Warning: Permanently added '2620:52:3:1:dead:beef:cafe:c1d4' (ED25519) to the list of known hosts. You can reproduce this build on your computer by running: sudo dnf install copr-rpmbuild /usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/6065810-fedora-rawhide-i386 --chroot fedora-rawhide-i386 Version: 0.68 PID: 4973 Logging PID: 4974 Task: {'appstream': False, 'background': False, 'bootstrap': 'off', 'build_id': 6065810, 'buildroot_pkgs': [], 'chroot': 'fedora-rawhide-i386', 'enable_net': False, 'fedora_review': False, 'git_hash': '297b740224b3da7d7f999c11652b0371541bfe9d', 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/jaruga/staging/bwa', 'isolation': 'default', 'memory_reqs': 2048, 'package_name': 'bwa', 'package_version': '0.7.17-9.fc39', 'project_dirname': 'staging', 'project_name': 'staging', 'project_owner': 'jaruga', 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/jaruga/staging/fedora-rawhide-i386/', 'id': 'copr_base', 'name': 'Copr repository'}], 'sandbox': 'jaruga/staging--jaruga', 'source_json': {}, 'source_type': None, 'submitter': 'jaruga', 'tags': [], 'task_id': '6065810-fedora-rawhide-i386', 'timeout': 18000, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/jaruga/staging/bwa /var/lib/copr-rpmbuild/workspace/workdir-67pq1xwj/bwa --depth 500 --no-single-branch --recursive cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/jaruga/staging/bwa', '/var/lib/copr-rpmbuild/workspace/workdir-67pq1xwj/bwa', '--depth', '500', '--no-single-branch', '--recursive'] cwd: . rc: 0 stdout: stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-67pq1xwj/bwa'... Running: git checkout 297b740224b3da7d7f999c11652b0371541bfe9d -- cmd: ['git', 'checkout', '297b740224b3da7d7f999c11652b0371541bfe9d', '--'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-67pq1xwj/bwa rc: 0 stdout: stderr: Note: switching to '297b740224b3da7d7f999c11652b0371541bfe9d'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at 297b740 automatic import of bwa Running: copr-distgit-client sources cmd: ['copr-distgit-client', 'sources'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-67pq1xwj/bwa rc: 0 stdout: stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD INFO: Reading sources specification file: sources INFO: Downloading bwa-0.7.17.tar.bz2 INFO: Calling: curl -H Pragma: -o bwa-0.7.17.tar.bz2 --location --remote-time --show-error --fail https://copr-dist-git.fedorainfracloud.org/repo/pkgs/jaruga/staging/bwa/bwa-0.7.17.tar.bz2/md5/82cba7ef695538e6a38b9d4156837381/bwa-0.7.17.tar.bz2 % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 186k 100 186k 0 0 2295k 0 --:--:-- --:--:-- --:--:-- 2301k INFO: Reading stdout from command: md5sum bwa-0.7.17.tar.bz2 /usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated Running (timeout=18000): unbuffer mock --buildsrpm --spec /var/lib/copr-rpmbuild/workspace/workdir-67pq1xwj/bwa/bwa.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-67pq1xwj/bwa --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1686591774.156479 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 4.1 starting (python version = 3.11.3, NVR = mock-4.1-1.fc38)... Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-67pq1xwj/bwa/bwa.spec) Config(fedora-rawhide-i686) Start: clean chroot Finish: clean chroot Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-i686-1686591774.156479/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin Mock Version: 4.1 INFO: Mock Version: 4.1 INFO: Package manager dnf detected and used (fallback) Start: installing minimal buildroot with dnf No matches found for the following disable plugin patterns: local, spacewalk, versionlock Updating Subscription Management repositories. Unable to read consumer identity This system is not registered with an entitlement server. You can use subscription-manager to register. Copr repository 142 kB/s | 19 kB 00:00 local 52 MB/s | 60 MB 00:01 Dependencies resolved. ================================================================================ Package Arch Version Repo Size ================================================================================ Installing group/module packages: bash i686 5.2.15-3.fc38 local 1.8 M bzip2 i686 1.0.8-13.fc38 local 53 k coreutils i686 9.3-1.fc39 local 1.1 M cpio i686 2.14-2.fc39 local 277 k diffutils i686 3.9-4.fc39 local 393 k fedora-release noarch 39-0.14 local 6.6 k findutils i686 1:4.9.0-4.fc39 local 493 k gawk i686 5.2.2-1.fc39 local 1.0 M glibc-minimal-langpack i686 2.37.9000-13.fc39 local 59 k grep i686 3.11-1.fc39 local 294 k gzip i686 1.12-3.fc38 local 157 k info i686 7.0.3-2.fc39 local 183 k patch i686 2.7.6-21.fc39 local 138 k redhat-rpm-config noarch 254-1.fc39 local 76 k rpm-build i686 4.18.91-1.fc39 local 69 k sed i686 4.8-12.fc38 local 300 k shadow-utils i686 2:4.13-7.fc39 local 1.2 M tar i686 2:1.34-8.fc39 local 895 k unzip i686 6.0-60.fc38 local 179 k util-linux i686 2.39-4.fc39 local 1.2 M which i686 2.21-39.fc39 local 42 k xz i686 5.4.3-1.fc39 local 533 k Installing dependencies: alternatives i686 1.24-1.fc39 local 40 k ansible-srpm-macros noarch 1-10.fc39 local 21 k audit-libs i686 3.1.1-1.fc39 local 124 k authselect i686 1.4.2-2.fc38 local 141 k authselect-libs i686 1.4.2-2.fc38 local 239 k basesystem noarch 11-17.fc39 local 7.0 k binutils i686 2.40-9.fc39 local 5.8 M binutils-gold i686 2.40-9.fc39 local 864 k bzip2-libs i686 1.0.8-13.fc38 local 42 k ca-certificates noarch 2023.2.60-2.fc38 local 845 k coreutils-common i686 9.3-1.fc39 local 2.1 M cracklib i686 2.9.7-31.fc38 local 81 k crypto-policies noarch 20230420-1.git3d08ae7.fc39 local 65 k curl i686 8.1.2-1.fc39 local 347 k cyrus-sasl-lib i686 2.1.28-10.fc39 local 856 k debugedit i686 5.0-7.fc38 local 79 k dwz i686 0.15-2.fc38 local 139 k ed i686 1.19-2.fc38 local 78 k efi-srpm-macros noarch 5-8.fc39 local 22 k elfutils i686 0.189-2.fc39 local 551 k elfutils-debuginfod-client i686 0.189-2.fc39 local 40 k elfutils-default-yama-scope noarch 0.189-2.fc39 local 15 k elfutils-libelf i686 0.189-2.fc39 local 203 k elfutils-libs i686 0.189-2.fc39 local 290 k fedora-gpg-keys noarch 39-0.1 local 116 k fedora-release-common noarch 39-0.14 local 17 k fedora-release-identity-basic noarch 39-0.14 local 7.4 k fedora-repos noarch 39-0.1 local 9.4 k fedora-repos-rawhide noarch 39-0.1 local 9.0 k file i686 5.44-3.fc39 local 50 k file-libs i686 5.44-3.fc39 local 737 k filesystem i686 3.18-4.fc39 local 1.1 M fonts-srpm-macros noarch 1:2.0.5-11.fc38 local 26 k fpc-srpm-macros noarch 1.3-7.fc38 local 7.8 k gdb-minimal i686 13.1-5.fc39 local 4.5 M gdbm-libs i686 1:1.23-3.fc38 local 60 k ghc-srpm-macros noarch 1.6.1-1.fc38 local 8.0 k glibc i686 2.37.9000-13.fc39 local 1.9 M glibc-common i686 2.37.9000-13.fc39 local 346 k glibc-gconv-extra i686 2.37.9000-13.fc39 local 1.6 M gmp i686 1:6.2.1-4.fc38 local 305 k gnat-srpm-macros noarch 6-2.fc38 local 8.8 k go-srpm-macros noarch 3.2.0-3.fc39 local 27 k jansson i686 2.13.1-6.fc38 local 46 k kernel-srpm-macros noarch 1.0-18.fc39 local 9.4 k keyutils-libs i686 1.6.1-6.fc38 local 32 k krb5-libs i686 1.20.1-9.fc39 local 766 k libacl i686 2.3.1-7.fc39 local 25 k libarchive i686 3.6.1-5.fc39 local 442 k libattr i686 2.5.1-7.fc39 local 18 k libblkid i686 2.39-4.fc39 local 128 k libbrotli i686 1.0.9-11.fc38 local 318 k libcap i686 2.48-6.fc38 local 69 k libcap-ng i686 0.8.3-5.fc38 local 33 k libcom_err i686 1.47.0-1.fc39 local 26 k libcurl i686 8.1.2-1.fc39 local 347 k libdb i686 5.3.28-55.fc38 local 822 k libeconf i686 0.4.0-5.fc38 local 29 k libevent i686 2.1.12-8.fc38 local 277 k libfdisk i686 2.39-4.fc39 local 176 k libffi i686 3.4.4-2.fc38 local 36 k libgcc i686 13.1.1-2.fc39 local 115 k libgomp i686 13.1.1-2.fc39 local 319 k libidn2 i686 2.3.4-2.fc38 local 154 k libmount i686 2.39-4.fc39 local 161 k libnghttp2 i686 1.54.0-1.fc39 local 81 k libnsl2 i686 2.0.0-5.fc38 local 31 k libpkgconf i686 1.9.4-2.fc39 local 41 k libpsl i686 0.21.2-2.fc38 local 66 k libpwquality i686 1.4.5-3.fc38 local 108 k libselinux i686 3.5-1.fc39 local 92 k libsemanage i686 3.5-2.fc39 local 129 k libsepol i686 3.5-1.fc39 local 337 k libsigsegv i686 2.14-4.fc38 local 27 k libsmartcols i686 2.39-4.fc39 local 69 k libssh i686 0.10.5-1.fc39 local 226 k libssh-config noarch 0.10.5-1.fc39 local 9.0 k libstdc++ i686 13.1.1-2.fc39 local 928 k libtasn1 i686 4.19.0-2.fc38 local 75 k libtirpc i686 1.3.3-1.rc1.fc39 local 101 k libunistring1.0 i686 1.0-1.fc38 local 547 k libutempter i686 1.2.1-9.fc39 local 26 k libuuid i686 2.39-4.fc39 local 29 k libverto i686 0.3.2-5.fc38 local 21 k libxcrypt i686 4.4.35-1.fc39 local 123 k libxml2 i686 2.10.4-1.fc39 local 744 k libzstd i686 1.5.5-1.fc39 local 290 k lua-libs i686 5.4.4-9.fc39 local 149 k lua-srpm-macros noarch 1-8.fc38 local 8.6 k lz4-libs i686 1.9.4-3.fc39 local 70 k mpfr i686 4.1.1-3.fc38 local 636 k ncurses-base noarch 6.4-4.20230520.fc39 local 62 k ncurses-libs i686 6.4-4.20230520.fc39 local 355 k ocaml-srpm-macros noarch 7-3.fc38 local 13 k openblas-srpm-macros noarch 2-13.fc38 local 7.5 k openldap i686 2.6.4-2.fc39 local 273 k openssl-libs i686 1:3.0.8-2.fc39 local 2.1 M p11-kit i686 0.24.1-6.fc38 local 325 k p11-kit-trust i686 0.24.1-6.fc38 local 134 k package-notes-srpm-macros