Mock Version: 3.5
ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target ppc64le --nodeps /builddir/build/SPECS/staden-io_lib.spec'], chrootPath='/var/lib/mock/fedora-rawhide-ppc64le-1672322243.673570/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=<mockbuild.trace_decorator.getLog object at 0x7fff8fb4bb50>timeout=0uid=1001gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.23v2v_gz:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueprintOutput=True)
Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.23v2v_gz:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']
Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', 'e9ffb8e8567141489d6190e6fbe71b42', '-D', '/var/lib/mock/fedora-rawhide-ppc64le-1672322243.673570/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.23v2v_gz:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;<mock-chroot>\\007"', '--setenv=PS1=<mock-chroot> \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target ppc64le --nodeps /builddir/build/SPECS/staden-io_lib.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False
Building target platforms: ppc64le
Building for target ppc64le
setting SOURCE_DATE_EPOCH=1658534400
Wrote: /builddir/build/SRPMS/staden-io_lib-1.12.4-24.fc38.src.rpm
Child return code was: 0
ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target ppc64le --nodeps /builddir/build/SPECS/staden-io_lib.spec'], chrootPath='/var/lib/mock/fedora-rawhide-ppc64le-1672322243.673570/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=<mockbuild.trace_decorator.getLog object at 0x7fff8fb4bb50>timeout=0uid=1001gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.23v2v_gz:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueprintOutput=True)
Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.23v2v_gz:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']
Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '265bd411b9a64d6aa9bdcdea80a18a51', '-D', '/var/lib/mock/fedora-rawhide-ppc64le-1672322243.673570/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.23v2v_gz:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;<mock-chroot>\\007"', '--setenv=PS1=<mock-chroot> \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target ppc64le --nodeps /builddir/build/SPECS/staden-io_lib.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False
Building target platforms: ppc64le
Building for target ppc64le
setting SOURCE_DATE_EPOCH=1658534400
Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.FQdrDp
+ umask 022
+ cd /builddir/build/BUILD
+ cd /builddir/build/BUILD
+ rm -rf io_lib-1.12.4
+ /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/io_lib-1.12.4.tar.gz
+ STATUS=0
+ '[' 0 -ne 0 ']'
+ cd io_lib-1.12.4
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w .
+ /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/staden-libs-config.patch
+ /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f
+ mv io_lib-config.in staden-io_lib-config.in
+ sed -i s/libread/libstaden-read/g io_lib/Makefile.in progs/Makefile.in
+ sed -i s/lread/lstaden-read/ staden-io_lib-config.in
+ sed -i s/io_lib-config/staden-io_lib-config/g configure Makefile.in
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.5fhKzn
+ umask 022
+ cd /builddir/build/BUILD
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection'
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection'
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules'
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules'
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes'
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd io_lib-1.12.4
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection'
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection'
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules'
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules'
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes'
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ '[' '-flto=auto -ffat-lto-objectsx' '!=' x ']'
++ find . -type f -name configure -print
+ for file in $(find . -type f -name configure -print)
+ /usr/bin/sed -r --in-place=.backup 's/^char \(\*f\) \(\) = /__attribute__ ((used)) char (*f) () = /g' ./configure
+ diff -u ./configure.backup ./configure
+ mv ./configure.backup ./configure
+ /usr/bin/sed -r --in-place=.backup 's/^char \(\*f\) \(\);/__attribute__ ((used)) char (*f) ();/g' ./configure
+ diff -u ./configure.backup ./configure
+ mv ./configure.backup ./configure
+ /usr/bin/sed -r --in-place=.backup 's/^char \$2 \(\);/__attribute__ ((used)) char \$2 ();/g' ./configure
+ diff -u ./configure.backup ./configure
--- ./configure.backup 2022-12-29 14:00:10.433147377 +0000
+++ ./configure 2022-12-29 14:00:10.463146517 +0000
@@ -1943,7 +1943,7 @@
#ifdef __cplusplus
extern "C"
#endif
-char $2 ();
+__attribute__ ((used)) char $2 ();
/* The GNU C library defines this for functions which it implements
to always fail with ENOSYS. Some functions are actually named
something starting with __ and the normal name is an alias. */
+ /usr/bin/sed --in-place=.backup '1{$!N;$!N};$!N;s/int x = 1;\nint y = 0;\nint z;\nint nan;/volatile int x = 1; volatile int y = 0; volatile int z, nan;/;P;D' ./configure
+ diff -u ./configure.backup ./configure
+ mv ./configure.backup ./configure
+ /usr/bin/sed --in-place=.backup 's#^lt_cv_sys_global_symbol_to_cdecl=.*#lt_cv_sys_global_symbol_to_cdecl="sed -n -e '\''s/^T .* \\(.*\\)$/extern int \\1();/p'\'' -e '\''s/^$symcode* .* \\(.*\\)$/extern char \\1;/p'\''"#' ./configure
+ diff -u ./configure.backup ./configure
--- ./configure.backup 2022-12-29 14:00:10.463146517 +0000
+++ ./configure 2022-12-29 14:00:10.493145657 +0000
@@ -6307,7 +6307,7 @@
sympat='\([_A-Za-z][_A-Za-z0-9]*\)'
# Transform an extracted symbol line into a proper C declaration
-lt_cv_sys_global_symbol_to_cdecl="sed -n -e 's/^. .* \(.*\)$/extern int \1;/p'"
+lt_cv_sys_global_symbol_to_cdecl="sed -n -e 's/^T .* \(.*\)$/extern int \1();/p' -e 's/^$symcode* .* \(.*\)$/extern char \1;/p'"
# Transform an extracted symbol line into symbol name and symbol address
lt_cv_sys_global_symbol_to_c_name_address="sed -n -e 's/^: \([^ ]*\) $/ {\\\"\1\\\", (lt_ptr) 0},/p' -e 's/^$symcode \([^ ]*\) \([^ ]*\)$/ {\"\2\", (lt_ptr) \&\2},/p'"
+ '[' 1 = 1 ']'
+++ dirname ./configure
++ find . -name config.guess -o -name config.sub
+ for i in $(find $(dirname ./configure) -name config.guess -o -name config.sub)
++ basename ./config.sub
+ '[' -f /usr/lib/rpm/redhat/config.sub ']'
+ /usr/bin/rm -f ./config.sub
++ basename ./config.sub
+ /usr/bin/cp -fv /usr/lib/rpm/redhat/config.sub ./config.sub
'/usr/lib/rpm/redhat/config.sub' -> './config.sub'
+ for i in $(find $(dirname ./configure) -name config.guess -o -name config.sub)
++ basename ./config.guess
+ '[' -f /usr/lib/rpm/redhat/config.guess ']'
+ /usr/bin/rm -f ./config.guess
++ basename ./config.guess
+ /usr/bin/cp -fv /usr/lib/rpm/redhat/config.guess ./config.guess
'/usr/lib/rpm/redhat/config.guess' -> './config.guess'
+ '[' 1 = 1 ']'
+ '[' x '!=' 'x-Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' ']'
++ find . -name ltmain.sh
+ for i in $(find . -name ltmain.sh)
+ /usr/bin/sed -i.backup -e 's~compiler_flags=$~compiler_flags="-Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld"~' ./ltmain.sh
++ grep -q runstatedir=DIR ./configure
+ ./configure --build=powerpc64le-redhat-linux-gnu --host=powerpc64le-redhat-linux-gnu --program-prefix= --disable-dependency-tracking --prefix=/usr --exec-prefix=/usr --bindir=/usr/bin --sbindir=/usr/sbin --sysconfdir=/etc --datadir=/usr/share --includedir=/usr/include --libdir=/usr/lib64 --libexecdir=/usr/libexec --localstatedir=/var --sharedstatedir=/var/lib --mandir=/usr/share/man --infodir=/usr/share/info --disable-static
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
checking whether to enable maintainer-specific portions of Makefiles... no
checking for powerpc64le-redhat-linux-gnu-gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking for style of include used by make... GNU
checking dependency style of gcc... none
checking build system type... powerpc64le-redhat-linux-gnu
checking host system type... powerpc64le-redhat-linux-gnu
checking for a sed that does not truncate output... /usr/bin/sed
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for ld used by gcc... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for /usr/bin/ld option to reload object files... -r
checking for BSD-compatible nm... /usr/bin/nm -B
checking whether ln -s works... yes
checking how to recognise dependent libraries... pass_all
checking how to run the C preprocessor... gcc -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking dlfcn.h usability... yes
checking dlfcn.h presence... yes
checking for dlfcn.h... yes
checking whether we are using the GNU C++ compiler... no
checking whether g++ accepts -g... no
checking dependency style of g++... none
checking for powerpc64le-redhat-linux-gnu-g77... no
checking for powerpc64le-redhat-linux-gnu-xlf... no
checking for powerpc64le-redhat-linux-gnu-f77... no
checking for powerpc64le-redhat-linux-gnu-frt... no
checking for powerpc64le-redhat-linux-gnu-pgf77... no
checking for powerpc64le-redhat-linux-gnu-cf77... no
checking for powerpc64le-redhat-linux-gnu-fort77... no
checking for powerpc64le-redhat-linux-gnu-fl32... no
checking for powerpc64le-redhat-linux-gnu-af77... no
checking for powerpc64le-redhat-linux-gnu-xlf90... no
checking for powerpc64le-redhat-linux-gnu-f90... no
checking for powerpc64le-redhat-linux-gnu-pgf90... no
checking for powerpc64le-redhat-linux-gnu-pghpf... no
checking for powerpc64le-redhat-linux-gnu-epcf90... no
checking for powerpc64le-redhat-linux-gnu-gfortran... no
checking for powerpc64le-redhat-linux-gnu-g95... no
checking for powerpc64le-redhat-linux-gnu-xlf95... no
checking for powerpc64le-redhat-linux-gnu-f95... no
checking for powerpc64le-redhat-linux-gnu-fort... no
checking for powerpc64le-redhat-linux-gnu-ifort... no
checking for powerpc64le-redhat-linux-gnu-ifc... no
checking for powerpc64le-redhat-linux-gnu-efc... no
checking for powerpc64le-redhat-linux-gnu-pgf95... no
checking for powerpc64le-redhat-linux-gnu-lf95... no
checking for powerpc64le-redhat-linux-gnu-ftn... no
checking for g77... no
checking for xlf... no
checking for f77... no
checking for frt... no
checking for pgf77... no
checking for cf77... no
checking for fort77... no
checking for fl32... no
checking for af77... no
checking for xlf90... no
checking for f90... no
checking for pgf90... no
checking for pghpf... no
checking for epcf90... no
checking for gfortran... no
checking for g95... no
checking for xlf95... no
checking for f95... no
checking for fort... no
checking for ifort... no
checking for ifc... no
checking for efc... no
checking for pgf95... no
checking for lf95... no
checking for ftn... no
checking whether we are using the GNU Fortran 77 compiler... no
checking whether accepts -g... no
checking the maximum length of command line arguments... 262144
checking command to parse /usr/bin/nm -B output from gcc object... ok
checking for objdir... .libs
checking for powerpc64le-redhat-linux-gnu-ar... no
checking for ar... ar
checking for powerpc64le-redhat-linux-gnu-ranlib... no
checking for ranlib... ranlib
checking for powerpc64le-redhat-linux-gnu-strip... no
checking for strip... strip
checking if gcc supports -fno-rtti -fno-exceptions... no
checking for gcc option to produce PIC... -fPIC
checking if gcc PIC flag -fPIC works... yes
checking if gcc static flag -static works... no
checking if gcc supports -c -o file.o... yes
checking whether the gcc linker (/usr/bin/ld -m elf64ppc) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... cat: 'ld.so.conf.d/*.conf': No such file or directory
GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
configure: creating libtool
appending configuration tag "CXX" to libtool
appending configuration tag "F77" to libtool
host=powerpc64le-redhat-linux-gnu
Fixing libtool for -rpath problems.
checking for gawk... (cached) gawk
checking for curl-config... /usr/bin/curl-config
checking for the version of libcurl... 7.87.0
checking whether libcurl just needs -lcurl... yes
checking whether libcurl is usable... yes
checking for curl_free... yes
checking for inflateEnd in -lz... yes
checking zlib.h usability... yes
checking zlib.h presence... yes
checking for zlib.h... yes
checking for library containing gethostbyname... none required
checking for library containing socket... none required
checking whether byte ordering is bigendian... no
checking for ANSI C header files... (cached) yes
checking for sys/wait.h that is POSIX.1 compatible... yes
checking fcntl.h usability... yes
checking fcntl.h presence... yes
checking for fcntl.h... yes
checking limits.h usability... yes
checking limits.h presence... yes
checking for limits.h... yes
checking for unistd.h... (cached) yes
checking for zlib.h... (cached) yes
checking whether byte ordering is bigendian... (cached) no
checking size of short... 2
checking size of int... 4
checking size of long... 8
checking for inline... inline
checking for mode_t... yes
checking for special C compiler options needed for large files... no
checking for _FILE_OFFSET_BITS value needed for large files... no
checking for _LARGEFILE_SOURCE value needed for large files... no
checking for library containing cos... -lm
checking for strdup... yes
configure: creating ./config.status
config.status: creating Makefile
config.status: creating io_lib/Makefile
config.status: creating progs/Makefile
config.status: creating tests/Makefile
config.status: creating staden-io_lib-config
config.status: creating io_lib/os.h
config.status: creating io_lib_config.h
config.status: executing depfiles commands
+ sed -i 's+\(search_path_spec=\"\)+\1/lib64 /usr/lib64 +' libtool
+ /usr/bin/make -O -j5 V=1 VERBOSE=1
/usr/bin/make all-recursive
Making all in io_lib
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-scf_extras.lo `test -f 'scf_extras.c' || echo './'`scf_extras.c
mkdir .libs
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c scf_extras.c -fPIC -DPIC -o .libs/libstaden_read_la-scf_extras.o
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-Read.lo `test -f 'Read.c' || echo './'`Read.c
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c Read.c -fPIC -DPIC -o .libs/libstaden_read_la-Read.o
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-ztr.lo `test -f 'ztr.c' || echo './'`ztr.c
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c ztr.c -fPIC -DPIC -o .libs/libstaden_read_la-ztr.o
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
ztr.c: In function 'mfread_ztr':
ztr.c:335:12: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
335 | while (chunk = ztr_read_chunk_hdr(fp)) {
| ^~~~~
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-translate.lo `test -f 'translate.c' || echo './'`translate.c
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c translate.c -fPIC -DPIC -o .libs/libstaden_read_la-translate.o
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
translate.c: In function 'read2exp':
translate.c:292:13: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
292 | if (p = strrchr(EN, '/'))
| ^
translate.c:302:17: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
302 | if (cp = strrchr(read->trace_name, '/'))
| ^~
translate.c: In function 'exp2read':
translate.c:650:13: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
650 | if (fp = open_trace_file(exp_get_entry(e, EFLT_LN), fn)) {
| ^~
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-fpoint.lo `test -f 'fpoint.c' || echo './'`fpoint.c
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c fpoint.c -fPIC -DPIC -o .libs/libstaden_read_la-fpoint.o
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-seqIOALF.lo `test -f 'seqIOALF.c' || echo './'`seqIOALF.c
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c seqIOALF.c -fPIC -DPIC -o .libs/libstaden_read_la-seqIOALF.o
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-ztr_translate.lo `test -f 'ztr_translate.c' || echo './'`ztr_translate.c
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c ztr_translate.c -fPIC -DPIC -o .libs/libstaden_read_la-ztr_translate.o
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
ztr_translate.c:335:14: warning: 'ztr_encode_confidence_1' defined but not used [-Wunused-function]
335 | static char *ztr_encode_confidence_1(ztr_t *z,
| ^~~~~~~~~~~~~~~~~~~~~~~
ztr_translate.c:182:14: warning: 'ztr_encode_samples_T' defined but not used [-Wunused-function]
182 | static char *ztr_encode_samples_T(ztr_t *z,
| ^~~~~~~~~~~~~~~~~~~~
ztr_translate.c:175:14: warning: 'ztr_encode_samples_G' defined but not used [-Wunused-function]
175 | static char *ztr_encode_samples_G(ztr_t *z,
| ^~~~~~~~~~~~~~~~~~~~
ztr_translate.c:168:14: warning: 'ztr_encode_samples_C' defined but not used [-Wunused-function]
168 | static char *ztr_encode_samples_C(ztr_t *z,
| ^~~~~~~~~~~~~~~~~~~~
ztr_translate.c:161:14: warning: 'ztr_encode_samples_A' defined but not used [-Wunused-function]
161 | static char *ztr_encode_samples_A(ztr_t *z,
| ^~~~~~~~~~~~~~~~~~~~
ztr_translate.c: In function 'ztr_encode_samples_4':
ztr_translate.c:29:20: warning: '%s' directive writing up to 255 bytes into a region of size 12 [-Wformat-overflow=]
29 | *mdbytes = sprintf(*mdata, "OFFS%c%s", 0, buf) + 1;
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:906,
from ztr_translate.c:5:
In function '*__sprintfieee128',
inlined from 'ztr_encode_samples_4' at ztr_translate.c:29:13:
/usr/include/bits/stdio2.h:30:10: note: '*__sprintf_chkieee128' output between 6 and 261 bytes into a destination of size 17
30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
31 | __glibc_objsize (__s), __fmt,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
32 | __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-seqIOCTF.lo `test -f 'seqIOCTF.c' || echo './'`seqIOCTF.c
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c seqIOCTF.c -fPIC -DPIC -o .libs/libstaden_read_la-seqIOCTF.o
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-seqIOABI.lo `test -f 'seqIOABI.c' || echo './'`seqIOABI.c
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c seqIOABI.c -fPIC -DPIC -o .libs/libstaden_read_la-seqIOABI.o
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
seqIOABI.c: In function 'getABIString':
seqIOABI.c:259:9: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
259 | if (off = getABIIndexEntryLW(fp, indexO, label, count, 4, &len)) {
| ^~~
seqIOABI.c: In function 'mfread_abi':
seqIOABI.c:657:21: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
657 | if (p = strchr(commstrp, '\n'))
| ^
seqIOABI.c:662:21: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
662 | } while(commstrp = p);
| ^~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-compression.lo `test -f 'compression.c' || echo './'`compression.c
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c compression.c -fPIC -DPIC -o .libs/libstaden_read_la-compression.o
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-seqIOPlain.lo `test -f 'seqIOPlain.c' || echo './'`seqIOPlain.c
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c seqIOPlain.c -fPIC -DPIC -o .libs/libstaden_read_la-seqIOPlain.o
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
seqIOPlain.c: In function 'mfread_pln':
seqIOPlain.c:150:25: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
150 | if (p = strchr(type, ' '))
| ^
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-deflate_interlaced.lo `test -f 'deflate_interlaced.c' || echo './'`deflate_interlaced.c
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c deflate_interlaced.c -fPIC -DPIC -o .libs/libstaden_read_la-deflate_interlaced.o
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
deflate_interlaced.c: In function 'calc_bit_lengths':
deflate_interlaced.c:516:9: warning: variable 'map' set but not used [-Wunused-but-set-variable]
516 | int map[258];
| ^~~
deflate_interlaced.c: In function 'huffman_multi_decode':
deflate_interlaced.c:1760:9: warning: variable 'nc' set but not used [-Wunused-but-set-variable]
1760 | int nc;
| ^~
deflate_interlaced.c:1759:23: warning: variable 'c' set but not used [-Wunused-but-set-variable]
1759 | huffman_codes_t **c;
| ^
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-misc_scf.lo `test -f 'misc_scf.c' || echo './'`misc_scf.c
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c misc_scf.c -fPIC -DPIC -o .libs/libstaden_read_la-misc_scf.o
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
In file included from misc_scf.c:33:
misc_scf.c: In function 'is_scf':
../io_lib/scf.h:45:50: warning: suggest parentheses around '+' inside '<<' [-Wparentheses]
45 | #define SCF_MAGIC (((((uint_4)'.'<<8)+(uint_4)'s'<<8)+(uint_4)'c'<<8)+(uint_4)'f')
| ^~
misc_scf.c:151:26: note: in expansion of macro 'SCF_MAGIC'
151 | ok = (magic==SCF_MAGIC);
| ^~~~~~~~~
../io_lib/scf.h:45:66: warning: suggest parentheses around '+' inside '<<' [-Wparentheses]
45 | #define SCF_MAGIC (((((uint_4)'.'<<8)+(uint_4)'s'<<8)+(uint_4)'c'<<8)+(uint_4)'f')
| ^~
misc_scf.c:151:26: note: in expansion of macro 'SCF_MAGIC'
151 | ok = (magic==SCF_MAGIC);
| ^~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-sff.lo `test -f 'sff.c' || echo './'`sff.c
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c sff.c -fPIC -DPIC -o .libs/libstaden_read_la-sff.o
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-write_scf.lo `test -f 'write_scf.c' || echo './'`write_scf.c
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c write_scf.c -fPIC -DPIC -o .libs/libstaden_read_la-write_scf.o
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
In file included from write_scf.c:60:
write_scf.c: In function 'mfwrite_scf':
../io_lib/scf.h:45:50: warning: suggest parentheses around '+' inside '<<' [-Wparentheses]
45 | #define SCF_MAGIC (((((uint_4)'.'<<8)+(uint_4)'s'<<8)+(uint_4)'c'<<8)+(uint_4)'f')
| ^~
write_scf.c:389:32: note: in expansion of macro 'SCF_MAGIC'
389 | scf->header.magic_number = SCF_MAGIC;
| ^~~~~~~~~
../io_lib/scf.h:45:66: warning: suggest parentheses around '+' inside '<<' [-Wparentheses]
45 | #define SCF_MAGIC (((((uint_4)'.'<<8)+(uint_4)'s'<<8)+(uint_4)'c'<<8)+(uint_4)'f')
| ^~
write_scf.c:389:32: note: in expansion of macro 'SCF_MAGIC'
389 | scf->header.magic_number = SCF_MAGIC;
| ^~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-read_scf.lo `test -f 'read_scf.c' || echo './'`read_scf.c
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c read_scf.c -fPIC -DPIC -o .libs/libstaden_read_la-read_scf.o
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
In file included from ../io_lib/Read.h:44,
from read_scf.c:46:
read_scf.c: In function 'read_scf_header':
../io_lib/scf.h:45:50: warning: suggest parentheses around '+' inside '<<' [-Wparentheses]
45 | #define SCF_MAGIC (((((uint_4)'.'<<8)+(uint_4)'s'<<8)+(uint_4)'c'<<8)+(uint_4)'f')
| ^~
read_scf.c:67:28: note: in expansion of macro 'SCF_MAGIC'
67 | if (h->magic_number != SCF_MAGIC) return -1;
| ^~~~~~~~~
../io_lib/scf.h:45:66: warning: suggest parentheses around '+' inside '<<' [-Wparentheses]
45 | #define SCF_MAGIC (((((uint_4)'.'<<8)+(uint_4)'s'<<8)+(uint_4)'c'<<8)+(uint_4)'f')
