -MF CMakeFiles/Steve.dir/SFMT/SFMT.c.o.d -o CMakeFiles/Steve.dir/SFMT/SFMT.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve/SFMT/SFMT.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[1]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 29%] Built target Steve make[1]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 25%] Building CXX object source/NextSubVolume/CMakeFiles/nsv.dir/nsvc.cpp.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/NextSubVolume && /usr/bin/g++ -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -isystem /builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume/boost_include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches 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CMakeFiles/smoldyn_shared.dir/depend make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' cd /builddir/build/BUILD/Smoldyn-2.67.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/Smoldyn-2.67.3 /builddir/build/BUILD/Smoldyn-2.67.3 /builddir/build/BUILD/Smoldyn-2.67.3/build /builddir/build/BUILD/Smoldyn-2.67.3/build /builddir/build/BUILD/Smoldyn-2.67.3/build/CMakeFiles/smoldyn_shared.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' cd /builddir/build/BUILD/Smoldyn-2.67.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/Smoldyn-2.67.3 /builddir/build/BUILD/Smoldyn-2.67.3 /builddir/build/BUILD/Smoldyn-2.67.3/build /builddir/build/BUILD/Smoldyn-2.67.3/build /builddir/build/BUILD/Smoldyn-2.67.3/build/CMakeFiles/smoldyn_static.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' /usr/bin/make -f CMakeFiles/smoldyn_static.dir/build.make CMakeFiles/smoldyn_static.dir/build /usr/bin/make -f CMakeFiles/smoldyn_shared.dir/build.make CMakeFiles/smoldyn_shared.dir/build make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 30%] Building C object CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolbng.c.o /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -fPIC -Wno-unused-parameter -Wall -Wextra -std=gnu11 -MD -MT CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolbng.c.o -MF CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolbng.c.o.d -o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolbng.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolbng.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 32%] Building C object CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolbng.c.o /usr/bin/gcc -Dsmoldyn_shared_EXPORTS -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -fPIC -Wno-unused-parameter -Wall -Wextra -std=gnu11 -MD -MT CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolbng.c.o -MF CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolbng.c.o.d -o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolbng.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolbng.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 33%] Building C object CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolboxes.c.o /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -fPIC -Wno-unused-parameter -Wall -Wextra -std=gnu11 -MD -MT CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolboxes.c.o -MF CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolboxes.c.o.d -o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolboxes.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolboxes.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolboxes.c: In function 'boxesupdatelists': /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolboxes.c:783:55: warning: argument 1 range [2147483648, 4294967294] exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 783 | bptr->neigh=(boxptr*) calloc(nneigh,sizeof(boxptr)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve/random2.h:17, from /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolboxes.c:13: /usr/include/stdlib.h:556:14: note: in a call to allocation function 'calloc' declared here 556 | extern void *calloc (size_t __nmemb, size_t __size) | ^~~~~~ make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 34%] Building C object CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolboxes.c.o /usr/bin/gcc -Dsmoldyn_shared_EXPORTS -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -fPIC -Wno-unused-parameter -Wall -Wextra -std=gnu11 -MD -MT CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolboxes.c.o -MF CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolboxes.c.o.d -o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolboxes.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolboxes.c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolboxes.c: In function 'boxesupdatelists': /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolboxes.c:783:55: warning: argument 1 range [2147483648, 4294967294] exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 783 | bptr->neigh=(boxptr*) calloc(nneigh,sizeof(boxptr)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve/random2.h:17, from /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolboxes.c:13: /usr/include/stdlib.h:556:14: note: in a call to allocation function 'calloc' declared here 556 | extern void *calloc (size_t __nmemb, size_t __size) | ^~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 37%] Building C object CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolcmd.c.o /usr/bin/gcc -Dsmoldyn_shared_EXPORTS -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -fPIC -Wno-unused-parameter -Wall -Wextra -std=gnu11 -MD -MT CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolcmd.c.o -MF CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolcmd.c.o.d -o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolcmd.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolcmd.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 35%] Building C object CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolcmd.c.o /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -fPIC -Wno-unused-parameter -Wall -Wextra -std=gnu11 -MD -MT CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolcmd.c.o -MF CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolcmd.c.o.d -o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolcmd.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolcmd.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 38%] Building C object CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolcomparts.c.o /usr/bin/gcc -Dsmoldyn_shared_EXPORTS -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -fPIC -Wno-unused-parameter -Wall -Wextra -std=gnu11 -MD -MT CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolcomparts.c.o -MF CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolcomparts.c.o.d -o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolcomparts.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolcomparts.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 39%] Building C object CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolcomparts.c.o /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -fPIC -Wno-unused-parameter -Wall -Wextra -std=gnu11 -MD -MT CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolcomparts.c.o -MF CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolcomparts.c.o.d -o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolcomparts.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolcomparts.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 40%] Building C object CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolfilament.c.o /usr/bin/gcc -Dsmoldyn_shared_EXPORTS -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -fPIC -Wno-unused-parameter -Wall -Wextra -std=gnu11 -MD -MT CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolfilament.c.o -MF CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolfilament.c.o.d -o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolfilament.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolfilament.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 41%] Building C object CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolfilament.c.o /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -fPIC -Wno-unused-parameter -Wall -Wextra -std=gnu11 -MD -MT CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolfilament.c.o -MF CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolfilament.c.o.d -o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolfilament.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolfilament.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 43%] Building C object CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolgraphics.c.o /usr/bin/gcc -Dsmoldyn_shared_EXPORTS -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -fPIC -Wno-unused-parameter -Wall -Wextra -std=gnu11 -MD -MT CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolgraphics.c.o -MF CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolgraphics.c.o.d -o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolgraphics.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolgraphics.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 44%] Building C object CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolgraphics.c.o /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -fPIC -Wno-unused-parameter -Wall -Wextra -std=gnu11 -MD -MT CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolgraphics.c.o -MF CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolgraphics.c.o.d -o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolgraphics.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolgraphics.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 45%] Building C object CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolmolec.c.o /usr/bin/gcc -Dsmoldyn_shared_EXPORTS -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -fPIC -Wno-unused-parameter -Wall -Wextra -std=gnu11 -MD -MT CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolmolec.c.o -MF CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolmolec.c.o.d -o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolmolec.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolmolec.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 46%] Building C object CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolmolec.c.o /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -fPIC -Wno-unused-parameter -Wall -Wextra -std=gnu11 -MD -MT CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolmolec.c.o -MF CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolmolec.c.o.d -o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolmolec.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolmolec.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 48%] Building C object CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolport.c.o /usr/bin/gcc -Dsmoldyn_shared_EXPORTS -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -fPIC -Wno-unused-parameter -Wall -Wextra -std=gnu11 -MD -MT CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolport.c.o -MF CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolport.c.o.d -o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolport.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolport.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 49%] Building C object CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolport.c.o /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 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-I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -fPIC -Wno-unused-parameter -Wall -Wextra -std=gnu11 -MD -MT CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smollattice.c.o -MF CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smollattice.c.o.d -o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smollattice.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smollattice.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 51%] Building C object CMakeFiles/smoldyn_static.dir/source/Smoldyn/smollattice.c.o /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -fPIC -Wno-unused-parameter -Wall -Wextra -std=gnu11 -MD -MT CMakeFiles/smoldyn_static.dir/source/Smoldyn/smollattice.c.o -MF CMakeFiles/smoldyn_static.dir/source/Smoldyn/smollattice.c.o.d -o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smollattice.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smollattice.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 53%] Building C object CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolreact.c.o /usr/bin/gcc -Dsmoldyn_shared_EXPORTS -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -fPIC -Wno-unused-parameter -Wall -Wextra -std=gnu11 -MD -MT CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolreact.c.o -MF CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolreact.c.o.d -o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolreact.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolreact.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 54%] Building C object CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolreact.c.o /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 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-I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -fPIC -Wno-unused-parameter -Wall -Wextra -std=gnu11 -MD -MT CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolrule.c.o -MF CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolrule.c.o.d -o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolrule.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolrule.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 56%] Building C object CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolrule.c.o /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -fPIC -Wno-unused-parameter -Wall -Wextra -std=gnu11 -MD -MT CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolrule.c.o -MF CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolrule.c.o.d -o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolrule.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolrule.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 58%] Building CXX object CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolsim.cpp.o /usr/bin/g++ -Dsmoldyn_shared_EXPORTS -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -fPIC -Wno-unused-parameter -Wall -Wextra -std=gnu++14 -MD -MT CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolsim.cpp.o -MF CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolsim.cpp.o.d -o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolsim.cpp.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolsim.cpp make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 59%] Building CXX object CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolsim.cpp.o /usr/bin/g++ -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 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-I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -fPIC -Wno-unused-parameter -Wall -Wextra -std=gnu11 -MD -MT CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolsurface.c.o -MF CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolsurface.c.o.d -o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolsurface.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolsurface.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 60%] Building C object CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolsurface.c.o /usr/bin/gcc -Dsmoldyn_shared_EXPORTS -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -fPIC -Wno-unused-parameter -Wall -Wextra -std=gnu11 -MD -MT CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolsurface.c.o -MF CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolsurface.c.o.d -o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolsurface.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolsurface.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 62%] Building C object CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolwall.c.o /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -fPIC -Wno-unused-parameter -Wall -Wextra -std=gnu11 -MD -MT CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolwall.c.o -MF CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolwall.c.o.d -o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolwall.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolwall.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 64%] Building C object CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolwall.c.o /usr/bin/gcc -Dsmoldyn_shared_EXPORTS -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -fPIC -Wno-unused-parameter -Wall -Wextra -std=gnu11 -MD -MT CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolwall.c.o -MF CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolwall.c.o.d -o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolwall.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolwall.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 65%] Building CXX object CMakeFiles/smoldyn_static.dir/source/Smoldyn/libsmoldyn.cpp.o /usr/bin/g++ -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -fPIC -Wno-unused-parameter -Wall -Wextra -std=gnu++14 -MD -MT CMakeFiles/smoldyn_static.dir/source/Smoldyn/libsmoldyn.cpp.o -MF CMakeFiles/smoldyn_static.dir/source/Smoldyn/libsmoldyn.cpp.o.d -o CMakeFiles/smoldyn_static.dir/source/Smoldyn/libsmoldyn.cpp.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/libsmoldyn.cpp make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 66%] Building CXX object CMakeFiles/smoldyn_shared.dir/source/Smoldyn/libsmoldyn.cpp.o /usr/bin/g++ -Dsmoldyn_shared_EXPORTS -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -fPIC -Wno-unused-parameter -Wall -Wextra -std=gnu++14 -MD -MT CMakeFiles/smoldyn_shared.dir/source/Smoldyn/libsmoldyn.cpp.o -MF CMakeFiles/smoldyn_shared.dir/source/Smoldyn/libsmoldyn.cpp.o.d -o 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CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolport.c.o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smollattice.c.o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolreact.c.o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolrule.c.o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolsim.cpp.o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolsurface.c.o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolwall.c.o CMakeFiles/smoldyn_static.dir/source/Smoldyn/libsmoldyn.cpp.o source/libSteve/CMakeFiles/Steve.dir/Geometry.c.o source/libSteve/CMakeFiles/Steve.dir/List.c.o source/libSteve/CMakeFiles/Steve.dir/math2.c.o source/libSteve/CMakeFiles/Steve.dir/opengl2.c.o source/libSteve/CMakeFiles/Steve.dir/parse.c.o source/libSteve/CMakeFiles/Steve.dir/queue.c.o source/libSteve/CMakeFiles/Steve.dir/random2.c.o source/libSteve/CMakeFiles/Steve.dir/Rn.c.o source/libSteve/CMakeFiles/Steve.dir/RnSort.c.o source/libSteve/CMakeFiles/Steve.dir/rxnparam.c.o source/libSteve/CMakeFiles/Steve.dir/SimCommand.c.o source/libSteve/CMakeFiles/Steve.dir/Sphere.c.o source/libSteve/CMakeFiles/Steve.dir/string2.c.o source/libSteve/CMakeFiles/Steve.dir/SurfaceParam.c.o source/libSteve/CMakeFiles/Steve.dir/Zn.c.o source/libSteve/CMakeFiles/Steve.dir/SFMT/SFMT.c.o source/NextSubVolume/CMakeFiles/nsv.dir/StructuredGrid.cpp.o source/NextSubVolume/CMakeFiles/nsv.dir/Species.cpp.o source/NextSubVolume/CMakeFiles/nsv.dir/ReactionEquation.cpp.o source/NextSubVolume/CMakeFiles/nsv.dir/NextSubvolumeMethod.cpp.o source/NextSubVolume/CMakeFiles/nsv.dir/Kairos.cpp.o source/NextSubVolume/CMakeFiles/nsv.dir/Io.cpp.o source/NextSubVolume/CMakeFiles/nsv.dir/Geometry.cpp.o source/NextSubVolume/CMakeFiles/nsv.dir/nsvc.cpp.o /usr/bin/ranlib libsmoldyn_static.a make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[1]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 69%] Built target smoldyn_static make[1]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' /usr/bin/make -f source/python/CMakeFiles/_pysmoldyn.dir/build.make source/python/CMakeFiles/_pysmoldyn.dir/depend make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' cd /builddir/build/BUILD/Smoldyn-2.67.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/Smoldyn-2.67.3 /builddir/build/BUILD/Smoldyn-2.67.3/source/python /builddir/build/BUILD/Smoldyn-2.67.3/build /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python/CMakeFiles/_pysmoldyn.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' /usr/bin/make -f source/python/CMakeFiles/_pysmoldyn.dir/build.make source/python/CMakeFiles/_pysmoldyn.dir/build make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 70%] Building C object source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolbng.c.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python && /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/usr/include/python3.11 -I/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -fPIC -Wno-unused-parameter -Wall -Wextra -DENABLE_PYTHON_CALLBACK -DCOMPILE_AS_PY_MODULE -std=gnu11 -MD -MT source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolbng.c.o -MF CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolbng.c.o.d -o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolbng.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolbng.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 71%] Building C object source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolboxes.c.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python && /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/usr/include/python3.11 -I/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -fPIC -Wno-unused-parameter -Wall -Wextra -DENABLE_PYTHON_CALLBACK -DCOMPILE_AS_PY_MODULE -std=gnu11 -MD -MT source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolboxes.c.o -MF CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolboxes.c.o.d -o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolboxes.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolboxes.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolboxes.c: In function 'boxesupdatelists': /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolboxes.c:783:55: warning: argument 1 range [2147483648, 4294967294] exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 783 | bptr->neigh=(boxptr*) calloc(nneigh,sizeof(boxptr)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve/random2.h:17, from /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolboxes.c:13: /usr/include/stdlib.h:556:14: note: in a call to allocation function 'calloc' declared here 556 | extern void *calloc (size_t __nmemb, size_t __size) | ^~~~~~ make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 72%] Building C object source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolcmd.c.