noarch 0.5-8.fc39 local 11 k pam i686 1.5.3-1.fc39 local 527 k pam-libs i686 1.5.3-1.fc39 local 60 k pcre2 i686 10.42-1.fc38.1 local 232 k pcre2-syntax noarch 10.42-1.fc38.1 local 144 k perl-srpm-macros noarch 1-48.fc38 local 8.4 k pkgconf i686 1.9.4-2.fc39 local 43 k pkgconf-m4 noarch 1.9.4-2.fc39 local 14 k pkgconf-pkg-config i686 1.9.4-2.fc39 local 9.5 k popt i686 1.19-2.fc38 local 62 k publicsuffix-list-dafsa noarch 20230318-1.fc39 local 60 k pyproject-srpm-macros noarch 1.9.0-1.fc39 local 15 k python-srpm-macros noarch 3.11-10.fc39 local 26 k qt5-srpm-macros noarch 5.15.9-1.fc39 local 8.1 k readline i686 8.2-3.fc38 local 218 k rpm i686 4.18.91-1.fc39 local 499 k rpm-build-libs i686 4.18.91-1.fc39 local 101 k rpm-libs i686 4.18.91-1.fc39 local 339 k rpm-sequoia i686 1.4.0-3.fc39 local 921 k rpmautospec-rpm-macros noarch 0.3.5-2.fc39 local 8.9 k rust-srpm-macros noarch 24-2.fc39 local 12 k setup noarch 2.14.3-3.fc39 local 146 k sqlite-libs i686 3.41.2-2.fc39 local 706 k systemd-libs i686 253.5-1.fc39 local 688 k tzdata noarch 2023c-1.fc39 local 433 k util-linux-core i686 2.39-4.fc39 local 490 k xxhash-libs i686 0.8.1-4.fc38 local 54 k xz-libs i686 5.4.3-1.fc39 local 118 k zip i686 3.0-36.fc38 local 267 k zlib i686 1.2.13-3.fc38 local 93 k zstd i686 1.5.5-1.fc39 local 451 k Installing Groups: build Transaction Summary ================================================================================ Install 152 Packages Total download size: 53 M Installed size: 177 M Downloading Packages: (1/152): alternatives-1.24-1.fc39.i686.rpm 599 kB/s | 40 kB 00:00 (2/152): ansible-srpm-macros-1-10.fc39.noarch.r 305 kB/s | 21 kB 00:00 (3/152): authselect-1.4.2-2.fc38.i686.rpm 6.8 MB/s | 141 kB 00:00 (4/152): authselect-libs-1.4.2-2.fc38.i686.rpm 8.4 MB/s | 239 kB 00:00 (5/152): basesystem-11-17.fc39.noarch.rpm 423 kB/s | 7.0 kB 00:00 (6/152): bash-5.2.15-3.fc38.i686.rpm 41 MB/s | 1.8 MB 00:00 (7/152): binutils-gold-2.40-9.fc39.i686.rpm 26 MB/s | 864 kB 00:00 (8/152): bzip2-1.0.8-13.fc38.i686.rpm 4.2 MB/s | 53 kB 00:00 (9/152): bzip2-libs-1.0.8-13.fc38.i686.rpm 3.6 MB/s | 42 kB 00:00 (10/152): ca-certificates-2023.2.60-2.fc38.noar 25 MB/s | 845 kB 00:00 (11/152): coreutils-9.3-1.fc39.i686.rpm 40 MB/s | 1.1 MB 00:00 (12/152): audit-libs-3.1.1-1.fc39.i686.rpm 475 kB/s | 124 kB 00:00 (13/152): binutils-2.40-9.fc39.i686.rpm 36 MB/s | 5.8 MB 00:00 (14/152): cpio-2.14-2.fc39.i686.rpm 11 MB/s | 277 kB 00:00 (15/152): cracklib-2.9.7-31.fc38.i686.rpm 3.5 MB/s | 81 kB 00:00 (16/152): crypto-policies-20230420-1.git3d08ae7 4.5 MB/s | 65 kB 00:00 (17/152): coreutils-common-9.3-1.fc39.i686.rpm 42 MB/s | 2.1 MB 00:00 (18/152): debugedit-5.0-7.fc38.i686.rpm 6.2 MB/s | 79 kB 00:00 (19/152): cyrus-sasl-lib-2.1.28-10.fc39.i686.rp 28 MB/s | 856 kB 00:00 (20/152): diffutils-3.9-4.fc39.i686.rpm 25 MB/s | 393 kB 00:00 (21/152): dwz-0.15-2.fc38.i686.rpm 11 MB/s | 139 kB 00:00 (22/152): ed-1.19-2.fc38.i686.rpm 6.3 MB/s | 78 kB 00:00 (23/152): curl-8.1.2-1.fc39.i686.rpm 5.5 MB/s | 347 kB 00:00 (24/152): efi-srpm-macros-5-8.fc39.noarch.rpm 1.5 MB/s | 22 kB 00:00 (25/152): elfutils-default-yama-scope-0.189-2.f 1.2 MB/s | 15 kB 00:00 (26/152): elfutils-0.189-2.fc39.i686.rpm 23 MB/s | 551 kB 00:00 (27/152): elfutils-libelf-0.189-2.fc39.i686.rpm 15 MB/s | 203 kB 00:00 (28/152): elfutils-libs-0.189-2.fc39.i686.rpm 22 MB/s | 290 kB 00:00 (29/152): fedora-gpg-keys-39-0.1.noarch.rpm 8.9 MB/s | 116 kB 00:00 (30/152): fedora-release-39-0.14.noarch.rpm 613 kB/s | 6.6 kB 00:00 (31/152): fedora-release-common-39-0.14.noarch. 1.6 MB/s | 17 kB 00:00 (32/152): elfutils-debuginfod-client-0.189-2.fc 728 kB/s | 40 kB 00:00 (33/152): fedora-release-identity-basic-39-0.14 770 kB/s | 7.4 kB 00:00 (34/152): fedora-repos-39-0.1.noarch.rpm 894 kB/s | 9.4 kB 00:00 (35/152): fedora-repos-rawhide-39-0.1.noarch.rp 818 kB/s | 9.0 kB 00:00 (36/152): file-libs-5.44-3.fc39.i686.rpm 25 MB/s | 737 kB 00:00 (37/152): file-5.44-3.fc39.i686.rpm 999 kB/s | 50 kB 00:00 (38/152): findutils-4.9.0-4.fc39.i686.rpm 22 MB/s | 493 kB 00:00 (39/152): filesystem-3.18-4.fc39.i686.rpm 21 MB/s | 1.1 MB 00:00 (40/152): fpc-srpm-macros-1.3-7.fc38.noarch.rpm 855 kB/s | 7.8 kB 00:00 (41/152): fonts-srpm-macros-2.0.5-11.fc38.noarc 793 kB/s | 26 kB 00:00 (42/152): gawk-5.2.2-1.fc39.i686.rpm 32 MB/s | 1.0 MB 00:00 (43/152): gdbm-libs-1.23-3.fc38.i686.rpm 4.2 MB/s | 60 kB 00:00 (44/152): ghc-srpm-macros-1.6.1-1.fc38.noarch.r 867 kB/s | 8.0 kB 00:00 (45/152): glibc-common-2.37.9000-13.fc39.i686.r 13 MB/s | 346 kB 00:00 (46/152): glibc-gconv-extra-2.37.9000-13.fc39.i 34 MB/s | 1.6 MB 00:00 (47/152): gdb-minimal-13.1-5.fc39.i686.rpm 38 MB/s | 4.5 MB 00:00 (48/152): glibc-minimal-langpack-2.37.9000-13.f 3.4 MB/s | 59 kB 00:00 (49/152): gnat-srpm-macros-6-2.fc38.noarch.rpm 584 kB/s | 8.8 kB 00:00 (50/152): gmp-6.2.1-4.fc38.i686.rpm 10 MB/s | 305 kB 00:00 (51/152): go-srpm-macros-3.2.0-3.fc39.noarch.rp 2.8 MB/s | 27 kB 00:00 (52/152): gzip-1.12-3.fc38.i686.rpm 11 MB/s | 157 kB 00:00 (53/152): grep-3.11-1.fc39.i686.rpm 13 MB/s | 294 kB 00:00 (54/152): jansson-2.13.1-6.fc38.i686.rpm 3.8 MB/s | 46 kB 00:00 (55/152): info-7.0.3-2.fc39.i686.rpm 13 MB/s | 183 kB 00:00 (56/152): keyutils-libs-1.6.1-6.fc38.i686.rpm 2.6 MB/s | 32 kB 00:00 (57/152): kernel-srpm-macros-1.0-18.fc39.noarch 524 kB/s | 9.4 kB 00:00 (58/152): libacl-2.3.1-7.fc39.i686.rpm 1.4 MB/s | 25 kB 00:00 (59/152): glibc-2.37.9000-13.fc39.i686.rpm 9.3 MB/s | 1.9 MB 00:00 (60/152): krb5-libs-1.20.1-9.fc39.i686.rpm 18 MB/s | 766 kB 00:00 (61/152): libarchive-3.6.1-5.fc39.i686.rpm 15 MB/s | 442 kB 00:00 (62/152): libattr-2.5.1-7.fc39.i686.rpm 1.5 MB/s | 18 kB 00:00 (63/152): libcap-2.48-6.fc38.i686.rpm 5.8 MB/s | 69 kB 00:00 (64/152): libblkid-2.39-4.fc39.i686.rpm 3.9 MB/s | 128 kB 00:00 (65/152): libbrotli-1.0.9-11.fc38.i686.rpm 13 MB/s | 318 kB 00:00 (66/152): libcap-ng-0.8.3-5.fc38.i686.rpm 2.4 MB/s | 33 kB 00:00 (67/152): libcurl-8.1.2-1.fc39.i686.rpm 18 MB/s | 347 kB 00:00 (68/152): libcom_err-1.47.0-1.fc39.i686.rpm 1.1 MB/s | 26 kB 00:00 (69/152): libeconf-0.4.0-5.fc38.i686.rpm 2.2 MB/s | 29 kB 00:00 (70/152): libdb-5.3.28-55.fc38.i686.rpm 22 MB/s | 822 kB 00:00 (71/152): libfdisk-2.39-4.fc39.i686.rpm 13 MB/s | 176 kB 00:00 (72/152): libevent-2.1.12-8.fc38.i686.rpm 10 MB/s | 277 kB 00:00 (73/152): libffi-3.4.4-2.fc38.i686.rpm 1.9 MB/s | 36 kB 00:00 (74/152): libgcc-13.1.1-2.fc39.i686.rpm 6.0 MB/s | 115 kB 00:00 (75/152): libidn2-2.3.4-2.fc38.i686.rpm 11 MB/s | 154 kB 00:00 (76/152): libmount-2.39-4.fc39.i686.rpm 13 MB/s | 161 kB 00:00 (77/152): libnghttp2-1.54.0-1.fc39.i686.rpm 4.9 MB/s | 81 kB 00:00 (78/152): libnsl2-2.0.0-5.fc38.i686.rpm 2.6 MB/s | 31 kB 00:00 (79/152): libpkgconf-1.9.4-2.fc39.i686.rpm 3.6 MB/s | 41 kB 00:00 (80/152): libgomp-13.1.1-2.fc39.i686.rpm 5.7 MB/s | 319 kB 00:00 (81/152): libpsl-0.21.2-2.fc38.i686.rpm 3.4 MB/s | 66 kB 00:00 (82/152): libpwquality-1.4.5-3.fc38.i686.rpm 8.3 MB/s | 108 kB 00:00 (83/152): libsemanage-3.5-2.fc39.i686.rpm 9.7 MB/s | 129 kB 00:00 (84/152): libselinux-3.5-1.fc39.i686.rpm 3.3 MB/s | 92 kB 00:00 (85/152): libsepol-3.5-1.fc39.i686.rpm 16 MB/s | 337 kB 00:00 (86/152): libsigsegv-2.14-4.fc38.i686.rpm 2.3 MB/s | 27 kB 00:00 (87/152): libssh-0.10.5-1.fc39.i686.rpm 16 MB/s | 226 kB 00:00 (88/152): libssh-config-0.10.5-1.fc39.noarch.rp 760 kB/s | 9.0 kB 00:00 (89/152): libsmartcols-2.39-4.fc39.i686.rpm 3.5 MB/s | 69 kB 00:00 (90/152): libtasn1-4.19.0-2.fc38.i686.rpm 5.9 MB/s | 75 kB 00:00 (91/152): libtirpc-1.3.3-1.rc1.fc39.i686.rpm 5.7 MB/s | 101 kB 00:00 (92/152): libunistring1.0-1.0-1.fc38.i686.rpm 24 MB/s | 547 kB 00:00 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00:00 (123/152): publicsuffix-list-dafsa-20230318-1.f 2.9 MB/s | 60 kB 00:00 (124/152): python-srpm-macros-3.11-10.fc39.noar 2.4 MB/s | 26 kB 00:00 (125/152): pyproject-srpm-macros-1.9.0-1.fc39.n 772 kB/s | 15 kB 00:00 (126/152): readline-8.2-3.fc38.i686.rpm 15 MB/s | 218 kB 00:00 (127/152): qt5-srpm-macros-5.15.9-1.fc39.noarch 549 kB/s | 8.1 kB 00:00 (128/152): redhat-rpm-config-254-1.fc39.noarch. 3.2 MB/s | 76 kB 00:00 (129/152): rpm-build-4.18.91-1.fc39.i686.rpm 5.9 MB/s | 69 kB 00:00 (130/152): rpm-4.18.91-1.fc39.i686.rpm 17 MB/s | 499 kB 00:00 (131/152): rpm-libs-4.18.91-1.fc39.i686.rpm 16 MB/s | 339 kB 00:00 (132/152): rpm-build-libs-4.18.91-1.fc39.i686.r 3.6 MB/s | 101 kB 00:00 (133/152): rpmautospec-rpm-macros-0.3.5-2.fc39. 