| ^~
read_scf.c:67:28: note: in expansion of macro 'SCF_MAGIC'
67 | if (h->magic_number != SCF_MAGIC) return -1;
| ^~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-expFileIO.lo `test -f 'expFileIO.c' || echo './'`expFileIO.c
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c expFileIO.c -fPIC -DPIC -o .libs/libstaden_read_la-expFileIO.o
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
expFileIO.c: In function 'exp_print_mline':
expFileIO.c:198:9: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
198 | if (c = strchr(p, '\n'))
| ^
expFileIO.c:207:13: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
207 | if (c = strchr(p, '\n')) {
| ^
expFileIO.c: In function 'opos2str':
expFileIO.c:393:12: warning: suggest explicit braces to avoid ambiguous 'else' [-Wdangling-else]
393 | if (dir == 0)
| ^
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-array.lo `test -f 'array.c' || echo './'`array.c
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c array.c -fPIC -DPIC -o .libs/libstaden_read_la-array.o
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-error.lo `test -f 'error.c' || echo './'`error.c
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c error.c -fPIC -DPIC -o .libs/libstaden_read_la-error.o
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-files.lo `test -f 'files.c' || echo './'`files.c
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c files.c -fPIC -DPIC -o .libs/libstaden_read_la-files.o
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-compress.lo `test -f 'compress.c' || echo './'`compress.c
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c compress.c -fPIC -DPIC -o .libs/libstaden_read_la-compress.o
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-find.lo `test -f 'find.c' || echo './'`find.c
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c find.c -fPIC -DPIC -o .libs/libstaden_read_la-find.o
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-ctfCompress.lo `test -f 'ctfCompress.c' || echo './'`ctfCompress.c
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c ctfCompress.c -fPIC -DPIC -o .libs/libstaden_read_la-ctfCompress.o
ctfCompress.c: In function 'ctfCompress2':
ctfCompress.c:270:80: warning: format '%d' expects argument of type 'int', but argument 7 has type 'size_t' {aka 'long unsigned int'} [-Wformat=]
270 | printf ("compress2 : %d zeros in %d bytes, %d < 7 , %d byte, %d short total %d char for %d shrt\n",
| ~^
| |
| int
| %ld
ctfCompress.c:270:92: warning: format '%d' expects argument of type 'int', but argument 8 has type 'size_t' {aka 'long unsigned int'} [-Wformat=]
270 | printf ("compress2 : %d zeros in %d bytes, %d < 7 , %d byte, %d short total %d char for %d shrt\n",
| ~^
| |
| int
| %ld
ctfCompress.c: In function 'ctfCompress3':
ctfCompress.c:607:116: warning: format '%d' expects argument of type 'int', but argument 8 has type 'size_t' {aka 'long unsigned int'} [-Wformat=]
607 | printf (" // compress3:\n// %d zeros in %d bytes, %d values coded in %d byte, %d bytes, %d short. \n// Total %d char for %d shrt\n",
| ~^
| |
| int
| %ld
ctfCompress.c:607:128: warning: format '%d' expects argument of type 'int', but argument 9 has type 'size_t' {aka 'long unsigned int'} [-Wformat=]
607 | printf (" // compress3:\n// %d zeros in %d bytes, %d values coded in %d byte, %d bytes, %d short. \n// Total %d char for %d shrt\n",
| ~^
| |
| int
| %ld
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-mach-io.lo `test -f 'mach-io.c' || echo './'`mach-io.c
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c mach-io.c -fPIC -DPIC -o .libs/libstaden_read_la-mach-io.o
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-read_alloc.lo `test -f 'read_alloc.c' || echo './'`read_alloc.c
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c read_alloc.c -fPIC -DPIC -o .libs/libstaden_read_la-read_alloc.o
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-strings.lo `test -f 'strings.c' || echo './'`strings.c
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c strings.c -fPIC -DPIC -o .libs/libstaden_read_la-strings.o
strings.c: In function 'c2fstr':
strings.c:49:5: warning: 'strncpy' specified bound depends on the length of the source argument [-Wstringop-truncation]
49 | strncpy(f,c,i);
| ^
In file included from strings.c:19:
strings.c:48:18: note: length computed here
48 | i = min((int)strlen(c),max_f);
| ^~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-xalloc.lo `test -f 'xalloc.c' || echo './'`xalloc.c
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c xalloc.c -fPIC -DPIC -o .libs/libstaden_read_la-xalloc.o
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-srf.lo `test -f 'srf.c' || echo './'`srf.c
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c srf.c -fPIC -DPIC -o .libs/libstaden_read_la-srf.o
srf.c: In function 'srf_write_cont_hdr':
srf.c:300:24: warning: the comparison will always evaluate as 'true' for the address of 'version' will never be NULL [-Waddress]
300 | + (ch->version ? strlen(ch->version) : 0) + 1
| ^
In file included from srf.c:13:
../io_lib/srf.h:25:10: note: 'version' declared here
25 | char version[256];
| ^~~~~~~
srf.c:301:28: warning: the comparison will always evaluate as 'true' for the address of 'base_caller' will never be NULL [-Waddress]
301 | + (ch->base_caller ? strlen(ch->base_caller) : 0) + 1
| ^
../io_lib/srf.h:27:10: note: 'base_caller' declared here
27 | char base_caller[256];
| ^~~~~~~~~~~
srf.c:302:36: warning: the comparison will always evaluate as 'true' for the address of 'base_caller_version' will never be NULL [-Waddress]
302 | + (ch->base_caller_version ? strlen(ch->base_caller_version) : 0) + 1;
| ^
../io_lib/srf.h:28:10: note: 'base_caller_version' declared here
28 | char base_caller_version[256];
| ^~~~~~~~~~~~~~~~~~~
srf.c: In function 'srf_write_trace_hdr':
srf.c:466:26: warning: the comparison will always evaluate as 'true' for the address of 'id_prefix' will never be NULL [-Waddress]
466 | + (th->id_prefix ? strlen(th->id_prefix) : 0) + 1
| ^
../io_lib/srf.h:35:10: note: 'id_prefix' declared here
35 | char id_prefix[256];
| ^~~~~~~~~
srf.c: In function 'srf_index_write':
srf.c:976:27: warning: the comparison will always evaluate as 'true' for the address of 'ch_file' will never be NULL [-Waddress]
976 | 1 + (idx->ch_file ? strlen(idx->ch_file) : 0) +
| ^
../io_lib/srf.h:85:10: note: 'ch_file' declared here
85 | char ch_file[PATH_MAX+1];
| ^~~~~~~
srf.c:977:27: warning: the comparison will always evaluate as 'true' for the address of 'th_file' will never be NULL [-Waddress]
977 | 1 + (idx->th_file ? strlen(idx->th_file) : 0);
| ^
../io_lib/srf.h:86:10: note: 'th_file' declared here
86 | char th_file[PATH_MAX+1];
| ^~~~~~~
srf.c:1002:9: warning: the comparison will always evaluate as 'true' for the address of 'th_file' will never be NULL [-Waddress]
1002 | if (idx->th_file)
| ^~~
../io_lib/srf.h:86:10: note: 'th_file' declared here
86 | char th_file[PATH_MAX+1];
| ^~~~~~~
srf.c:1006:9: warning: the comparison will always evaluate as 'true' for the address of 'ch_file' will never be NULL [-Waddress]
1006 | if (idx->ch_file)
| ^~~
../io_lib/srf.h:85:10: note: 'ch_file' declared here
85 | char ch_file[PATH_MAX+1];
| ^~~~~~~
srf.c: In function 'get_hi_bits':
srf.c:1106:59: warning: suggest parentheses around '-' in operand of '&' [-Wparentheses]
1106 | val = (block->data[block->byte]) & (1<<(8-block->bit))-1;
| ~~~~~~~~~~~~~~~~~~~^~
srf.c:1126:28: warning: suggest parentheses around '-' in operand of '&' [-Wparentheses]
1126 | & (1<<(nbits-bnum))-1;
| ~~~~~~~~~~~~~~~~~^~
srf.c: In function 'pack_trace_suffix':
srf.c:1383:17: warning: variable 'width' set but not used [-Wunused-but-set-variable]
1383 | int width = 0;
| ^~~~~
srf.c: In function 'partial_decode_ztr':
srf.c:1604:12: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
1604 | while (chunk = ztr_read_chunk_hdr(mf)) {
| ^~~~~
srf.c: In function 'srf_find_trace':
srf.c:2025:13: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
2025 | fread(dpos, 1, item_sz, srf->fp);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-vlen.lo `test -f 'vlen.c' || echo './'`vlen.c
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c vlen.c -fPIC -DPIC -o .libs/libstaden_read_la-vlen.o
vlen.c: In function 'vflen':
vlen.c:86:19: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
86 | for(; c=*++cp;) {
| ^
vlen.c:57:9: warning: variable 'i' set but not used [-Wunused-but-set-variable]
57 | int i;
| ^
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-traceType.lo `test -f 'traceType.c' || echo './'`traceType.c
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c traceType.c -fPIC -DPIC -o .libs/libstaden_read_la-traceType.o
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-open_trace_file.lo `test -f 'open_trace_file.c' || echo './'`open_trace_file.c
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c open_trace_file.c -fPIC -DPIC -o .libs/libstaden_read_la-open_trace_file.o
open_trace_file.c: In function 'find_file_tar':
open_trace_file.c:143:21: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
143 | if (cp = strchr(path, '\n'))
| ^~
open_trace_file.c: In function 'sff_hash_query':
open_trace_file.c:537:21: warning: assignment to 'FILE **' from incompatible pointer type 'FILE *' [-Wincompatible-pointer-types]
537 | hf->afp = hf->hfp = NULL; /* will be closed by our parent */
| ^
open_trace_file.c:530:18: warning: variable 'fp_copy' set but not used [-Wunused-but-set-variable]
530 | static FILE *fp_copy = NULL;
| ^~~~~~~
open_trace_file.c: In function 'find_file_sff':
open_trace_file.c:748:14: warning: variable 'nkey' set but not used [-Wunused-but-set-variable]
748 | uint32_t nkey, nflows, chdrlen, rhdrlen, dlen, magic;
| ^~~~
open_trace_file.c: In function 'find_file_dir':
open_trace_file.c:914:9: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
914 | if (cp = strrchr(file, '/')) {
| ^~
open_trace_file.c: In function 'open_path_mfile':
open_trace_file.c:1087:13: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
1087 | if (cp = strrchr(relative_path, '/'))
| ^~
open_trace_file.c:1089:13: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
1089 | if (fp = find_file_dir(file, relative_path))
| ^~
open_trace_file.c: In function 'find_file_sff':
open_trace_file.c:798:9: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
798 | fread(index_format, 1, 8, fp);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
open_trace_file.c: In function 'find_file_dir':
open_trace_file.c:929:13: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
929 | fread(magic, 1, 4, fp);
| ^~~~~~~~~~~~~~~~~~~~~~
open_trace_file.c:940:17: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
940 | fread(magic, 1, 8, fp);
| ^~~~~~~~~~~~~~~~~~~~~~
open_trace_file.c:950:17: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
950 | fread(magic, 1, 5, fp);
| ^~~~~~~~~~~~~~~~~~~~~~
open_trace_file.c: In function 'sff_sorted_query':
open_trace_file.c:704:5: warning: 'offset' may be used uninitialized [-Wmaybe-uninitialized]
704 | fseek(fp, offset, SEEK_SET);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
open_trace_file.c:595:14: note: 'offset' was declared here
595 | uint32_t offset;
| ^~~~~~
In file included from open_trace_file.c:33:
In function 'find_file_url',
inlined from 'open_path_mfile' at open_trace_file.c:1054:22:
open_trace_file.c:458:14: warning: call to '_curl_easy_setopt_err_write_callback' declared with attribute warning: curl_easy_setopt expects a curl_write_callback argument for this option [-Wattribute-warning]
458 | if (0 != curl_easy_setopt(handle, CURLOPT_WRITEFUNCTION, mfwrite))
| ^~~~~~~~~~~~~~~~
open_trace_file.c:462:14: warning: call to '_curl_easy_setopt_err_write_callback' declared with attribute warning: curl_easy_setopt expects a curl_write_callback argument for this option [-Wattribute-warning]
462 | if (0 != curl_easy_setopt(handle, CURLOPT_HEADERFUNCTION, mfwrite))
| ^~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-pooled_alloc.lo `test -f 'pooled_alloc.c' || echo './'`pooled_alloc.c
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c pooled_alloc.c -fPIC -DPIC -o .libs/libstaden_read_la-pooled_alloc.o
pooled_alloc.c: In function 'new_pool':
pooled_alloc.c:37:11: warning: unused variable 'cp' [-Wunused-variable]
37 | char *cp;
| ^~
pooled_alloc.c:35:12: warning: unused variable 'i' [-Wunused-variable]
35 | size_t i, n = PSIZE / p->dsize;
| ^
pooled_alloc.c: In function 'pool_alloc':
pooled_alloc.c:65:12: warning: unused variable 'i' [-Wunused-variable]
65 | size_t i;
| ^
pooled_alloc.c: In function 'pool_free':
pooled_alloc.c:95:19: warning: unused variable 'i' [-Wunused-variable]
95 | size_t psize, i;
| ^
pooled_alloc.c:95:12: warning: unused variable 'psize' [-Wunused-variable]
95 | size_t psize, i;
| ^~~~~
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-jenkins_lookup3.lo `test -f 'jenkins_lookup3.c' || echo './'`jenkins_lookup3.c
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c jenkins_lookup3.c -fPIC -DPIC -o .libs/libstaden_read_la-jenkins_lookup3.o
jenkins_lookup3.c:654:17: warning: 'hashbig' defined but not used [-Wunused-function]
654 | static uint32_t hashbig( const void *key, size_t length, uint32_t initval)
| ^~~~~~~
jenkins_lookup3.c:288:17: warning: 'hashlittle' defined but not used [-Wunused-function]
288 | static uint32_t hashlittle( const void *key, size_t length, uint32_t initval)
| ^~~~~~~~~~
jenkins_lookup3.c:223:13: warning: 'hashword2' defined but not used [-Wunused-function]
223 | static void hashword2 (
| ^~~~~~~~~
jenkins_lookup3.c:179:17: warning: 'hashword' defined but not used [-Wunused-function]
179 | static uint32_t hashword(
| ^~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-mFILE.lo `test -f 'mFILE.c' || echo './'`mFILE.c
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c mFILE.c -fPIC -DPIC -o .libs/libstaden_read_la-mFILE.o
mFILE.c: In function 'mfreopen':
mFILE.c:194:16: warning: variable 'w' set but not used [-Wunused-but-set-variable]
194 | int r = 0, w = 0, a = 0, b = 0, x = 0, mode = 0;
| ^
mFILE.c: In function 'mfflush':
mFILE.c:487:17: warning: suggest parentheses around operand of '!' or change '&' to '&&' or '!' to '~' [-Wparentheses]
487 | if (!mf->mode & MF_MODEX)
| ^~~~~~~~~
mFILE.c:493:9: warning: ignoring return value of 'ftruncate' declared with attribute 'warn_unused_result' [-Wunused-result]
493 | ftruncate(fileno(mf->fp), ftell(mf->fp));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-hash_table.lo `test -f 'hash_table.c' || echo './'`hash_table.c
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c hash_table.c -fPIC -DPIC -o .libs/libstaden_read_la-hash_table.o
hash_table.c: In function 'HashFileFopen':
hash_table.c:1140:13: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
1140 | fread(hf->archives[i], 1, fnamelen, fp);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
hash_table.c:1156:9: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
1156 | fread(&hf->headers[i].pos, 8, 1, hf->hfp);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
hash_table.c:1157:9: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
1157 | fread(&hf->headers[i].size, 4, 1, hf->hfp);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
hash_table.c:1169:9: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
1169 | fread(&hf->footers[i].pos, 8, 1, hf->hfp);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
hash_table.c:1170:9: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
1170 | fread(&hf->footers[i].size, 4, 1, hf->hfp);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
hash_table.c: In function 'HashFileQuery':
hash_table.c:1368:9: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
1368 | fread(k, klen, 1, hf->hfp);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~
hash_table.c:1369:9: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
1369 | fread(&headfoot, 1, 1, hf->hfp);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
hash_table.c:1372:9: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
1372 | fread(&pos, 8, 1, hf->hfp);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~
hash_table.c:1376:9: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
1376 | fread(&size, 4, 1, hf->hfp);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
hash_table.c: In function 'HashFileExtract':
hash_table.c:1506:9: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
1506 | fread(&data[pos], head->size, 1, hf->afp[head->archive_no]);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
hash_table.c:1516:5: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
1516 | fread(&data[pos], hfi.size, 1, hf->afp[hfi.archive]);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
hash_table.c:1526:9: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
1526 | fread(&data[pos], foot->size, 1, hf->afp[foot->archive_no]);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
/bin/sh ../libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o libstaden-read.la -rpath /usr/lib64 -version-info 2:2:1 libstaden_read_la-Read.lo libstaden_read_la-scf_extras.lo libstaden_read_la-translate.lo libstaden_read_la-compression.lo libstaden_read_la-ztr.lo libstaden_read_la-ztr_translate.lo libstaden_read_la-deflate_interlaced.lo libstaden_read_la-fpoint.lo libstaden_read_la-seqIOABI.lo libstaden_read_la-seqIOALF.lo libstaden_read_la-ctfCompress.lo libstaden_read_la-seqIOCTF.lo libstaden_read_la-expFileIO.lo libstaden_read_la-seqIOPlain.lo libstaden_read_la-misc_scf.lo libstaden_read_la-read_scf.lo libstaden_read_la-write_scf.lo libstaden_read_la-sff.lo libstaden_read_la-srf.lo libstaden_read_la-array.lo libstaden_read_la-compress.lo libstaden_read_la-error.lo libstaden_read_la-files.lo libstaden_read_la-find.lo libstaden_read_la-mach-io.lo libstaden_read_la-open_trace_file.lo libstaden_read_la-read_alloc.lo libstaden_read_la-strings.lo libstaden_read_la-traceType.lo libstaden_read_la-xalloc.lo libstaden_read_la-vlen.lo libstaden_read_la-hash_table.lo libstaden_read_la-jenkins_lookup3.lo libstaden_read_la-mFILE.lo libstaden_read_la-pooled_alloc.lo -lz -lcurl -lm
gcc -shared .libs/libstaden_read_la-Read.o .libs/libstaden_read_la-scf_extras.o .libs/libstaden_read_la-translate.o .libs/libstaden_read_la-compression.o .libs/libstaden_read_la-ztr.o .libs/libstaden_read_la-ztr_translate.o .libs/libstaden_read_la-deflate_interlaced.o .libs/libstaden_read_la-fpoint.o .libs/libstaden_read_la-seqIOABI.o .libs/libstaden_read_la-seqIOALF.o .libs/libstaden_read_la-ctfCompress.o .libs/libstaden_read_la-seqIOCTF.o .libs/libstaden_read_la-expFileIO.o .libs/libstaden_read_la-seqIOPlain.o .libs/libstaden_read_la-misc_scf.o .libs/libstaden_read_la-read_scf.o .libs/libstaden_read_la-write_scf.o .libs/libstaden_read_la-sff.o .libs/libstaden_read_la-srf.o .libs/libstaden_read_la-array.o .libs/libstaden_read_la-compress.o .libs/libstaden_read_la-error.o .libs/libstaden_read_la-files.o .libs/libstaden_read_la-find.o .libs/libstaden_read_la-mach-io.o .libs/libstaden_read_la-open_trace_file.o .libs/libstaden_read_la-read_alloc.o .libs/libstaden_read_la-strings.o .libs/libstaden_read_la-traceType.o .libs/libstaden_read_la-xalloc.o .libs/libstaden_read_la-vlen.o .libs/libstaden_read_la-hash_table.o .libs/libstaden_read_la-jenkins_lookup3.o .libs/libstaden_read_la-mFILE.o .libs/libstaden_read_la-pooled_alloc.o -lz -lcurl -lm -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -m64 -mcpu=power8 -mtune=power8 -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,now -Wl,--build-id=sha1 -Wl,-soname -Wl,libstaden-read.so.1 -o .libs/libstaden-read.so.1.1.2
(cd .libs && rm -f libstaden-read.so.1 && ln -s libstaden-read.so.1.1.2 libstaden-read.so.1)
(cd .libs && rm -f libstaden-read.so && ln -s libstaden-read.so.1.1.2 libstaden-read.so)
creating libstaden-read.la
(cd .libs && rm -f libstaden-read.la && ln -s ../libstaden-read.la libstaden-read.la)
In function 'find_file_url',
inlined from 'open_path_mfile' at open_trace_file.c:1054:22:
open_trace_file.c:458:14: warning: call to '_curl_easy_setopt_err_write_callback' declared with attribute warning: curl_easy_setopt expects a curl_write_callback argument for this option [-Wattribute-warning]
458 | if (0 != curl_easy_setopt(handle, CURLOPT_WRITEFUNCTION, mfwrite))
| ^
open_trace_file.c:462:14: warning: call to '_curl_easy_setopt_err_write_callback' declared with attribute warning: curl_easy_setopt expects a curl_write_callback argument for this option [-Wattribute-warning]
462 | if (0 != curl_easy_setopt(handle, CURLOPT_HEADERFUNCTION, mfwrite))
| ^
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
Making all in progs
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c extract_fastq.c
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
extract_fastq.c: In function 'main':
extract_fastq.c:141:25: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
141 | if (cp = strchr(line, '\n'))
| ^~
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c extract_seq.c
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
extract_seq.c: In function 'main':
extract_seq.c:199:25: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
199 | if (cp = strchr(line, '\n'))
| ^~
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c extract_qual.c
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
extract_qual.c: In function 'main':
extract_qual.c:317:25: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
317 | if (cp = strchr(line, '\n'))
| ^~
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c index_tar.c
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
index_tar.c: In function 'main':
index_tar.c:72:21: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
72 | fread(member, 1, size > 256 ? 256 : size, fp);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
index_tar.c:82:17: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
82 | fread(member, 1, size > 256 ? 256 : size, fp);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c scf_dump.c
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c scf_info.c
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c scf_update.c
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c makeSCF.c
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c get_comment.c
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c hash_list.c
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c hash_extract.c
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
hash_extract.c: In function 'extract':
hash_extract.c:20:9: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
20 | if (data = HashFileExtract(hf, file, &len)) {
| ^~~~
hash_extract.c: In function 'main':
hash_extract.c:74:17: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
74 | if (c = strchr(file, '\n'))
| ^
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c append_sff.c
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
append_sff.c: In function 'main':
append_sff.c:116:5: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
116 | fread(chdr, 1, 31, fpout);
| ^~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c convert_trace.c
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
convert_trace.c:16:19: warning: 'rcsid' defined but not used [-Wunused-const-variable=]
16 | static char const rcsid[] = "$Id: convert_trace.c,v 1.12 2008-02-20 16:07:44 jkbonfield Exp $";
| ^~~~~
convert_trace.c: In function 'main':
convert_trace.c:743:37: warning: '%s' directive writing up to 8191 bytes into a region of size 2042 [-Wformat-overflow=]
724 | infname = line2;
| ~~~~~
......
743 | sprintf(buf, "ERROR %s", infname);
| ^~
In file included from /usr/include/stdio.h:906,
from convert_trace.c:5:
In function '*__sprintfieee128',
inlined from 'main' at convert_trace.c:743:3:
/usr/include/bits/stdio2.h:30:10: note: '*__sprintf_chkieee128' output between 7 and 8198 bytes into a destination of size 2048
30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
31 | __glibc_objsize (__s), __fmt,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
32 | __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c trace_dump.c
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c hash_tar.c
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
hash_tar.c: In function 'load_map':
hash_tar.c:78:5: warning: implicit declaration of function 'close'; did you mean 'pclose'? [-Wimplicit-function-declaration]
78 | close(fp);
| ^~~~~
| pclose
hash_tar.c: In function 'main':
hash_tar.c:273:11: warning: unused variable 'fp' [-Wunused-variable]
273 | FILE *fp;
| ^~
hash_tar.c: In function 'accumulate':
hash_tar.c:136:21: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
136 | fread(member, 1, size > 256 ? 256 : size, fp);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
hash_tar.c:146:17: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
146 | fread(member, 1, size > 256 ? 256 : size, fp);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
hash_tar.c:204:1: warning: control reaches end of non-void function [-Wreturn-type]
204 | }
| ^
hash_tar.c: In function 'main':
hash_tar.c:327:27: warning: 'hf' may be used uninitialized [-Wmaybe-uninitialized]
327 | realloc(hf->headers, (hf->nheaders+1) *
| ~~^~~~~~~~~
hash_tar.c:274:15: note: 'hf' was declared here
274 | HashFile *hf;
| ^~
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c hash_sff.c
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
hash_sff.c: In function 'main':
hash_sff.c:207:20: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
207 | while (len = fread(block, 1, 8192, fp)) {
| ^~~
hash_sff.c:230:13: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
230 | fread(hdr, 1, 31, fp);
| ^~~~~~~~~~~~~~~~~~~~~
hash_sff.c:258:13: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
258 | fread(hdr, 1, 31, fpout);
| ^~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c srf_index_hash.c
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
srf_index_hash.c: In function 'main':
srf_index_hash.c:138:5: warning: ignoring return value of 'ftruncate' declared with attribute 'warn_unused_result' [-Wunused-result]
138 | ftruncate(fileno(srf->fp), ftello(srf->fp));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c srf_extract_linear.c
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c ztr_dump.c
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c srf_extract_hash.c
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c srf2fasta.c
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c srf_list.c
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
srf_list.c: In function 'count_file':
srf_list.c:75:19: warning: unused variable 'data' [-Wunused-variable]
75 | unsigned char data[16];
| ^~~~
srf_list.c:74:22: warning: unused variable 'i' [-Wunused-variable]
74 | int item_sz = 9, i;
| ^
srf_list.c:73:11: warning: variable 'ipos' set but not used [-Wunused-but-set-variable]
73 | off_t ipos, skip;
| ^~~~
srf_list.c:72:13: warning: unused variable 'count' [-Wunused-variable]
72 | int64_t count = 0;
| ^~~~~
srf_list.c: In function 'main':
srf_list.c:158:26: warning: format '%d' expects argument of type 'int', but argument 3 has type 'int64_t' {aka 'long int'} [-Wformat=]
158 | printf("%s: %d sequences\n", argv[i], c);
| ~^ ~
| | |
| int int64_t {aka long int}
| %ld
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c srf2fastq.c
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
srf2fastq.c: In function 'ztr2fastq':
srf2fastq.c:369:17: warning: variable 'start' set but not used [-Wunused-but-set-variable]
369 | int start, length;
| ^~~~~
srf2fastq.c:480:21: warning: variable 'start' set but not used [-Wunused-but-set-variable]
480 | int start, length;
| ^~~~~
srf2fastq.c:462:41: warning: 'regn' may be used uninitialized [-Wmaybe-uninitialized]
462 | for (iregion=0; iregion<regn->nregions; iregion++) {
| ~~~~^~~~~~~~~~
srf2fastq.c:248:13: note: 'regn' was declared here
248 | regn_t *regn;
| ^~~~
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c srf_info.c
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
srf_info.c: In function 'partial_decode_ztr2':
srf_info.c:411:12: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
411 | while (chunk = ztr_read_chunk_hdr(mf)) {
| ^~~~~
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c srf_dump_all.c
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
srf_dump_all.c: In function 'dump_solexa':
srf_dump_all.c:309:57: warning: pointer targets in passing argument 3 of 'dump_conf4_solexa' differ in signedness [-Wpointer-sign]
309 | dump_conf4_solexa(files[1], seq, chunks[0]->data+1, chunks[0]->dlength-1);
| ~~~~~~~~~~~~~~~^~
| |
| char *
srf_dump_all.c:227:58: note: expected 'signed char *' but argument is of type 'char *'
227 | void dump_conf4_solexa(FILE *fp, char *seq, signed char *bytes, int nbytes) {
| ~~~~~~~~~~~~~^~~~~
srf_dump_all.c:320:53: warning: pointer targets in passing argument 7 of 'dump_samples4_solexa' differ in signedness [-Wpointer-sign]
320 | chunks[i]->data+2, chunks[i]->dlength-2);
| ~~~~~~~~~~~~~~~^~
| |
| char *
srf_dump_all.c:195:56: note: expected 'unsigned char *' but argument is of type 'char *'
195 | int baseline, unsigned char *bytes, int nbytes) {
| ~~~~~~~~~~~~~~~^~~~~
srf_dump_all.c:333:53: warning: pointer targets in passing argument 7 of 'dump_samples4_solexa' differ in signedness [-Wpointer-sign]
333 | chunks[i]->data+2, chunks[i]->dlength-2);
| ~~~~~~~~~~~~~~~^~
| |
| char *
srf_dump_all.c:195:56: note: expected 'unsigned char *' but argument is of type 'char *'
195 | int baseline, unsigned char *bytes, int nbytes) {
| ~~~~~~~~~~~~~~~^~~~~
srf_dump_all.c:346:53: warning: pointer targets in passing argument 7 of 'dump_samples4_solexa' differ in signedness [-Wpointer-sign]
346 | chunks[i]->data+2, chunks[i]->dlength-2);
| ~~~~~~~~~~~~~~~^~
| |
| char *
srf_dump_all.c:195:56: note: expected 'unsigned char *' but argument is of type 'char *'
195 | int baseline, unsigned char *bytes, int nbytes) {
| ~~~~~~~~~~~~~~~^~~~~
srf_dump_all.c: In function 'read_filter_from_file':
srf_dump_all.c:484:11: warning: variable 'lStartPos' set but not used [-Wunused-but-set-variable]
484 | long lStartPos; /* Offset of start of current line */
| ^~~~~~~~~
srf_dump_all.c:483:11: warning: variable 'lLineLen' set but not used [-Wunused-but-set-variable]
483 | long lLineLen; /* Current line length */
| ^~~~~~~~
srf_dump_all.c:506:5: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
506 | fread(cFile, lFileLen, 1, input); /* Read the entire file into cFile */
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
srf_dump_all.c:566:49: warning: '%s' directive argument is null [-Wformat-overflow=]
566 | fprintf(stderr, "Bad read \"%s\" in read filter \"%s\".\n", read, cThisLine);
| ^~
srf_dump_all.c:555:51: warning: '%s' directive argument is null [-Wformat-overflow=]
555 | fprintf(stderr, "Bad prefix \"%s\" in read filter \"%s\".\n", prefix, cThisLine);
| ^~
srf_dump_all.c: In function 'get_read_filter':
srf_dump_all.c:651:41: warning: '%s' directive argument is null [-Wformat-overflow=]
651 | fprintf(stderr, "Bad read \"%s\" in read filter \"%s\".\n", read, filter_value);
| ^~
srf_dump_all.c:640:43: warning: '%s' directive argument is null [-Wformat-overflow=]
640 | fprintf(stderr, "Bad prefix \"%s\" in read filter \"%s\".\n", prefix, filter_value);
| ^~
srf_dump_all.c:622:46: warning: '%s' directive argument is null [-Wformat-overflow=]
622 | fprintf(stderr, "Bad file name \"%s\" in read filter \"%s\".\n", file_name, filter_value);
| ^~
srf_dump_all.c: In function 'process_srf_to_text_files':
srf_dump_all.c:940:20: warning: '/s_' directive writing 3 bytes into a region of size between 1 and 1024 [-Wformat-overflow=]
940 | sprintf(fn, "%s/s_%d_%04d_dump.txt", dir, lane, tile);
| ^~~
In file included from /usr/include/stdio.h:906,
from srf_dump_all.c:37:
In function '*__sprintfieee128',
inlined from 'fopen_text' at srf_dump_all.c:940:5,
inlined from 'process_srf_to_text_files' at srf_dump_all.c:988:14:
/usr/include/bits/stdio2.h:30:10: note: '*__sprintf_chkieee128' output between 19 and 1059 bytes into a destination of size 1024
30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
31 | __glibc_objsize (__s), __fmt,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
32 | __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
/bin/sh ../libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o convert_trace convert_trace.o ../io_lib/libstaden-read.la -lm
mkdir .libs
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o .libs/convert_trace convert_trace.o ../io_lib/.libs/libstaden-read.so -lm
creating convert_trace
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
/bin/sh ../libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o makeSCF makeSCF.o ../io_lib/libstaden-read.la -lm
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o .libs/makeSCF makeSCF.o ../io_lib/.libs/libstaden-read.so -lm
creating makeSCF
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
/bin/sh ../libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o extract_qual extract_qual.o ../io_lib/libstaden-read.la -lm
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o .libs/extract_qual extract_qual.o ../io_lib/.libs/libstaden-read.so -lm
creating extract_qual
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c srf_filter.c
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
srf_filter.c: In function 'read_filter_from_file':
srf_filter.c:164:11: warning: variable 'lStartPos' set but not used [-Wunused-but-set-variable]
164 | long lStartPos; /* Offset of start of current line */
| ^~~~~~~~~
srf_filter.c:163:11: warning: variable 'lLineLen' set but not used [-Wunused-but-set-variable]
163 | long lLineLen; /* Current line length */
| ^~~~~~~~
srf_filter.c: In function 'dump_read_filter':
srf_filter.c:457:33: warning: format '%d' expects argument of type 'int', but argument 2 has type 'uint64_t' {aka 'long unsigned int'} [-Wformat=]
457 | printf("\tread[%d] = %s\n", hi->data.i, hi->key);
| ~^ ~~~~~~~~~~
| | |
| int uint64_t {aka long unsigned int}
| %ld
srf_filter.c: In function 'add_readpair_region':
srf_filter.c:587:16: warning: pointer targets in assignment from 'unsigned char *' to 'char *' differ in signedness [-Wpointer-sign]
587 | c.data = data;
| ^
srf_filter.c: In function 'srf_filter':
srf_filter.c:699:24: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
699 | while (chunk = ztr_read_chunk_hdr(in_srf->mf)) {
| ^~~~~
srf_filter.c:788:23: warning: left-hand operand of comma expression has no effect [-Wunused-value]
788 | stderr, "Error making trace header.\nExiting.\n";
| ^
srf_filter.c:788:23: warning: statement with no effect [-Wunused-value]
srf_filter.c:794:73: warning: pointer targets in passing argument 3 of 'srf_construct_trace_hdr' differ in signedness [-Wpointer-sign]
794 | srf_construct_trace_hdr(&out_srf->th, in_srf->th.id_prefix, trace_hdr, trace_hdr_size);
| ^~~~~~~~~
| |
| char *
In file included from srf_filter.c:47:
../io_lib/srf.h:146:57: note: expected 'unsigned char *' but argument is of type 'char *'
146 | unsigned char *header,
| ~~~~~~~~~~~~~~~^~~~~~
srf_filter.c:894:24: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
894 | while (chunk = ztr_read_chunk_hdr(in_srf->mf)) {
| ^~~~~
srf_filter.c:980:92: warning: pointer targets in passing argument 4 of 'srf_construct_trace_body' differ in signedness [-Wpointer-sign]
980 | srf_construct_trace_body(&new_tb, name+strlen(in_srf->th.id_prefix), -1, mf->data, mf->size, old_tb.flags);
| ~~^~~~~~
| |
| char *
../io_lib/srf.h:155:59: note: expected 'unsigned char *' but argument is of type 'char *'
155 | unsigned char *body,
| ~~~~~~~~~~~~~~~^~~~
srf_filter.c: In function 'read_filter_from_file':
srf_filter.c:186:5: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
186 | fread(cFile, lFileLen, 1, input); /* Read the entire file into cFile */
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
srf_filter.c:246:49: warning: '%s' directive argument is null [-Wformat-overflow=]
246 | fprintf(stderr, "Bad read \"%s\" in read filter \"%s\".\n", read, cThisLine);
| ^~
srf_filter.c:235:51: warning: '%s' directive argument is null [-Wformat-overflow=]
235 | fprintf(stderr, "Bad prefix \"%s\" in read filter \"%s\".\n", prefix, cThisLine);
| ^~
srf_filter.c: In function 'get_read_filter':
srf_filter.c:348:41: warning: '%s' directive argument is null [-Wformat-overflow=]
348 | fprintf(stderr, "Bad read \"%s\" in read filter \"%s\".\n", read, filter_value);
| ^~
srf_filter.c:337:43: warning: '%s' directive argument is null [-Wformat-overflow=]
337 | fprintf(stderr, "Bad prefix \"%s\" in read filter \"%s\".\n", prefix, filter_value);
| ^~
srf_filter.c:319:46: warning: '%s' directive argument is null [-Wformat-overflow=]
319 | fprintf(stderr, "Bad file name \"%s\" in read filter \"%s\".\n", file_name, filter_value);
| ^~
srf_filter.c: In function 'srf_filter':
srf_filter.c:970:19: warning: 'output_trace_header' may be used uninitialized [-Wmaybe-uninitialized]
970 | if( output_trace_header ) {
| ^
srf_filter.c:613:9: note: 'output_trace_header' was declared here
613 | int output_trace_header;
| ^~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
/bin/sh ../libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o extract_seq extract_seq.o ../io_lib/libstaden-read.la -lm
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o .libs/extract_seq extract_seq.o ../io_lib/.libs/libstaden-read.so -lm
creating extract_seq
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
/bin/sh ../libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o extract_fastq extract_fastq.o ../io_lib/libstaden-read.la -lm
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o .libs/extract_fastq extract_fastq.o ../io_lib/.libs/libstaden-read.so -lm
creating extract_fastq
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
/bin/sh ../libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o index_tar index_tar.o -lm
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o index_tar index_tar.o -lm
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
/bin/sh ../libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o scf_update scf_update.o ../io_lib/libstaden-read.la -lm
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o .libs/scf_update scf_update.o ../io_lib/.libs/libstaden-read.so -lm
creating scf_update
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
/bin/sh ../libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o scf_info scf_info.o ../io_lib/libstaden-read.la -lm
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o .libs/scf_info scf_info.o ../io_lib/.libs/libstaden-read.so -lm
creating scf_info
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
/bin/sh ../libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o scf_dump scf_dump.o ../io_lib/libstaden-read.la -lm
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o .libs/scf_dump scf_dump.o ../io_lib/.libs/libstaden-read.so -lm
creating scf_dump
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
/bin/sh ../libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o get_comment get_comment.o ../io_lib/libstaden-read.la -lm
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o .libs/get_comment get_comment.o ../io_lib/.libs/libstaden-read.so -lm
creating get_comment
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
/bin/sh ../libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o hash_list hash_list.o ../io_lib/libstaden-read.la -lm
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o .libs/hash_list hash_list.o ../io_lib/.libs/libstaden-read.so -lm
creating hash_list
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
/bin/sh ../libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o hash_tar hash_tar.o ../io_lib/libstaden-read.la -lm
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o .libs/hash_tar hash_tar.o ../io_lib/.libs/libstaden-read.so -lm
creating hash_tar
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
/bin/sh ../libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o hash_extract hash_extract.o ../io_lib/libstaden-read.la -lm
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o .libs/hash_extract hash_extract.o ../io_lib/.libs/libstaden-read.so -lm
creating hash_extract
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
/bin/sh ../libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o trace_dump trace_dump.o ../io_lib/libstaden-read.la -lm
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o .libs/trace_dump trace_dump.o ../io_lib/.libs/libstaden-read.so -lm
creating trace_dump
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
/bin/sh ../libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o append_sff append_sff.o ../io_lib/libstaden-read.la -lm
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o .libs/append_sff append_sff.o ../io_lib/.libs/libstaden-read.so -lm
creating append_sff
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
/bin/sh ../libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o hash_sff hash_sff.o ../io_lib/libstaden-read.la -lm
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o .libs/hash_sff hash_sff.o ../io_lib/.libs/libstaden-read.so -lm
creating hash_sff
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
/bin/sh ../libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o ztr_dump ztr_dump.o ../io_lib/libstaden-read.la -lm
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o .libs/ztr_dump ztr_dump.o ../io_lib/.libs/libstaden-read.so -lm
creating ztr_dump
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
/bin/sh ../libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o srf_index_hash srf_index_hash.o ../io_lib/libstaden-read.la -lm
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o .libs/srf_index_hash srf_index_hash.o ../io_lib/.libs/libstaden-read.so -lm
creating srf_index_hash
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
/bin/sh ../libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o srf_extract_linear srf_extract_linear.o ../io_lib/libstaden-read.la -lm
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o .libs/srf_extract_linear srf_extract_linear.o ../io_lib/.libs/libstaden-read.so -lm
creating srf_extract_linear
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
/bin/sh ../libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o srf_extract_hash srf_extract_hash.o ../io_lib/libstaden-read.la -lm
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o .libs/srf_extract_hash srf_extract_hash.o ../io_lib/.libs/libstaden-read.so -lm
creating srf_extract_hash
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
/bin/sh ../libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o srf2fasta srf2fasta.o ../io_lib/libstaden-read.la -lm
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o .libs/srf2fasta srf2fasta.o ../io_lib/.libs/libstaden-read.so -lm
creating srf2fasta
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
/bin/sh ../libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o srf2fastq srf2fastq.o ../io_lib/libstaden-read.la -lm
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o .libs/srf2fastq srf2fastq.o ../io_lib/.libs/libstaden-read.so -lm
creating srf2fastq
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
/bin/sh ../libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o srf_dump_all srf_dump_all.o ../io_lib/libstaden-read.la -lm
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o .libs/srf_dump_all srf_dump_all.o ../io_lib/.libs/libstaden-read.so -lm
creating srf_dump_all
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
/bin/sh ../libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o srf_list srf_list.o ../io_lib/libstaden-read.la -lm
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o .libs/srf_list srf_list.o ../io_lib/.libs/libstaden-read.so -lm
creating srf_list
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
/bin/sh ../libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o srf_info srf_info.o ../io_lib/libstaden-read.la -lm
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o .libs/srf_info srf_info.o ../io_lib/.libs/libstaden-read.so -lm
creating srf_info
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
/bin/sh ../libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o srf_filter srf_filter.o ../io_lib/libstaden-read.la -lm
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o .libs/srf_filter srf_filter.o ../io_lib/.libs/libstaden-read.so -lm
creating srf_filter
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
Making all in tests
make[2]: Nothing to be done for 'all'.
make[2]: Nothing to be done for 'all-am'.
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.o4C3nw
+ umask 022
+ cd /builddir/build/BUILD
+ '[' /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le '!=' / ']'
+ rm -rf /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le
++ dirname /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le
+ mkdir -p /builddir/build/BUILDROOT
+ mkdir /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection'
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection'
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules'
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules'
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes'
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd io_lib-1.12.4
+ /usr/bin/make install DESTDIR=/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le 'INSTALL=/usr/bin/install -p'
Making install in io_lib
make[1]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
test -z "/usr/lib64" || mkdir -p -- "/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/lib64"
/bin/sh ../libtool --mode=install /usr/bin/install -p 'libstaden-read.la' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/lib64/libstaden-read.la'
/usr/bin/install -p .libs/libstaden-read.so.1.1.2 /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/lib64/libstaden-read.so.1.1.2
(cd /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/lib64 && { ln -s -f libstaden-read.so.1.1.2 libstaden-read.so.1 || { rm -f libstaden-read.so.1 && ln -s libstaden-read.so.1.1.2 libstaden-read.so.1; }; })
(cd /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/lib64 && { ln -s -f libstaden-read.so.1.1.2 libstaden-read.so || { rm -f libstaden-read.so && ln -s libstaden-read.so.1.1.2 libstaden-read.so; }; })
/usr/bin/install -p .libs/libstaden-read.lai /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/lib64/libstaden-read.la
libtool: install: warning: remember to run `libtool --finish /usr/lib64'
make[2]: Nothing to be done for 'install-data-am'.
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
make[1]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
Making install in progs
make[1]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
test -z "/usr/bin" || mkdir -p -- "/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin"
/bin/sh ../libtool --mode=install /usr/bin/install -p 'convert_trace' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/convert_trace'
libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -p .libs/convert_trace /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/convert_trace
/bin/sh ../libtool --mode=install /usr/bin/install -p 'makeSCF' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/makeSCF'
libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -p .libs/makeSCF /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/makeSCF
/bin/sh ../libtool --mode=install /usr/bin/install -p 'extract_seq' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/extract_seq'
libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -p .libs/extract_seq /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/extract_seq
/bin/sh ../libtool --mode=install /usr/bin/install -p 'extract_qual' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/extract_qual'
libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -p .libs/extract_qual /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/extract_qual
/bin/sh ../libtool --mode=install /usr/bin/install -p 'extract_fastq' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/extract_fastq'
libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -p .libs/extract_fastq /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/extract_fastq
/bin/sh ../libtool --mode=install /usr/bin/install -p 'index_tar' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/index_tar'
/usr/bin/install -p index_tar /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/index_tar
/bin/sh ../libtool --mode=install /usr/bin/install -p 'scf_dump' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/scf_dump'
libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -p .libs/scf_dump /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/scf_dump
/bin/sh ../libtool --mode=install /usr/bin/install -p 'scf_info' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/scf_info'
libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -p .libs/scf_info /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/scf_info
/bin/sh ../libtool --mode=install /usr/bin/install -p 'scf_update' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/scf_update'
libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -p .libs/scf_update /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/scf_update
/bin/sh ../libtool --mode=install /usr/bin/install -p 'get_comment' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/get_comment'
libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -p .libs/get_comment /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/get_comment
/bin/sh ../libtool --mode=install /usr/bin/install -p 'hash_tar' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/hash_tar'
libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -p .libs/hash_tar /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/hash_tar
/bin/sh ../libtool --mode=install /usr/bin/install -p 'hash_extract' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/hash_extract'
libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -p .libs/hash_extract /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/hash_extract
/bin/sh ../libtool --mode=install /usr/bin/install -p 'hash_list' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/hash_list'
libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -p .libs/hash_list /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/hash_list
/bin/sh ../libtool --mode=install /usr/bin/install -p 'trace_dump' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/trace_dump'
libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -p .libs/trace_dump /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/trace_dump
/bin/sh ../libtool --mode=install /usr/bin/install -p 'hash_sff' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/hash_sff'
libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -p .libs/hash_sff /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/hash_sff
/bin/sh ../libtool --mode=install /usr/bin/install -p 'append_sff' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/append_sff'
libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -p .libs/append_sff /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/append_sff
/bin/sh ../libtool --mode=install /usr/bin/install -p 'ztr_dump' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/ztr_dump'
libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -p .libs/ztr_dump /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/ztr_dump
/bin/sh ../libtool --mode=install /usr/bin/install -p 'srf_dump_all' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/srf_dump_all'
libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -p .libs/srf_dump_all /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/srf_dump_all
/bin/sh ../libtool --mode=install /usr/bin/install -p 'srf_index_hash' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/srf_index_hash'
libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -p .libs/srf_index_hash /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/srf_index_hash
/bin/sh ../libtool --mode=install /usr/bin/install -p 'srf_extract_linear' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/srf_extract_linear'
libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -p .libs/srf_extract_linear /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/srf_extract_linear
/bin/sh ../libtool --mode=install /usr/bin/install -p 'srf_extract_hash' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/srf_extract_hash'
libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -p .libs/srf_extract_hash /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/srf_extract_hash
/bin/sh ../libtool --mode=install /usr/bin/install -p 'srf2fastq' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/srf2fastq'
libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -p .libs/srf2fastq /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/srf2fastq
/bin/sh ../libtool --mode=install /usr/bin/install -p 'srf2fasta' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/srf2fasta'
libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -p .libs/srf2fasta /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/srf2fasta
/bin/sh ../libtool --mode=install /usr/bin/install -p 'srf_filter' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/srf_filter'
libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -p .libs/srf_filter /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/srf_filter
/bin/sh ../libtool --mode=install /usr/bin/install -p 'srf_info' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/srf_info'
libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -p .libs/srf_info /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/srf_info
/bin/sh ../libtool --mode=install /usr/bin/install -p 'srf_list' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/srf_list'
libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -p .libs/srf_list /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/srf_list
make[2]: Nothing to be done for 'install-data-am'.
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
make[1]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
Making install in tests
make[1]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/tests'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/tests'
make[2]: Nothing to be done for 'install-exec-am'.
make[2]: Nothing to be done for 'install-data-am'.
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/tests'
make[1]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/tests'
make[1]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4'
test -z "/usr/bin" || mkdir -p -- "/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin"
/usr/bin/install -p 'staden-io_lib-config' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/staden-io_lib-config'
test -z "/usr/share/man/man1" || mkdir -p -- "/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/share/man/man1"
/usr/bin/install -p -m 644 './man/man1/srf_index_hash.1' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/share/man/man1/srf_index_hash.1'
/usr/bin/install -p -m 644 './man/man1/srf_info.1' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/share/man/man1/srf_info.1'
/usr/bin/install -p -m 644 './man/man1/srf_list.1' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/share/man/man1/srf_list.1'
/usr/bin/install -p -m 644 './man/man1/srf2fasta.1' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/share/man/man1/srf2fasta.1'
/usr/bin/install -p -m 644 './man/man1/srf2fastq.1' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/share/man/man1/srf2fastq.1'
test -z "/usr/share/man/man3" || mkdir -p -- "/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/share/man/man3"
/usr/bin/install -p -m 644 './man/man3/read_scf_header.3' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/share/man/man3/read_scf_header.3'
/usr/bin/install -p -m 644 './man/man3/read_allocate.3' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/share/man/man3/read_allocate.3'
/usr/bin/install -p -m 644 './man/man3/ExperimentFile.3' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/share/man/man3/ExperimentFile.3'
/usr/bin/install -p -m 644 './man/man3/write_reading.3' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/share/man/man3/write_reading.3'
/usr/bin/install -p -m 644 './man/man3/write_scf.3' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/share/man/man3/write_scf.3'
/usr/bin/install -p -m 644 './man/man3/read_deallocate.3' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/share/man/man3/read_deallocate.3'
/usr/bin/install -p -m 644 './man/man3/fwrite_reading.3' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/share/man/man3/fwrite_reading.3'
/usr/bin/install -p -m 644 './man/man3/read2scf.3' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/share/man/man3/read2scf.3'
/usr/bin/install -p -m 644 './man/man3/scf2read.3' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/share/man/man3/scf2read.3'
/usr/bin/install -p -m 644 './man/man3/fwrite_scf.3' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/share/man/man3/fwrite_scf.3'
/usr/bin/install -p -m 644 './man/man3/write_scf_header.3' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/share/man/man3/write_scf_header.3'
/usr/bin/install -p -m 644 './man/man3/read_reading.3' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/share/man/man3/read_reading.3'
/usr/bin/install -p -m 644 './man/man3/read_scf.3' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/share/man/man3/read_scf.3'
/usr/bin/install -p -m 644 './man/man3/exp2read.3' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/share/man/man3/exp2read.3'
/usr/bin/install -p -m 644 './man/man3/fread_reading.3' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/share/man/man3/fread_reading.3'
/usr/bin/install -p -m 644 './man/man3/read2exp.3' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/share/man/man3/read2exp.3'
/usr/bin/install -p -m 644 './man/man3/fread_scf.3' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/share/man/man3/fread_scf.3'
test -z "/usr/share/man/man4" || mkdir -p -- "/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/share/man/man4"
/usr/bin/install -p -m 644 './man/man4/Read.4' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/share/man/man4/Read.4'
test -z "/usr/include/io_lib" || mkdir -p -- "/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/include/io_lib"
/usr/bin/install -p -m 644 'io_lib/Read.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/include/io_lib/Read.h'
/usr/bin/install -p -m 644 'io_lib/scf_extras.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/include/io_lib/scf_extras.h'
/usr/bin/install -p -m 644 'io_lib/translate.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/include/io_lib/translate.h'
/usr/bin/install -p -m 644 'io_lib/abi.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/include/io_lib/abi.h'
/usr/bin/install -p -m 644 'io_lib/fpoint.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/include/io_lib/fpoint.h'
/usr/bin/install -p -m 644 'io_lib/seqIOABI.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/include/io_lib/seqIOABI.h'
/usr/bin/install -p -m 644 'io_lib/alf.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/include/io_lib/alf.h'
/usr/bin/install -p -m 644 'io_lib/seqIOCTF.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/include/io_lib/seqIOCTF.h'
/usr/bin/install -p -m 644 'io_lib/expFileIO.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/include/io_lib/expFileIO.h'
/usr/bin/install -p -m 644 'io_lib/plain.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/include/io_lib/plain.h'
/usr/bin/install -p -m 644 'io_lib/scf.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/include/io_lib/scf.h'
/usr/bin/install -p -m 644 'io_lib/sff.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/include/io_lib/sff.h'
/usr/bin/install -p -m 644 'io_lib/array.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/include/io_lib/array.h'
/usr/bin/install -p -m 644 'io_lib/compress.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/include/io_lib/compress.h'
/usr/bin/install -p -m 644 'io_lib/error.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/include/io_lib/error.h'
/usr/bin/install -p -m 644 'io_lib/mach-io.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/include/io_lib/mach-io.h'
/usr/bin/install -p -m 644 'io_lib/misc.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/include/io_lib/misc.h'
/usr/bin/install -p -m 644 'io_lib/open_trace_file.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/include/io_lib/open_trace_file.h'
/usr/bin/install -p -m 644 'io_lib/tar_format.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/include/io_lib/tar_format.h'
/usr/bin/install -p -m 644 'io_lib/traceType.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/include/io_lib/traceType.h'
/usr/bin/install -p -m 644 'io_lib/xalloc.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/include/io_lib/xalloc.h'
/usr/bin/install -p -m 644 'io_lib/mFILE.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/include/io_lib/mFILE.h'
/usr/bin/install -p -m 644 'io_lib/stdio_hack.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/include/io_lib/stdio_hack.h'
/usr/bin/install -p -m 644 'io_lib/vlen.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/include/io_lib/vlen.h'
/usr/bin/install -p -m 644 'io_lib/hash_table.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/include/io_lib/hash_table.h'
/usr/bin/install -p -m 644 'io_lib/jenkins_lookup3.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/include/io_lib/jenkins_lookup3.h'
/usr/bin/install -p -m 644 'io_lib/os.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/include/io_lib/os.h'
/usr/bin/install -p -m 644 'io_lib/compression.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/include/io_lib/compression.h'
/usr/bin/install -p -m 644 'io_lib/ztr.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/include/io_lib/ztr.h'
/usr/bin/install -p -m 644 'io_lib/deflate_interlaced.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/include/io_lib/deflate_interlaced.h'
/usr/bin/install -p -m 644 'io_lib/srf.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/include/io_lib/srf.h'
/usr/bin/install -p -m 644 'io_lib/pooled_alloc.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/include/io_lib/pooled_alloc.h'
/usr/bin/install -p -m 644 'io_lib_config.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/include/io_lib/io_lib_config.h'
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4'
make[1]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4'
+ find /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le -name '*.la' -delete
+ /usr/bin/find-debuginfo -j5 --strict-build-id -m -i --build-id-seed 1.12.4-24.fc38 --unique-debug-suffix -1.12.4-24.fc38.ppc64le --unique-debug-src-base staden-io_lib-1.12.4-24.fc38.ppc64le --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/io_lib-1.12.4
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/extract_fastq
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/extract_qual
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/append_sff
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/convert_trace
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/extract_seq
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/get_comment
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/hash_extract
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/hash_list
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/hash_sff
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/hash_tar
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/index_tar
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/makeSCF
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/scf_dump
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/scf_info
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/scf_update
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/srf2fasta
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/srf2fastq
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/srf_dump_all
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/srf_extract_hash
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/srf_extract_linear
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/srf_filter
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/srf_index_hash
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/srf_info
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/srf_list
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/trace_dump
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/bin/ztr_dump
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/lib64/libstaden-read.so.1.1.2
original debug info size: 2560kB, size after compression: 2496kB
/usr/bin/sepdebugcrcfix: Updated 27 CRC32s, 0 CRC32s did match.
1828 blocks
+ /usr/lib/rpm/check-buildroot
+ /usr/lib/rpm/redhat/brp-ldconfig
+ /usr/lib/rpm/brp-compress
+ /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip
+ /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip
+ /usr/lib/rpm/check-rpaths
+ /usr/lib/rpm/redhat/brp-mangle-shebangs
mangling shebang in /usr/bin/staden-io_lib-config from /bin/sh to #!/usr/bin/sh
+ /usr/lib/rpm/brp-remove-la-files
+ /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0
+ /usr/lib/rpm/redhat/brp-python-hardlink
Processing files: staden-io_lib-1.12.4-24.fc38.ppc64le
Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.CxVxYA
+ umask 022
+ cd /builddir/build/BUILD
+ cd io_lib-1.12.4
+ DOCDIR=/builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/share/doc/staden-io_lib
+ export LC_ALL=C
+ LC_ALL=C
+ export DOCDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/share/doc/staden-io_lib
+ cp -pr README /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/share/doc/staden-io_lib
+ cp -pr COPYRIGHT /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/share/doc/staden-io_lib
+ cp -pr CHANGES /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/share/doc/staden-io_lib
+ cp -pr docs/ /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le/usr/share/doc/staden-io_lib
+ RPM_EC=0
++ jobs -p
+ exit 0
Provides: libstaden-read.so.1()(64bit) staden-io_lib = 1.12.4-24.fc38 staden-io_lib(ppc-64) = 1.12.4-24.fc38
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.17)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.34)(64bit) libcurl.so.4()(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.29)(64bit) libstaden-read.so.1()(64bit) libz.so.1()(64bit) rtld(GNU_HASH)
Processing files: staden-io_lib-devel-1.12.4-24.fc38.ppc64le
Provides: staden-io_lib-devel = 1.12.4-24.fc38 staden-io_lib-devel(ppc-64) = 1.12.4-24.fc38
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: /usr/bin/sh libstaden-read.so.1()(64bit)
Processing files: staden-io_lib-debugsource-1.12.4-24.fc38.ppc64le
Provides: staden-io_lib-debugsource = 1.12.4-24.fc38 staden-io_lib-debugsource(ppc-64) = 1.12.4-24.fc38
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Processing files: staden-io_lib-debuginfo-1.12.4-24.fc38.ppc64le
Provides: debuginfo(build-id) = 0c5c29616e6ed2f39d52afab2d25d0807648c347 debuginfo(build-id) = 1ea4d12ca63badb2ac91e018d0596bbca77ef395 debuginfo(build-id) = 3020a6b17fa312ada8848a39137f515721edfff6 debuginfo(build-id) = 36af569b415a5336b900e55dc9dd7a60e83d5db6 debuginfo(build-id) = 3de85a814e73db3c9f55e0ee2489b993409fb46a debuginfo(build-id) = 47ba688ee1fb5ce7a7cf3024a97fcbafc726b0c7 debuginfo(build-id) = 6296f0e4d8c1496b7f9a6c26ce82f29594663126 debuginfo(build-id) = 62dc1c5e06b56ddd99a4589031e747fc271ee5ef debuginfo(build-id) = 6476f1a5ae755fb071121e1061cee89550bcb9aa debuginfo(build-id) = 6a79847e482613a10bdd31d0f02ae16881e01f21 debuginfo(build-id) = 81c033a27028d84172e31f1d80b41b25919dfb13 debuginfo(build-id) = 891d97d8d9ff24b1b491ffc9527203ad1de9bca6 debuginfo(build-id) = 9a9acd9f0e14dd50d2b5b602f49627ba02d13d5c debuginfo(build-id) = a0a3bc83dc820b55bb4b6424692c49e2231c3ee7 debuginfo(build-id) = a6d8dcfd22d95a94a3e381512fede0c9f2bf992d debuginfo(build-id) = b1c5c8bd84ffa63da0af71e602a7c588a606a0d4 debuginfo(build-id) = b962dd2a06f62ea82492ad618e7232364b61bb28 debuginfo(build-id) = bfa5f2be2b3605ff8e2e6fd6cd489ea195f4240c debuginfo(build-id) = c14030dc16010908c6eadcc106796c87271ebec1 debuginfo(build-id) = c91947f3dfbd41c078c2a7ca6edde261ec16568a debuginfo(build-id) = d79b0ffad620109170dc534a70b3454525075736 debuginfo(build-id) = d7d234795ea72fb6a4a769ec9df39b5032270c24 debuginfo(build-id) = e5cd908ed4442b24f4ebff61036bb580dabdbb49 debuginfo(build-id) = ecc926945fc5041e1390efb7e5a4ab3acf877985 debuginfo(build-id) = f1854498f2a0727bba7f308a6753bac65e002ca0 debuginfo(build-id) = f1a51a19a2881e25090e5c307b5d556af49956a2 debuginfo(build-id) = fad05d4eaf9cf67a086ac1f51541802f7683abe9 libstaden-read.so.1.1.2-1.12.4-24.fc38.ppc64le.debug()(64bit) staden-io_lib-debuginfo = 1.12.4-24.fc38 staden-io_lib-debuginfo(ppc-64) = 1.12.4-24.fc38
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: staden-io_lib-debugsource(ppc-64) = 1.12.4-24.fc38
Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le
Wrote: /builddir/build/RPMS/staden-io_lib-devel-1.12.4-24.fc38.ppc64le.rpm
Wrote: /builddir/build/RPMS/staden-io_lib-debugsource-1.12.4-24.fc38.ppc64le.rpm
Wrote: /builddir/build/RPMS/staden-io_lib-1.12.4-24.fc38.ppc64le.rpm
Wrote: /builddir/build/RPMS/staden-io_lib-debuginfo-1.12.4-24.fc38.ppc64le.rpm
Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.f8ttrN
+ umask 022
+ cd /builddir/build/BUILD
+ cd io_lib-1.12.4
+ /usr/bin/rm -rf /builddir/build/BUILDROOT/staden-io_lib-1.12.4-24.fc38.ppc64le
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.rYrAO5
+ umask 022
+ cd /builddir/build/BUILD
+ rm -rf io_lib-1.12.4 io_lib-1.12.4.gemspec
+ RPM_EC=0
++ jobs -p
+ exit 0
Child return code was: 0