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python && /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/usr/include/python3.11 -I/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -fPIC -Wno-unused-parameter -Wall -Wextra -DENABLE_PYTHON_CALLBACK -DCOMPILE_AS_PY_MODULE -std=gnu11 -MD -MT source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolcmd.c.o -MF CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolcmd.c.o.d -o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolcmd.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolcmd.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 74%] Building C object source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolcomparts.c.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python && /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/usr/include/python3.11 -I/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -fPIC -Wno-unused-parameter -Wall -Wextra -DENABLE_PYTHON_CALLBACK -DCOMPILE_AS_PY_MODULE -std=gnu11 -MD -MT source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolcomparts.c.o -MF CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolcomparts.c.o.d -o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolcomparts.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolcomparts.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 75%] Building C object source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolfilament.c.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python && /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/usr/include/python3.11 -I/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -fPIC -Wno-unused-parameter -Wall -Wextra -DENABLE_PYTHON_CALLBACK -DCOMPILE_AS_PY_MODULE -std=gnu11 -MD -MT source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolfilament.c.o -MF CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolfilament.c.o.d -o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolfilament.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolfilament.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 76%] Building C object source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolgraphics.c.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python && /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/usr/include/python3.11 -I/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -fPIC -Wno-unused-parameter -Wall -Wextra -DENABLE_PYTHON_CALLBACK -DCOMPILE_AS_PY_MODULE -std=gnu11 -MD -MT source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolgraphics.c.o -MF CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolgraphics.c.o.d -o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolgraphics.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolgraphics.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 77%] Building C object source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolmolec.c.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python && /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/usr/include/python3.11 -I/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -fPIC -Wno-unused-parameter -Wall -Wextra -DENABLE_PYTHON_CALLBACK -DCOMPILE_AS_PY_MODULE -std=gnu11 -MD -MT source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolmolec.c.o -MF CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolmolec.c.o.d -o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolmolec.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolmolec.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 79%] Building C object source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolport.c.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python && /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/usr/include/python3.11 -I/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -fPIC -Wno-unused-parameter -Wall -Wextra -DENABLE_PYTHON_CALLBACK -DCOMPILE_AS_PY_MODULE -std=gnu11 -MD -MT source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolport.c.o -MF CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolport.c.o.d -o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolport.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolport.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 80%] Building C object source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smollattice.c.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python && /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/usr/include/python3.11 -I/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -fPIC -Wno-unused-parameter -Wall -Wextra -DENABLE_PYTHON_CALLBACK -DCOMPILE_AS_PY_MODULE -std=gnu11 -MD -MT source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smollattice.c.o -MF CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smollattice.c.o.d -o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smollattice.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smollattice.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 81%] Building C object source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolreact.c.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python && /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/usr/include/python3.11 -I/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -fPIC -Wno-unused-parameter -Wall -Wextra -DENABLE_PYTHON_CALLBACK -DCOMPILE_AS_PY_MODULE -std=gnu11 -MD -MT source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolreact.c.o -MF CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolreact.c.o.d -o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolreact.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolreact.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 82%] Building C object source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolrule.c.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python && /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/usr/include/python3.11 -I/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -fPIC -Wno-unused-parameter -Wall -Wextra -DENABLE_PYTHON_CALLBACK -DCOMPILE_AS_PY_MODULE -std=gnu11 -MD -MT source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolrule.c.o -MF CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolrule.c.o.d -o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolrule.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolrule.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 69%] Linking CXX shared library libsmoldyn_shared.so /usr/bin/cmake -E cmake_link_script CMakeFiles/smoldyn_shared.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libsmoldyn_shared.so.2 -o libsmoldyn_shared.so.2.67.3 CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolbng.c.o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolboxes.c.o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolcmd.c.o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolcomparts.c.o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolfilament.c.o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolgraphics.c.o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolmolec.c.o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolport.c.o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smollattice.c.o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolreact.c.o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolrule.c.o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolsim.cpp.o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolsurface.c.o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolwall.c.o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/libsmoldyn.cpp.o source/libSteve/CMakeFiles/Steve.dir/Geometry.c.o source/libSteve/CMakeFiles/Steve.dir/List.c.o source/libSteve/CMakeFiles/Steve.dir/math2.c.o source/libSteve/CMakeFiles/Steve.dir/opengl2.c.o source/libSteve/CMakeFiles/Steve.dir/parse.c.o source/libSteve/CMakeFiles/Steve.dir/queue.c.o source/libSteve/CMakeFiles/Steve.dir/random2.c.o source/libSteve/CMakeFiles/Steve.dir/Rn.c.o source/libSteve/CMakeFiles/Steve.dir/RnSort.c.o source/libSteve/CMakeFiles/Steve.dir/rxnparam.c.o source/libSteve/CMakeFiles/Steve.dir/SimCommand.c.o source/libSteve/CMakeFiles/Steve.dir/Sphere.c.o source/libSteve/CMakeFiles/Steve.dir/string2.c.o source/libSteve/CMakeFiles/Steve.dir/SurfaceParam.c.o source/libSteve/CMakeFiles/Steve.dir/Zn.c.o source/libSteve/CMakeFiles/Steve.dir/SFMT/SFMT.c.o source/NextSubVolume/CMakeFiles/nsv.dir/StructuredGrid.cpp.o source/NextSubVolume/CMakeFiles/nsv.dir/Species.cpp.o source/NextSubVolume/CMakeFiles/nsv.dir/ReactionEquation.cpp.o source/NextSubVolume/CMakeFiles/nsv.dir/NextSubvolumeMethod.cpp.o source/NextSubVolume/CMakeFiles/nsv.dir/Kairos.cpp.o source/NextSubVolume/CMakeFiles/nsv.dir/Io.cpp.o source/NextSubVolume/CMakeFiles/nsv.dir/Geometry.cpp.o source/NextSubVolume/CMakeFiles/nsv.dir/nsvc.cpp.o /usr/lib/libGL.so /usr/lib/libGLU.so -lglut /usr/lib/libtiff.so /usr/lib/libz.so /usr/bin/cmake -E cmake_symlink_library libsmoldyn_shared.so.2.67.3 libsmoldyn_shared.so.2 libsmoldyn_shared.so /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smoldyn.h:714:16: warning: type 'struct latticestruct' violates the C++ One Definition Rule [-Wodr] 714 | typedef struct latticestruct | ^ /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smoldyn.h:714:16: note: a different type is defined in another translation unit 714 | typedef struct latticestruct | ^ /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smoldyn.h:739:26: note: the first difference of corresponding definitions is field 'nsv' 739 | NextSubvolumeMethod* nsv; // nsv class | ^ /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smoldyn.h:739:26: note: a field of same name but different type is defined in another translation unit 739 | NextSubvolumeMethod* nsv; // nsv class | ^ /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smoldyn.h:714:16: note: type name 'NextSubvolumeMethod' should match type name 'Kairos::NextSubvolumeMethod' 714 | typedef struct latticestruct | ^ /builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume/NextSubvolumeMethod.h:137:7: note: the incompatible type is defined here 137 | class NextSubvolumeMethod | ^ /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolboxes.c: In function 'boxesupdatelists': /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolboxes.c:783:55: warning: argument 1 range [2147483648, 4294967294] exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 783 | bptr->neigh=(boxptr*) calloc(nneigh,sizeof(boxptr)); | ^ /usr/include/stdlib.h:556:14: note: in a call to allocation function 'calloc' declared here 556 | extern void *calloc (size_t __nmemb, size_t __size) | ^ make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[1]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 83%] Built target smoldyn_shared make[1]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' /usr/bin/make -f CMakeFiles/smoldyn.dir/build.make CMakeFiles/smoldyn.dir/depend make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' cd /builddir/build/BUILD/Smoldyn-2.67.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/Smoldyn-2.67.3 /builddir/build/BUILD/Smoldyn-2.67.3 /builddir/build/BUILD/Smoldyn-2.67.3/build /builddir/build/BUILD/Smoldyn-2.67.3/build /builddir/build/BUILD/Smoldyn-2.67.3/build/CMakeFiles/smoldyn.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' /usr/bin/make -f CMakeFiles/smoldyn.dir/build.make CMakeFiles/smoldyn.dir/build make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 85%] Building CXX object CMakeFiles/smoldyn.dir/source/Smoldyn/smoldyn.cpp.o /usr/bin/g++ -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -Wno-unused-parameter -Wall -Wextra -std=gnu++14 -MD -MT CMakeFiles/smoldyn.dir/source/Smoldyn/smoldyn.cpp.o -MF CMakeFiles/smoldyn.dir/source/Smoldyn/smoldyn.cpp.o.d -o CMakeFiles/smoldyn.dir/source/Smoldyn/smoldyn.cpp.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smoldyn.cpp make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 86%] Linking CXX executable smoldyn /usr/bin/cmake -E cmake_link_script CMakeFiles/smoldyn.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/smoldyn.dir/source/Smoldyn/smoldyn.cpp.o -o smoldyn libsmoldyn_shared.so.2.67.3 /usr/lib/libGL.so /usr/lib/libGLU.so -lglut /usr/lib/libtiff.so /usr/lib/libz.so make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[1]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 86%] Built target smoldyn make[1]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 87%] Building C object source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolsurface.c.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python && /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/usr/include/python3.11 -I/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -fPIC -Wno-unused-parameter -Wall -Wextra -DENABLE_PYTHON_CALLBACK -DCOMPILE_AS_PY_MODULE -std=gnu11 -MD -MT source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolsurface.c.o -MF CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolsurface.c.o.d -o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolsurface.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolsurface.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 88%] Building C object source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolwall.c.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python && /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/usr/include/python3.11 -I/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -fPIC -Wno-unused-parameter -Wall -Wextra -DENABLE_PYTHON_CALLBACK -DCOMPILE_AS_PY_MODULE -std=gnu11 -MD -MT source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolwall.c.o -MF CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolwall.c.o.d -o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolwall.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolwall.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 83%] Building CXX object source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolsim.cpp.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python && /usr/bin/g++ -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/usr/include/python3.11 -I/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -fPIC -Wno-unused-parameter -Wall -Wextra -DENABLE_PYTHON_CALLBACK -DCOMPILE_AS_PY_MODULE -std=gnu++14 -MD -MT source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolsim.cpp.o -MF CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolsim.cpp.o.d -o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolsim.cpp.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolsim.cpp In file included from /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smoldyn.h:15, from /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolsim.cpp:27: /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/../python/CallbackFunc.h:20:7: warning: 'CallbackFunc' declared with greater visibility than the type of its field 'CallbackFunc::func_' [-Wattributes] 20 | class CallbackFunc | ^~~~~~~~~~~~ /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/../python/CallbackFunc.h:20:7: warning: 'CallbackFunc' declared with greater visibility than the type of its field 'CallbackFunc::target_' [-Wattributes] /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/../python/CallbackFunc.h:20:7: warning: 'CallbackFunc' declared with greater visibility than the type of its field 'CallbackFunc::args_' [-Wattributes] make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 90%] Building CXX object source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/libsmoldyn.cpp.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python && /usr/bin/g++ -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/usr/include/python3.11 -I/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -fPIC -Wno-unused-parameter -Wall -Wextra -DENABLE_PYTHON_CALLBACK -DCOMPILE_AS_PY_MODULE -std=gnu++14 -MD -MT source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/libsmoldyn.cpp.o -MF CMakeFiles/_pysmoldyn.dir/__/Smoldyn/libsmoldyn.cpp.o.d -o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/libsmoldyn.cpp.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/libsmoldyn.cpp In file included from /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smoldyn.h:15, from /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/libsmoldyn.cpp:15: /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/../python/CallbackFunc.h:20:7: warning: 'CallbackFunc' declared with greater visibility than the type of its field 'CallbackFunc::func_' [-Wattributes] 20 | class CallbackFunc | ^~~~~~~~~~~~ /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/../python/CallbackFunc.h:20:7: warning: 'CallbackFunc' declared with greater visibility than the type of its field 'CallbackFunc::target_' [-Wattributes] /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/../python/CallbackFunc.h:20:7: warning: 'CallbackFunc' declared with greater visibility than the type of its field 'CallbackFunc::args_' [-Wattributes] make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 91%] Linking CXX static library lib_pysmoldyn.a cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python && /usr/bin/cmake -P CMakeFiles/_pysmoldyn.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python && /usr/bin/cmake -E cmake_link_script CMakeFiles/_pysmoldyn.dir/link.txt --verbose=1 /usr/bin/ar qc lib_pysmoldyn.a CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolbng.c.o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolboxes.c.o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolcmd.c.o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolcomparts.c.o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolfilament.c.o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolgraphics.c.o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolmolec.c.o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolport.c.o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smollattice.c.o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolreact.c.o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolrule.c.o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolsim.cpp.o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolsurface.c.o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolwall.c.o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/libsmoldyn.cpp.o ../libSteve/CMakeFiles/Steve.dir/Geometry.c.o ../libSteve/CMakeFiles/Steve.dir/List.c.o ../libSteve/CMakeFiles/Steve.dir/math2.c.o ../libSteve/CMakeFiles/Steve.dir/opengl2.c.o ../libSteve/CMakeFiles/Steve.dir/parse.c.o ../libSteve/CMakeFiles/Steve.dir/queue.c.o ../libSteve/CMakeFiles/Steve.dir/random2.c.o ../libSteve/CMakeFiles/Steve.dir/Rn.c.o ../libSteve/CMakeFiles/Steve.dir/RnSort.c.o ../libSteve/CMakeFiles/Steve.dir/rxnparam.c.o ../libSteve/CMakeFiles/Steve.dir/SimCommand.c.o ../libSteve/CMakeFiles/Steve.dir/Sphere.c.o ../libSteve/CMakeFiles/Steve.dir/string2.c.o ../libSteve/CMakeFiles/Steve.dir/SurfaceParam.c.o ../libSteve/CMakeFiles/Steve.dir/Zn.c.o ../libSteve/CMakeFiles/Steve.dir/SFMT/SFMT.c.o ../NextSubVolume/CMakeFiles/nsv.dir/StructuredGrid.cpp.o ../NextSubVolume/CMakeFiles/nsv.dir/Species.cpp.o ../NextSubVolume/CMakeFiles/nsv.dir/ReactionEquation.cpp.o ../NextSubVolume/CMakeFiles/nsv.dir/NextSubvolumeMethod.cpp.o ../NextSubVolume/CMakeFiles/nsv.dir/Kairos.cpp.o ../NextSubVolume/CMakeFiles/nsv.dir/Io.cpp.o ../NextSubVolume/CMakeFiles/nsv.dir/Geometry.cpp.o ../NextSubVolume/CMakeFiles/nsv.dir/nsvc.cpp.o /usr/bin/ranlib lib_pysmoldyn.a make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[1]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 91%] Built target _pysmoldyn make[1]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' /usr/bin/make -f source/python/CMakeFiles/_smoldyn.dir/build.make source/python/CMakeFiles/_smoldyn.dir/depend make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' cd /builddir/build/BUILD/Smoldyn-2.67.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/Smoldyn-2.67.3 /builddir/build/BUILD/Smoldyn-2.67.3/source/python /builddir/build/BUILD/Smoldyn-2.67.3/build /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python/CMakeFiles/_smoldyn.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' /usr/bin/make -f source/python/CMakeFiles/_smoldyn.dir/build.make source/python/CMakeFiles/_smoldyn.dir/build make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 92%] Building CXX object source/python/CMakeFiles/_smoldyn.dir/CallbackFunc.cpp.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python && /usr/bin/g++ -D_smoldyn_EXPORTS -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/builddir/build/BUILD/Smoldyn-2.67.3/source/external/pybind11/include -isystem /usr/include/python3.11 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -fPIC -fvisibility=hidden -Wno-unused-parameter -Wall -Wextra -DSMOLDYN_VERSION=2.67.3 -DENABLE_PYTHON_CALLBACK -fvisibility=hidden -flto -fno-fat-lto-objects -std=gnu++14 -MD -MT source/python/CMakeFiles/_smoldyn.dir/CallbackFunc.cpp.o -MF CMakeFiles/_smoldyn.dir/CallbackFunc.cpp.o.d -o CMakeFiles/_smoldyn.dir/CallbackFunc.cpp.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/python/CallbackFunc.cpp make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 93%] Building CXX object source/python/CMakeFiles/_smoldyn.dir/Command.cpp.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python && /usr/bin/g++ -D_smoldyn_EXPORTS -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/builddir/build/BUILD/Smoldyn-2.67.3/source/external/pybind11/include -isystem /usr/include/python3.11 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -fPIC -fvisibility=hidden -Wno-unused-parameter -Wall -Wextra -DSMOLDYN_VERSION=2.67.3 -DENABLE_PYTHON_CALLBACK -fvisibility=hidden -flto -fno-fat-lto-objects -std=gnu++14 -MD -MT source/python/CMakeFiles/_smoldyn.dir/Command.cpp.o -MF CMakeFiles/_smoldyn.dir/Command.cpp.o.d -o CMakeFiles/_smoldyn.dir/Command.cpp.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/python/Command.cpp make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 95%] Building CXX object source/python/CMakeFiles/_smoldyn.dir/Simulation.cpp.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python && /usr/bin/g++ -D_smoldyn_EXPORTS -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/builddir/build/BUILD/Smoldyn-2.67.3/source/external/pybind11/include -isystem /usr/include/python3.11 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -fPIC -fvisibility=hidden -Wno-unused-parameter -Wall -Wextra -DSMOLDYN_VERSION=2.67.3 -DENABLE_PYTHON_CALLBACK -fvisibility=hidden -flto -fno-fat-lto-objects -std=gnu++14 -MD -MT source/python/CMakeFiles/_smoldyn.dir/Simulation.cpp.o -MF CMakeFiles/_smoldyn.dir/Simulation.cpp.o.d -o CMakeFiles/_smoldyn.dir/Simulation.cpp.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/python/Simulation.cpp make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 96%] Building CXX object source/python/CMakeFiles/_smoldyn.dir/module.cpp.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python && /usr/bin/g++ -D_smoldyn_EXPORTS -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/builddir/build/BUILD/Smoldyn-2.67.3/source/external/pybind11/include -isystem /usr/include/python3.11 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -fPIC -fvisibility=hidden -Wno-unused-parameter -Wall -Wextra -DSMOLDYN_VERSION=2.67.3 -DENABLE_PYTHON_CALLBACK -fvisibility=hidden -flto -fno-fat-lto-objects -std=gnu++14 -MD -MT source/python/CMakeFiles/_smoldyn.dir/module.cpp.o -MF CMakeFiles/_smoldyn.dir/module.cpp.o.d -o CMakeFiles/_smoldyn.dir/module.cpp.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/python/module.cpp make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 97%] Linking CXX shared module /builddir/build/BUILD/Smoldyn-2.67.3/source/python/smoldyn/_smoldyn.cpython-311-i386-linux-gnu.so cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python && /usr/bin/cmake -E cmake_link_script CMakeFiles/_smoldyn.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -flto -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -o /builddir/build/BUILD/Smoldyn-2.67.3/source/python/smoldyn/_smoldyn.cpython-311-i386-linux-gnu.so CMakeFiles/_smoldyn.dir/CallbackFunc.cpp.o CMakeFiles/_smoldyn.dir/Command.cpp.o CMakeFiles/_smoldyn.dir/Simulation.cpp.o CMakeFiles/_smoldyn.dir/module.cpp.o lib_pysmoldyn.a /usr/lib/libGL.so /usr/lib/libGLU.so -lglut /usr/lib/libtiff.so /usr/lib/libz.so cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python && /usr/bin/strip /builddir/build/BUILD/Smoldyn-2.67.3/source/python/smoldyn/_smoldyn.cpython-311-i386-linux-gnu.so /builddir/build/BUILD/Smoldyn-2.67.3/source/python/../Smoldyn/smoldyn.h:1044:16: warning: type 'struct simstruct' violates the C++ One Definition Rule [-Wodr] 1044 | typedef struct simstruct | ^ /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smoldyn.h:1044:16: note: a different type is defined in another translation unit 1044 | typedef struct simstruct | ^ /builddir/build/BUILD/Smoldyn-2.67.3/source/python/../Smoldyn/smoldyn.h:1104:19: note: the first difference of corresponding definitions is field 'callbacks' 1104 | CallbackFunc* callbacks[MAX_PY_CALLBACK]; // Python callback. | ^ /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smoldyn.h:1044:16: note: a type with different number of fields is defined in another translation unit 1044 | typedef struct simstruct | ^ /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smoldyn.h:714:16: warning: type 'struct latticestruct' violates the C++ One Definition Rule [-Wodr] 714 | typedef struct latticestruct | ^ /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smoldyn.h:714:16: note: a different type is defined in another translation unit 714 | typedef struct latticestruct | ^ /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smoldyn.h:739:26: note: the first difference of corresponding definitions is field 'nsv' 739 | NextSubvolumeMethod* nsv; // nsv class | ^ /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smoldyn.h:739:26: note: a field of same name but different type is defined in another translation unit 739 | NextSubvolumeMethod* nsv; // nsv class | ^ /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smoldyn.h:714:16: note: type name 'NextSubvolumeMethod' should match type name 'Kairos::NextSubvolumeMethod' 714 | typedef struct latticestruct | ^ /builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume/NextSubvolumeMethod.h:137:7: note: the incompatible type is defined here 137 | class NextSubvolumeMethod | ^ /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolboxes.c: In function 'boxesupdatelists': /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolboxes.c:783:55: warning: argument 1 range [2147483648, 4294967294] exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 783 | bptr->neigh=(boxptr*) calloc(nneigh,sizeof(boxptr)); | ^ /usr/include/stdlib.h:556:14: note: in a call to allocation function 'calloc' declared here 556 | extern void *calloc (size_t __nmemb, size_t __size) | ^ make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[1]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 97%] Built target _smoldyn make[1]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' /usr/bin/make -f source/python/CMakeFiles/copy_python_tree.dir/build.make source/python/CMakeFiles/copy_python_tree.dir/depend /usr/bin/make -f source/python/CMakeFiles/wheel.dir/build.make source/python/CMakeFiles/wheel.dir/depend make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' cd /builddir/build/BUILD/Smoldyn-2.67.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/Smoldyn-2.67.3 /builddir/build/BUILD/Smoldyn-2.67.3/source/python /builddir/build/BUILD/Smoldyn-2.67.3/build /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python/CMakeFiles/copy_python_tree.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' /usr/bin/make -f source/python/CMakeFiles/copy_python_tree.dir/build.make source/python/CMakeFiles/copy_python_tree.dir/build make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' cd /builddir/build/BUILD/Smoldyn-2.67.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/Smoldyn-2.67.3 /builddir/build/BUILD/Smoldyn-2.67.3/source/python /builddir/build/BUILD/Smoldyn-2.67.3/build /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python/CMakeFiles/wheel.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' /usr/bin/make -f source/python/CMakeFiles/wheel.dir/build.make source/python/CMakeFiles/wheel.dir/build make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 98%] Copying python source tree to binary directory cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python && /usr/bin/cmake -E copy_directory /builddir/build/BUILD/Smoldyn-2.67.3/source/python/smoldyn /builddir/build/BUILD/Smoldyn-2.67.3/build/py/smoldyn make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[1]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [100%] Built target copy_python_tree make[1]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [100%] Generating wheel in /builddir/build/BUILD/Smoldyn-2.67.3/build cd /builddir/build/BUILD/Smoldyn-2.67.3/build/py && /usr/bin/python3.11 setup.py bdist_wheel -d /builddir/build/BUILD/Smoldyn-2.67.3/build running bdist_wheel running build running build_py creating build creating build/lib.linux-i686-cpython-311 creating build/lib.linux-i686-cpython-311/smoldyn copying smoldyn/__init__.py -> build/lib.linux-i686-cpython-311/smoldyn copying smoldyn/__main__.py -> build/lib.linux-i686-cpython-311/smoldyn copying smoldyn/smoldyn.py -> build/lib.linux-i686-cpython-311/smoldyn copying smoldyn/types.py -> build/lib.linux-i686-cpython-311/smoldyn copying smoldyn/utils.py -> build/lib.linux-i686-cpython-311/smoldyn creating build/lib.linux-i686-cpython-311/smoldyn/biosimulators copying smoldyn/biosimulators/__init__.py -> build/lib.linux-i686-cpython-311/smoldyn/biosimulators copying smoldyn/biosimulators/__main__.py -> build/lib.linux-i686-cpython-311/smoldyn/biosimulators copying smoldyn/biosimulators/_version.py -> build/lib.linux-i686-cpython-311/smoldyn/biosimulators copying smoldyn/biosimulators/combine.py -> build/lib.linux-i686-cpython-311/smoldyn/biosimulators copying smoldyn/biosimulators/data_model.py -> build/lib.linux-i686-cpython-311/smoldyn/biosimulators copying smoldyn/biosimulators/utils.py -> build/lib.linux-i686-cpython-311/smoldyn/biosimulators copying smoldyn/_smoldyn.cpython-311-i386-linux-gnu.so -> build/lib.linux-i686-cpython-311/smoldyn running build_ext installing to build/bdist.linux-i686/wheel running install running install_lib creating build/bdist.linux-i686 creating build/bdist.linux-i686/wheel creating build/bdist.linux-i686/wheel/smoldyn copying build/lib.linux-i686-cpython-311/smoldyn/_smoldyn.cpython-311-i386-linux-gnu.so -> build/bdist.linux-i686/wheel/smoldyn creating build/bdist.linux-i686/wheel/smoldyn/biosimulators copying build/lib.linux-i686-cpython-311/smoldyn/biosimulators/utils.py -> build/bdist.linux-i686/wheel/smoldyn/biosimulators copying build/lib.linux-i686-cpython-311/smoldyn/biosimulators/data_model.py -> build/bdist.linux-i686/wheel/smoldyn/biosimulators copying build/lib.linux-i686-cpython-311/smoldyn/biosimulators/combine.py -> build/bdist.linux-i686/wheel/smoldyn/biosimulators copying build/lib.linux-i686-cpython-311/smoldyn/biosimulators/_version.py -> build/bdist.linux-i686/wheel/smoldyn/biosimulators copying build/lib.linux-i686-cpython-311/smoldyn/biosimulators/__main__.py -> build/bdist.linux-i686/wheel/smoldyn/biosimulators copying build/lib.linux-i686-cpython-311/smoldyn/biosimulators/__init__.py -> build/bdist.linux-i686/wheel/smoldyn/biosimulators copying build/lib.linux-i686-cpython-311/smoldyn/utils.py -> build/bdist.linux-i686/wheel/smoldyn copying build/lib.linux-i686-cpython-311/smoldyn/types.py -> build/bdist.linux-i686/wheel/smoldyn copying build/lib.linux-i686-cpython-311/smoldyn/smoldyn.py -> build/bdist.linux-i686/wheel/smoldyn copying build/lib.linux-i686-cpython-311/smoldyn/__main__.py -> build/bdist.linux-i686/wheel/smoldyn copying build/lib.linux-i686-cpython-311/smoldyn/__init__.py -> build/bdist.linux-i686/wheel/smoldyn running install_egg_info running egg_info creating smoldyn.egg-info writing smoldyn.egg-info/PKG-INFO writing dependency_links to smoldyn.egg-info/dependency_links.txt writing requirements to smoldyn.egg-info/requires.txt writing top-level names to smoldyn.egg-info/top_level.txt writing manifest file 'smoldyn.egg-info/SOURCES.txt' reading manifest file 'smoldyn.egg-info/SOURCES.txt' writing manifest file 'smoldyn.egg-info/SOURCES.txt' Copying smoldyn.egg-info to build/bdist.linux-i686/wheel/smoldyn-2.67.3-py3.11.egg-info running install_scripts creating build/bdist.linux-i686/wheel/smoldyn-2.67.3.dist-info/WHEEL creating '/builddir/build/BUILD/Smoldyn-2.67.3/build/smoldyn-2.67.3-cp311-cp311-linux_i686.whl' and adding 'build/bdist.linux-i686/wheel' to it adding 'smoldyn/__init__.py' adding 'smoldyn/__main__.py' adding 'smoldyn/_smoldyn.cpython-311-i386-linux-gnu.so' adding 'smoldyn/smoldyn.py' adding 'smoldyn/types.py' adding 'smoldyn/utils.py' adding 'smoldyn/biosimulators/__init__.py' adding 'smoldyn/biosimulators/__main__.py' adding 'smoldyn/biosimulators/_version.py' adding 'smoldyn/biosimulators/combine.py' adding 'smoldyn/biosimulators/data_model.py' adding 'smoldyn/biosimulators/utils.py' adding 'smoldyn-2.67.3.dist-info/METADATA' adding 'smoldyn-2.67.3.dist-info/WHEEL' adding 'smoldyn-2.67.3.dist-info/top_level.txt' adding 'smoldyn-2.67.3.dist-info/RECORD' removing build/bdist.linux-i686/wheel make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' /usr/lib/python3.11/site-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. warnings.warn( make[1]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [100%] Built target wheel make[1]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/Smoldyn-2.67.3/build/CMakeFiles 0 make: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.HJY75c + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/smoldyn-2.67.3-3.fc38.i386 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/smoldyn-2.67.3-3.fc38.i386 ++ dirname /builddir/build/BUILDROOT/smoldyn-2.67.3-3.fc38.i386 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/smoldyn-2.67.3-3.fc38.i386 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib/gfortran/modules' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib/gfortran/modules' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd Smoldyn-2.67.3 + /usr/bin/make install DESTDIR=/builddir/build/BUILDROOT/smoldyn-2.67.3-3.fc38.i386 'INSTALL=/usr/bin/install -p' -C build make: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' /usr/bin/cmake -S/builddir/build/BUILD/Smoldyn-2.67.3 -B/builddir/build/BUILD/Smoldyn-2.67.3/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/Smoldyn-2.67.3/build/CMakeFiles /builddir/build/BUILD/Smoldyn-2.67.3/build//CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all make[1]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' /usr/bin/make -f source/NextSubVolume/CMakeFiles/nsv.dir/build.make source/NextSubVolume/CMakeFiles/nsv.dir/depend make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' cd /builddir/build/BUILD/Smoldyn-2.67.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/Smoldyn-2.67.3 /builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume /builddir/build/BUILD/Smoldyn-2.67.3/build /builddir/build/BUILD/Smoldyn-2.67.3/build/source/NextSubVolume /builddir/build/BUILD/Smoldyn-2.67.3/build/source/NextSubVolume/CMakeFiles/nsv.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' /usr/bin/make -f source/NextSubVolume/CMakeFiles/nsv.dir/build.make source/NextSubVolume/CMakeFiles/nsv.dir/build make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Nothing to be done for 'source/NextSubVolume/CMakeFiles/nsv.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 9%] Built target nsv /usr/bin/make -f source/libSteve/CMakeFiles/Steve.dir/build.make source/libSteve/CMakeFiles/Steve.dir/depend make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' cd /builddir/build/BUILD/Smoldyn-2.67.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/Smoldyn-2.67.3 /builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve /builddir/build/BUILD/Smoldyn-2.67.3/build /builddir/build/BUILD/Smoldyn-2.67.3/build/source/libSteve /builddir/build/BUILD/Smoldyn-2.67.3/build/source/libSteve/CMakeFiles/Steve.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' /usr/bin/make -f source/libSteve/CMakeFiles/Steve.dir/build.make source/libSteve/CMakeFiles/Steve.dir/build make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Nothing to be done for 'source/libSteve/CMakeFiles/Steve.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 29%] Built target Steve /usr/bin/make -f CMakeFiles/smoldyn_static.dir/build.make CMakeFiles/smoldyn_static.dir/depend make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' cd /builddir/build/BUILD/Smoldyn-2.67.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/Smoldyn-2.67.3 /builddir/build/BUILD/Smoldyn-2.67.3 /builddir/build/BUILD/Smoldyn-2.67.3/build /builddir/build/BUILD/Smoldyn-2.67.3/build /builddir/build/BUILD/Smoldyn-2.67.3/build/CMakeFiles/smoldyn_static.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' /usr/bin/make -f CMakeFiles/smoldyn_static.dir/build.make CMakeFiles/smoldyn_static.dir/build make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Nothing to be done for 'CMakeFiles/smoldyn_static.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 49%] Built target smoldyn_static /usr/bin/make -f CMakeFiles/smoldyn_shared.dir/build.make CMakeFiles/smoldyn_shared.dir/depend make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' cd /builddir/build/BUILD/Smoldyn-2.67.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/Smoldyn-2.67.3 /builddir/build/BUILD/Smoldyn-2.67.3 /builddir/build/BUILD/Smoldyn-2.67.3/build /builddir/build/BUILD/Smoldyn-2.67.3/build /builddir/build/BUILD/Smoldyn-2.67.3/build/CMakeFiles/smoldyn_shared.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' /usr/bin/make -f CMakeFiles/smoldyn_shared.dir/build.make CMakeFiles/smoldyn_shared.dir/build make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Nothing to be done for 'CMakeFiles/smoldyn_shared.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 69%] Built target smoldyn_shared /usr/bin/make -f CMakeFiles/smoldyn.dir/build.make CMakeFiles/smoldyn.dir/depend make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' cd /builddir/build/BUILD/Smoldyn-2.67.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/Smoldyn-2.67.3 /builddir/build/BUILD/Smoldyn-2.67.3 /builddir/build/BUILD/Smoldyn-2.67.3/build /builddir/build/BUILD/Smoldyn-2.67.3/build /builddir/build/BUILD/Smoldyn-2.67.3/build/CMakeFiles/smoldyn.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' /usr/bin/make -f CMakeFiles/smoldyn.dir/build.make CMakeFiles/smoldyn.dir/build make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Nothing to be done for 'CMakeFiles/smoldyn.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 71%] Built target smoldyn /usr/bin/make -f source/python/CMakeFiles/_pysmoldyn.dir/build.make source/python/CMakeFiles/_pysmoldyn.dir/depend make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' cd /builddir/build/BUILD/Smoldyn-2.67.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/Smoldyn-2.67.3 /builddir/build/BUILD/Smoldyn-2.67.3/source/python /builddir/build/BUILD/Smoldyn-2.67.3/build /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python/CMakeFiles/_pysmoldyn.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' /usr/bin/make -f source/python/CMakeFiles/_pysmoldyn.dir/build.make source/python/CMakeFiles/_pysmoldyn.dir/build make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Nothing to be done for 'source/python/CMakeFiles/_pysmoldyn.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 91%] Built target _pysmoldyn /usr/bin/make -f source/python/CMakeFiles/_smoldyn.dir/build.make source/python/CMakeFiles/_smoldyn.dir/depend make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' cd /builddir/build/BUILD/Smoldyn-2.67.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/Smoldyn-2.67.3 /builddir/build/BUILD/Smoldyn-2.67.3/source/python /builddir/build/BUILD/Smoldyn-2.67.3/build /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python/CMakeFiles/_smoldyn.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' /usr/bin/make -f source/python/CMakeFiles/_smoldyn.dir/build.make source/python/CMakeFiles/_smoldyn.dir/build make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Nothing to be done for 'source/python/CMakeFiles/_smoldyn.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 97%] Built target _smoldyn /usr/bin/make -f source/python/CMakeFiles/copy_python_tree.dir/build.make source/python/CMakeFiles/copy_python_tree.dir/depend make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' cd /builddir/build/BUILD/Smoldyn-2.67.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/Smoldyn-2.67.3 /builddir/build/BUILD/Smoldyn-2.67.3/source/python /builddir/build/BUILD/Smoldyn-2.67.3/build /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python/CMakeFiles/copy_python_tree.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' /usr/bin/make -f source/python/CMakeFiles/copy_python_tree.dir/build.make source/python/CMakeFiles/copy_python_tree.dir/build make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 98%] Copying python source tree to binary directory cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python && /usr/bin/cmake -E copy_directory /builddir/build/BUILD/Smoldyn-2.67.3/source/python/smoldyn /builddir/build/BUILD/Smoldyn-2.67.3/build/py/smoldyn make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 98%] Built target copy_python_tree /usr/bin/make -f source/python/CMakeFiles/wheel.dir/build.make source/python/CMakeFiles/wheel.dir/depend make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' cd /builddir/build/BUILD/Smoldyn-2.67.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/Smoldyn-2.67.3 /builddir/build/BUILD/Smoldyn-2.67.3/source/python /builddir/build/BUILD/Smoldyn-2.67.3/build /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python/CMakeFiles/wheel.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' /usr/bin/make -f source/python/CMakeFiles/wheel.dir/build.make source/python/CMakeFiles/wheel.dir/build make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [100%] Generating wheel in /builddir/build/BUILD/Smoldyn-2.67.3/build cd /builddir/build/BUILD/Smoldyn-2.67.3/build/py && /usr/bin/python3.11 setup.py bdist_wheel -d /builddir/build/BUILD/Smoldyn-2.67.3/build running bdist_wheel running build running build_py running build_ext /usr/lib/python3.11/site-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. warnings.warn( installing to build/bdist.linux-i686/wheel running install running install_lib creating build/bdist.linux-i686/wheel creating build/bdist.linux-i686/wheel/smoldyn copying build/lib.linux-i686-cpython-311/smoldyn/_smoldyn.cpython-311-i386-linux-gnu.so -> build/bdist.linux-i686/wheel/smoldyn creating build/bdist.linux-i686/wheel/smoldyn/biosimulators copying build/lib.linux-i686-cpython-311/smoldyn/biosimulators/utils.py -> build/bdist.linux-i686/wheel/smoldyn/biosimulators copying build/lib.linux-i686-cpython-311/smoldyn/biosimulators/data_model.py -> build/bdist.linux-i686/wheel/smoldyn/biosimulators copying build/lib.linux-i686-cpython-311/smoldyn/biosimulators/combine.py -> build/bdist.linux-i686/wheel/smoldyn/biosimulators copying build/lib.linux-i686-cpython-311/smoldyn/biosimulators/_version.py -> build/bdist.linux-i686/wheel/smoldyn/biosimulators copying build/lib.linux-i686-cpython-311/smoldyn/biosimulators/__main__.py -> build/bdist.linux-i686/wheel/smoldyn/biosimulators copying build/lib.linux-i686-cpython-311/smoldyn/biosimulators/__init__.py -> build/bdist.linux-i686/wheel/smoldyn/biosimulators copying build/lib.linux-i686-cpython-311/smoldyn/utils.py -> build/bdist.linux-i686/wheel/smoldyn copying build/lib.linux-i686-cpython-311/smoldyn/types.py -> build/bdist.linux-i686/wheel/smoldyn copying build/lib.linux-i686-cpython-311/smoldyn/smoldyn.py -> build/bdist.linux-i686/wheel/smoldyn copying build/lib.linux-i686-cpython-311/smoldyn/__main__.py -> build/bdist.linux-i686/wheel/smoldyn copying build/lib.linux-i686-cpython-311/smoldyn/__init__.py -> build/bdist.linux-i686/wheel/smoldyn running install_egg_info running egg_info writing smoldyn.egg-info/PKG-INFO writing dependency_links to smoldyn.egg-info/dependency_links.txt writing requirements to smoldyn.egg-info/requires.txt writing top-level names to smoldyn.egg-info/top_level.txt reading manifest file 'smoldyn.egg-info/SOURCES.txt' writing manifest file 'smoldyn.egg-info/SOURCES.txt' Copying smoldyn.egg-info to build/bdist.linux-i686/wheel/smoldyn-2.67.3-py3.11.egg-info running install_scripts creating build/bdist.linux-i686/wheel/smoldyn-2.67.3.dist-info/WHEEL creating '/builddir/build/BUILD/Smoldyn-2.67.3/build/smoldyn-2.67.3-cp311-cp311-linux_i686.whl' and adding 'build/bdist.linux-i686/wheel' to it adding 'smoldyn/__init__.py' adding 'smoldyn/__main__.py' adding 'smoldyn/_smoldyn.cpython-311-i386-linux-gnu.so' adding 'smoldyn/smoldyn.py' adding 'smoldyn/types.py' adding 'smoldyn/utils.py' adding 'smoldyn/biosimulators/__init__.py' adding 'smoldyn/biosimulators/__main__.py' adding 'smoldyn/biosimulators/_version.py' adding 'smoldyn/biosimulators/combine.py' adding 'smoldyn/biosimulators/data_model.py' adding 'smoldyn/biosimulators/utils.py' adding 'smoldyn-2.67.3.dist-info/METADATA' adding 'smoldyn-2.67.3.dist-info/WHEEL' adding 'smoldyn-2.67.3.dist-info/top_level.txt' adding 'smoldyn-2.67.3.dist-info/RECORD' removing build/bdist.linux-i686/wheel make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [100%] Built target wheel make[1]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/Smoldyn-2.67.3/build/CMakeFiles 0 /usr/bin/make -f CMakeFiles/Makefile2 preinstall make[1]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[1]: Nothing to be done for 'preinstall'. make[1]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "Release" -- Installing: /builddir/build/BUILDROOT/smoldyn-2.67.3-3.fc38.i386/usr/bin/smoldyn -- Installing: /builddir/build/BUILDROOT/smoldyn-2.67.3-3.fc38.i386/usr/lib/libsmoldyn_shared.so.2.67.3 -- Installing: /builddir/build/BUILDROOT/smoldyn-2.67.3-3.fc38.i386/usr/lib/libsmoldyn_shared.so.2 -- Installing: /builddir/build/BUILDROOT/smoldyn-2.67.3-3.fc38.i386/usr/lib/libsmoldyn_shared.so -- Installing: /builddir/build/BUILDROOT/smoldyn-2.67.3-3.fc38.i386/usr/lib/libsmoldyn_static.a -- Installing: /builddir/build/BUILDROOT/smoldyn-2.67.3-3.fc38.i386/usr/include/smoldyn/libsmoldyn.h -- Installing: /builddir/build/BUILDROOT/smoldyn-2.67.3-3.fc38.i386/usr/include/smoldyn/smoldyn.h -- Installing: /builddir/build/BUILDROOT/smoldyn-2.67.3-3.fc38.i386/usr/include/smoldyn/smoldynconfigure.h make: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' + pushd build/py ~/build/BUILD/Smoldyn-2.67.3/build/py ~/build/BUILD/Smoldyn-2.67.3 + mkdir -p /builddir/build/BUILDROOT/smoldyn-2.67.3-3.fc38.i386/usr/lib/python3.11/site-packages + cp -a smoldyn smoldyn.egg-info /builddir/build/BUILDROOT/smoldyn-2.67.3-3.fc38.i386/usr/lib/python3.11/site-packages/ + popd ~/build/BUILD/Smoldyn-2.67.3 + /usr/bin/find-debuginfo -j2 --strict-build-id -m -i --build-id-seed 2.67.3-3.fc38 --unique-debug-suffix -2.67.3-3.fc38.i386 --unique-debug-src-base smoldyn-2.67.3-3.fc38.i386 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/Smoldyn-2.67.3 extracting debug info from /builddir/build/BUILDROOT/smoldyn-2.67.3-3.fc38.i386/usr/lib/libsmoldyn_shared.so.2.67.3 extracting debug info from /builddir/build/BUILDROOT/smoldyn-2.67.3-3.fc38.i386/usr/bin/smoldyn original debug info size: 4380kB, size after compression: 4012kB /usr/bin/sepdebugcrcfix: Updated 2 CRC32s, 0 CRC32s did match. 3516 blocks + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs + /usr/lib/rpm/brp-remove-la-files + /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 Bytecompiling .py files below /builddir/build/BUILDROOT/smoldyn-2.67.3-3.fc38.i386/usr/lib/python3.11 using python3.11 + /usr/lib/rpm/redhat/brp-python-hardlink Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.XM7Sxx + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib/gfortran/modules' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib/gfortran/modules' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd Smoldyn-2.67.3 + cd build + export LD_LIBRARY_PATH=/builddir/build/BUILDROOT/smoldyn-2.67.3-3.fc38.i386/usr/lib + LD_LIBRARY_PATH=/builddir/build/BUILDROOT/smoldyn-2.67.3-3.fc38.i386/usr/lib + export PYTHONPATH=/builddir/build/BUILDROOT/smoldyn-2.67.3-3.fc38.i386/usr/lib/python3.11/site-packages + PYTHONPATH=/builddir/build/BUILDROOT/smoldyn-2.67.3-3.fc38.i386/usr/lib/python3.11/site-packages + xvfb-run ctest -j1 -VV -R 'test_api|test_sanity|test_biosimulator' --output-on-failure --debug /builddir/build/BUILD/cmake-3.25.1/Source/cmCTest.cxx:420 Here: 420 /builddir/build/BUILD/cmake-3.25.1/Source/cmCTest.cxx:705 UpdateCTestConfiguration from :/builddir/build/BUILD/Smoldyn-2.67.3/build/DartConfiguration.tcl /builddir/build/BUILD/cmake-3.25.1/Source/cmCTest.cxx:432 Here: 432 /builddir/build/BUILD/cmake-3.25.1/Source/cmCTest.cxx:3014 * Read custom CTest configuration directory: /builddir/build/BUILD/Smoldyn-2.67.3/build /builddir/build/BUILD/cmake-3.25.1/Source/cmCTest.cxx:3019 * Check for file: /builddir/build/BUILD/Smoldyn-2.67.3/build/CTestCustom.cmake /builddir/build/BUILD/cmake-3.25.1/Source/cmCTest.cxx:3039 * Check for file: /builddir/build/BUILD/Smoldyn-2.67.3/build/CTestCustom.ctest /builddir/build/BUILD/cmake-3.25.1/Source/cmCTest.cxx:705 UpdateCTestConfiguration from :/builddir/build/BUILD/Smoldyn-2.67.3/build/DartConfiguration.tcl /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestTestHandler.cxx:402 Test project /builddir/build/BUILD/Smoldyn-2.67.3/build /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestTestHandler.cxx:1782 Constructing a list of tests /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestTestHandler.cxx:2386 Add test: test_actions /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestTestHandler.cxx:2429 Set test directory: /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestTestHandler.cxx:2386 Add test: test_api /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestTestHandler.cxx:2429 Set test directory: /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestTestHandler.cxx:2386 Add test: test_biosimulators /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestTestHandler.cxx:2429 Set test directory: /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestTestHandler.cxx:2386 Add test: test_concurrent_simulation /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestTestHandler.cxx:2429 Set test directory: /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestTestHandler.cxx:2386 Add test: test_connect_func /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestTestHandler.cxx:2429 Set test directory: /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestTestHandler.cxx:2386 Add test: test_connect_var /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestTestHandler.cxx:2429 Set test directory: /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestTestHandler.cxx:2386 Add test: test_data_in_array /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestTestHandler.cxx:2429 Set test directory: /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestTestHandler.cxx:2386 Add test: test_data_outputfile /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestTestHandler.cxx:2429 Set test directory: /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestTestHandler.cxx:2386 Add test: test_getters /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestTestHandler.cxx:2429 Set test directory: /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestTestHandler.cxx:2386 Add test: test_issue_118 /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestTestHandler.cxx:2429 Set test directory: /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestTestHandler.cxx:2386 Add test: test_libsmoldyn /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestTestHandler.cxx:2429 Set test directory: /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestTestHandler.cxx:2386 Add test: test_multiple_iterations /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestTestHandler.cxx:2429 Set test directory: /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestTestHandler.cxx:2386 Add test: test_prd_placement /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestTestHandler.cxx:2429 Set test directory: /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestTestHandler.cxx:2386 Add test: test_sanity /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestTestHandler.cxx:2429 Set test directory: /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestTestHandler.cxx:2386 Add test: test_sim_from_file /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestTestHandler.cxx:2429 Set test directory: /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestTestHandler.cxx:1833 Done constructing a list of tests /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestTestHandler.cxx:977 Updating test list for fixtures /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestTestHandler.cxx:1200 Added 0 tests to meet fixture requirements /builddir/build/BUILD/cmake-3.25.1/Source/cmCTest.cxx:306 Current_Time: Dec 29 16:49 UTC /builddir/build/BUILD/cmake-3.25.1/Source/cmCTest.cxx:306 Current_Time: Dec 29 16:49 UTC /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestMultiProcessHandler.cxx:1412 Checking test dependency graph... /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestMultiProcessHandler.cxx:1441 Checking test dependency graph end /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestMultiProcessHandler.cxx:167 test 2 /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestRunTest.cxx:518 Start 2: test_api /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestRunTest.cxx:687 2: Test command: /usr/bin/python3.11 "/builddir/build/BUILD/Smoldyn-2.67.3/tests/test_api.py" /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestRunTest.cxx:695 2: Working Directory: /builddir/build/BUILD/Smoldyn-2.67.3/tests /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestRunTest.cxx:703 2: Environment variables: /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestRunTest.cxx:708 2: PYTHONPATH=/builddir/build/BUILD/Smoldyn-2.67.3/build/py /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestRunTest.cxx:708 2: SMOLDYN_NO_PROMPT=1 /builddir/build/BUILD/cmake-3.25.1/Source/cmCTest.cxx:306 Current_Time: Dec 29 16:49 UTC /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestRunTest.cxx:777 2: Test timeout computed to be: 10000000 /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestRunTest.cxx:949 1/3 Test #2: test_api ......................... /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestRunTest.cxx:952 Testing test_api ... /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestRunTest.cxx:255 Passed 0.23 sec /builddir/build/BUILD/cmake-3.25.1/Source/cmCTest.cxx:306 Current_Time: Dec 29 16:49 UTC /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestMultiProcessHandler.cxx:167 test 3 /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestRunTest.cxx:518 Start 3: test_biosimulators /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestRunTest.cxx:687 3: Test command: /usr/bin/python3.11 "/builddir/build/BUILD/Smoldyn-2.67.3/tests/test_biosimulators.py" /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestRunTest.cxx:695 3: Working Directory: /builddir/build/BUILD/Smoldyn-2.67.3/tests /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestRunTest.cxx:703 3: Environment variables: /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestRunTest.cxx:708 3: PYTHONPATH=/builddir/build/BUILD/Smoldyn-2.67.3/build/py /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestRunTest.cxx:708 3: SMOLDYN_NO_PROMPT=1 /builddir/build/BUILD/cmake-3.25.1/Source/cmCTest.cxx:306 Current_Time: Dec 29 16:49 UTC /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestRunTest.cxx:777 3: Test timeout computed to be: 10000000 /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestRunTest.cxx:42 3: ssssssssssssssssssssssss /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestRunTest.cxx:42 3: ---------------------------------------------------------------------- /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestRunTest.cxx:42 3: Ran 24 tests in 0.001s /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestRunTest.cxx:42 3: /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestRunTest.cxx:42 3: OK (skipped=24) /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestRunTest.cxx:949 2/3 Test #3: test_biosimulators ............... /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestRunTest.cxx:952 Testing test_biosimulators ... /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestRunTest.cxx:255 Passed 0.26 sec /builddir/build/BUILD/cmake-3.25.1/Source/cmCTest.cxx:306 Current_Time: Dec 29 16:49 UTC /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestMultiProcessHandler.cxx:167 test 14 /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestRunTest.cxx:518 Start 14: test_sanity /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestRunTest.cxx:687 14: Test command: /usr/bin/python3.11 "/builddir/build/BUILD/Smoldyn-2.67.3/tests/test_sanity.py" /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestRunTest.cxx:695 14: Working Directory: /builddir/build/BUILD/Smoldyn-2.67.3/tests /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestRunTest.cxx:703 14: Environment variables: /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestRunTest.cxx:708 14: PYTHONPATH=/builddir/build/BUILD/Smoldyn-2.67.3/build/py /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestRunTest.cxx:708 14: SMOLDYN_NO_PROMPT=1 /builddir/build/BUILD/cmake-3.25.1/Source/cmCTest.cxx:306 Current_Time: Dec 29 16:49 UTC /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestRunTest.cxx:777 14: Test timeout computed to be: 10000000 /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestRunTest.cxx:42 14: Using smoldyn from /builddir/build/BUILD/Smoldyn-2.67.3/build/py/smoldyn/__init__.py /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestRunTest.cxx:42 14: test_newcursim /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestRunTest.cxx:42 14: /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestRunTest.cxx:42 14: Testing test_get_err /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestRunTest.cxx:42 14: (, '') /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestRunTest.cxx:949 3/3 Test #14: test_sanity ...................... /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestRunTest.cxx:952 Testing test_sanity ... /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestRunTest.cxx:255 Passed 0.21 sec /builddir/build/BUILD/cmake-3.25.1/Source/cmCTest.cxx:306 Current_Time: Dec 29 16:49 UTC /builddir/build/BUILD/cmake-3.25.1/Source/cmCTest.cxx:306 Current_Time: Dec 29 16:49 UTC /builddir/build/BUILD/cmake-3.25.1/Source/cmCTest.cxx:306 Current_Time: Dec 29 16:49 UTC /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestTestHandler.cxx:441 The following tests passed: /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestTestHandler.cxx:446 test_api /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestTestHandler.cxx:446 test_biosimulators /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestTestHandler.cxx:446 test_sanity /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestTestHandler.cxx:606 100% tests passed, 0 tests failed out of 3 /builddir/build/BUILD/cmake-3.25.1/Source/CTest/cmCTestTestHandler.cxx:622 Total Test time (real) = 0.70 sec + RPM_EC=0 ++ jobs -p + exit 0 Processing files: smoldyn-2.67.3-3.fc38.i686 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.DQ2MyG + umask 022 + cd /builddir/build/BUILD + cd Smoldyn-2.67.3 + DOCDIR=/builddir/build/BUILDROOT/smoldyn-2.67.3-3.fc38.i386/usr/share/doc/smoldyn + export LC_ALL=C + LC_ALL=C + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/smoldyn-2.67.3-3.fc38.i386/usr/share/doc/smoldyn + cp -pr Using-Smoldyn-with-SED-ML-COMBINE-BioSimulators.md /builddir/build/BUILDROOT/smoldyn-2.67.3-3.fc38.i386/usr/share/doc/smoldyn + cp -pr README.md /builddir/build/BUILDROOT/smoldyn-2.67.3-3.fc38.i386/usr/share/doc/smoldyn + RPM_EC=0 ++ jobs -p + exit 0 Provides: bundled(SFMT) = 1.3.3 smoldyn = 2.67.3-3.fc38 smoldyn(x86-32) = 2.67.3-3.fc38 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libc.so.6 libc.so.6(GLIBC_2.0) libc.so.6(GLIBC_2.1.3) libc.so.6(GLIBC_2.3.4) libc.so.6(GLIBC_2.34) libc.so.6(GLIBC_2.4) libgcc_s.so.1 libgcc_s.so.1(GCC_3.0) libsmoldyn_shared.so.2 libstdc++.so.6 libstdc++.so.6(CXXABI_1.3) rtld(GNU_HASH) Processing files: smoldyn-doc-2.67.3-3.fc38.noarch Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.bqlTJ7 + umask 022 + cd /builddir/build/BUILD + cd Smoldyn-2.67.3 + DOCDIR=/builddir/build/BUILDROOT/smoldyn-2.67.3-3.fc38.i386/usr/share/doc/smoldyn-doc + export LC_ALL=C + LC_ALL=C + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/smoldyn-2.67.3-3.fc38.i386/usr/share/doc/smoldyn-doc + cp -pr docs/BioNetGen docs/CMakeLists.txt docs/Doxyfile.in docs/README.md docs/SmolCrowd docs/SmolEmulate docs/Smoldyn docs/_static docs/build_doxygen docs/conf.py docs/doxygen docs/examples docs/index.rst docs/libSteve docs/python docs/requirements.txt docs/tikz docs/user docs/wrl2smol /builddir/build/BUILDROOT/smoldyn-2.67.3-3.fc38.i386/usr/share/doc/smoldyn-doc + RPM_EC=0 ++ jobs -p + exit 0 Provides: smoldyn-doc = 2.67.3-3.fc38 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: smoldyn-libs-2.67.3-3.fc38.i686 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.9NanFp + umask 022 + cd /builddir/build/BUILD + cd Smoldyn-2.67.3 + LICENSEDIR=/builddir/build/BUILDROOT/smoldyn-2.67.3-3.fc38.i386/usr/share/licenses/smoldyn-libs + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/smoldyn-2.67.3-3.fc38.i386/usr/share/licenses/smoldyn-libs + cp -pr License.txt /builddir/build/BUILDROOT/smoldyn-2.67.3-3.fc38.i386/usr/share/licenses/smoldyn-libs + cp -pr source/libSteve/SFMT/SFMT-LICENSE.txt /builddir/build/BUILDROOT/smoldyn-2.67.3-3.fc38.i386/usr/share/licenses/smoldyn-libs + cp -pr LICENSE /builddir/build/BUILDROOT/smoldyn-2.67.3-3.fc38.i386/usr/share/licenses/smoldyn-libs + RPM_EC=0 ++ jobs -p + exit 0 Provides: libsmoldyn_shared.so.2 smoldyn-libs = 2.67.3-3.fc38 smoldyn-libs(x86-32) = 2.67.3-3.fc38 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libGL.so.1 libGLU.so.1 libc.so.6 libc.so.6(GLIBC_2.0) libc.so.6(GLIBC_2.1) libc.so.6(GLIBC_2.1.3) libc.so.6(GLIBC_2.3) libc.so.6(GLIBC_2.3.4) libc.so.6(GLIBC_2.4) libc.so.6(GLIBC_2.7) libgcc_s.so.1 libgcc_s.so.1(GCC_3.0) libgcc_s.so.1(GCC_3.3.1) libgcc_s.so.1(GLIBC_2.0) libglut.so.3 libm.so.6 libm.so.6(GLIBC_2.0) libm.so.6(GLIBC_2.1) libm.so.6(GLIBC_2.29) libstdc++.so.6 libstdc++.so.6(CXXABI_1.3) libstdc++.so.6(CXXABI_1.3.8) libstdc++.so.6(CXXABI_1.3.9) libstdc++.so.6(GLIBCXX_3.4) libstdc++.so.6(GLIBCXX_3.4.11) libstdc++.so.6(GLIBCXX_3.4.21) libstdc++.so.6(GLIBCXX_3.4.29) libstdc++.so.6(GLIBCXX_3.4.30) libstdc++.so.6(GLIBCXX_3.4.9) libtiff.so.5 libtiff.so.5(LIBTIFF_4.0) rtld(GNU_HASH) Processing files: smoldyn-libs-devel-2.67.3-3.fc38.i686 Provides: smoldyn-libs-devel = 2.67.3-3.fc38 smoldyn-libs-devel(x86-32) = 2.67.3-3.fc38 smoldyn-libs-static = 0:2.67.3-3.fc38 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libsmoldyn_shared.so.2 Processing files: python3-smoldyn-2.67.3-3.fc38.i686 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.aN6Hpv + umask 022 + cd /builddir/build/BUILD + cd Smoldyn-2.67.3 + LICENSEDIR=/builddir/build/BUILDROOT/smoldyn-2.67.3-3.fc38.i386/usr/share/licenses/python3-smoldyn + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/smoldyn-2.67.3-3.fc38.i386/usr/share/licenses/python3-smoldyn + cp -pr License.txt /builddir/build/BUILDROOT/smoldyn-2.67.3-3.fc38.i386/usr/share/licenses/python3-smoldyn + cp -pr source/libSteve/SFMT/SFMT-LICENSE.txt /builddir/build/BUILDROOT/smoldyn-2.67.3-3.fc38.i386/usr/share/licenses/python3-smoldyn + cp -pr LICENSE /builddir/build/BUILDROOT/smoldyn-2.67.3-3.fc38.i386/usr/share/licenses/python3-smoldyn + RPM_EC=0 ++ jobs -p + exit 0 Provides: python-smoldyn = 2.67.3-3.fc38 python3-smoldyn = 2.67.3-3.fc38 python3-smoldyn(x86-32) = 2.67.3-3.fc38 python3.11-smoldyn = 2.67.3-3.fc38 python3.11dist(smoldyn) = 2.67.3 python3dist(smoldyn) = 2.67.3 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libGL.so.1 libGLU.so.1 libc.so.6 libc.so.6(GLIBC_2.0) libc.so.6(GLIBC_2.1) libc.so.6(GLIBC_2.1.3) libc.so.6(GLIBC_2.3) libc.so.6(GLIBC_2.3.4) libc.so.6(GLIBC_2.32) libc.so.6(GLIBC_2.4) libc.so.6(GLIBC_2.7) libgcc_s.so.1 libgcc_s.so.1(GCC_3.0) libgcc_s.so.1(GCC_3.3.1) libgcc_s.so.1(GLIBC_2.0) libglut.so.3 libm.so.6 libm.so.6(GLIBC_2.0) libm.so.6(GLIBC_2.1) libm.so.6(GLIBC_2.29) libstdc++.so.6 libstdc++.so.6(CXXABI_1.3) libstdc++.so.6(CXXABI_1.3.13) libstdc++.so.6(CXXABI_1.3.2) libstdc++.so.6(CXXABI_1.3.3) libstdc++.so.6(CXXABI_1.3.5) libstdc++.so.6(CXXABI_1.3.8) libstdc++.so.6(CXXABI_1.3.9) libstdc++.so.6(GLIBCXX_3.4) libstdc++.so.6(GLIBCXX_3.4.11) libstdc++.so.6(GLIBCXX_3.4.18) libstdc++.so.6(GLIBCXX_3.4.20) libstdc++.so.6(GLIBCXX_3.4.21) libstdc++.so.6(GLIBCXX_3.4.29) libstdc++.so.6(GLIBCXX_3.4.30) libstdc++.so.6(GLIBCXX_3.4.9) libtiff.so.5 libtiff.so.5(LIBTIFF_4.0) python(abi) = 3.11 rtld(GNU_HASH) Obsoletes: python-smoldyn < 2.67.3-3.fc38 Processing files: smoldyn-debugsource-2.67.3-3.fc38.i686 Provides: smoldyn-debugsource = 2.67.3-3.fc38 smoldyn-debugsource(x86-32) = 2.67.3-3.fc38 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: smoldyn-debuginfo-2.67.3-3.fc38.i686 Provides: debuginfo(build-id) = c50f28f809c65735035428ddadf1f8e2e3ada3b1 smoldyn-debuginfo = 2.67.3-3.fc38 smoldyn-debuginfo(x86-32) = 2.67.3-3.fc38 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: smoldyn-debugsource(x86-32) = 2.67.3-3.fc38 Processing files: smoldyn-libs-debuginfo-2.67.3-3.fc38.i686 Provides: debuginfo(build-id) = 77977ad052af0b7ce6d13a6d1fb3b1eee78ae664 libsmoldyn_shared.so.2.67.3-2.67.3-3.fc38.i386.debug smoldyn-libs-debuginfo = 2.67.3-3.fc38 smoldyn-libs-debuginfo(x86-32) = 2.67.3-3.fc38 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: smoldyn-debugsource(x86-32) = 2.67.3-3.fc38 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/smoldyn-2.67.3-3.fc38.i386 Wrote: /builddir/build/RPMS/smoldyn-libs-debuginfo-2.67.3-3.fc38.i686.rpm Wrote: /builddir/build/RPMS/python3-smoldyn-2.67.3-3.fc38.i686.rpm Wrote: /builddir/build/RPMS/smoldyn-libs-devel-2.67.3-3.fc38.i686.rpm Wrote: /builddir/build/RPMS/smoldyn-debugsource-2.67.3-3.fc38.i686.rpm Wrote: /builddir/build/RPMS/smoldyn-libs-2.67.3-3.fc38.i686.rpm Wrote: /builddir/build/RPMS/smoldyn-debuginfo-2.67.3-3.fc38.i686.rpm Wrote: /builddir/build/RPMS/smoldyn-2.67.3-3.fc38.i686.rpm Wrote: /builddir/build/RPMS/smoldyn-doc-2.67.3-3.fc38.noarch.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.KXFWYz + umask 022 + cd /builddir/build/BUILD + cd Smoldyn-2.67.3 + /usr/bin/rm -rf /builddir/build/BUILDROOT/smoldyn-2.67.3-3.fc38.i386 + RPM_EC=0 ++ jobs -p + exit 0 Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.9usSNK + umask 022 + cd /builddir/build/BUILD + rm -rf Smoldyn-2.67.3 Smoldyn-2.67.3.gemspec + RPM_EC=0 ++ jobs -p + exit 0 Finish: rpmbuild smoldyn-2.67.3-3.fc38.src.rpm Finish: build phase for smoldyn-2.67.3-3.fc38.src.rpm INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-i686-1672332313.507491/root/var/log/dnf.rpm.log /var/lib/mock/fedora-rawhide-i686-1672332313.507491/root/var/log/dnf.librepo.log /var/lib/mock/fedora-rawhide-i686-1672332313.507491/root/var/log/dnf.log INFO: Done(/var/lib/copr-rpmbuild/results/smoldyn-2.67.3-3.fc38.src.rpm) Config(child) 2 minutes 48 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool