Mock Version: 3.5
ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs  --target x86_64 --nodeps /builddir/build/SPECS/netcdf4-python.spec'], chrootPath='/var/lib/mock/fedora-rawhide-x86_64-1672104681.335250/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=<mockbuild.trace_decorator.getLog object at 0x7fa6a99bca90>timeout=0uid=1001gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.z2qtpi3b:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueprintOutput=True)
Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.z2qtpi3b:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']
Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '5780a4eb37ca4fbabfb994ce78859545', '-D', '/var/lib/mock/fedora-rawhide-x86_64-1672104681.335250/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.z2qtpi3b:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;<mock-chroot>\\007"', '--setenv=PS1=<mock-chroot> \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -bs  --target x86_64 --nodeps /builddir/build/SPECS/netcdf4-python.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False
Building target platforms: x86_64
Building for target x86_64
setting SOURCE_DATE_EPOCH=1671148800
Wrote: /builddir/build/SRPMS/netcdf4-python-1.6.2-1.fc38.src.rpm
Child return code was: 0
ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb  --target x86_64 --nodeps /builddir/build/SPECS/netcdf4-python.spec'], chrootPath='/var/lib/mock/fedora-rawhide-x86_64-1672104681.335250/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=<mockbuild.trace_decorator.getLog object at 0x7fa6a99bca90>timeout=0uid=1001gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.z2qtpi3b:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueprintOutput=True)
Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.z2qtpi3b:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']
Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '81184c6dff70487c9b50c3b07fab8e02', '-D', '/var/lib/mock/fedora-rawhide-x86_64-1672104681.335250/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.z2qtpi3b:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;<mock-chroot>\\007"', '--setenv=PS1=<mock-chroot> \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -bb  --target x86_64 --nodeps /builddir/build/SPECS/netcdf4-python.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False
Building target platforms: x86_64
Building for target x86_64
setting SOURCE_DATE_EPOCH=1671148800
Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.I5jAQa
+ umask 022
+ cd /builddir/build/BUILD
+ cd /builddir/build/BUILD
+ rm -rf netcdf4-python-1.6.2rel
+ /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/netcdf4-python-1.6.2.tar.gz
+ STATUS=0
+ '[' 0 -ne 0 ']'
+ cd netcdf4-python-1.6.2rel
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w .
+ echo 'Patch #0 (netcdf4-python-norpath.patch):'
Patch #0 (netcdf4-python-norpath.patch):
+ /usr/bin/patch --no-backup-if-mismatch -f -p1 -b --suffix .norpath --fuzz=0
patching file setup.py
Hunk #1 succeeded at 523 (offset 30 lines).
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.5D4Odf
+ umask 022
+ cd /builddir/build/BUILD
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64  -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection'
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64  -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection'
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64  -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules'
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64  -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules'
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes'
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd netcdf4-python-1.6.2rel
+ export USE_NCCONFIG=1
+ USE_NCCONFIG=1
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64  -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection'
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes'
+ /usr/bin/python3 setup.py build '--executable=/usr/bin/python3 -sP'
Package hdf5 was not found in the pkg-config search path.
Perhaps you should add the directory containing `hdf5.pc'
to the PKG_CONFIG_PATH environment variable
Package 'hdf5', required by 'virtual:world', not found
reading from setup.cfg...
using nc-config...
checking /usr/include ...
HDF5 library version: 1.12.1 headers found in /usr/include
using netcdf library version b'4.9.0'
using Cython to compile netCDF4.pyx...
netcdf lib has group rename capability
netcdf lib has nc_inq_path function
netcdf lib has nc_inq_format_extended function
netcdf lib has nc_open_mem function
netcdf lib has nc_create_mem function
netcdf lib has cdf-5 format capability
netcdf lib does not have netcdf4 parallel functions
netcdf lib does not have pnetcdf parallel functions
netcdf lib has bit-grooming/quantization functions
netcdf lib has zstandard compression functions
netcdf lib has bzip2 compression functions
netcdf lib has blosc compression functions
netcdf lib has szip compression functions
netcdf lib has nc_set_alignment function
netcdf lib has nc_inq_filter_avail function
NETCDF_PLUGIN_DIR not set, no netcdf compression plugins installed
running build
running build_py
creating build
creating build/lib.linux-x86_64-cpython-311
creating build/lib.linux-x86_64-cpython-311/netCDF4
copying src/netCDF4/utils.py -> build/lib.linux-x86_64-cpython-311/netCDF4
copying src/netCDF4/__init__.py -> build/lib.linux-x86_64-cpython-311/netCDF4
running build_ext
cythoning src/netCDF4/_netCDF4.pyx to src/netCDF4/_netCDF4.c
building 'netCDF4._netCDF4' extension
creating build/temp.linux-x86_64-cpython-311
creating build/temp.linux-x86_64-cpython-311/src
creating build/temp.linux-x86_64-cpython-311/src/netCDF4
gcc -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -I/usr/include -I/usr/include/hdf -I/usr/lib64/python3.11/site-packages/numpy/core/include -Iinclude -I/usr/include/python3.11 -c src/netCDF4/_netCDF4.c -o build/temp.linux-x86_64-cpython-311/src/netCDF4/_netCDF4.o
src/netCDF4/_netCDF4.c: In function ‘__pyx_pf_7netCDF4_8_netCDF4_7_MemBuf_4__dealloc__’:
src/netCDF4/_netCDF4.c:4971:20: warning: passing argument 1 of ‘free’ discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers]
 4971 |   free(__pyx_v_self->memory);
      |        ~~~~~~~~~~~~^~~~~~~~
In file included from /usr/include/python3.11/Python.h:23,
                 from src/netCDF4/_netCDF4.c:6:
/usr/include/stdlib.h:568:25: note: expected ‘void *’ but argument is of type ‘const void *’
  568 | extern void free (void *__ptr) __THROW;
      |                   ~~~~~~^~~~~
src/netCDF4/_netCDF4.c: In function ‘__pyx_f_7netCDF4_8_netCDF4__set_att’:
src/netCDF4/_netCDF4.c:9587:106: warning: passing argument 5 of ‘nc_put_att_string’ from incompatible pointer type [-Wincompatible-pointer-types]
 9587 |               __pyx_v_ierr = nc_put_att_string(__pyx_v_grpid, __pyx_v_varid, __pyx_v_attname, __pyx_v_N, __pyx_v_string_ptrs);
      |                                                                                                          ^~~~~~~~~~~~~~~~~~~
      |                                                                                                          |
      |                                                                                                          char **
In file included from src/netCDF4/_netCDF4.c:749:
/usr/include/netcdf.h:1110:44: note: expected ‘const char **’ but argument is of type ‘char **’
 1110 |                   size_t len, const char **op);
      |                               ~~~~~~~~~~~~~^~
src/netCDF4/_netCDF4.c:10084:103: warning: passing argument 5 of ‘nc_put_att_string’ from incompatible pointer type [-Wincompatible-pointer-types]
10084 |                   __pyx_v_ierr = nc_put_att_string(__pyx_v_grpid, __pyx_v_varid, __pyx_v_attname, 1, (&__pyx_v_datstring));
      |                                                                                                      ~^~~~~~~~~~~~~~~~~~~
      |                                                                                                       |
      |                                                                                                       char **
/usr/include/netcdf.h:1110:44: note: expected ‘const char **’ but argument is of type ‘char **’
 1110 |                   size_t len, const char **op);
      |                               ~~~~~~~~~~~~~^~
src/netCDF4/_netCDF4.c: In function ‘__pyx_f_7netCDF4_8_netCDF4__read_compound’:
src/netCDF4/_netCDF4.c:69249:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
69249 |   for (__pyx_v_nf = 0; __pyx_v_nf < __pyx_t_4; __pyx_v_nf++) {
      |                                   ^
src/netCDF4/_netCDF4.c: In function ‘__pyx_f_7netCDF4_8_netCDF4__read_enum’:
src/netCDF4/_netCDF4.c:73259:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
73259 |   for (__pyx_v_nmem = 0; __pyx_v_nmem < __pyx_t_11; __pyx_v_nmem++) {
      |                                       ^
src/netCDF4/_netCDF4.c: In function ‘__pyx_pymod_exec__netCDF4’:
src/netCDF4/_netCDF4.c:93376:3: warning: returning ‘void *’ from a function with return type ‘int’ makes integer from pointer without a cast [-Wint-conversion]
93376 |   import_array();
      |   ^~~~~~~~~~~~
src/netCDF4/_netCDF4.c: In function ‘__pyx_f_7netCDF4_8_netCDF4__get_types’:
src/netCDF4/_netCDF4.c:10525:12: warning: ‘__pyx_v_typeids’ may be used uninitialized [-Wmaybe-uninitialized]
10525 |   nc_type *__pyx_v_typeids;
      |            ^~~~~~~~~~~~~~~
In function ‘__Pyx_PyInt_From_int’,
    inlined from ‘__pyx_pf_7netCDF4_8_netCDF4_7Dataset___init__’ at src/netCDF4/_netCDF4.c:17378:15,
    inlined from ‘__pyx_pw_7netCDF4_8_netCDF4_7Dataset_1__init__’ at src/netCDF4/_netCDF4.c:14957:13:
src/netCDF4/_netCDF4.c:658:40: warning: ‘__pyx_v_ierr’ may be used uninitialized [-Wmaybe-uninitialized]
  658 |   #define PyInt_FromLong               PyLong_FromLong
      |                                        ^
src/netCDF4/_netCDF4.c: In function ‘__pyx_pw_7netCDF4_8_netCDF4_7Dataset_1__init__’:
src/netCDF4/_netCDF4.c:14975:7: note: ‘__pyx_v_ierr’ was declared here
14975 |   int __pyx_v_ierr;
      |       ^~~~~~~~~~~~
src/netCDF4/_netCDF4.c: In function ‘__pyx_pf_7netCDF4_8_netCDF4_8Variable___init__’:
src/netCDF4/_netCDF4.c:37156:28: warning: ‘__pyx_v_dimids’ may be used uninitialized [-Wmaybe-uninitialized]
37156 |             __pyx_v_ierr = nc_def_var(__pyx_v_self->_grpid, __pyx_v_varname, __pyx_v_xtype, __pyx_v_ndims, __pyx_v_dimids, (&__pyx_v_self->_varid));
      |                            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
src/netCDF4/_netCDF4.c:35439:8: note: ‘__pyx_v_dimids’ was declared here
35439 |   int *__pyx_v_dimids;
      |        ^~~~~~~~~~~~~~
gcc -shared -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -Wl,--build-id=sha1 -g -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -Wl,--build-id=sha1 -g -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection build/temp.linux-x86_64-cpython-311/src/netCDF4/_netCDF4.o -L/usr/lib64 -L/usr/lib64 -lnetcdf -o build/lib.linux-x86_64-cpython-311/netCDF4/_netCDF4.cpython-311-x86_64-linux-gnu.so
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.QWiVdh
+ umask 022
+ cd /builddir/build/BUILD
+ '[' /builddir/build/BUILDROOT/netcdf4-python-1.6.2-1.fc38.x86_64 '!=' / ']'
+ rm -rf /builddir/build/BUILDROOT/netcdf4-python-1.6.2-1.fc38.x86_64
++ dirname /builddir/build/BUILDROOT/netcdf4-python-1.6.2-1.fc38.x86_64
+ mkdir -p /builddir/build/BUILDROOT
+ mkdir /builddir/build/BUILDROOT/netcdf4-python-1.6.2-1.fc38.x86_64
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64  -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection'
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64  -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection'
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64  -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules'
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64  -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules'
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes'
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd netcdf4-python-1.6.2rel
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64  -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection'
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes'
+ /usr/bin/python3 setup.py install -O1 --skip-build --root /builddir/build/BUILDROOT/netcdf4-python-1.6.2-1.fc38.x86_64 --prefix /usr
Package hdf5 was not found in the pkg-config search path.
Perhaps you should add the directory containing `hdf5.pc'
to the PKG_CONFIG_PATH environment variable
Package 'hdf5', required by 'virtual:world', not found
reading from setup.cfg...
using nc-config...
checking /usr/include ...
HDF5 library version: 1.12.1 headers found in /usr/include
using netcdf library version b'4.9.0'
using Cython to compile netCDF4.pyx...
netcdf lib has group rename capability
netcdf lib has nc_inq_path function
netcdf lib has nc_inq_format_extended function
netcdf lib has nc_open_mem function
netcdf lib has nc_create_mem function
netcdf lib has cdf-5 format capability
netcdf lib does not have netcdf4 parallel functions
netcdf lib does not have pnetcdf parallel functions
netcdf lib has bit-grooming/quantization functions
netcdf lib has zstandard compression functions
netcdf lib has bzip2 compression functions
netcdf lib has blosc compression functions
netcdf lib has szip compression functions
netcdf lib has nc_set_alignment function
netcdf lib has nc_inq_filter_avail function
NETCDF_PLUGIN_DIR not set, no netcdf compression plugins installed
running install
/usr/lib/python3.11/site-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools.
  warnings.warn(
running install_lib
creating /builddir/build/BUILDROOT/netcdf4-python-1.6.2-1.fc38.x86_64/usr
creating /builddir/build/BUILDROOT/netcdf4-python-1.6.2-1.fc38.x86_64/usr/lib64
creating /builddir/build/BUILDROOT/netcdf4-python-1.6.2-1.fc38.x86_64/usr/lib64/python3.11
creating /builddir/build/BUILDROOT/netcdf4-python-1.6.2-1.fc38.x86_64/usr/lib64/python3.11/site-packages
creating /builddir/build/BUILDROOT/netcdf4-python-1.6.2-1.fc38.x86_64/usr/lib64/python3.11/site-packages/netCDF4
copying build/lib.linux-x86_64-cpython-311/netCDF4/_netCDF4.cpython-311-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/netcdf4-python-1.6.2-1.fc38.x86_64/usr/lib64/python3.11/site-packages/netCDF4
copying build/lib.linux-x86_64-cpython-311/netCDF4/__init__.py -> /builddir/build/BUILDROOT/netcdf4-python-1.6.2-1.fc38.x86_64/usr/lib64/python3.11/site-packages/netCDF4
copying build/lib.linux-x86_64-cpython-311/netCDF4/utils.py -> /builddir/build/BUILDROOT/netcdf4-python-1.6.2-1.fc38.x86_64/usr/lib64/python3.11/site-packages/netCDF4
byte-compiling /builddir/build/BUILDROOT/netcdf4-python-1.6.2-1.fc38.x86_64/usr/lib64/python3.11/site-packages/netCDF4/__init__.py to __init__.cpython-311.pyc
byte-compiling /builddir/build/BUILDROOT/netcdf4-python-1.6.2-1.fc38.x86_64/usr/lib64/python3.11/site-packages/netCDF4/utils.py to utils.cpython-311.pyc
writing byte-compilation script '/tmp/tmpwgi5bpy5.py'
/usr/bin/python3 /tmp/tmpwgi5bpy5.py
removing /tmp/tmpwgi5bpy5.py
running install_egg_info
running egg_info
creating src/netCDF4.egg-info
writing src/netCDF4.egg-info/PKG-INFO
writing dependency_links to src/netCDF4.egg-info/dependency_links.txt
writing entry points to src/netCDF4.egg-info/entry_points.txt
writing requirements to src/netCDF4.egg-info/requires.txt
writing top-level names to src/netCDF4.egg-info/top_level.txt
writing manifest file 'src/netCDF4.egg-info/SOURCES.txt'
reading manifest file 'src/netCDF4.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
warning: no previously-included files found matching 'examples/data'
warning: no previously-included files found matching 'src/netCDF4/_netCDF4.c'
adding license file 'LICENSE'
writing manifest file 'src/netCDF4.egg-info/SOURCES.txt'
Copying src/netCDF4.egg-info to /builddir/build/BUILDROOT/netcdf4-python-1.6.2-1.fc38.x86_64/usr/lib64/python3.11/site-packages/netCDF4-1.6.2-py3.11.egg-info
running install_scripts
Installing nc3tonc4 script to /builddir/build/BUILDROOT/netcdf4-python-1.6.2-1.fc38.x86_64/usr/bin
Installing nc4tonc3 script to /builddir/build/BUILDROOT/netcdf4-python-1.6.2-1.fc38.x86_64/usr/bin
Installing ncinfo script to /builddir/build/BUILDROOT/netcdf4-python-1.6.2-1.fc38.x86_64/usr/bin
+ rm -rfv /builddir/build/BUILDROOT/netcdf4-python-1.6.2-1.fc38.x86_64/usr/bin/__pycache__
+ /usr/bin/find-debuginfo -j2 --strict-build-id -m -i --build-id-seed 1.6.2-1.fc38 --unique-debug-suffix -1.6.2-1.fc38.x86_64 --unique-debug-src-base netcdf4-python-1.6.2-1.fc38.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/netcdf4-python-1.6.2rel
extracting debug info from /builddir/build/BUILDROOT/netcdf4-python-1.6.2-1.fc38.x86_64/usr/lib64/python3.11/site-packages/netCDF4/_netCDF4.cpython-311-x86_64-linux-gnu.so
original debug info size: 5048kB, size after compression: 4908kB
/usr/bin/sepdebugcrcfix: Updated 1 CRC32s, 0 CRC32s did match.
cpio: src/netCDF4/_netCDF4.c: Cannot stat: No such file or directory
0 blocks
+ /usr/lib/rpm/check-buildroot
+ /usr/lib/rpm/redhat/brp-ldconfig
+ /usr/lib/rpm/brp-compress
+ /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip
+ /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip
+ /usr/lib/rpm/check-rpaths
+ /usr/lib/rpm/redhat/brp-mangle-shebangs
+ /usr/lib/rpm/brp-remove-la-files
+ /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0
Bytecompiling .py files below /builddir/build/BUILDROOT/netcdf4-python-1.6.2-1.fc38.x86_64/usr/lib/debug/usr/lib64/python3.11 using python3.11
Bytecompiling .py files below /builddir/build/BUILDROOT/netcdf4-python-1.6.2-1.fc38.x86_64/usr/lib64/python3.11 using python3.11
+ /usr/lib/rpm/redhat/brp-python-hardlink
Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.P2aZ22
+ umask 022
+ cd /builddir/build/BUILD
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64  -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection'
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64  -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection'
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64  -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules'
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64  -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules'
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes'
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd netcdf4-python-1.6.2rel
+ cd test
+ export NO_NET=1
+ NO_NET=1
++ echo ../build/lib.linux-x86_64-cpython-311
+ PYTHONPATH=../build/lib.linux-x86_64-cpython-311
+ /usr/bin/python3 run_all.py
......................../builddir/build/BUILD/netcdf4-python-1.6.2rel/test/tst_types.py:88: UserWarning: WARNING: missing_value not used since it
cannot be safely cast to variable data type
  assert_array_equal(v3[:],-1*np.ones(n2dim,v3.dtype))
........................................./builddir/build/BUILD/netcdf4-python-1.6.2rel/test/tst_masked.py:93: UserWarning: WARNING: missing_value not used since it
cannot be safely cast to variable data type
  data = dataset['v'][:]
......................................
----------------------------------------------------------------------
not running tst_dap.py ...
netcdf4-python version: 1.6.2
HDF5 lib version:       1.12.1
netcdf lib version:     4.9.0
numpy version           1.23.5
cython version          0.29.32
compressed lossy with shuffle and standard quantization =  187786  max err =  0.00024412649216776217
compressed lossy with shuffle and alternate quantization =  155323  max err =  0.00048827664779071966
compressed lossy with shuffle and alternate quantization =  163141  max err =  0.0002441384040609007
Ran 103 tests in 6.673s
OK
+ RPM_EC=0
++ jobs -p
+ exit 0
Processing files: netcdf4-python-1.6.2-1.fc38.x86_64
Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.LEn1oG
+ umask 022
+ cd /builddir/build/BUILD
+ cd netcdf4-python-1.6.2rel
+ LICENSEDIR=/builddir/build/BUILDROOT/netcdf4-python-1.6.2-1.fc38.x86_64/usr/share/licenses/netcdf4-python
+ export LC_ALL=C
+ LC_ALL=C
+ export LICENSEDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/netcdf4-python-1.6.2-1.fc38.x86_64/usr/share/licenses/netcdf4-python
+ cp -pr LICENSE /builddir/build/BUILDROOT/netcdf4-python-1.6.2-1.fc38.x86_64/usr/share/licenses/netcdf4-python
+ RPM_EC=0
++ jobs -p
+ exit 0
Provides: netcdf4-python = 1.6.2-1.fc38 netcdf4-python(x86-64) = 1.6.2-1.fc38
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: /usr/bin/python3
Processing files: python3-netcdf4-1.6.2-1.fc38.x86_64
Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.rQvH4t
+ umask 022
+ cd /builddir/build/BUILD
+ cd netcdf4-python-1.6.2rel
+ DOCDIR=/builddir/build/BUILDROOT/netcdf4-python-1.6.2-1.fc38.x86_64/usr/share/doc/python3-netcdf4
+ export LC_ALL=C
+ LC_ALL=C
+ export DOCDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/netcdf4-python-1.6.2-1.fc38.x86_64/usr/share/doc/python3-netcdf4
+ cp -pr Changelog /builddir/build/BUILDROOT/netcdf4-python-1.6.2-1.fc38.x86_64/usr/share/doc/python3-netcdf4
+ cp -pr docs /builddir/build/BUILDROOT/netcdf4-python-1.6.2-1.fc38.x86_64/usr/share/doc/python3-netcdf4
+ cp -pr examples /builddir/build/BUILDROOT/netcdf4-python-1.6.2-1.fc38.x86_64/usr/share/doc/python3-netcdf4
+ cp -pr README.md /builddir/build/BUILDROOT/netcdf4-python-1.6.2-1.fc38.x86_64/usr/share/doc/python3-netcdf4
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.F5LBBW
+ umask 022
+ cd /builddir/build/BUILD
+ cd netcdf4-python-1.6.2rel
+ LICENSEDIR=/builddir/build/BUILDROOT/netcdf4-python-1.6.2-1.fc38.x86_64/usr/share/licenses/python3-netcdf4
+ export LC_ALL=C
+ LC_ALL=C
+ export LICENSEDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/netcdf4-python-1.6.2-1.fc38.x86_64/usr/share/licenses/python3-netcdf4
+ cp -pr LICENSE /builddir/build/BUILDROOT/netcdf4-python-1.6.2-1.fc38.x86_64/usr/share/licenses/python3-netcdf4
+ RPM_EC=0
++ jobs -p
+ exit 0
Provides: netcdf4-python3 = 1.6.2-1.fc38 python-netcdf4 = 1.6.2-1.fc38 python3-netcdf4 = 1.6.2-1.fc38 python3-netcdf4(x86-64) = 1.6.2-1.fc38 python3.11-netcdf4 = 1.6.2-1.fc38 python3.11dist(netcdf4) = 1.6.2 python3dist(netcdf4) = 1.6.2
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.4)(64bit) libnetcdf.so.19()(64bit) python(abi) = 3.11 python3.11dist(cftime) python3.11dist(numpy) >= 1.9 rtld(GNU_HASH)
Obsoletes: netcdf4-python3 < 1.2.7-3 python-netcdf4 < 1.6.2-1.fc38
Processing files: netcdf4-python-debugsource-1.6.2-1.fc38.x86_64
Provides: netcdf4-python-debugsource = 1.6.2-1.fc38 netcdf4-python-debugsource(x86-64) = 1.6.2-1.fc38
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Processing files: python3-netcdf4-debuginfo-1.6.2-1.fc38.x86_64
Provides: debuginfo(build-id) = b315448513c23e42fb244ea9cc7d78fcabf17951 python-netcdf4-debuginfo = 1.6.2-1.fc38 python3-netcdf4-debuginfo = 1.6.2-1.fc38 python3-netcdf4-debuginfo(x86-64) = 1.6.2-1.fc38 python3.11-netcdf4-debuginfo = 1.6.2-1.fc38
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: netcdf4-python-debugsource(x86-64) = 1.6.2-1.fc38
Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/netcdf4-python-1.6.2-1.fc38.x86_64
Wrote: /builddir/build/RPMS/python3-netcdf4-1.6.2-1.fc38.x86_64.rpm
Wrote: /builddir/build/RPMS/netcdf4-python-1.6.2-1.fc38.x86_64.rpm
Wrote: /builddir/build/RPMS/netcdf4-python-debugsource-1.6.2-1.fc38.x86_64.rpm
Wrote: /builddir/build/RPMS/python3-netcdf4-debuginfo-1.6.2-1.fc38.x86_64.rpm
Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.nGTgtY
+ umask 022
+ cd /builddir/build/BUILD
+ cd netcdf4-python-1.6.2rel
+ /usr/bin/rm -rf /builddir/build/BUILDROOT/netcdf4-python-1.6.2-1.fc38.x86_64
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.byX9aE
+ umask 022
+ cd /builddir/build/BUILD
+ rm -rf netcdf4-python-1.6.2rel netcdf4-python-1.6.2rel.gemspec
+ RPM_EC=0
++ jobs -p
+ exit 0
Child return code was: 0