893 kB/s | 8.9 kB 00:00 (134/152): rust-srpm-macros-24-2.fc39.noarch.rp 635 kB/s | 12 kB 00:00 (135/152): sed-4.8-12.fc38.i686.rpm 16 MB/s | 300 kB 00:00 (136/152): rpm-sequoia-1.4.0-3.fc39.i686.rpm 24 MB/s | 921 kB 00:00 (137/152): setup-2.14.3-3.fc39.noarch.rpm 5.5 MB/s | 146 kB 00:00 (138/152): sqlite-libs-3.41.2-2.fc39.i686.rpm 23 MB/s | 706 kB 00:00 (139/152): shadow-utils-4.13-7.fc39.i686.rpm 30 MB/s | 1.2 MB 00:00 (140/152): tzdata-2023c-1.fc39.noarch.rpm 19 MB/s | 433 kB 00:00 (141/152): tar-1.34-8.fc39.i686.rpm 22 MB/s | 895 kB 00:00 (142/152): unzip-6.0-60.fc38.i686.rpm 13 MB/s | 179 kB 00:00 (143/152): systemd-libs-253.5-1.fc39.i686.rpm 12 MB/s | 688 kB 00:00 (144/152): util-linux-core-2.39-4.fc39.i686.rpm 17 MB/s | 490 kB 00:00 (145/152): which-2.21-39.fc39.i686.rpm 1.5 MB/s | 42 kB 00:00 (146/152): xxhash-libs-0.8.1-4.fc38.i686.rpm 3.8 MB/s | 54 kB 00:00 (147/152): util-linux-2.39-4.fc39.i686.rpm 22 MB/s | 1.2 MB 00:00 (148/152): xz-libs-5.4.3-1.fc39.i686.rpm 9.1 MB/s | 118 kB 00:00 (149/152): zlib-1.2.13-3.fc38.i686.rpm 7.3 MB/s | 93 kB 00:00 (150/152): zip-3.0-36.fc38.i686.rpm 12 MB/s | 267 kB 00:00 (151/152): xz-5.4.3-1.fc39.i686.rpm 11 MB/s | 533 kB 00:00 (152/152): zstd-1.5.5-1.fc39.i686.rpm 12 MB/s | 451 kB 00:00 -------------------------------------------------------------------------------- Total 37 MB/s | 53 MB 00:01 Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Running scriptlet: filesystem-3.18-4.fc39.i686 1/1 Preparing : 1/1 Installing : crypto-policies-20230420-1.git3d08ae7.fc39.noarc 1/152 Running scriptlet: crypto-policies-20230420-1.git3d08ae7.fc39.noarc 1/152 Installing : tzdata-2023c-1.fc39.noarch 2/152 Installing : fedora-release-identity-basic-39-0.14.noarch 3/152 Installing : rust-srpm-macros-24-2.fc39.noarch 4/152 Installing : qt5-srpm-macros-5.15.9-1.fc39.noarch 5/152 Installing : pyproject-srpm-macros-1.9.0-1.fc39.noarch 6/152 Installing : publicsuffix-list-dafsa-20230318-1.fc39.noarch 7/152 Installing : pkgconf-m4-1.9.4-2.fc39.noarch 8/152 Installing : perl-srpm-macros-1-48.fc38.noarch 9/152 Installing : pcre2-syntax-10.42-1.fc38.1.noarch 10/152 Installing : package-notes-srpm-macros-0.5-8.fc39.noarch 11/152 Installing : openblas-srpm-macros-2-13.fc38.noarch 12/152 Installing : ocaml-srpm-macros-7-3.fc38.noarch 13/152 Installing : ncurses-base-6.4-4.20230520.fc39.noarch 14/152 Installing : 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138/152 Installing : efi-srpm-macros-5-8.fc39.noarch 139/152 Installing : lua-srpm-macros-1-8.fc38.noarch 140/152 Installing : rpmautospec-rpm-macros-0.3.5-2.fc39.noarch 141/152 Installing : fonts-srpm-macros-1:2.0.5-11.fc38.noarch 142/152 Installing : go-srpm-macros-3.2.0-3.fc39.noarch 143/152 Installing : python-srpm-macros-3.11-10.fc39.noarch 144/152 Installing : redhat-rpm-config-254-1.fc39.noarch 145/152 Installing : xxhash-libs-0.8.1-4.fc38.i686 146/152 Installing : gdb-minimal-13.1-5.fc39.i686 147/152 Installing : debugedit-5.0-7.fc38.i686 148/152 Installing : rpm-build-4.18.91-1.fc39.i686 149/152 Installing : util-linux-2.39-4.fc39.i686 150/152 Installing : which-2.21-39.fc39.i686 151/152 Installing : info-7.0.3-2.fc39.i686 152/152 Running scriptlet: filesystem-3.18-4.fc39.i686 152/152 Running scriptlet: ca-certificates-2023.2.60-2.fc38.noarch 152/152 Running scriptlet: authselect-libs-1.4.2-2.fc38.i686 152/152 Running scriptlet: rpm-4.18.91-1.fc39.i686 152/152 Running scriptlet: info-7.0.3-2.fc39.i686 152/152 Verifying : alternatives-1.24-1.fc39.i686 1/152 Verifying : ansible-srpm-macros-1-10.fc39.noarch 2/152 Verifying : audit-libs-3.1.1-1.fc39.i686 3/152 Verifying : authselect-1.4.2-2.fc38.i686 4/152 Verifying : authselect-libs-1.4.2-2.fc38.i686 5/152 Verifying : basesystem-11-17.fc39.noarch 6/152 Verifying : bash-5.2.15-3.fc38.i686 7/152 Verifying : binutils-2.40-9.fc39.i686 8/152 Verifying : binutils-gold-2.40-9.fc39.i686 9/152 Verifying : bzip2-1.0.8-13.fc38.i686 10/152 Verifying : bzip2-libs-1.0.8-13.fc38.i686 11/152 Verifying : ca-certificates-2023.2.60-2.fc38.noarch 12/152 Verifying : coreutils-9.3-1.fc39.i686 13/152 Verifying : coreutils-common-9.3-1.fc39.i686 14/152 Verifying : cpio-2.14-2.fc39.i686 15/152 Verifying : cracklib-2.9.7-31.fc38.i686 16/152 Verifying : crypto-policies-20230420-1.git3d08ae7.fc39.noarc 17/152 Verifying : curl-8.1.2-1.fc39.i686 18/152 Verifying : cyrus-sasl-lib-2.1.28-10.fc39.i686 19/152 Verifying : debugedit-5.0-7.fc38.i686 20/152 Verifying : diffutils-3.9-4.fc39.i686 21/152 Verifying : dwz-0.15-2.fc38.i686 22/152 Verifying : ed-1.19-2.fc38.i686 23/152 Verifying : efi-srpm-macros-5-8.fc39.noarch 24/152 Verifying : elfutils-0.189-2.fc39.i686 25/152 Verifying : elfutils-debuginfod-client-0.189-2.fc39.i686 26/152 Verifying : elfutils-default-yama-scope-0.189-2.fc39.noarch 27/152 Verifying : elfutils-libelf-0.189-2.fc39.i686 28/152 Verifying : elfutils-libs-0.189-2.fc39.i686 29/152 Verifying : fedora-gpg-keys-39-0.1.noarch 30/152 Verifying : fedora-release-39-0.14.noarch 31/152 Verifying : fedora-release-common-39-0.14.noarch 32/152 Verifying : fedora-release-identity-basic-39-0.14.noarch 33/152 Verifying : fedora-repos-39-0.1.noarch 34/152 Verifying : fedora-repos-rawhide-39-0.1.noarch 35/152 Verifying : file-5.44-3.fc39.i686 36/152 Verifying : file-libs-5.44-3.fc39.i686 37/152 Verifying : filesystem-3.18-4.fc39.i686 38/152 Verifying : findutils-1:4.9.0-4.fc39.i686 39/152 Verifying : fonts-srpm-macros-1:2.0.5-11.fc38.noarch 40/152 Verifying : fpc-srpm-macros-1.3-7.fc38.noarch 41/152 Verifying : gawk-5.2.2-1.fc39.i686 42/152 Verifying : gdb-minimal-13.1-5.fc39.i686 43/152 Verifying : gdbm-libs-1:1.23-3.fc38.i686 44/152 Verifying : ghc-srpm-macros-1.6.1-1.fc38.noarch 45/152 Verifying : glibc-2.37.9000-13.fc39.i686 46/152 Verifying : glibc-common-2.37.9000-13.fc39.i686 47/152 Verifying : glibc-gconv-extra-2.37.9000-13.fc39.i686 48/152 Verifying : glibc-minimal-langpack-2.37.9000-13.fc39.i686 49/152 Verifying : gmp-1:6.2.1-4.fc38.i686 50/152 Verifying : gnat-srpm-macros-6-2.fc38.noarch 51/152 Verifying : go-srpm-macros-3.2.0-3.fc39.noarch 52/152 Verifying : grep-3.11-1.fc39.i686 53/152 Verifying : gzip-1.12-3.fc38.i686 54/152 Verifying : info-7.0.3-2.fc39.i686 55/152 Verifying : jansson-2.13.1-6.fc38.i686 56/152 Verifying : kernel-srpm-macros-1.0-18.fc39.noarch 57/152 Verifying : keyutils-libs-1.6.1-6.fc38.i686 58/152 Verifying : krb5-libs-1.20.1-9.fc39.i686 59/152 Verifying : libacl-2.3.1-7.fc39.i686 60/152 Verifying : libarchive-3.6.1-5.fc39.i686 61/152 Verifying : libattr-2.5.1-7.fc39.i686 62/152 Verifying : libblkid-2.39-4.fc39.i686 63/152 Verifying : libbrotli-1.0.9-11.fc38.i686 64/152 Verifying : libcap-2.48-6.fc38.i686 65/152 Verifying : libcap-ng-0.8.3-5.fc38.i686 66/152 Verifying : libcom_err-1.47.0-1.fc39.i686 67/152 Verifying : libcurl-8.1.2-1.fc39.i686 68/152 Verifying : libdb-5.3.28-55.fc38.i686 69/152 Verifying : libeconf-0.4.0-5.fc38.i686 70/152 Verifying : libevent-2.1.12-8.fc38.i686 71/152 Verifying : libfdisk-2.39-4.fc39.i686 72/152 Verifying : libffi-3.4.4-2.fc38.i686 73/152 Verifying : libgcc-13.1.1-2.fc39.i686 74/152 Verifying : libgomp-13.1.1-2.fc39.i686 75/152 Verifying : libidn2-2.3.4-2.fc38.i686 76/152 Verifying : libmount-2.39-4.fc39.i686 77/152 Verifying : libnghttp2-1.54.0-1.fc39.i686 78/152 Verifying : libnsl2-2.0.0-5.fc38.i686 79/152 Verifying : libpkgconf-1.9.4-2.fc39.i686 80/152 Verifying : libpsl-0.21.2-2.fc38.i686 81/152 Verifying : libpwquality-1.4.5-3.fc38.i686 82/152 Verifying : libselinux-3.5-1.fc39.i686 83/152 Verifying : libsemanage-3.5-2.fc39.i686 84/152 Verifying : libsepol-3.5-1.fc39.i686 85/152 Verifying : libsigsegv-2.14-4.fc38.i686 86/152 Verifying : libsmartcols-2.39-4.fc39.i686 87/152 Verifying : libssh-0.10.5-1.fc39.i686 88/152 Verifying : libssh-config-0.10.5-1.fc39.noarch 89/152 Verifying : libstdc++-13.1.1-2.fc39.i686 90/152 Verifying : libtasn1-4.19.0-2.fc38.i686 91/152 Verifying : libtirpc-1.3.3-1.rc1.fc39.i686 92/152 Verifying : libunistring1.0-1.0-1.fc38.i686 93/152 Verifying : libutempter-1.2.1-9.fc39.i686 94/152 Verifying : libuuid-2.39-4.fc39.i686 95/152 Verifying : libverto-0.3.2-5.fc38.i686 96/152 Verifying : libxcrypt-4.4.35-1.fc39.i686 97/152 Verifying : libxml2-2.10.4-1.fc39.i686 98/152 Verifying : libzstd-1.5.5-1.fc39.i686 99/152 Verifying : lua-libs-5.4.4-9.fc39.i686 100/152 Verifying : lua-srpm-macros-1-8.fc38.noarch 101/152 Verifying : lz4-libs-1.9.4-3.fc39.i686 102/152 Verifying : mpfr-4.1.1-3.fc38.i686 103/152 Verifying : ncurses-base-6.4-4.20230520.fc39.noarch 104/152 Verifying : ncurses-libs-6.4-4.20230520.fc39.i686 105/152 Verifying : ocaml-srpm-macros-7-3.fc38.noarch 106/152 Verifying : openblas-srpm-macros-2-13.fc38.noarch 107/152 Verifying : openldap-2.6.4-2.fc39.i686 108/152 Verifying : openssl-libs-1:3.0.8-2.fc39.i686 109/152 Verifying : p11-kit-0.24.1-6.fc38.i686 110/152 Verifying : p11-kit-trust-0.24.1-6.fc38.i686 111/152 Verifying : package-notes-srpm-macros-0.5-8.fc39.noarch 112/152 Verifying : pam-1.5.3-1.fc39.i686 113/152 Verifying : pam-libs-1.5.3-1.fc39.i686 114/152 Verifying : patch-2.7.6-21.fc39.i686 115/152 Verifying : pcre2-10.42-1.fc38.1.i686 116/152 Verifying : pcre2-syntax-10.42-1.fc38.1.noarch 117/152 Verifying : perl-srpm-macros-1-48.fc38.noarch 118/152 Verifying : pkgconf-1.9.4-2.fc39.i686 119/152 Verifying : pkgconf-m4-1.9.4-2.fc39.noarch 120/152 Verifying : pkgconf-pkg-config-1.9.4-2.fc39.i686 121/152 Verifying : popt-1.19-2.fc38.i686 122/152 Verifying : publicsuffix-list-dafsa-20230318-1.fc39.noarch 123/152 Verifying : pyproject-srpm-macros-1.9.0-1.fc39.noarch 124/152 Verifying : python-srpm-macros-3.11-10.fc39.noarch 125/152 Verifying : qt5-srpm-macros-5.15.9-1.fc39.noarch 126/152 Verifying : readline-8.2-3.fc38.i686 127/152 Verifying : redhat-rpm-config-254-1.fc39.noarch 128/152 Verifying : rpm-4.18.91-1.fc39.i686 129/152 Verifying : rpm-build-4.18.91-1.fc39.i686 130/152 Verifying : rpm-build-libs-4.18.91-1.fc39.i686 131/152 Verifying : rpm-libs-4.18.91-1.fc39.i686 132/152 Verifying : rpm-sequoia-1.4.0-3.fc39.i686 133/152 Verifying : rpmautospec-rpm-macros-0.3.5-2.fc39.noarch 134/152 Verifying : rust-srpm-macros-24-2.fc39.noarch 135/152 Verifying : sed-4.8-12.fc38.i686 136/152 Verifying : setup-2.14.3-3.fc39.noarch 137/152 Verifying : shadow-utils-2:4.13-7.fc39.i686 138/152 Verifying : sqlite-libs-3.41.2-2.fc39.i686 139/152 Verifying : systemd-libs-253.5-1.fc39.i686 140/152 Verifying : tar-2:1.34-8.fc39.i686 141/152 Verifying : tzdata-2023c-1.fc39.noarch 142/152 Verifying : unzip-6.0-60.fc38.i686 143/152 Verifying : util-linux-2.39-4.fc39.i686 144/152 Verifying : util-linux-core-2.39-4.fc39.i686 145/152 Verifying : which-2.21-39.fc39.i686 146/152 Verifying : xxhash-libs-0.8.1-4.fc38.i686 147/152 Verifying : xz-5.4.3-1.fc39.i686 148/152 Verifying : xz-libs-5.4.3-1.fc39.i686 149/152 Verifying : zip-3.0-36.fc38.i686 150/152 Verifying : zlib-1.2.13-3.fc38.i686 151/152 Verifying : zstd-1.5.5-1.fc39.i686 152/152 Installed products updated. Installed: alternatives-1.24-1.fc39.i686 ansible-srpm-macros-1-10.fc39.noarch audit-libs-3.1.1-1.fc39.i686 authselect-1.4.2-2.fc38.i686 authselect-libs-1.4.2-2.fc38.i686 basesystem-11-17.fc39.noarch bash-5.2.15-3.fc38.i686 binutils-2.40-9.fc39.i686 binutils-gold-2.40-9.fc39.i686 bzip2-1.0.8-13.fc38.i686 bzip2-libs-1.0.8-13.fc38.i686 ca-certificates-2023.2.60-2.fc38.noarch coreutils-9.3-1.fc39.i686 coreutils-common-9.3-1.fc39.i686 cpio-2.14-2.fc39.i686 cracklib-2.9.7-31.fc38.i686 crypto-policies-20230420-1.git3d08ae7.fc39.noarch curl-8.1.2-1.fc39.i686 cyrus-sasl-lib-2.1.28-10.fc39.i686 debugedit-5.0-7.fc38.i686 diffutils-3.9-4.fc39.i686 dwz-0.15-2.fc38.i686 ed-1.19-2.fc38.i686 efi-srpm-macros-5-8.fc39.noarch elfutils-0.189-2.fc39.i686 elfutils-debuginfod-client-0.189-2.fc39.i686 elfutils-default-yama-scope-0.189-2.fc39.noarch elfutils-libelf-0.189-2.fc39.i686 elfutils-libs-0.189-2.fc39.i686 fedora-gpg-keys-39-0.1.noarch fedora-release-39-0.14.noarch fedora-release-common-39-0.14.noarch fedora-release-identity-basic-39-0.14.noarch fedora-repos-39-0.1.noarch fedora-repos-rawhide-39-0.1.noarch file-5.44-3.fc39.i686 file-libs-5.44-3.fc39.i686 filesystem-3.18-4.fc39.i686 findutils-1:4.9.0-4.fc39.i686 fonts-srpm-macros-1:2.0.5-11.fc38.noarch fpc-srpm-macros-1.3-7.fc38.noarch gawk-5.2.2-1.fc39.i686 gdb-minimal-13.1-5.fc39.i686 gdbm-libs-1:1.23-3.fc38.i686 ghc-srpm-macros-1.6.1-1.fc38.noarch glibc-2.37.9000-13.fc39.i686 glibc-common-2.37.9000-13.fc39.i686 glibc-gconv-extra-2.37.9000-13.fc39.i686 glibc-minimal-langpack-2.37.9000-13.fc39.i686 gmp-1:6.2.1-4.fc38.i686 gnat-srpm-macros-6-2.fc38.noarch go-srpm-macros-3.2.0-3.fc39.noarch grep-3.11-1.fc39.i686 gzip-1.12-3.fc38.i686 info-7.0.3-2.fc39.i686 jansson-2.13.1-6.fc38.i686 kernel-srpm-macros-1.0-18.fc39.noarch keyutils-libs-1.6.1-6.fc38.i686 krb5-libs-1.20.1-9.fc39.i686 libacl-2.3.1-7.fc39.i686 libarchive-3.6.1-5.fc39.i686 libattr-2.5.1-7.fc39.i686 libblkid-2.39-4.fc39.i686 libbrotli-1.0.9-11.fc38.i686 libcap-2.48-6.fc38.i686 libcap-ng-0.8.3-5.fc38.i686 libcom_err-1.47.0-1.fc39.i686 libcurl-8.1.2-1.fc39.i686 libdb-5.3.28-55.fc38.i686 libeconf-0.4.0-5.fc38.i686 libevent-2.1.12-8.fc38.i686 libfdisk-2.39-4.fc39.i686 libffi-3.4.4-2.fc38.i686 libgcc-13.1.1-2.fc39.i686 libgomp-13.1.1-2.fc39.i686 libidn2-2.3.4-2.fc38.i686 libmount-2.39-4.fc39.i686 libnghttp2-1.54.0-1.fc39.i686 libnsl2-2.0.0-5.fc38.i686 libpkgconf-1.9.4-2.fc39.i686 libpsl-0.21.2-2.fc38.i686 libpwquality-1.4.5-3.fc38.i686 libselinux-3.5-1.fc39.i686 libsemanage-3.5-2.fc39.i686 libsepol-3.5-1.fc39.i686 libsigsegv-2.14-4.fc38.i686 libsmartcols-2.39-4.fc39.i686 libssh-0.10.5-1.fc39.i686 libssh-config-0.10.5-1.fc39.noarch libstdc++-13.1.1-2.fc39.i686 libtasn1-4.19.0-2.fc38.i686 libtirpc-1.3.3-1.rc1.fc39.i686 libunistring1.0-1.0-1.fc38.i686 libutempter-1.2.1-9.fc39.i686 libuuid-2.39-4.fc39.i686 libverto-0.3.2-5.fc38.i686 libxcrypt-4.4.35-1.fc39.i686 libxml2-2.10.4-1.fc39.i686 libzstd-1.5.5-1.fc39.i686 lua-libs-5.4.4-9.fc39.i686 lua-srpm-macros-1-8.fc38.noarch lz4-libs-1.9.4-3.fc39.i686 mpfr-4.1.1-3.fc38.i686 ncurses-base-6.4-4.20230520.fc39.noarch ncurses-libs-6.4-4.20230520.fc39.i686 ocaml-srpm-macros-7-3.fc38.noarch openblas-srpm-macros-2-13.fc38.noarch openldap-2.6.4-2.fc39.i686 openssl-libs-1:3.0.8-2.fc39.i686 p11-kit-0.24.1-6.fc38.i686 p11-kit-trust-0.24.1-6.fc38.i686 package-notes-srpm-macros-0.5-8.fc39.noarch pam-1.5.3-1.fc39.i686 pam-libs-1.5.3-1.fc39.i686 patch-2.7.6-21.fc39.i686 pcre2-10.42-1.fc38.1.i686 pcre2-syntax-10.42-1.fc38.1.noarch perl-srpm-macros-1-48.fc38.noarch pkgconf-1.9.4-2.fc39.i686 pkgconf-m4-1.9.4-2.fc39.noarch pkgconf-pkg-config-1.9.4-2.fc39.i686 popt-1.19-2.fc38.i686 publicsuffix-list-dafsa-20230318-1.fc39.noarch pyproject-srpm-macros-1.9.0-1.fc39.noarch python-srpm-macros-3.11-10.fc39.noarch qt5-srpm-macros-5.15.9-1.fc39.noarch readline-8.2-3.fc38.i686 redhat-rpm-config-254-1.fc39.noarch rpm-4.18.91-1.fc39.i686 rpm-build-4.18.91-1.fc39.i686 rpm-build-libs-4.18.91-1.fc39.i686 rpm-libs-4.18.91-1.fc39.i686 rpm-sequoia-1.4.0-3.fc39.i686 rpmautospec-rpm-macros-0.3.5-2.fc39.noarch rust-srpm-macros-24-2.fc39.noarch sed-4.8-12.fc38.i686 setup-2.14.3-3.fc39.noarch shadow-utils-2:4.13-7.fc39.i686 sqlite-libs-3.41.2-2.fc39.i686 systemd-libs-253.5-1.fc39.i686 tar-2:1.34-8.fc39.i686 tzdata-2023c-1.fc39.noarch unzip-6.0-60.fc38.i686 util-linux-2.39-4.fc39.i686 util-linux-core-2.39-4.fc39.i686 which-2.21-39.fc39.i686 xxhash-libs-0.8.1-4.fc38.i686 xz-5.4.3-1.fc39.i686 xz-libs-5.4.3-1.fc39.i686 zip-3.0-36.fc38.i686 zlib-1.2.13-3.fc38.i686 zstd-1.5.5-1.fc39.i686 Complete! Finish: installing minimal buildroot with dnf Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: glibc-minimal-langpack-2.37.9000-13.fc39.i686 util-linux-2.39-4.fc39.i686 gzip-1.12-3.fc38.i686 libzstd-1.5.5-1.fc39.i686 redhat-rpm-config-254-1.fc39.noarch libutempter-1.2.1-9.fc39.i686 rpm-4.18.91-1.fc39.i686 bzip2-libs-1.0.8-13.fc38.i686 libcap-2.48-6.fc38.i686 debugedit-5.0-7.fc38.i686 util-linux-core-2.39-4.fc39.i686 authselect-libs-1.4.2-2.fc38.i686 rpm-sequoia-1.4.0-3.fc39.i686 unzip-6.0-60.fc38.i686 p11-kit-trust-0.24.1-6.fc38.i686 tar-1.34-8.fc39.i686 libuuid-2.39-4.fc39.i686 bzip2-1.0.8-13.fc38.i686 libverto-0.3.2-5.fc38.i686 ncurses-libs-6.4-4.20230520.fc39.i686 ghc-srpm-macros-1.6.1-1.fc38.noarch ansible-srpm-macros-1-10.fc39.noarch libgcc-13.1.1-2.fc39.i686 shadow-utils-4.13-7.fc39.i686 jansson-2.13.1-6.fc38.i686 rpmautospec-rpm-macros-0.3.5-2.fc39.noarch tzdata-2023c-1.fc39.noarch zlib-1.2.13-3.fc38.i686 libblkid-2.39-4.fc39.i686 grep-3.11-1.fc39.i686 mpfr-4.1.1-3.fc38.i686 libfdisk-2.39-4.fc39.i686 libcurl-8.1.2-1.fc39.i686 qt5-srpm-macros-5.15.9-1.fc39.noarch openssl-libs-3.0.8-2.fc39.i686 file-5.44-3.fc39.i686 libgomp-13.1.1-2.fc39.i686 which-2.21-39.fc39.i686 libssh-0.10.5-1.fc39.i686 libffi-3.4.4-2.fc38.i686 libevent-2.1.12-8.fc38.i686 package-notes-srpm-macros-0.5-8.fc39.noarch dwz-0.15-2.fc38.i686 systemd-libs-253.5-1.fc39.i686 libselinux-3.5-1.fc39.i686 xz-libs-5.4.3-1.fc39.i686 binutils-2.40-9.fc39.i686 coreutils-9.3-1.fc39.i686 ocaml-srpm-macros-7-3.fc38.noarch sqlite-libs-3.41.2-2.fc39.i686 bash-5.2.15-3.fc38.i686 pcre2-syntax-10.42-1.fc38.1.noarch python-srpm-macros-3.11-10.fc39.noarch libacl-2.3.1-7.fc39.i686 popt-1.19-2.fc38.i686 xz-5.4.3-1.fc39.i686 fedora-release-identity-basic-39-0.14.noarch gdbm-libs-1.23-3.fc38.i686 libpsl-0.21.2-2.fc38.i686 libstdc++-13.1.1-2.fc39.i686 libcom_err-1.47.0-1.fc39.i686 elfutils-debuginfod-client-0.189-2.fc39.i686 publicsuffix-list-dafsa-20230318-1.fc39.noarch pyproject-srpm-macros-1.9.0-1.fc39.noarch lua-libs-5.4.4-9.fc39.i686 fedora-release-39-0.14.noarch libmount-2.39-4.fc39.i686 libbrotli-1.0.9-11.fc38.i686 libeconf-0.4.0-5.fc38.i686 fpc-srpm-macros-1.3-7.fc38.noarch libattr-2.5.1-7.fc39.i686 libpwquality-1.4.5-3.fc38.i686 openblas-srpm-macros-2-13.fc38.noarch zstd-1.5.5-1.fc39.i686 elfutils-0.189-2.fc39.i686 fedora-release-common-39-0.14.noarch fedora-repos-39-0.1.noarch xxhash-libs-0.8.1-4.fc38.i686 libsigsegv-2.14-4.fc38.i686 findutils-4.9.0-4.fc39.i686 ncurses-base-6.4-4.20230520.fc39.noarch libsemanage-3.5-2.fc39.i686 zip-3.0-36.fc38.i686 diffutils-3.9-4.fc39.i686 kernel-srpm-macros-1.0-18.fc39.noarch gawk-5.2.2-1.fc39.i686 sed-4.8-12.fc38.i686 pam-1.5.3-1.fc39.i686 libtirpc-1.3.3-1.rc1.fc39.i686 pkgconf-pkg-config-1.9.4-2.fc39.i686 curl-8.1.2-1.fc39.i686 rpm-build-4.18.91-1.fc39.i686 elfutils-default-yama-scope-0.189-2.fc39.noarch libcap-ng-0.8.3-5.fc38.i686 binutils-gold-2.40-9.fc39.i686 readline-8.2-3.fc38.i686 elfutils-libelf-0.189-2.fc39.i686 setup-2.14.3-3.fc39.noarch gnat-srpm-macros-6-2.fc38.noarch openldap-2.6.4-2.fc39.i686 perl-srpm-macros-1-48.fc38.noarch libxcrypt-4.4.35-1.fc39.i686 cpio-2.14-2.fc39.i686 fedora-repos-rawhide-39-0.1.noarch coreutils-common-9.3-1.fc39.i686 patch-2.7.6-21.fc39.i686 elfutils-libs-0.189-2.fc39.i686 fonts-srpm-macros-2.0.5-11.fc38.noarch ed-1.19-2.fc38.i686 libssh-config-0.10.5-1.fc39.noarch libnsl2-2.0.0-5.fc38.i686 libtasn1-4.19.0-2.fc38.i686 file-libs-5.44-3.fc39.i686 lua-srpm-macros-1-8.fc38.noarch gmp-6.2.1-4.fc38.i686 fedora-gpg-keys-39-0.1.noarch gdb-minimal-13.1-5.fc39.i686 alternatives-1.24-1.fc39.i686 glibc-gconv-extra-2.37.9000-13.fc39.i686 pam-libs-1.5.3-1.fc39.i686 cracklib-2.9.7-31.fc38.i686 rpm-build-libs-4.18.91-1.fc39.i686 filesystem-3.18-4.fc39.i686 glibc-common-2.37.9000-13.fc39.i686 ca-certificates-2023.2.60-2.fc38.noarch libarchive-3.6.1-5.fc39.i686 libidn2-2.3.4-2.fc38.i686 libnghttp2-1.54.0-1.fc39.i686 pkgconf-m4-1.9.4-2.fc39.noarch glibc-2.37.9000-13.fc39.i686 libsepol-3.5-1.fc39.i686 basesystem-11-17.fc39.noarch rust-srpm-macros-24-2.fc39.noarch libdb-5.3.28-55.fc38.i686 libxml2-2.10.4-1.fc39.i686 libsmartcols-2.39-4.fc39.i686 p11-kit-0.24.1-6.fc38.i686 libunistring1.0-1.0-1.fc38.i686 crypto-policies-20230420-1.git3d08ae7.fc39.noarch efi-srpm-macros-5-8.fc39.noarch keyutils-libs-1.6.1-6.fc38.i686 lz4-libs-1.9.4-3.fc39.i686 rpm-libs-4.18.91-1.fc39.i686 pkgconf-1.9.4-2.fc39.i686 cyrus-sasl-lib-2.1.28-10.fc39.i686 go-srpm-macros-3.2.0-3.fc39.noarch libpkgconf-1.9.4-2.fc39.i686 audit-libs-3.1.1-1.fc39.i686 krb5-libs-1.20.1-9.fc39.i686 info-7.0.3-2.fc39.i686 pcre2-10.42-1.fc38.1.i686 authselect-1.4.2-2.fc38.i686 Start: buildsrpm Start: rpmbuild -bs warning: %patchN is deprecated (2 usages found), use %patch N (or %patch -P N) Building target platforms: i686 Building for target i686 setting SOURCE_DATE_EPOCH=1674000000 Wrote: /builddir/build/SRPMS/bwa-0.7.17-9.fc39.src.rpm RPM build warnings: %patchN is deprecated (2 usages found), use %patch N (or %patch -P N) Finish: rpmbuild -bs INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-i686-1686591774.156479/root/var/log/dnf.rpm.log /var/lib/mock/fedora-rawhide-i686-1686591774.156479/root/var/log/dnf.librepo.log /var/lib/mock/fedora-rawhide-i686-1686591774.156479/root/var/log/dnf.log Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-67pq1xwj/bwa/bwa.spec) Config(child) 0 minutes 32 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running (timeout=18000): unbuffer mock --rebuild /var/lib/copr-rpmbuild/results/bwa-0.7.17-9.fc39.src.rpm --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1686591774.156479 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 4.1 starting (python version = 3.11.3, NVR = mock-4.1-1.fc38)... Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/results/bwa-0.7.17-9.fc39.src.rpm) Config(fedora-rawhide-i686) Start: clean chroot Finish: clean chroot Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-i686-1686591774.156479/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin Mock Version: 4.1 INFO: Mock Version: 4.1 INFO: Package manager dnf detected and used (fallback) Start: dnf update No matches found for the following disable plugin patterns: local, spacewalk, versionlock Updating Subscription Management repositories. Unable to read consumer identity This system is not registered with an entitlement server. You can use subscription-manager to register. Copr repository 26 kB/s | 1.8 kB 00:00 local 81 kB/s | 3.8 kB 00:00 Dependencies resolved. Nothing to do. Complete! Finish: dnf update Finish: chroot init Start: build phase for bwa-0.7.17-9.fc39.src.rpm Start: build setup for bwa-0.7.17-9.fc39.src.rpm warning: %patchN is deprecated (2 usages found), use %patch N (or %patch -P N) Building target platforms: i686 Building for target i686 setting SOURCE_DATE_EPOCH=1674000000 Wrote: /builddir/build/SRPMS/bwa-0.7.17-9.fc39.src.rpm RPM build warnings: %patchN is deprecated (2 usages found), use %patch N (or %patch -P N) No matches found for the following disable plugin patterns: local, spacewalk, versionlock Updating Subscription Management repositories. Unable to read consumer identity This system is not registered with an entitlement server. You can use subscription-manager to register. Copr repository 39 kB/s | 1.8 kB 00:00 local 81 kB/s | 3.8 kB 00:00 Dependencies resolved. ================================================================================ Package Arch Version Repository Size ================================================================================ Installing: gcc i686 13.1.1-2.fc39 local 34 M make i686 1:4.4.1-1.fc39 local 588 k perl-generators noarch 1.16-2.fc38 local 17 k simde-devel i686 0.7.6-1.gitfefc785.fc39 copr_base 410 k zlib-devel i686 1.2.13-3.fc38 local 45 k Installing dependencies: annobin-docs noarch 12.12-1.fc39 local 95 k annobin-plugin-gcc i686 12.12-1.fc39 local 894 k cpp i686 13.1.1-2.fc39 local 11 M gc i686 8.2.2-3.fc38 local 112 k gcc-plugin-annobin i686 13.1.1-2.fc39 local 44 k glibc-devel i686 2.37.9000-13.fc39 local 70 k glibc-headers-x86 noarch 2.37.9000-13.fc39 local 481 k groff-base i686 1.22.4-11.fc38 local 1.0 M guile22 i686 2.2.7-8.fc39 local 6.5 M hedley-devel i686 15-17.fc39 local 21 k kernel-headers i686 6.4.0-0.rc6.git0.1.fc39 local 1.4 M libasan i686 13.1.1-2.fc39 local 503 k libatomic i686 13.1.1-2.fc39 local 30 k libmpc i686 1.3.1-2.fc38 local 77 k libtool-ltdl i686 2.4.7-6.fc38 local 39 k libubsan i686 13.1.1-2.fc39 local 232 k libunistring i686 1.1-3.fc38 local 552 k libxcrypt-devel i686 4.4.35-1.fc39 local 30 k ncurses i686 6.4-4.20230520.fc39 local 411 k perl-Carp noarch 1.54-1.fc39 local 29 k perl-Class-Struct noarch 0.66-497.fc39 local 23 k perl-DynaLoader i686 1.52-497.fc39 local 27 k perl-Encode i686 4:3.19-493.fc38 local 1.2 M perl-Errno i686 1.36-497.fc39 local 16 k perl-Exporter noarch 5.77-490.fc38 local 31 k perl-Fcntl i686 1.15-497.fc39 local 22 k perl-Fedora-VSP noarch 0.001-31.fc38 local 23 k perl-File-Basename noarch 2.85-497.fc39 local 18 k perl-File-Path noarch 2.18-490.fc38 local 35 k perl-File-Temp noarch 1:0.231.100-490.fc38 local 59 k perl-File-stat noarch 1.12-497.fc39 local 18 k perl-Getopt-Long noarch 1:2.54-2.fc38 local 60 k perl-Getopt-Std noarch 1.13-497.fc39 local 17 k perl-HTTP-Tiny noarch 0.083-1.fc39 local 55 k perl-IO i686 1.50-497.fc39 local 89 k perl-IPC-Open3 noarch 1.22-497.fc39 local 24 k perl-MIME-Base64 i686 3.16-490.fc38 local 30 k perl-POSIX i686 2.03-497.fc39 local 103 k perl-PathTools i686 3.89-1.fc39 local 83 k perl-Pod-Escapes noarch 1:1.07-490.fc38 local 20 k perl-Pod-Perldoc noarch 3.28.01-491.fc38 local 80 k perl-Pod-Simple noarch 1:3.45-2.fc39 local 209 k perl-Pod-Usage noarch 4:2.03-4.fc38 local 40 k perl-Scalar-List-Utils i686 5:1.63-490.fc38 local 75 k perl-SelectSaver noarch 1.02-497.fc39 local 13 k perl-Socket i686 4:2.037-1.fc39 local 56 k perl-Storable i686 1:3.32-1.fc39 local 100 k perl-Symbol noarch 1.09-497.fc39 local 15 k perl-Term-ANSIColor noarch 5.01-491.fc38 local 47 k perl-Term-Cap noarch 1.18-1.fc39 local 22 k perl-Text-ParseWords noarch 3.31-490.fc38 local 16 k perl-Text-Tabs+Wrap noarch 2023.0511-1.fc39 local 22 k perl-Time-Local noarch 2:1.350-1.fc39 local 34 k perl-constant noarch 1.33-492.fc39 local 23 k perl-if noarch 0.61.000-497.fc39 local 15 k perl-interpreter i686 4:5.36.1-497.fc39 local 73 k perl-libs i686 4:5.36.1-497.fc39 local 2.2 M perl-locale noarch 1.10-497.fc39 local 15 k perl-macros noarch 4:5.36.1-497.fc39 local 13 k perl-mro i686 1.26-497.fc39 local 31 k perl-overload noarch 1.35-497.fc39 local 47 k perl-overloading noarch 0.02-497.fc39 local 14 k perl-parent noarch 1:0.241-1.fc39 local 14 k perl-podlators noarch 1:5.01-2.fc38 local 121 k perl-vars noarch 1.05-497.fc39 local 14 k Transaction Summary ================================================================================ Install 70 Packages Total download size: 64 M Installed size: 206 M Downloading Packages: (1/70): simde-devel-0.7.6-1.gitfefc785.fc39.i68 3.7 MB/s | 410 kB 00:00 (2/70): annobin-docs-12.12-1.fc39.noarch.rpm 824 kB/s | 95 kB 00:00 (3/70): gc-8.2.2-3.fc38.i686.rpm 3.3 MB/s | 112 kB 00:00 (4/70): annobin-plugin-gcc-12.12-1.fc39.i686.rp 3.2 MB/s | 894 kB 00:00 (5/70): cpp-13.1.1-2.fc39.i686.rpm 56 MB/s | 11 MB 00:00 (6/70): gcc-plugin-annobin-13.1.1-2.fc39.i686.r 1.6 MB/s | 44 kB 00:00 (7/70): glibc-headers-x86-2.37.9000-13.fc39.noa 30 MB/s | 481 kB 00:00 (8/70): glibc-devel-2.37.9000-13.fc39.i686.rpm 2.7 MB/s | 70 kB 00:00 (9/70): groff-base-1.22.4-11.fc38.i686.rpm 44 MB/s | 1.0 MB 00:00 (10/70): hedley-devel-15-17.fc39.i686.rpm 1.7 MB/s | 21 kB 00:00 (11/70): kernel-headers-6.4.0-0.rc6.git0.1.fc39 46 MB/s | 1.4 MB 00:00 (12/70): libasan-13.1.1-2.fc39.i686.rpm 33 MB/s | 503 kB 00:00 (13/70): libatomic-13.1.1-2.fc39.i686.rpm 2.1 MB/s | 30 kB 00:00 (14/70): libmpc-1.3.1-2.fc38.i686.rpm 6.0 MB/s | 77 kB 00:00 (15/70): libtool-ltdl-2.4.7-6.fc38.i686.rpm 3.5 MB/s | 39 kB 00:00 (16/70): libubsan-13.1.1-2.fc39.i686.rpm 19 MB/s | 232 kB 00:00 (17/70): libunistring-1.1-3.fc38.i686.rpm 33 MB/s | 552 kB 00:00 (18/70): libxcrypt-devel-4.4.35-1.fc39.i686.rpm 2.6 MB/s | 30 kB 00:00 (19/70): make-4.4.1-1.fc39.i686.rpm 30 MB/s | 588 kB 00:00 (20/70): ncurses-6.4-4.20230520.fc39.i686.rpm 27 MB/s | 411 kB 00:00 (21/70): perl-Carp-1.54-1.fc39.noarch.rpm 2.3 MB/s | 29 kB 00:00 (22/70): perl-Class-Struct-0.66-497.fc39.noarch 2.3 MB/s | 23 kB 00:00 (23/70): perl-DynaLoader-1.52-497.fc39.i686.rpm 2.6 MB/s | 27 kB 00:00 (24/70): perl-Encode-3.19-493.fc38.i686.rpm 37 MB/s | 1.2 MB 00:00 (25/70): perl-Errno-1.36-497.fc39.i686.rpm 1.5 MB/s | 16 kB 00:00 (26/70): perl-Exporter-5.77-490.fc38.noarch.rpm 1.7 MB/s | 31 kB 00:00 (27/70): perl-Fcntl-1.15-497.fc39.i686.rpm 1.9 MB/s | 22 kB 00:00 (28/70): perl-Fedora-VSP-0.001-31.fc38.noarch.r 1.7 MB/s | 23 kB 00:00 (29/70): perl-File-Basename-2.85-497.fc39.noarc 1.0 MB/s | 18 kB 00:00 (30/70): perl-File-Path-2.18-490.fc38.noarch.rp 2.9 MB/s | 35 kB 00:00 (31/70): perl-File-Temp-0.231.100-490.fc38.noar 3.9 MB/s | 59 kB 00:00 (32/70): perl-File-stat-1.12-497.fc39.noarch.rp 1.7 MB/s | 18 kB 00:00 (33/70): perl-Getopt-Long-2.54-2.fc38.noarch.rp 4.2 MB/s | 60 kB 00:00 (34/70): perl-Getopt-Std-1.13-497.fc39.noarch.r 1.6 MB/s | 17 kB 00:00 (35/70): perl-HTTP-Tiny-0.083-1.fc39.noarch.rpm 4.4 MB/s | 55 kB 00:00 (36/70): perl-IO-1.50-497.fc39.i686.rpm 4.2 MB/s | 89 kB 00:00 (37/70): perl-IPC-Open3-1.22-497.fc39.noarch.rp 2.2 MB/s | 24 kB 00:00 (38/70): perl-MIME-Base64-3.16-490.fc38.i686.rp 2.3 MB/s | 30 kB 00:00 (39/70): perl-POSIX-2.03-497.fc39.i686.rpm 9.1 MB/s | 103 kB 00:00 (40/70): perl-PathTools-3.89-1.fc39.i686.rpm 4.9 MB/s | 83 kB 00:00 (41/70): perl-Pod-Escapes-1.07-490.fc38.noarch. 1.7 MB/s | 20 kB 00:00 (42/70): perl-Pod-Perldoc-3.28.01-491.fc38.noar 6.3 MB/s | 80 kB 00:00 (43/70): perl-Pod-Simple-3.45-2.fc39.noarch.rpm 15 MB/s | 209 kB 00:00 (44/70): perl-Pod-Usage-2.03-4.fc38.noarch.rpm 2.9 MB/s | 40 kB 00:00 (45/70): perl-Scalar-List-Utils-1.63-490.fc38.i 5.8 MB/s | 75 kB 00:00 (46/70): perl-SelectSaver-1.02-497.fc39.noarch. 1.3 MB/s | 13 kB 00:00 (47/70): perl-Socket-2.037-1.fc39.i686.rpm 4.7 MB/s | 56 kB 00:00 (48/70): perl-Storable-3.32-1.fc39.i686.rpm 6.0 MB/s | 100 kB 00:00 (49/70): perl-Symbol-1.09-497.fc39.noarch.rpm 1.5 MB/s | 15 kB 00:00 (50/70): perl-Term-ANSIColor-5.01-491.fc38.noar 3.4 MB/s | 47 kB 00:00 (51/70): perl-Term-Cap-1.18-1.fc39.noarch.rpm 1.7 MB/s | 22 kB 00:00 (52/70): perl-Text-ParseWords-3.31-490.fc38.noa 1.4 MB/s | 16 kB 00:00 (53/70): perl-Text-Tabs+Wrap-2023.0511-1.fc39.n 1.9 MB/s | 22 kB 00:00 (54/70): perl-Time-Local-1.350-1.fc39.noarch.rp 2.5 MB/s | 34 kB 00:00 (55/70): perl-constant-1.33-492.fc39.noarch.rpm 1.5 MB/s | 23 kB 00:00 (56/70): perl-generators-1.16-2.fc38.noarch.rpm 1.4 MB/s | 17 kB 00:00 (57/70): perl-if-0.61.000-497.fc39.noarch.rpm 1.4 MB/s | 15 kB 00:00 (58/70): perl-interpreter-5.36.1-497.fc39.i686. 6.8 MB/s | 73 kB 00:00 (59/70): perl-libs-5.36.1-497.fc39.i686.rpm 45 MB/s | 2.2 MB 00:00 (60/70): perl-locale-1.10-497.fc39.noarch.rpm 1.5 MB/s | 15 kB 00:00 (61/70): perl-macros-5.36.1-497.fc39.noarch.rpm 1.1 MB/s | 13 kB 00:00 (62/70): perl-mro-1.26-497.fc39.i686.rpm 2.9 MB/s | 31 kB 00:00 (63/70): perl-overload-1.35-497.fc39.noarch.rpm 4.4 MB/s | 47 kB 00:00 (64/70): perl-overloading-0.02-497.fc39.noarch. 1.3 MB/s | 14 kB 00:00 (65/70): perl-parent-0.241-1.fc39.noarch.rpm 1.3 MB/s | 14 kB 00:00 (66/70): perl-podlators-5.01-2.fc38.noarch.rpm 7.2 MB/s | 121 kB 00:00 (67/70): perl-vars-1.05-497.fc39.noarch.rpm 1.3 MB/s | 14 kB 00:00 (68/70): zlib-devel-1.2.13-3.fc38.i686.rpm 3.8 MB/s | 45 kB 00:00 (69/70): guile22-2.2.7-8.fc39.i686.rpm 4.1 MB/s | 6.5 MB 00:01 (70/70): gcc-13.1.1-2.fc39.i686.rpm 5.1 MB/s | 34 MB 00:06 -------------------------------------------------------------------------------- Total 9.3 MB/s | 64 MB 00:06 Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Preparing : 1/1 Installing : kernel-headers-6.4.0-0.rc6.git0.1.fc39.i686 1/70 Installing : hedley-devel-15-17.fc39.i686 2/70 Installing : glibc-headers-x86-2.37.9000-13.fc39.noarch 3/70 Installing : libxcrypt-devel-4.4.35-1.fc39.i686 4/70 Installing : glibc-devel-2.37.9000-13.fc39.i686 5/70 Installing : annobin-docs-12.12-1.fc39.noarch 6/70 Installing : libmpc-1.3.1-2.fc38.i686 7/70 Installing : cpp-13.1.1-2.fc39.i686 8/70 Installing : ncurses-6.4-4.20230520.fc39.i686 9/70 Installing : libunistring-1.1-3.fc38.i686 10/70 Installing : libubsan-13.1.1-2.fc39.i686 11/70 Installing : libtool-ltdl-2.4.7-6.fc38.i686 12/70 Installing : libatomic-13.1.1-2.fc39.i686 13/70 Installing : libasan-13.1.1-2.fc39.i686 14/70 Running scriptlet: groff-base-1.22.4-11.fc38.i686 15/70 Installing : groff-base-1.22.4-11.fc38.i686 15/70 Running scriptlet: groff-base-1.22.4-11.fc38.i686 15/70 Installing : perl-Text-Tabs+Wrap-2023.0511-1.fc39.noarch 16/70 Installing : perl-if-0.61.000-497.fc39.noarch 17/70 Installing : perl-locale-1.10-497.fc39.noarch 18/70 Installing : perl-Time-Local-2:1.350-1.fc39.noarch 19/70 Installing : perl-File-Path-2.18-490.fc38.noarch 20/70 Installing : perl-Pod-Escapes-1:1.07-490.fc38.noarch 21/70 Installing : perl-Class-Struct-0.66-497.fc39.noarch 22/70 Installing : perl-Term-ANSIColor-5.01-491.fc38.noarch 23/70 Installing : perl-POSIX-2.03-497.fc39.i686 24/70 Installing : perl-IPC-Open3-1.22-497.fc39.noarch 25/70 Installing : perl-HTTP-Tiny-0.083-1.fc39.noarch 26/70 Installing : perl-File-Temp-1:0.231.100-490.fc38.noarch 27/70 Installing : perl-Term-Cap-1.18-1.fc39.noarch 28/70 Installing : perl-Pod-Simple-1:3.45-2.fc39.noarch 29/70 Installing : perl-Socket-4:2.037-1.fc39.i686 30/70 Installing : perl-SelectSaver-1.02-497.fc39.noarch 31/70 Installing : perl-Symbol-1.09-497.fc39.noarch 32/70 Installing : perl-File-stat-1.12-497.fc39.noarch 33/70 Installing : perl-podlators-1:5.01-2.fc38.noarch 34/70 Installing : perl-Pod-Perldoc-3.28.01-491.fc38.noarch 35/70 Installing : perl-Fcntl-1.15-497.fc39.i686 36/70 Installing : perl-Text-ParseWords-3.31-490.fc38.noarch 37/70 Installing : perl-mro-1.26-497.fc39.i686 38/70 Installing : perl-IO-1.50-497.fc39.i686 39/70 Installing : perl-overloading-0.02-497.fc39.noarch 40/70 Installing : perl-Pod-Usage-4:2.03-4.fc38.noarch 41/70 Installing : perl-Errno-1.36-497.fc39.i686 42/70 Installing : perl-File-Basename-2.85-497.fc39.noarch 43/70 Installing : perl-Getopt-Std-1.13-497.fc39.noarch 44/70 Installing : perl-MIME-Base64-3.16-490.fc38.i686 45/70 Installing : perl-Scalar-List-Utils-5:1.63-490.fc38.i686 46/70 Installing : perl-constant-1.33-492.fc39.noarch 47/70 Installing : perl-Storable-1:3.32-1.fc39.i686 48/70 Installing : perl-overload-1.35-497.fc39.noarch 49/70 Installing : perl-parent-1:0.241-1.fc39.noarch 50/70 Installing : perl-vars-1.05-497.fc39.noarch 51/70 Installing : perl-Getopt-Long-1:2.54-2.fc38.noarch 52/70 Installing : perl-Carp-1.54-1.fc39.noarch 53/70 Installing : perl-Exporter-5.77-490.fc38.noarch 54/70 Installing : perl-PathTools-3.89-1.fc39.i686 55/70 Installing : perl-DynaLoader-1.52-497.fc39.i686 56/70 Installing : perl-Encode-4:3.19-493.fc38.i686 57/70 Installing : perl-libs-4:5.36.1-497.fc39.i686 58/70 Installing : perl-interpreter-4:5.36.1-497.fc39.i686 59/70 Installing : perl-macros-4:5.36.1-497.fc39.noarch 60/70 Installing : perl-Fedora-VSP-0.001-31.fc38.noarch 61/70 Installing : gc-8.2.2-3.fc38.i686 62/70 Installing : perl-generators-1.16-2.fc38.noarch 63/70 Installing : simde-devel-0.7.6-1.gitfefc785.fc39.i686 64/70 Installing : zlib-devel-1.2.13-3.fc38.i686 65/70 Installing : guile22-2.2.7-8.fc39.i686 66/70 Installing : make-1:4.4.1-1.fc39.i686 67/70 Installing : gcc-13.1.1-2.fc39.i686 68/70 Running scriptlet: gcc-13.1.1-2.fc39.i686 68/70 Installing : annobin-plugin-gcc-12.12-1.fc39.i686 69/70 Running scriptlet: annobin-plugin-gcc-12.12-1.fc39.i686 69/70 Installing : gcc-plugin-annobin-13.1.1-2.fc39.i686 70/70 Running scriptlet: gcc-plugin-annobin-13.1.1-2.fc39.i686 70/70 Verifying : simde-devel-0.7.6-1.gitfefc785.fc39.i686 1/70 Verifying : annobin-docs-12.12-1.fc39.noarch 2/70 Verifying : annobin-plugin-gcc-12.12-1.fc39.i686 3/70 Verifying : cpp-13.1.1-2.fc39.i686 4/70 Verifying : gc-8.2.2-3.fc38.i686 5/70 Verifying : gcc-13.1.1-2.fc39.i686 6/70 Verifying : gcc-plugin-annobin-13.1.1-2.fc39.i686 7/70 Verifying : glibc-devel-2.37.9000-13.fc39.i686 8/70 Verifying : glibc-headers-x86-2.37.9000-13.fc39.noarch 9/70 Verifying : groff-base-1.22.4-11.fc38.i686 10/70 Verifying : guile22-2.2.7-8.fc39.i686 11/70 Verifying : hedley-devel-15-17.fc39.i686 12/70 Verifying : kernel-headers-6.4.0-0.rc6.git0.1.fc39.i686 13/70 Verifying : libasan-13.1.1-2.fc39.i686 14/70 Verifying : libatomic-13.1.1-2.fc39.i686 15/70 Verifying : libmpc-1.3.1-2.fc38.i686 16/70 Verifying : libtool-ltdl-2.4.7-6.fc38.i686 17/70 Verifying : libubsan-13.1.1-2.fc39.i686 18/70 Verifying : libunistring-1.1-3.fc38.i686 19/70 Verifying : libxcrypt-devel-4.4.35-1.fc39.i686 20/70 Verifying : make-1:4.4.1-1.fc39.i686 21/70 Verifying : ncurses-6.4-4.20230520.fc39.i686 22/70 Verifying : perl-Carp-1.54-1.fc39.noarch 23/70 Verifying : perl-Class-Struct-0.66-497.fc39.noarch 24/70 Verifying : perl-DynaLoader-1.52-497.fc39.i686 25/70 Verifying : perl-Encode-4:3.19-493.fc38.i686 26/70 Verifying : perl-Errno-1.36-497.fc39.i686 27/70 Verifying : perl-Exporter-5.77-490.fc38.noarch 28/70 Verifying : perl-Fcntl-1.15-497.fc39.i686 29/70 Verifying : perl-Fedora-VSP-0.001-31.fc38.noarch 30/70 Verifying : perl-File-Basename-2.85-497.fc39.noarch 31/70 Verifying : perl-File-Path-2.18-490.fc38.noarch 32/70 Verifying : perl-File-Temp-1:0.231.100-490.fc38.noarch 33/70 Verifying : perl-File-stat-1.12-497.fc39.noarch 34/70 Verifying : perl-Getopt-Long-1:2.54-2.fc38.noarch 35/70 Verifying : perl-Getopt-Std-1.13-497.fc39.noarch 36/70 Verifying : perl-HTTP-Tiny-0.083-1.fc39.noarch 37/70 Verifying : perl-IO-1.50-497.fc39.i686 38/70 Verifying : perl-IPC-Open3-1.22-497.fc39.noarch 39/70 Verifying : perl-MIME-Base64-3.16-490.fc38.i686 40/70 Verifying : perl-POSIX-2.03-497.fc39.i686 41/70 Verifying : perl-PathTools-3.89-1.fc39.i686 42/70 Verifying : perl-Pod-Escapes-1:1.07-490.fc38.noarch 43/70 Verifying : perl-Pod-Perldoc-3.28.01-491.fc38.noarch 44/70 Verifying : perl-Pod-Simple-1:3.45-2.fc39.noarch 45/70 Verifying : perl-Pod-Usage-4:2.03-4.fc38.noarch 46/70 Verifying : perl-Scalar-List-Utils-5:1.63-490.fc38.i686 47/70 Verifying : perl-SelectSaver-1.02-497.fc39.noarch 48/70 Verifying : perl-Socket-4:2.037-1.fc39.i686 49/70 Verifying : perl-Storable-1:3.32-1.fc39.i686 50/70 Verifying : perl-Symbol-1.09-497.fc39.noarch 51/70 Verifying : perl-Term-ANSIColor-5.01-491.fc38.noarch 52/70 Verifying : perl-Term-Cap-1.18-1.fc39.noarch 53/70 Verifying : perl-Text-ParseWords-3.31-490.fc38.noarch 54/70 Verifying : perl-Text-Tabs+Wrap-2023.0511-1.fc39.noarch 55/70 Verifying : perl-Time-Local-2:1.350-1.fc39.noarch 56/70 Verifying : perl-constant-1.33-492.fc39.noarch 57/70 Verifying : perl-generators-1.16-2.fc38.noarch 58/70 Verifying : perl-if-0.61.000-497.fc39.noarch 59/70 Verifying : perl-interpreter-4:5.36.1-497.fc39.i686 60/70 Verifying : perl-libs-4:5.36.1-497.fc39.i686 61/70 Verifying : perl-locale-1.10-497.fc39.noarch 62/70 Verifying : perl-macros-4:5.36.1-497.fc39.noarch 63/70 Verifying : perl-mro-1.26-497.fc39.i686 64/70 Verifying : perl-overload-1.35-497.fc39.noarch 65/70 Verifying : perl-overloading-0.02-497.fc39.noarch 66/70 Verifying : perl-parent-1:0.241-1.fc39.noarch 67/70 Verifying : perl-podlators-1:5.01-2.fc38.noarch 68/70 Verifying : perl-vars-1.05-497.fc39.noarch 69/70 Verifying : zlib-devel-1.2.13-3.fc38.i686 70/70 Installed products updated. Installed: annobin-docs-12.12-1.fc39.noarch annobin-plugin-gcc-12.12-1.fc39.i686 cpp-13.1.1-2.fc39.i686 gc-8.2.2-3.fc38.i686 gcc-13.1.1-2.fc39.i686 gcc-plugin-annobin-13.1.1-2.fc39.i686 glibc-devel-2.37.9000-13.fc39.i686 glibc-headers-x86-2.37.9000-13.fc39.noarch groff-base-1.22.4-11.fc38.i686 guile22-2.2.7-8.fc39.i686 hedley-devel-15-17.fc39.i686 kernel-headers-6.4.0-0.rc6.git0.1.fc39.i686 libasan-13.1.1-2.fc39.i686 libatomic-13.1.1-2.fc39.i686 libmpc-1.3.1-2.fc38.i686 libtool-ltdl-2.4.7-6.fc38.i686 libubsan-13.1.1-2.fc39.i686 libunistring-1.1-3.fc38.i686 libxcrypt-devel-4.4.35-1.fc39.i686 make-1:4.4.1-1.fc39.i686 ncurses-6.4-4.20230520.fc39.i686 perl-Carp-1.54-1.fc39.noarch perl-Class-Struct-0.66-497.fc39.noarch perl-DynaLoader-1.52-497.fc39.i686 perl-Encode-4:3.19-493.fc38.i686 perl-Errno-1.36-497.fc39.i686 perl-Exporter-5.77-490.fc38.noarch perl-Fcntl-1.15-497.fc39.i686 perl-Fedora-VSP-0.001-31.fc38.noarch perl-File-Basename-2.85-497.fc39.noarch perl-File-Path-2.18-490.fc38.noarch perl-File-Temp-1:0.231.100-490.fc38.noarch perl-File-stat-1.12-497.fc39.noarch perl-Getopt-Long-1:2.54-2.fc38.noarch perl-Getopt-Std-1.13-497.fc39.noarch perl-HTTP-Tiny-0.083-1.fc39.noarch perl-IO-1.50-497.fc39.i686 perl-IPC-Open3-1.22-497.fc39.noarch perl-MIME-Base64-3.16-490.fc38.i686 perl-POSIX-2.03-497.fc39.i686 perl-PathTools-3.89-1.fc39.i686 perl-Pod-Escapes-1:1.07-490.fc38.noarch perl-Pod-Perldoc-3.28.01-491.fc38.noarch perl-Pod-Simple-1:3.45-2.fc39.noarch perl-Pod-Usage-4:2.03-4.fc38.noarch perl-Scalar-List-Utils-5:1.63-490.fc38.i686 perl-SelectSaver-1.02-497.fc39.noarch perl-Socket-4:2.037-1.fc39.i686 perl-Storable-1:3.32-1.fc39.i686 perl-Symbol-1.09-497.fc39.noarch perl-Term-ANSIColor-5.01-491.fc38.noarch perl-Term-Cap-1.18-1.fc39.noarch perl-Text-ParseWords-3.31-490.fc38.noarch perl-Text-Tabs+Wrap-2023.0511-1.fc39.noarch perl-Time-Local-2:1.350-1.fc39.noarch perl-constant-1.33-492.fc39.noarch perl-generators-1.16-2.fc38.noarch perl-if-0.61.000-497.fc39.noarch perl-interpreter-4:5.36.1-497.fc39.i686 perl-libs-4:5.36.1-497.fc39.i686 perl-locale-1.10-497.fc39.noarch perl-macros-4:5.36.1-497.fc39.noarch perl-mro-1.26-497.fc39.i686 perl-overload-1.35-497.fc39.noarch perl-overloading-0.02-497.fc39.noarch perl-parent-1:0.241-1.fc39.noarch perl-podlators-1:5.01-2.fc38.noarch perl-vars-1.05-497.fc39.noarch simde-devel-0.7.6-1.gitfefc785.fc39.i686 zlib-devel-1.2.13-3.fc38.i686 Complete! Finish: build setup for bwa-0.7.17-9.fc39.src.rpm Start: rpmbuild bwa-0.7.17-9.fc39.src.rpm warning: %patchN is deprecated (2 usages found), use %patch N (or %patch -P N) Building target platforms: i686 Building for target i686 setting SOURCE_DATE_EPOCH=1674000000 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.GCNLoE + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf bwa-0.7.17 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/bwa-0.7.17.tar.bz2 + STATUS=0 + '[' 0 -ne 0 ']' + cd bwa-0.7.17 + /usr/bin/mkdir -p SPECPARTS + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + echo 'Patch #0 (bwa-fix-build-gcc10.patch):' Patch #0 (bwa-fix-build-gcc10.patch): + /usr/bin/patch --no-backup-if-mismatch -f -p1 --fuzz=0 patching file rle.h Patch #1 (bwa-simde.patch): + echo 'Patch #1 (bwa-simde.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p1 --fuzz=0 patching file ksw.c + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.LTC15w + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd bwa-0.7.17 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O3' + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP' + /usr/bin/make -O -j2 V=1 VERBOSE=1 'CFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP' gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS kthread.c -o kthread.o gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS kstring.c -o kstring.o gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS utils.c -o utils.o gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS ksw.c -o ksw.o gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS bntseq.c -o bntseq.o gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS bwt.c -o bwt.o gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS bwa.c -o bwa.o gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS bwamem_pair.c -o bwamem_pair.o bwamem_pair.c: In function 'mem_pestat': bwamem_pair.c:65:106: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 65 | if (bwa_verbose >= 3) fprintf(stderr, "[M::%s] # candidate unique pairs for (FF, FR, RF, RR): (%ld, %ld, %ld, %ld)\n", __func__, isize[0].n, isize[1].n, isize[2].n, isize[3].n); | ~~^ ~~~~~~~~~~ | | | | long int size_t {aka unsigned int} | %d bwamem_pair.c:65:111: warning: format '%ld' expects argument of type 'long int', but argument 5 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 65 | if (bwa_verbose >= 3) fprintf(stderr, "[M::%s] # candidate unique pairs for (FF, FR, RF, RR): (%ld, %ld, %ld, %ld)\n", __func__, isize[0].n, isize[1].n, isize[2].n, isize[3].n); | ~~^ ~~~~~~~~~~ | | | | long int size_t {aka unsigned int} | %d bwamem_pair.c:65:116: warning: format '%ld' expects argument of type 'long int', but argument 6 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 65 | if (bwa_verbose >= 3) fprintf(stderr, "[M::%s] # candidate unique pairs for (FF, FR, RF, RR): (%ld, %ld, %ld, %ld)\n", __func__, isize[0].n, isize[1].n, isize[2].n, isize[3].n); | ~~^ ~~~~~~~~~~ | | | | long int size_t {aka unsigned int} | %d bwamem_pair.c:65:121: warning: format '%ld' expects argument of type 'long int', but argument 7 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 65 | if (bwa_verbose >= 3) fprintf(stderr, "[M::%s] # candidate unique pairs for (FF, FR, RF, RR): (%ld, %ld, %ld, %ld)\n", __func__, isize[0].n, isize[1].n, isize[2].n, isize[3].n); | ~~^ ~~~~~~~~~~ | | | | long int size_t {aka unsigned int} | %d gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS bwamem_extra.c -o bwamem_extra.o gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS malloc_wrap.c -o malloc_wrap.o gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS QSufSort.c -o QSufSort.o gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS bwt_gen.c -o bwt_gen.o bwt_gen.c: In function 'BWTIncBuildRelativeRank': bwt_gen.c:879:17: warning: variable 'oldInverseSa0RelativeRank' set but not used [-Wunused-but-set-variable] 879 | bgint_t oldInverseSa0RelativeRank = 0; | ^~~~~~~~~~~~~~~~~~~~~~~~~ bwt_gen.c: In function 'BWTIncMergeBwt': bwt_gen.c:953:22: warning: variable 'bitsInWordMinusBitPerChar' set but not used [-Wunused-but-set-variable] 953 | unsigned int bitsInWordMinusBitPerChar; | ^~~~~~~~~~~~~~~~~~~~~~~~~ gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS rope.c -o rope.o rope.c: In function 'rope_restore_node': rope.c:282:9: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 282 | fread(&is_bottom, 1, 1, fp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ rope.c:283:9: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 283 | fread(&n, 2, 1, fp); | ^~~~~~~~~~~~~~~~~~~ rope.c:291:25: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 291 | fread(p[i].c, 8, 6, fp); | ^~~~~~~~~~~~~~~~~~~~~~~ rope.c:292:25: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 292 | fread(q, 2, 1, fp); | ^~~~~~~~~~~~~~~~~~ rope.c:293:25: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 293 | fread(q + 1, 1, *q, fp); | ^~~~~~~~~~~~~~~~~~~~~~~ rope.c: In function 'rope_restore': rope.c:312:9: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 312 | fread(&r->max_nodes, 4, 1, fp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ rope.c:313:9: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 313 | fread(&r->block_len, 4, 1, fp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS bwamem.c -o bwamem.o bwamem.c: In function 'mem_align1_core': bwamem.c:1075:33: warning: format '%ld' expects argument of type 'long int', but argument 2 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 1075 | err_printf("* %ld chains remain after removing duplicated chains\n", regs.n); | ~~^ ~~~~~~ | | | | long int size_t {aka unsigned int} | %d gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS is.c -o is.o gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS rle.c -o rle.o gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS bwashm.c -o bwashm.o bwashm.c: In function 'bwa_shm_stage': bwashm.c:29:9: warning: ignoring return value of 'ftruncate' declared with attribute 'warn_unused_result' [-Wunused-result] 29 | ftruncate(shmid, BWA_CTL_SIZE); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ bwashm.c:66:9: warning: ignoring return value of 'ftruncate' declared with attribute 'warn_unused_result' [-Wunused-result] 66 | ftruncate(shmid, idx->l_mem); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS bwtindex.c -o bwtindex.o gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS bwaseqio.c -o bwaseqio.o gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS bwtgap.c -o bwtgap.o gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS bwtaln.c -o bwtaln.o gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS bwase.c -o bwase.o gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS bamlite.c -o bamlite.o gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS kopen.c -o kopen.o gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS pemerge.c -o pemerge.o gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS maxk.c -o maxk.o gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS bwape.c -o bwape.o gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS bwtsw2_main.c -o bwtsw2_main.o gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS bwtsw2_aux.c -o bwtsw2_aux.o gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS bwt_lite.c -o bwt_lite.o gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS bwtsw2_core.c -o bwtsw2_core.o gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS bwtsw2_chain.c -o bwtsw2_chain.o gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS fastmap.c -o fastmap.o fastmap.c: In function 'main_fastmap': fastmap.c:413:39: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 413 | err_printf("SQ\t%s\t%ld", seq->name.s, seq->seq.l); | ~~^ ~~~~~~~~~~ | | | | long int size_t {aka unsigned int} | %d gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS main.c -o main.o ar -csru libbwa.a utils.o kthread.o kstring.o ksw.o bwt.o bntseq.o bwa.o bwamem.o bwamem_pair.o bwamem_extra.o malloc_wrap.o QSufSort.o bwt_gen.o rope.o rle.o is.o bwtindex.o gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS bwtsw2_pair.c -o bwtsw2_pair.o gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS bwashm.o bwase.o bwaseqio.o bwtgap.o bwtaln.o bamlite.o bwape.o kopen.o pemerge.o maxk.o bwtsw2_core.o bwtsw2_main.o bwtsw2_aux.o bwt_lite.o bwtsw2_chain.o fastmap.o bwtsw2_pair.o main.o -o bwa -L. -lbwa -lm -lz -lpthread -lrt + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.1pHHDr + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/bwa-0.7.17-9.fc39.i386 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/bwa-0.7.17-9.fc39.i386 ++ dirname /builddir/build/BUILDROOT/bwa-0.7.17-9.fc39.i386 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/bwa-0.7.17-9.fc39.i386 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd bwa-0.7.17 + rm -rf /builddir/build/BUILDROOT/bwa-0.7.17-9.fc39.i386 + mkdir -p /builddir/build/BUILDROOT/bwa-0.7.17-9.fc39.i386//usr/bin + mkdir -p /builddir/build/BUILDROOT/bwa-0.7.17-9.fc39.i386//usr/share/bwa/bwakit + mkdir -p /builddir/build/BUILDROOT/bwa-0.7.17-9.fc39.i386//usr/share/man/man1 + install -m 0755 bwa /builddir/build/BUILDROOT/bwa-0.7.17-9.fc39.i386//usr/bin + install -m 0755 qualfa2fq.pl /builddir/build/BUILDROOT/bwa-0.7.17-9.fc39.i386//usr/bin + install -m 0755 xa2multi.pl /builddir/build/BUILDROOT/bwa-0.7.17-9.fc39.i386//usr/bin + install -m 0755 bwakit/README.md bwakit/bwa-postalt.js bwakit/run-HLA bwakit/run-bwamem bwakit/run-gen-ref bwakit/typeHLA-selctg.js bwakit/typeHLA.js bwakit/typeHLA.sh /builddir/build/BUILDROOT/bwa-0.7.17-9.fc39.i386//usr/share/bwa/bwakit + install -m 0644 bwa.1 /builddir/build/BUILDROOT/bwa-0.7.17-9.fc39.i386//usr/share/man/man1/bwa.1 + /usr/bin/find-debuginfo -j2 --strict-build-id -m -i --build-id-seed 0.7.17-9.fc39 --unique-debug-suffix -0.7.17-9.fc39.i386 --unique-debug-src-base bwa-0.7.17-9.fc39.i386 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/bwa-0.7.17 extracting debug info from /builddir/build/BUILDROOT/bwa-0.7.17-9.fc39.i386/usr/bin/bwa original debug info size: 1296kB, size after compression: 1220kB /usr/bin/sepdebugcrcfix: Updated 1 CRC32s, 0 CRC32s did match. 1068 blocks + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs mangling shebang in /usr/share/bwa/bwakit/typeHLA.sh from /bin/bash to #!/usr/bin/bash *** WARNING: ./usr/share/bwa/bwakit/typeHLA.js is executable but has no shebang, removing executable bit *** WARNING: ./usr/share/bwa/bwakit/typeHLA-selctg.js is executable but has no shebang, removing executable bit mangling shebang in /usr/share/bwa/bwakit/run-gen-ref from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/bwa/bwakit/run-bwamem from /usr/bin/env perl to #!/usr/bin/perl mangling shebang in /usr/share/bwa/bwakit/run-HLA from /bin/bash to #!/usr/bin/bash *** WARNING: ./usr/share/bwa/bwakit/bwa-postalt.js is executable but has no shebang, removing executable bit *** WARNING: ./usr/share/bwa/bwakit/README.md is executable but has no shebang, removing executable bit mangling shebang in /usr/bin/xa2multi.pl from /usr/bin/env perl to #!/usr/bin/perl mangling shebang in /usr/bin/qualfa2fq.pl from /usr/bin/env perl to #!/usr/bin/perl + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j2 + /usr/lib/rpm/redhat/brp-python-hardlink Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.hvu60X + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd bwa-0.7.17 + ./bwa + grep '^Version: 0.7.17' Version: 0.7.17-r1188 + RPM_EC=0 ++ jobs -p + exit 0 Processing files: bwa-0.7.17-9.fc39.i686 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.OywDCw + umask 022 + cd /builddir/build/BUILD + cd bwa-0.7.17 + DOCDIR=/builddir/build/BUILDROOT/bwa-0.7.17-9.fc39.i386/usr/share/doc/bwa + export LC_ALL=C + LC_ALL=C + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/bwa-0.7.17-9.fc39.i386/usr/share/doc/bwa + cp -pr /builddir/build/BUILD/bwa-0.7.17/COPYING /builddir/build/BUILDROOT/bwa-0.7.17-9.fc39.i386/usr/share/doc/bwa + cp -pr /builddir/build/BUILD/bwa-0.7.17/NEWS.md /builddir/build/BUILDROOT/bwa-0.7.17-9.fc39.i386/usr/share/doc/bwa + cp -pr /builddir/build/BUILD/bwa-0.7.17/README.md /builddir/build/BUILDROOT/bwa-0.7.17-9.fc39.i386/usr/share/doc/bwa + cp -pr /builddir/build/BUILD/bwa-0.7.17/README-alt.md /builddir/build/BUILDROOT/bwa-0.7.17-9.fc39.i386/usr/share/doc/bwa + RPM_EC=0 ++ jobs -p + exit 0 Provides: bwa = 0.7.17-9.fc39 bwa(x86-32) = 0.7.17-9.fc39 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: /usr/bin/bash /usr/bin/perl libc.so.6 libc.so.6(GLIBC_2.0) libc.so.6(GLIBC_2.1) libc.so.6(GLIBC_2.15) libc.so.6(GLIBC_2.3) libc.so.6(GLIBC_2.3.2) libc.so.6(GLIBC_2.3.4) libc.so.6(GLIBC_2.33) libc.so.6(GLIBC_2.34) libc.so.6(GLIBC_2.4) libc.so.6(GLIBC_2.7) libm.so.6 libm.so.6(GLIBC_2.0) libm.so.6(GLIBC_2.29) libz.so.1 perl(Getopt::Std) perl(strict) perl(warnings) rtld(GNU_HASH) Processing files: bwa-debugsource-0.7.17-9.fc39.i686 Provides: bwa-debugsource = 0.7.17-9.fc39 bwa-debugsource(x86-32) = 0.7.17-9.fc39 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: bwa-debuginfo-0.7.17-9.fc39.i686 Provides: bwa-debuginfo = 0.7.17-9.fc39 bwa-debuginfo(x86-32) = 0.7.17-9.fc39 debuginfo(build-id) = 18234654fdb4a2adfcb57630bdc48d4c90cbb366 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: bwa-debugsource(x86-32) = 0.7.17-9.fc39 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/bwa-0.7.17-9.fc39.i386 Wrote: /builddir/build/RPMS/bwa-0.7.17-9.fc39.i686.rpm Wrote: /builddir/build/RPMS/bwa-debuginfo-0.7.17-9.fc39.i686.rpm Wrote: /builddir/build/RPMS/bwa-debugsource-0.7.17-9.fc39.i686.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.CzHSdJ + umask 022 + cd /builddir/build/BUILD + cd bwa-0.7.17 + /usr/bin/rm -rf /builddir/build/BUILDROOT/bwa-0.7.17-9.fc39.i386 + RPM_EC=0 ++ jobs -p + exit 0 Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.YOGmxX + umask 022 + cd /builddir/build/BUILD + rm -rf bwa-0.7.17 bwa-0.7.17.gemspec + RPM_EC=0 ++ jobs -p + exit 0 RPM build warnings: %patchN is deprecated (2 usages found), use %patch N (or %patch -P N) Finish: rpmbuild bwa-0.7.17-9.fc39.src.rpm Finish: build phase for bwa-0.7.17-9.fc39.src.rpm INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-i686-1686591774.156479/root/var/log/dnf.rpm.log /var/lib/mock/fedora-rawhide-i686-1686591774.156479/root/var/log/dnf.librepo.log /var/lib/mock/fedora-rawhide-i686-1686591774.156479/root/var/log/dnf.log INFO: Done(/var/lib/copr-rpmbuild/results/bwa-0.7.17-9.fc39.src.rpm) Config(child) 0 minutes 30 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool