Warning: Permanently added '2620:52:3:1:dead:beef:cafe:c188' (ED25519) to the list of known hosts. You can reproduce this build on your computer by running: sudo dnf install copr-rpmbuild /usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/8148149-fedora-41-x86_64 --chroot fedora-41-x86_64 Version: 1.0 PID: 19041 Logging PID: 19042 Task: {'allow_user_ssh': False, 'appstream': False, 'background': False, 'build_id': 8148149, 'buildroot_pkgs': [], 'chroot': 'fedora-41-x86_64', 'enable_net': False, 'fedora_review': False, 'git_hash': '6238dfb6625bd156f2c54a4d7e438ee1937345b3', 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/jplesnik/swig-rebuild/libsedml', 'isolation': 'default', 'memory_reqs': 2048, 'package_name': 'libsedml', 'package_version': '2:2.0.32-13', 'project_dirname': 'swig-rebuild', 'project_name': 'swig-rebuild', 'project_owner': 'jplesnik', 'repo_priority': None, 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/jplesnik/swig-rebuild/fedora-41-x86_64/', 'id': 'copr_base', 'name': 'Copr repository', 'priority': None}], 'sandbox': 'jplesnik/swig-rebuild--jplesnik', 'source_json': {}, 'source_type': None, 'ssh_public_keys': None, 'storage': None, 'submitter': 'jplesnik', 'tags': [], 'task_id': '8148149-fedora-41-x86_64', 'timeout': 18000, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/jplesnik/swig-rebuild/libsedml /var/lib/copr-rpmbuild/workspace/workdir-f43ubg19/libsedml --depth 500 --no-single-branch --recursive cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/jplesnik/swig-rebuild/libsedml', '/var/lib/copr-rpmbuild/workspace/workdir-f43ubg19/libsedml', '--depth', '500', '--no-single-branch', '--recursive'] cwd: . rc: 0 stdout: stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-f43ubg19/libsedml'... Running: git checkout 6238dfb6625bd156f2c54a4d7e438ee1937345b3 -- cmd: ['git', 'checkout', '6238dfb6625bd156f2c54a4d7e438ee1937345b3', '--'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-f43ubg19/libsedml rc: 0 stdout: stderr: Note: switching to '6238dfb6625bd156f2c54a4d7e438ee1937345b3'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at 6238dfb automatic import of libsedml Running: dist-git-client sources cmd: ['dist-git-client', 'sources'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-f43ubg19/libsedml rc: 0 stdout: stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD INFO: Reading sources specification file: sources INFO: Downloading libSEDML-2.0.32.tar.gz INFO: Reading stdout from command: curl --help all INFO: Calling: curl -H Pragma: -o libSEDML-2.0.32.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/jplesnik/swig-rebuild/libsedml/libSEDML-2.0.32.tar.gz/md5/96ad65d206a3f20c94b5f794ab277352/libSEDML-2.0.32.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 943k 100 943k 0 0 7903k 0 --:--:-- --:--:-- --:--:-- 7932k INFO: Reading stdout from command: md5sum libSEDML-2.0.32.tar.gz /usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated Running (timeout=18000): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-f43ubg19/libsedml/libsedml.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-f43ubg19/libsedml --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1729099389.469766 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 5.9 starting (python version = 3.12.1, NVR = mock-5.9-1.fc39), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-f43ubg19/libsedml/libsedml.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-f43ubg19/libsedml --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1729099389.469766 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-f43ubg19/libsedml/libsedml.spec) Config(fedora-41-x86_64) Start: clean chroot Finish: clean chroot Mock Version: 5.9 INFO: Mock Version: 5.9 Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-41-x86_64-bootstrap-1729099389.469766/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: Guessed host environment type: unknown INFO: Using bootstrap image: registry.fedoraproject.org/fedora:41 INFO: Pulling image: registry.fedoraproject.org/fedora:41 INFO: Copy content of container registry.fedoraproject.org/fedora:41 to /var/lib/mock/fedora-41-x86_64-bootstrap-1729099389.469766/root INFO: Checking that registry.fedoraproject.org/fedora:41 image matches host's architecture INFO: mounting registry.fedoraproject.org/fedora:41 with podman image mount INFO: image registry.fedoraproject.org/fedora:41 as /var/lib/containers/storage/overlay/9c5d06f43e17c2c92b21878e872a55cfd1ff54cdf43139ea183ef7c41c96ff15/merged INFO: umounting image registry.fedoraproject.org/fedora:41 (/var/lib/containers/storage/overlay/9c5d06f43e17c2c92b21878e872a55cfd1ff54cdf43139ea183ef7c41c96ff15/merged) with podman image umount INFO: Package manager dnf5 detected and used (fallback) INFO: Not updating bootstrap chroot, bootstrap_image_ready=True Start(bootstrap): creating root cache Finish(bootstrap): creating root cache Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-41-x86_64-1729099389.469766/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf5 detected and used (direct choice) INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.20.0-1.fc41.x86_64 rpm-sequoia-1.7.0-2.fc41.x86_64 dnf5-5.2.6.2-1.fc41.x86_64 dnf5-plugins-5.2.6.2-1.fc41.x86_64 Start: installing minimal buildroot with dnf5 Updating and loading repositories: updates 100% | 1.0 MiB/s | 28.3 KiB | 00m00s fedora 100% | 1.1 MiB/s | 25.1 KiB | 00m00s Copr repository 100% | 32.6 KiB/s | 1.5 KiB | 00m00s Copr repository 100% | 6.2 MiB/s | 754.0 KiB | 00m00s Repositories loaded. Package Arch Version Repository Size Installing group/module packages: bash x86_64 5.2.32-1.fc41 fedora 8.2 MiB bzip2 x86_64 1.0.8-19.fc41 fedora 95.7 KiB coreutils x86_64 9.5-10.fc41 fedora 5.6 MiB cpio x86_64 2.15-2.fc41 fedora 1.1 MiB diffutils x86_64 3.10-8.fc41 fedora 1.6 MiB fedora-release-common noarch 41-0.21 fedora 19.4 KiB findutils x86_64 1:4.10.0-4.fc41 fedora 1.8 MiB gawk x86_64 5.3.0-4.fc41 fedora 1.7 MiB glibc-minimal-langpack x86_64 2.40-3.fc41 fedora 0.0 B grep x86_64 3.11-9.fc41 fedora 1.0 MiB gzip x86_64 1.13-2.fc41 fedora 389.0 KiB info x86_64 7.1-3.fc41 fedora 361.8 KiB patch x86_64 2.7.6-25.fc41 fedora 266.7 KiB redhat-rpm-config noarch 293-1.fc41 fedora 183.5 KiB rpm-build x86_64 4.20.0-1.fc41 fedora 194.3 KiB sed x86_64 4.9-3.fc41 fedora 861.5 KiB shadow-utils x86_64 2:4.15.1-12.fc41 fedora 4.1 MiB tar x86_64 2:1.35-4.fc41 fedora 2.9 MiB unzip x86_64 6.0-64.fc41 fedora 386.8 KiB util-linux x86_64 2.40.2-4.fc41 fedora 3.7 MiB which x86_64 2.21-42.fc41 fedora 80.2 KiB xz x86_64 1:5.6.2-2.fc41 fedora 1.2 MiB Installing dependencies: add-determinism x86_64 0.3.6-1.fc41 fedora 2.2 MiB alternatives x86_64 1.30-1.fc41 fedora 66.3 KiB ansible-srpm-macros noarch 1-16.fc41 fedora 35.7 KiB audit-libs x86_64 4.0.2-1.fc41 copr_base 331.4 KiB authselect x86_64 1.5.0-8.fc41 fedora 157.6 KiB authselect-libs x86_64 1.5.0-8.fc41 fedora 822.2 KiB basesystem noarch 11-21.fc41 fedora 0.0 B binutils x86_64 2.43.1-2.fc41 fedora 27.5 MiB build-reproducibility-srpm-macros noarch 0.3.6-1.fc41 fedora 735.0 B bzip2-libs x86_64 1.0.8-19.fc41 fedora 80.7 KiB ca-certificates noarch 2024.2.69_v8.0.401-1.0.fc41 fedora 2.4 MiB coreutils-common x86_64 9.5-10.fc41 fedora 11.2 MiB cracklib x86_64 2.9.11-6.fc41 fedora 238.9 KiB crypto-policies noarch 20241010-1.git8baf557.fc41 fedora 136.9 KiB curl x86_64 8.9.1-2.fc41 fedora 796.2 KiB cyrus-sasl-lib x86_64 2.1.28-27.fc41 fedora 2.3 MiB debugedit x86_64 5.0-17.fc41 fedora 199.3 KiB dwz x86_64 0.15-8.fc41 fedora 298.9 KiB ed x86_64 1.20.2-2.fc41 fedora 146.9 KiB efi-srpm-macros noarch 5-12.fc41 fedora 40.1 KiB elfutils x86_64 0.191-8.fc41 fedora 2.6 MiB elfutils-debuginfod-client x86_64 0.191-8.fc41 fedora 64.9 KiB elfutils-default-yama-scope noarch 0.191-8.fc41 fedora 1.8 KiB elfutils-libelf x86_64 0.191-8.fc41 fedora 1.2 MiB elfutils-libs x86_64 0.191-8.fc41 fedora 646.2 KiB fedora-gpg-keys noarch 41-0.5 fedora 126.4 KiB fedora-release noarch 41-0.21 fedora 0.0 B fedora-release-identity-basic noarch 41-0.21 fedora 684.0 B fedora-repos noarch 41-0.5 fedora 4.9 KiB file x86_64 5.45-7.fc41 fedora 103.5 KiB file-libs x86_64 5.45-7.fc41 fedora 9.9 MiB filesystem x86_64 3.18-23.fc41 fedora 106.0 B fonts-srpm-macros noarch 1:2.0.5-17.fc41 fedora 55.8 KiB forge-srpm-macros noarch 0.3.2-1.fc41 fedora 39.0 KiB fpc-srpm-macros noarch 1.3-13.fc41 fedora 144.0 B gdb-minimal x86_64 15.1-1.fc41 fedora 13.0 MiB gdbm x86_64 1:1.23-7.fc41 fedora 460.9 KiB gdbm-libs x86_64 1:1.23-7.fc41 fedora 121.9 KiB ghc-srpm-macros noarch 1.9.1-2.fc41 fedora 747.0 B glibc x86_64 2.40-3.fc41 fedora 6.7 MiB glibc-common x86_64 2.40-3.fc41 fedora 1.0 MiB glibc-gconv-extra x86_64 2.40-3.fc41 fedora 8.0 MiB gmp x86_64 1:6.3.0-2.fc41 fedora 811.4 KiB gnat-srpm-macros noarch 6-6.fc41 fedora 1.0 KiB go-srpm-macros noarch 3.6.0-3.fc41 fedora 60.8 KiB jansson x86_64 2.13.1-10.fc41 fedora 88.3 KiB kernel-srpm-macros noarch 1.0-24.fc41 fedora 1.9 KiB keyutils-libs x86_64 1.6.3-4.fc41 fedora 54.4 KiB krb5-libs x86_64 1.21.3-2.fc41 fedora 2.3 MiB libacl x86_64 2.3.2-2.fc41 fedora 40.0 KiB libarchive x86_64 3.7.4-3.fc41 fedora 922.6 KiB libattr x86_64 2.5.2-4.fc41 fedora 28.5 KiB libblkid x86_64 2.40.2-4.fc41 fedora 258.5 KiB libbrotli x86_64 1.1.0-5.fc41 fedora 837.6 KiB libcap x86_64 2.70-4.fc41 fedora 220.2 KiB libcap-ng x86_64 0.8.5-3.fc41 copr_base 69.1 KiB libcom_err x86_64 1.47.1-3.fc41 fedora 67.2 KiB libcurl x86_64 8.9.1-2.fc41 fedora 818.1 KiB libeconf x86_64 0.6.2-3.fc41 fedora 58.0 KiB libevent x86_64 2.1.12-14.fc41 fedora 895.7 KiB libfdisk x86_64 2.40.2-4.fc41 fedora 362.9 KiB libffi x86_64 3.4.6-3.fc41 fedora 86.4 KiB libgcc x86_64 14.2.1-3.fc41 fedora 274.6 KiB libgomp x86_64 14.2.1-3.fc41 fedora 523.5 KiB libidn2 x86_64 2.3.7-2.fc41 fedora 329.1 KiB libmount x86_64 2.40.2-4.fc41 fedora 351.8 KiB libnghttp2 x86_64 1.62.1-2.fc41 fedora 166.1 KiB libnsl2 x86_64 2.0.1-2.fc41 fedora 57.9 KiB libpkgconf x86_64 2.3.0-1.fc41 fedora 78.2 KiB libpsl x86_64 0.21.5-4.fc41 fedora 80.5 KiB libpwquality x86_64 1.4.5-11.fc41 fedora 417.8 KiB libselinux x86_64 3.7-7.fc41 copr_base 181.0 KiB libsemanage x86_64 3.7-4.fc41 copr_base 297.6 KiB libsepol x86_64 3.7-2.fc41 fedora 817.8 KiB libsmartcols x86_64 2.40.2-4.fc41 fedora 180.4 KiB libssh x86_64 0.10.6-8.fc41 fedora 513.3 KiB libssh-config noarch 0.10.6-8.fc41 fedora 277.0 B libstdc++ x86_64 14.2.1-3.fc41 fedora 2.8 MiB libtasn1 x86_64 4.19.0-9.fc41 fedora 175.7 KiB libtirpc x86_64 1.3.5-0.fc41 fedora 202.7 KiB libtool-ltdl x86_64 2.4.7-12.fc41 fedora 66.2 KiB libunistring x86_64 1.1-8.fc41 fedora 1.7 MiB libutempter x86_64 1.2.1-15.fc41 fedora 57.7 KiB libuuid x86_64 2.40.2-4.fc41 fedora 37.5 KiB libverto x86_64 0.3.2-9.fc41 fedora 29.5 KiB libxcrypt x86_64 4.4.36-7.fc41 fedora 266.8 KiB libxml2 x86_64 2.12.8-2.fc41 fedora 1.7 MiB libzstd x86_64 1.5.6-2.fc41 fedora 795.9 KiB lua-libs x86_64 5.4.6-6.fc41 fedora 285.0 KiB lua-srpm-macros noarch 1-14.fc41 fedora 1.3 KiB lz4-libs x86_64 1.10.0-1.fc41 fedora 145.5 KiB mpfr x86_64 4.2.1-5.fc41 fedora 832.1 KiB ncurses-base noarch 6.5-2.20240629.fc41 fedora 326.3 KiB ncurses-libs x86_64 6.5-2.20240629.fc41 fedora 975.2 KiB ocaml-srpm-macros noarch 10-3.fc41 fedora 1.9 KiB openblas-srpm-macros noarch 2-18.fc41 fedora 112.0 B openldap x86_64 2.6.8-5.fc41 fedora 644.2 KiB openssl-libs x86_64 1:3.2.2-9.fc41 fedora 7.8 MiB p11-kit x86_64 0.25.5-3.fc41 fedora 2.2 MiB p11-kit-trust x86_64 0.25.5-3.fc41 fedora 391.4 KiB package-notes-srpm-macros noarch 0.5-12.fc41 fedora 1.6 KiB pam x86_64 1.6.1-5.fc41 fedora 1.8 MiB pam-libs x86_64 1.6.1-5.fc41 fedora 139.0 KiB pcre2 x86_64 10.44-1.fc41.1 fedora 653.5 KiB pcre2-syntax noarch 10.44-1.fc41.1 fedora 251.6 KiB perl-srpm-macros noarch 1-56.fc41 fedora 861.0 B pkgconf x86_64 2.3.0-1.fc41 fedora 88.6 KiB pkgconf-m4 noarch 2.3.0-1.fc41 fedora 14.4 KiB pkgconf-pkg-config x86_64 2.3.0-1.fc41 fedora 989.0 B popt x86_64 1.19-7.fc41 fedora 136.9 KiB publicsuffix-list-dafsa noarch 20240107-4.fc41 fedora 67.5 KiB pyproject-srpm-macros noarch 1.15.1-1.fc41 fedora 1.9 KiB python-srpm-macros noarch 3.13-3.fc41 fedora 51.0 KiB qt5-srpm-macros noarch 5.15.15-1.fc41 fedora 500.0 B qt6-srpm-macros noarch 6.7.2-3.fc41 fedora 456.0 B readline x86_64 8.2-10.fc41 fedora 493.2 KiB rpm x86_64 4.20.0-1.fc41 fedora 3.1 MiB rpm-build-libs x86_64 4.20.0-1.fc41 fedora 206.7 KiB rpm-libs x86_64 4.20.0-1.fc41 fedora 725.9 KiB rpm-sequoia x86_64 1.7.0-2.fc41 fedora 2.4 MiB rust-srpm-macros noarch 26.3-3.fc41 fedora 4.8 KiB setup noarch 2.15.0-5.fc41 fedora 720.7 KiB sqlite-libs x86_64 3.46.1-1.fc41 fedora 1.4 MiB systemd-libs x86_64 256.7-1.fc41 fedora 2.0 MiB util-linux-core x86_64 2.40.2-4.fc41 fedora 1.5 MiB xxhash-libs x86_64 0.8.2-4.fc41 fedora 88.4 KiB xz-libs x86_64 1:5.6.2-2.fc41 fedora 214.4 KiB zig-srpm-macros noarch 1-3.fc41 fedora 1.1 KiB zip x86_64 3.0-41.fc41 fedora 703.2 KiB zlib-ng-compat x86_64 2.1.7-3.fc41 fedora 134.0 KiB zstd x86_64 1.5.6-2.fc41 fedora 1.7 MiB Installing groups: Buildsystem building group Transaction Summary: Installing: 153 packages Total size of inbound packages is 53 MiB. Need to download 0 B. After this operation, 180 MiB extra will be used (install 180 MiB, remove 0 B). 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Already downloaded -------------------------------------------------------------------------------- [153/153] Total 100% | 0.0 B/s | 0.0 B | 00m00s Running transaction Importing PGP key 0xE99D6AD1: UserID : "Fedora (41) " Fingerprint: 466CF2D8B60BC3057AA9453ED0622462E99D6AD1 From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-41-primary The key was successfully imported. [ 1/155] Verify package files 100% | 732.0 B/s | 153.0 B | 00m00s [ 2/155] Prepare transaction 100% | 1.8 KiB/s | 153.0 B | 00m00s [ 3/155] Installing libgcc-0:14.2.1-3. 100% | 134.9 MiB/s | 276.3 KiB | 00m00s [ 4/155] Installing libssh-config-0:0. 100% | 0.0 B/s | 816.0 B | 00m00s [ 5/155] Installing publicsuffix-list- 100% | 66.7 MiB/s | 68.3 KiB | 00m00s [ 6/155] Installing fedora-release-ide 100% | 918.0 KiB/s | 940.0 B | 00m00s [ 7/155] Installing fedora-gpg-keys-0: 100% | 18.7 MiB/s | 172.2 KiB | 00m00s [ 8/155] Installing fedora-repos-0:41- 100% | 5.6 MiB/s | 5.7 KiB | 00m00s [ 9/155] Installing fedora-release-com 100% | 11.6 MiB/s | 23.7 KiB | 00m00s [ 10/155] Installing fedora-release-0:4 100% | 0.0 B/s | 124.0 B | 00m00s [ 11/155] Installing setup-0:2.15.0-5.f 100% | 47.3 MiB/s | 726.1 KiB | 00m00s [ 12/155] Installing filesystem-0:3.18- 100% | 1.6 MiB/s | 212.5 KiB | 00m00s [ 13/155] Installing basesystem-0:11-21 100% | 0.0 B/s | 124.0 B | 00m00s [ 14/155] Installing 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| 430.1 KiB | 00m00s [114/155] Installing libnsl2-0:2.0.1-2. 100% | 28.8 MiB/s | 59.1 KiB | 00m00s [115/155] Installing pam-0:1.6.1-5.fc41 100% | 81.6 MiB/s | 1.9 MiB | 00m00s [116/155] Installing libssh-0:0.10.6-8. 100% | 167.8 MiB/s | 515.4 KiB | 00m00s [117/155] Installing rpm-sequoia-0:1.7. 100% | 295.9 MiB/s | 2.4 MiB | 00m00s [118/155] Installing rpm-libs-0:4.20.0- 100% | 177.6 MiB/s | 727.4 KiB | 00m00s [119/155] Installing rpm-build-libs-0:4 100% | 202.6 MiB/s | 207.5 KiB | 00m00s [120/155] Installing libevent-0:2.1.12- 100% | 219.6 MiB/s | 899.5 KiB | 00m00s [121/155] Installing openldap-0:2.6.8-5 100% | 158.2 MiB/s | 648.0 KiB | 00m00s [122/155] Installing libcurl-0:8.9.1-2. 100% | 200.0 MiB/s | 819.2 KiB | 00m00s [123/155] Installing elfutils-debuginfo 100% | 32.7 MiB/s | 66.9 KiB | 00m00s [124/155] Installing elfutils-0:0.191-8 100% | 232.7 MiB/s | 2.6 MiB | 00m00s [125/155] Installing binutils-0:2.43.1- 100% | 235.3 MiB/s | 27.5 MiB | 00m00s [126/155] Installing gdb-minimal-0:15.1 100% | 236.2 MiB/s | 13.0 MiB | 00m00s [127/155] Installing debugedit-0:5.0-17 100% | 65.8 MiB/s | 202.0 KiB | 00m00s [128/155] Installing curl-0:8.9.1-2.fc4 100% | 41.0 MiB/s | 798.6 KiB | 00m00s [129/155] Installing rpm-0:4.20.0-1.fc4 100% | 89.5 MiB/s | 2.5 MiB | 00m00s [130/155] Installing efi-srpm-macros-0: 100% | 40.2 MiB/s | 41.2 KiB | 00m00s [131/155] Installing lua-srpm-macros-0: 100% | 1.9 MiB/s | 1.9 KiB | 00m00s [132/155] Installing zig-srpm-macros-0: 100% | 1.6 MiB/s | 1.7 KiB | 00m00s [133/155] Installing rust-srpm-macros-0 100% | 5.4 MiB/s | 5.6 KiB | 00m00s [134/155] Installing qt6-srpm-macros-0: 100% | 0.0 B/s | 732.0 B | 00m00s [135/155] Installing qt5-srpm-macros-0: 100% | 0.0 B/s | 776.0 B | 00m00s [136/155] Installing perl-srpm-macros-0 100% | 0.0 B/s | 1.1 KiB | 00m00s [137/155] Installing package-notes-srpm 100% | 2.0 MiB/s | 2.0 KiB | 00m00s [138/155] Installing openblas-srpm-macr 100% | 0.0 B/s | 392.0 B | 00m00s [139/155] Installing ocaml-srpm-macros- 100% | 0.0 B/s | 2.2 KiB | 00m00s [140/155] Installing kernel-srpm-macros 100% | 0.0 B/s | 2.3 KiB | 00m00s [141/155] Installing gnat-srpm-macros-0 100% | 0.0 B/s | 1.3 KiB | 00m00s [142/155] Installing ghc-srpm-macros-0: 100% | 0.0 B/s | 1.0 KiB | 00m00s [143/155] Installing fpc-srpm-macros-0: 100% | 0.0 B/s | 420.0 B | 00m00s [144/155] Installing ansible-srpm-macro 100% | 35.4 MiB/s | 36.2 KiB | 00m00s [145/155] Installing fonts-srpm-macros- 100% | 55.7 MiB/s | 57.0 KiB | 00m00s [146/155] Installing forge-srpm-macros- 100% | 39.4 MiB/s | 40.4 KiB | 00m00s [147/155] Installing go-srpm-macros-0:3 100% | 60.5 MiB/s | 62.0 KiB | 00m00s [148/155] Installing python-srpm-macros 100% | 50.9 MiB/s | 52.2 KiB | 00m00s [149/155] Installing redhat-rpm-config- 100% | 61.9 MiB/s | 190.1 KiB | 00m00s [150/155] Installing rpm-build-0:4.20.0 100% | 49.5 MiB/s | 202.8 KiB | 00m00s [151/155] Installing pyproject-srpm-mac 100% | 1.2 MiB/s | 2.5 KiB | 00m00s [152/155] Installing util-linux-0:2.40. 100% | 93.7 MiB/s | 3.7 MiB | 00m00s [153/155] Installing authselect-0:1.5.0 100% | 39.5 MiB/s | 161.9 KiB | 00m00s [154/155] Installing which-0:2.21-42.fc 100% | 40.2 MiB/s | 82.4 KiB | 00m00s warning: posix.fork(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.wait(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.exec(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead [155/155] Installing info-0:7.1-3.fc41. 100% | 243.9 KiB/s | 362.2 KiB | 00m01s Warning: skipped PGP checks for 4 packages from repository: copr_base Complete! Finish: installing minimal buildroot with dnf5 Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: add-determinism-0.3.6-1.fc41.x86_64 alternatives-1.30-1.fc41.x86_64 ansible-srpm-macros-1-16.fc41.noarch audit-libs-4.0.2-1.fc41.x86_64 authselect-1.5.0-8.fc41.x86_64 authselect-libs-1.5.0-8.fc41.x86_64 basesystem-11-21.fc41.noarch bash-5.2.32-1.fc41.x86_64 binutils-2.43.1-2.fc41.x86_64 build-reproducibility-srpm-macros-0.3.6-1.fc41.noarch bzip2-1.0.8-19.fc41.x86_64 bzip2-libs-1.0.8-19.fc41.x86_64 ca-certificates-2024.2.69_v8.0.401-1.0.fc41.noarch coreutils-9.5-10.fc41.x86_64 coreutils-common-9.5-10.fc41.x86_64 cpio-2.15-2.fc41.x86_64 cracklib-2.9.11-6.fc41.x86_64 crypto-policies-20241010-1.git8baf557.fc41.noarch curl-8.9.1-2.fc41.x86_64 cyrus-sasl-lib-2.1.28-27.fc41.x86_64 debugedit-5.0-17.fc41.x86_64 diffutils-3.10-8.fc41.x86_64 dwz-0.15-8.fc41.x86_64 ed-1.20.2-2.fc41.x86_64 efi-srpm-macros-5-12.fc41.noarch elfutils-0.191-8.fc41.x86_64 elfutils-debuginfod-client-0.191-8.fc41.x86_64 elfutils-default-yama-scope-0.191-8.fc41.noarch elfutils-libelf-0.191-8.fc41.x86_64 elfutils-libs-0.191-8.fc41.x86_64 fedora-gpg-keys-41-0.5.noarch fedora-release-41-0.21.noarch fedora-release-common-41-0.21.noarch fedora-release-identity-basic-41-0.21.noarch fedora-repos-41-0.5.noarch file-5.45-7.fc41.x86_64 file-libs-5.45-7.fc41.x86_64 filesystem-3.18-23.fc41.x86_64 findutils-4.10.0-4.fc41.x86_64 fonts-srpm-macros-2.0.5-17.fc41.noarch forge-srpm-macros-0.3.2-1.fc41.noarch fpc-srpm-macros-1.3-13.fc41.noarch gawk-5.3.0-4.fc41.x86_64 gdb-minimal-15.1-1.fc41.x86_64 gdbm-1.23-7.fc41.x86_64 gdbm-libs-1.23-7.fc41.x86_64 ghc-srpm-macros-1.9.1-2.fc41.noarch glibc-2.40-3.fc41.x86_64 glibc-common-2.40-3.fc41.x86_64 glibc-gconv-extra-2.40-3.fc41.x86_64 glibc-minimal-langpack-2.40-3.fc41.x86_64 gmp-6.3.0-2.fc41.x86_64 gnat-srpm-macros-6-6.fc41.noarch go-srpm-macros-3.6.0-3.fc41.noarch gpg-pubkey-e99d6ad1-64d2612c grep-3.11-9.fc41.x86_64 gzip-1.13-2.fc41.x86_64 info-7.1-3.fc41.x86_64 jansson-2.13.1-10.fc41.x86_64 kernel-srpm-macros-1.0-24.fc41.noarch keyutils-libs-1.6.3-4.fc41.x86_64 krb5-libs-1.21.3-2.fc41.x86_64 libacl-2.3.2-2.fc41.x86_64 libarchive-3.7.4-3.fc41.x86_64 libattr-2.5.2-4.fc41.x86_64 libblkid-2.40.2-4.fc41.x86_64 libbrotli-1.1.0-5.fc41.x86_64 libcap-2.70-4.fc41.x86_64 libcap-ng-0.8.5-3.fc41.x86_64 libcom_err-1.47.1-3.fc41.x86_64 libcurl-8.9.1-2.fc41.x86_64 libeconf-0.6.2-3.fc41.x86_64 libevent-2.1.12-14.fc41.x86_64 libfdisk-2.40.2-4.fc41.x86_64 libffi-3.4.6-3.fc41.x86_64 libgcc-14.2.1-3.fc41.x86_64 libgomp-14.2.1-3.fc41.x86_64 libidn2-2.3.7-2.fc41.x86_64 libmount-2.40.2-4.fc41.x86_64 libnghttp2-1.62.1-2.fc41.x86_64 libnsl2-2.0.1-2.fc41.x86_64 libpkgconf-2.3.0-1.fc41.x86_64 libpsl-0.21.5-4.fc41.x86_64 libpwquality-1.4.5-11.fc41.x86_64 libselinux-3.7-7.fc41.x86_64 libsemanage-3.7-4.fc41.x86_64 libsepol-3.7-2.fc41.x86_64 libsmartcols-2.40.2-4.fc41.x86_64 libssh-0.10.6-8.fc41.x86_64 libssh-config-0.10.6-8.fc41.noarch libstdc++-14.2.1-3.fc41.x86_64 libtasn1-4.19.0-9.fc41.x86_64 libtirpc-1.3.5-0.fc41.x86_64 libtool-ltdl-2.4.7-12.fc41.x86_64 libunistring-1.1-8.fc41.x86_64 libutempter-1.2.1-15.fc41.x86_64 libuuid-2.40.2-4.fc41.x86_64 libverto-0.3.2-9.fc41.x86_64 libxcrypt-4.4.36-7.fc41.x86_64 libxml2-2.12.8-2.fc41.x86_64 libzstd-1.5.6-2.fc41.x86_64 lua-libs-5.4.6-6.fc41.x86_64 lua-srpm-macros-1-14.fc41.noarch lz4-libs-1.10.0-1.fc41.x86_64 mpfr-4.2.1-5.fc41.x86_64 ncurses-base-6.5-2.20240629.fc41.noarch ncurses-libs-6.5-2.20240629.fc41.x86_64 ocaml-srpm-macros-10-3.fc41.noarch openblas-srpm-macros-2-18.fc41.noarch openldap-2.6.8-5.fc41.x86_64 openssl-libs-3.2.2-9.fc41.x86_64 p11-kit-0.25.5-3.fc41.x86_64 p11-kit-trust-0.25.5-3.fc41.x86_64 package-notes-srpm-macros-0.5-12.fc41.noarch pam-1.6.1-5.fc41.x86_64 pam-libs-1.6.1-5.fc41.x86_64 patch-2.7.6-25.fc41.x86_64 pcre2-10.44-1.fc41.1.x86_64 pcre2-syntax-10.44-1.fc41.1.noarch perl-srpm-macros-1-56.fc41.noarch pkgconf-2.3.0-1.fc41.x86_64 pkgconf-m4-2.3.0-1.fc41.noarch pkgconf-pkg-config-2.3.0-1.fc41.x86_64 popt-1.19-7.fc41.x86_64 publicsuffix-list-dafsa-20240107-4.fc41.noarch pyproject-srpm-macros-1.15.1-1.fc41.noarch python-srpm-macros-3.13-3.fc41.noarch qt5-srpm-macros-5.15.15-1.fc41.noarch qt6-srpm-macros-6.7.2-3.fc41.noarch readline-8.2-10.fc41.x86_64 redhat-rpm-config-293-1.fc41.noarch rpm-4.20.0-1.fc41.x86_64 rpm-build-4.20.0-1.fc41.x86_64 rpm-build-libs-4.20.0-1.fc41.x86_64 rpm-libs-4.20.0-1.fc41.x86_64 rpm-sequoia-1.7.0-2.fc41.x86_64 rust-srpm-macros-26.3-3.fc41.noarch sed-4.9-3.fc41.x86_64 setup-2.15.0-5.fc41.noarch shadow-utils-4.15.1-12.fc41.x86_64 sqlite-libs-3.46.1-1.fc41.x86_64 systemd-libs-256.7-1.fc41.x86_64 tar-1.35-4.fc41.x86_64 unzip-6.0-64.fc41.x86_64 util-linux-2.40.2-4.fc41.x86_64 util-linux-core-2.40.2-4.fc41.x86_64 which-2.21-42.fc41.x86_64 xxhash-libs-0.8.2-4.fc41.x86_64 xz-5.6.2-2.fc41.x86_64 xz-libs-5.6.2-2.fc41.x86_64 zig-srpm-macros-1-3.fc41.noarch zip-3.0-41.fc41.x86_64 zlib-ng-compat-2.1.7-3.fc41.x86_64 zstd-1.5.6-2.fc41.x86_64 Start: buildsrpm Start: rpmbuild -bs Building target platforms: x86_64 Building for target x86_64 sh: line 1: python3-config: command not found sh: line 1: python3-config: command not found setting SOURCE_DATE_EPOCH=1725235200 Wrote: /builddir/build/SRPMS/libsedml-2.0.32-13.fc41.src.rpm Finish: rpmbuild -bs INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-41-x86_64-1729099389.469766/root/var/log/dnf5.log Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-f43ubg19/libsedml/libsedml.spec) Config(child) 0 minutes 20 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/libsedml-2.0.32-13.fc41.src.rpm) Config(fedora-41-x86_64) Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-41-x86_64-bootstrap-1729099389.469766/root. INFO: reusing tmpfs at /var/lib/mock/fedora-41-x86_64-bootstrap-1729099389.469766/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-41-x86_64-1729099389.469766/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.20.0-1.fc41.x86_64 rpm-sequoia-1.7.0-2.fc41.x86_64 dnf5-5.2.6.2-1.fc41.x86_64 dnf5-plugins-5.2.6.2-1.fc41.x86_64 Finish: chroot init Start: build phase for libsedml-2.0.32-13.fc41.src.rpm Start: build setup for libsedml-2.0.32-13.fc41.src.rpm Building target platforms: x86_64 Building for target x86_64 sh: line 1: python3-config: command not found sh: line 1: python3-config: command not found setting SOURCE_DATE_EPOCH=1725235200 Wrote: /builddir/build/SRPMS/libsedml-2.0.32-13.fc41.src.rpm Updating and loading repositories: fedora 100% | 808.2 KiB/s | 25.1 KiB | 00m00s updates 100% | 976.4 KiB/s | 28.3 KiB | 00m00s Copr repository 100% | 45.1 KiB/s | 1.5 KiB | 00m00s Repositories loaded. Package Arch Version Repository Size Installing: bzip2-devel x86_64 1.0.8-19.fc41 fedora 309.8 KiB check-devel x86_64 0.15.2-16.fc41 fedora 120.0 KiB cmake x86_64 3.28.3-7.fc41 fedora 31.6 MiB gcc x86_64 14.2.1-3.fc41 fedora 104.3 MiB gcc-c++ x86_64 14.2.1-3.fc41 fedora 38.2 MiB libnuml-devel x86_64 1.1.4-19.fc41 copr_base 307.6 KiB libsbml-devel x86_64 5.20.4-1.fc41 copr_base 36.6 MiB libxml2-devel x86_64 2.12.8-2.fc41 fedora 3.4 MiB minizip-ng-compat-devel x86_64 4.0.7-1.fc41 fedora 86.5 KiB python3-devel x86_64 3.13.0-1.fc41 fedora 1.8 MiB swig x86_64 4.3.0-1.fc41 copr_base 6.2 MiB xerces-c-devel x86_64 3.2.5-5.fc41 fedora 4.1 MiB zlib-ng-compat-devel x86_64 2.1.7-3.fc41 fedora 106.8 KiB Installing dependencies: annobin-docs noarch 12.69-1.fc41 fedora 97.7 KiB annobin-plugin-gcc x86_64 12.69-1.fc41 fedora 985.0 KiB check x86_64 0.15.2-16.fc41 fedora 146.0 KiB check-static x86_64 0.15.2-16.fc41 fedora 115.6 KiB cmake-data noarch 3.28.3-7.fc41 fedora 8.0 MiB cmake-filesystem x86_64 3.28.3-7.fc41 fedora 0.0 B cmake-rpm-macros noarch 3.28.3-7.fc41 fedora 7.5 KiB cpp x86_64 14.2.1-3.fc41 fedora 35.0 MiB emacs-filesystem noarch 1:30.0-3.fc41 fedora 0.0 B expat x86_64 2.6.3-1.fc41 fedora 291.5 KiB gcc-plugin-annobin x86_64 14.2.1-3.fc41 fedora 61.1 KiB glibc-devel x86_64 2.40-3.fc41 fedora 35.0 KiB glibc-headers-x86 noarch 2.40-3.fc41 fedora 2.2 MiB jsoncpp x86_64 1.9.5-8.fc41 fedora 253.4 KiB kernel-headers x86_64 6.11.3-300.fc41 fedora 6.4 MiB libb2 x86_64 0.98.1-12.fc41 fedora 42.2 KiB libmpc x86_64 1.3.1-6.fc41 fedora 164.7 KiB libnuml x86_64 1.1.4-19.fc41 copr_base 278.1 KiB libsbml x86_64 5.20.4-1.fc41 copr_base 9.7 MiB libstdc++-devel x86_64 14.2.1-3.fc41 fedora 15.4 MiB libuv x86_64 1:1.49.0-1.fc41 fedora 563.6 KiB libxcrypt-devel x86_64 4.4.36-7.fc41 fedora 30.3 KiB make x86_64 1:4.4.1-8.fc41 fedora 1.8 MiB minizip-ng-compat x86_64 4.0.7-1.fc41 fedora 158.6 KiB mpdecimal x86_64 2.5.1-16.fc41 fedora 204.9 KiB pyproject-rpm-macros noarch 1.15.1-1.fc41 fedora 109.2 KiB python-pip-wheel noarch 24.2-1.fc41 fedora 1.2 MiB python-rpm-macros noarch 3.13-3.fc41 fedora 22.1 KiB python3 x86_64 3.13.0-1.fc41 fedora 31.8 KiB python3-libs x86_64 3.13.0-1.fc41 fedora 40.3 MiB python3-packaging noarch 24.1-2.fc41 fedora 422.3 KiB python3-rpm-generators noarch 14-11.fc41 fedora 81.7 KiB python3-rpm-macros noarch 3.13-3.fc41 fedora 6.4 KiB rhash x86_64 1.4.4-2.fc41 fedora 349.9 KiB subunit x86_64 1.4.4-4.fc41 fedora 71.0 KiB subunit-devel x86_64 1.4.4-4.fc41 fedora 5.3 KiB tzdata noarch 2024a-9.fc41 fedora 1.7 MiB vim-filesystem noarch 2:9.1.737-1.fc41 fedora 40.0 B xerces-c x86_64 3.2.5-5.fc41 fedora 3.6 MiB xz-devel x86_64 1:5.6.2-2.fc41 fedora 255.6 KiB Transaction Summary: Installing: 53 packages Total size of inbound packages is 105 MiB. Need to download 354 KiB. After this operation, 357 MiB extra will be used (install 357 MiB, remove 0 B). [1/1] gcc-0:14.2.1-3.fc41.x86_64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [1/1] Total 100% | 0.0 B/s | 0.0 B | 00m00s [1/2] bzip2-devel-0:1.0.8-19.fc41.x86_6 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [2/2] Total 100% | 0.0 B/s | 0.0 B | 00m00s [1/4] cmake-0:3.28.3-7.fc41.x86_64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [2/5] gcc-c++-0:14.2.1-3.fc41.x86_64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [3/7] libsbml-devel-0:5.20.4-1.fc41.x86 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [4/8] libxml2-devel-0:2.12.8-2.fc41.x86 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [5/9] minizip-ng-compat-devel-0:4.0.7-1 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 6/10] python3-devel-0:3.13.0-1.fc41.x 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 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packages from repository: copr_base Complete! Finish: build setup for libsedml-2.0.32-13.fc41.src.rpm Start: rpmbuild libsedml-2.0.32-13.fc41.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1725235200 Executing(%mkbuilddir): /bin/sh -e /var/tmp/rpm-tmp.zhXZzu + umask 022 + cd /builddir/build/BUILD/libsedml-2.0.32-build + test -d /builddir/build/BUILD/libsedml-2.0.32-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/libsedml-2.0.32-build + /usr/bin/rm -rf /builddir/build/BUILD/libsedml-2.0.32-build + /usr/bin/mkdir -p /builddir/build/BUILD/libsedml-2.0.32-build + /usr/bin/mkdir -p /builddir/build/BUILD/libsedml-2.0.32-build/SPECPARTS + RPM_EC=0 ++ jobs -p + exit 0 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.sVfk1b + umask 022 + cd /builddir/build/BUILD/libsedml-2.0.32-build + cd /builddir/build/BUILD/libsedml-2.0.32-build + rm -rf libSEDML-2.0.32 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/libSEDML-2.0.32.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd libSEDML-2.0.32 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + sed -e 's| lib/cmake | lib64/cmake |g' -i CMakeLists.txt + sed -e 's| /usr/lib/cmake | /usr/lib64/cmake |g' -i CMakeModules/FindLIBNUML.cmake + sed -e 's| /usr/lib/cmake | /usr/lib64/cmake |g' -i CMakeModules/FindLIBSBML.cmake Patch #0 (libsedml-2.0-fix_install_libpaths.patch): + echo 'Patch #0 (libsedml-2.0-fix_install_libpaths.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p1 -b --suffix .fix_install_libpaths --fuzz=0 patching file CMakeLists.txt Hunk #1 succeeded at 722 (offset -43 lines). patching file src/bindings/ruby/CMakeLists.txt Hunk #1 succeeded at 128 (offset 12 lines). patching file src/bindings/csharp/CMakeLists.txt Hunk #1 succeeded at 96 (offset -30 lines). patching file src/bindings/perl/CMakeLists.txt Hunk #1 succeeded at 118 (offset 5 lines). patching file src/bindings/java/CMakeLists.txt Hunk #1 succeeded at 56 (offset -28 lines). + echo 'Patch #1 (libsedml-2.0-porting_to_python310.patch):' Patch #1 (libsedml-2.0-porting_to_python310.patch): + /usr/bin/patch --no-backup-if-mismatch -f -p1 -b --suffix .porting_to_python310 --fuzz=0 patching file src/bindings/python/CMakeLists.txt + echo 'Patch #2 (libsedml-2.0-Fixes-for-swig-4.1.0-macro-definition-correction.patch):' Patch #2 (libsedml-2.0-Fixes-for-swig-4.1.0-macro-definition-correction.patch): + /usr/bin/patch --no-backup-if-mismatch -f -p1 -b --suffix .fix_macro_definition --fuzz=0 patching file src/bindings/csharp/CMakeLists.txt patching file src/bindings/java/CMakeLists.txt patching file src/bindings/perl/CMakeLists.txt patching file src/bindings/python/CMakeLists.txt patching file src/bindings/ruby/CMakeLists.txt + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.VSGohd + umask 022 + cd /builddir/build/BUILD/libsedml-2.0.32-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd libSEDML-2.0.32 + mkdir -p build + export 'LDFLAGS=-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -lpthread' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -lpthread' + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -lpthread' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX ++ pkg-config --cflags libxml-2.0 + /usr/bin/cmake -S . -B redhat-linux-build -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_DO_STRIP:BOOL=OFF -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -B build -Wno-dev -DWITH_PYTHON:BOOL=ON -DWITH_SWIG:BOOL=ON -DPYTHON_EXECUTABLE:FILEPATH=/usr/bin/python3 -DPYTHON_INCLUDE_DIR:PATH=/usr/include/python3.13 -DPYTHON_LIBRARY:FILEPATH=/usr/lib64/libpython3.13.so -DCSHARP_COMPILER:FILEPATH=/usr/bin/mcs -DWITH_CHECK:BOOL=ON -DWITH_EXAMPLES:BOOL=OFF -DLIBSBML_LIBRARY:FILEPATH=/usr/lib64/libsbml.so -DLIBSBML_INCLUDE_DIR:PATH=/usr/include -DCMAKE_BUILD_TYPE:STRING=Release -DCMAKE_INSTALL_LIBDIR:PATH=/usr/lib64 -DCMAKE_INSTALL_PREFIX:PATH=/usr -DLIBSEDML_SHARED_VERSION:BOOL=ON '-DEXTRA_LIBS:STRING=numl;sbml;xml2;bz2;z;m;dl' -DLIBSBML_STATIC:BOOL=OFF '-DCMAKE_CXX_FLAGS_RELEASE:STRING=-I/usr/include/libxml2 -DWITH_GZFILEOP' -DCMAKE_VERBOSE_MAKEFILE:BOOL=TRUE -DCMAKE_COLOR_MAKEFILE:BOOL=ON -DCPACK_BINARY_TZ:BOOL=OFF -DCPACK_BINARY_TGZ:BOOL=OFF -DCPACK_SOURCE_TBZ2:BOOL=OFF -DCPACK_SOURCE_TGZ:BOOL=OFF -DCPACK_SOURCE_TZ:BOOL=OFF -DWITH_ZLIB:BOOL=ON -DWITH_CPP_NAMESPACE:BOOL=OFF -DCMAKE_SKIP_RPATH:BOOL=YES -DCMAKE_SKIP_INSTALL_RPATH:BOOL=YES -- The CXX compiler identification is GNU 14.2.1 -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Check for working CXX compiler: /usr/bin/g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found LIBSBML: sbml-static (found version "5.20.4") -- Found LIBNUML: numl-static (found version "1.1.4") -- Looking for gzopen in /usr/lib64/libz.so -- Looking for gzopen in /usr/lib64/libz.so - found -- Looking for include file check.h -- Looking for include file check.h - found -- Looking for include file expat.h -- Looking for include file expat.h - not found -- Looking for include file errno.h -- Looking for include file errno.h - found -- Looking for include file math.h -- Looking for include file math.h - found -- Looking for include file sys/types.h -- Looking for include file sys/types.h - found -- Looking for include file float.h -- Looking for include file float.h - found -- Looking for sqrt in m -- Looking for sqrt in m - found -- Found SWIG: /usr/bin/swig (found version "4.3.0") -- Found PythonInterp: /usr/bin/python3 (found version "3.13") -- Found PythonLibs: /usr/lib64/libpython3.13.so (found version "3.13.0") -- ---------------------------------------------------------------------- libSEDML version 2.0.32 ---------------------------------------------------------------------- More information and the latest version are available online at https://github.com/fbergmann/libSEDML/ Please report problems using the issue tracker at https://github.com/fbergmann/libSEDML/issues To contact the developers directly, email fbergman@caltech.edu Configured on host 'unknown' host type = Linux host operating system = Linux 6.6.13-200.fc39.x86_64 host CPU architecture = x86_64 General build flags: CC = CXX = /usr/bin/g++ CPPFLAGS = -DLINUX -DPACKAGE_VERSION="2.0.32" -DPACKAGE_NAME="libsedml" CFLAGS = -fno-strict-aliasing -fPIC CXXFLAGS = -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC LDFLAGS = -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -lpthread SBML library configuration: SBML library = /usr/lib64/libsbml.so SBML include = -I/usr/include NUML library configuration: NUML library = /lib64/libnuml.so NUML include = -I/usr/include Other libSEDML configuration settings: Installation $prefix = /usr -- Value of $LD_LIBRARY_PATH = -- Using SWIG = /usr/bin/swig -- Using Python = /usr/bin/python3 -- Using libcheck = -- -- Using C++ namespace for libSEDML (libsedml) = no -- ---------------------------------------------------------------------- -- Configuring done (2.1s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_C_FLAGS_RELEASE CMAKE_Fortran_FLAGS_RELEASE CMAKE_INSTALL_DO_STRIP CMAKE_SKIP_INSTALL_RPATH CSHARP_COMPILER INCLUDE_INSTALL_DIR LIBSBML_STATIC LIB_INSTALL_DIR LIB_SUFFIX SHARE_INSTALL_PREFIX SYSCONF_INSTALL_DIR -- Build files have been written to: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build + /usr/bin/make -O -j2 V=1 VERBOSE=1 -C build make: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /usr/bin/cmake -S/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32 -B/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build --check-build-system CMakeFiles/Makefile.cmake 0 make: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/CMakeFiles /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build//CMakeFiles/progress.marks make: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /usr/bin/make -f CMakeFiles/Makefile2 all /usr/bin/make -f src/sedml/CMakeFiles/sedml.dir/build.make src/sedml/CMakeFiles/sedml.dir/depend /usr/bin/make -f src/sedml/CMakeFiles/sedml-static.dir/build.make src/sedml/CMakeFiles/sedml-static.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32 /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/CMakeFiles/sedml.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /usr/bin/make -f src/sedml/CMakeFiles/sedml.dir/build.make src/sedml/CMakeFiles/sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32 /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/CMakeFiles/sedml-static.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /usr/bin/make -f src/sedml/CMakeFiles/sedml-static.dir/build.make src/sedml/CMakeFiles/sedml-static.dir/build make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 0%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/common/SedOperationReturnValues.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/common/SedOperationReturnValues.cpp.o -MF CMakeFiles/sedml-static.dir/common/SedOperationReturnValues.cpp.o.d -o CMakeFiles/sedml-static.dir/common/SedOperationReturnValues.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/common/SedOperationReturnValues.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 0%] Building CXX object src/sedml/CMakeFiles/sedml.dir/common/SedOperationReturnValues.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/common/SedOperationReturnValues.cpp.o -MF CMakeFiles/sedml.dir/common/SedOperationReturnValues.cpp.o.d -o CMakeFiles/sedml.dir/common/SedOperationReturnValues.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/common/SedOperationReturnValues.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 0%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/common/SedmlEnumerations.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/common/SedmlEnumerations.cpp.o -MF CMakeFiles/sedml-static.dir/common/SedmlEnumerations.cpp.o.d -o CMakeFiles/sedml-static.dir/common/SedmlEnumerations.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/common/SedmlEnumerations.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 1%] Building CXX object src/sedml/CMakeFiles/sedml.dir/common/SedmlEnumerations.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/common/SedmlEnumerations.cpp.o -MF CMakeFiles/sedml.dir/common/SedmlEnumerations.cpp.o.d -o CMakeFiles/sedml.dir/common/SedmlEnumerations.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/common/SedmlEnumerations.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 2%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/common/libsedml-version.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/common/libsedml-version.cpp.o -MF CMakeFiles/sedml-static.dir/common/libsedml-version.cpp.o.d -o CMakeFiles/sedml-static.dir/common/libsedml-version.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/common/libsedml-version.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 2%] Building CXX object src/sedml/CMakeFiles/sedml.dir/common/libsedml-version.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/common/libsedml-version.cpp.o -MF CMakeFiles/sedml.dir/common/libsedml-version.cpp.o.d -o CMakeFiles/sedml.dir/common/libsedml-version.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/common/libsedml-version.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 3%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedAbstractCurve.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedAbstractCurve.cpp.o -MF CMakeFiles/sedml-static.dir/SedAbstractCurve.cpp.o.d -o CMakeFiles/sedml-static.dir/SedAbstractCurve.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedAbstractCurve.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 3%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedAbstractCurve.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedAbstractCurve.cpp.o -MF CMakeFiles/sedml.dir/SedAbstractCurve.cpp.o.d -o CMakeFiles/sedml.dir/SedAbstractCurve.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedAbstractCurve.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 4%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedAbstractTask.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedAbstractTask.cpp.o -MF CMakeFiles/sedml-static.dir/SedAbstractTask.cpp.o.d -o CMakeFiles/sedml-static.dir/SedAbstractTask.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedAbstractTask.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedAbstractTask.cpp: In member function ‘virtual void SedAbstractTask::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedAbstractTask.cpp:508:8: warning: unused variable ‘assigned’ [-Wunused-variable] 508 | bool assigned = false; | ^~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 4%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedAbstractTask.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedAbstractTask.cpp.o -MF CMakeFiles/sedml.dir/SedAbstractTask.cpp.o.d -o CMakeFiles/sedml.dir/SedAbstractTask.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedAbstractTask.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedAbstractTask.cpp: In member function ‘virtual void SedAbstractTask::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedAbstractTask.cpp:508:8: warning: unused variable ‘assigned’ [-Wunused-variable] 508 | bool assigned = false; | ^~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 5%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedAddXML.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedAddXML.cpp.o -MF CMakeFiles/sedml-static.dir/SedAddXML.cpp.o.d -o CMakeFiles/sedml-static.dir/SedAddXML.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedAddXML.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedAddXML.cpp: In member function ‘virtual void SedAddXML::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedAddXML.cpp:582:8: warning: unused variable ‘assigned’ [-Wunused-variable] 582 | bool assigned = false; | ^~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 5%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedAddXML.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedAddXML.cpp.o -MF CMakeFiles/sedml.dir/SedAddXML.cpp.o.d -o CMakeFiles/sedml.dir/SedAddXML.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedAddXML.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedAddXML.cpp: In member function ‘virtual void SedAddXML::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedAddXML.cpp:582:8: warning: unused variable ‘assigned’ [-Wunused-variable] 582 | bool assigned = false; | ^~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 6%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedAdjustableParameter.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedAdjustableParameter.cpp.o -MF CMakeFiles/sedml-static.dir/SedAdjustableParameter.cpp.o.d -o CMakeFiles/sedml-static.dir/SedAdjustableParameter.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedAdjustableParameter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 5%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedAdjustableParameter.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedAdjustableParameter.cpp.o -MF CMakeFiles/sedml.dir/SedAdjustableParameter.cpp.o.d -o CMakeFiles/sedml.dir/SedAdjustableParameter.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedAdjustableParameter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 6%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedAlgorithm.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedAlgorithm.cpp.o -MF CMakeFiles/sedml-static.dir/SedAlgorithm.cpp.o.d -o CMakeFiles/sedml-static.dir/SedAlgorithm.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedAlgorithm.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 7%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedAlgorithm.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedAlgorithm.cpp.o -MF CMakeFiles/sedml.dir/SedAlgorithm.cpp.o.d -o CMakeFiles/sedml.dir/SedAlgorithm.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedAlgorithm.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 8%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedAlgorithmParameter.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedAlgorithmParameter.cpp.o -MF CMakeFiles/sedml-static.dir/SedAlgorithmParameter.cpp.o.d -o CMakeFiles/sedml-static.dir/SedAlgorithmParameter.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedAlgorithmParameter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 8%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedAlgorithmParameter.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedAlgorithmParameter.cpp.o -MF CMakeFiles/sedml.dir/SedAlgorithmParameter.cpp.o.d -o CMakeFiles/sedml.dir/SedAlgorithmParameter.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedAlgorithmParameter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 8%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedAnalysis.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedAnalysis.cpp.o -MF CMakeFiles/sedml-static.dir/SedAnalysis.cpp.o.d -o CMakeFiles/sedml-static.dir/SedAnalysis.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedAnalysis.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedAnalysis.cpp: In member function ‘virtual void SedAnalysis::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedAnalysis.cpp:458:8: warning: unused variable ‘assigned’ [-Wunused-variable] 458 | bool assigned = false; | ^~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 9%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedAnalysis.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedAnalysis.cpp.o -MF CMakeFiles/sedml.dir/SedAnalysis.cpp.o.d -o CMakeFiles/sedml.dir/SedAnalysis.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedAnalysis.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedAnalysis.cpp: In member function ‘virtual void SedAnalysis::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedAnalysis.cpp:458:8: warning: unused variable ‘assigned’ [-Wunused-variable] 458 | bool assigned = false; | ^~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 10%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedAppliedDimension.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedAppliedDimension.cpp.o -MF CMakeFiles/sedml-static.dir/SedAppliedDimension.cpp.o.d -o CMakeFiles/sedml-static.dir/SedAppliedDimension.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedAppliedDimension.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 10%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedAppliedDimension.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedAppliedDimension.cpp.o -MF CMakeFiles/sedml.dir/SedAppliedDimension.cpp.o.d -o CMakeFiles/sedml.dir/SedAppliedDimension.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedAppliedDimension.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 10%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedAxis.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedAxis.cpp.o -MF CMakeFiles/sedml-static.dir/SedAxis.cpp.o.d -o CMakeFiles/sedml-static.dir/SedAxis.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedAxis.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 11%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedAxis.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedAxis.cpp.o -MF CMakeFiles/sedml.dir/SedAxis.cpp.o.d -o CMakeFiles/sedml.dir/SedAxis.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedAxis.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 12%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedBase.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedBase.cpp.o -MF CMakeFiles/sedml-static.dir/SedBase.cpp.o.d -o CMakeFiles/sedml-static.dir/SedBase.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedBase.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedBase.cpp: In member function ‘bool SedBase::hasValidLevelVersionNamespaceCombination(int, XMLNamespaces*)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedBase.cpp:1886:8: warning: variable ‘sedmlDeclared’ set but not used [-Wunused-but-set-variable] 1886 | bool sedmlDeclared = false; | ^~~~~~~~~~~~~ /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedBase.cpp: In member function ‘void SedBase::read(XMLInputStream&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedBase.cpp:2206:19: warning: variable ‘position’ set but not used [-Wunused-but-set-variable] 2206 | int position = 0; | ^~~~~~~~ In member function ‘SedBase::setAnnotation(XMLNode*)’, inlined from ‘SedBase::unsetAnnotation()’ at /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedBase.cpp:1719:23: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedBase.cpp:740:36: warning: ‘this’ pointer is null [-Wnonnull] 740 | mAnnotation = annotation->clone(); | ~~~~~~~~~~~~~~~~~^~ In file included from /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedBase.cpp:44: /usr/include/sbml/xml/XMLNode.h: In member function ‘SedBase::unsetAnnotation()’: /usr/include/sbml/xml/XMLNode.h:300:12: note: in a call to non-static member function ‘XMLNode::clone() const’ 300 | XMLNode* clone () const; | ^~~~~ make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 12%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedBase.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedBase.cpp.o -MF CMakeFiles/sedml.dir/SedBase.cpp.o.d -o CMakeFiles/sedml.dir/SedBase.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedBase.cpp /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedBase.cpp: In member function ‘bool SedBase::hasValidLevelVersionNamespaceCombination(int, XMLNamespaces*)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedBase.cpp:1886:8: warning: variable ‘sedmlDeclared’ set but not used [-Wunused-but-set-variable] 1886 | bool sedmlDeclared = false; | ^~~~~~~~~~~~~ /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedBase.cpp: In member function ‘void SedBase::read(XMLInputStream&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedBase.cpp:2206:19: warning: variable ‘position’ set but not used [-Wunused-but-set-variable] 2206 | int position = 0; | ^~~~~~~~ In member function ‘SedBase::setAnnotation(XMLNode*)’, inlined from ‘SedBase::unsetAnnotation()’ at /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedBase.cpp:1719:23: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedBase.cpp:740:36: warning: ‘this’ pointer is null [-Wnonnull] 740 | mAnnotation = annotation->clone(); | ~~~~~~~~~~~~~~~~~^~ In file included from /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedBase.cpp:44: /usr/include/sbml/xml/XMLNode.h: In member function ‘SedBase::unsetAnnotation()’: /usr/include/sbml/xml/XMLNode.h:300:12: note: in a call to non-static member function ‘XMLNode::clone() const’ 300 | XMLNode* clone () const; | ^~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 12%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedBounds.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedBounds.cpp.o -MF CMakeFiles/sedml-static.dir/SedBounds.cpp.o.d -o CMakeFiles/sedml-static.dir/SedBounds.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedBounds.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 13%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedBounds.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedBounds.cpp.o -MF CMakeFiles/sedml.dir/SedBounds.cpp.o.d -o CMakeFiles/sedml.dir/SedBounds.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedBounds.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 14%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedChange.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedChange.cpp.o -MF CMakeFiles/sedml.dir/SedChange.cpp.o.d -o CMakeFiles/sedml.dir/SedChange.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedChange.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 14%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedChange.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedChange.cpp.o -MF CMakeFiles/sedml-static.dir/SedChange.cpp.o.d -o CMakeFiles/sedml-static.dir/SedChange.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedChange.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 15%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedChangeAttribute.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedChangeAttribute.cpp.o -MF CMakeFiles/sedml.dir/SedChangeAttribute.cpp.o.d -o CMakeFiles/sedml.dir/SedChangeAttribute.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedChangeAttribute.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 15%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedChangeAttribute.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedChangeAttribute.cpp.o -MF CMakeFiles/sedml-static.dir/SedChangeAttribute.cpp.o.d -o CMakeFiles/sedml-static.dir/SedChangeAttribute.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedChangeAttribute.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 15%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedChangeXML.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedChangeXML.cpp.o -MF CMakeFiles/sedml.dir/SedChangeXML.cpp.o.d -o CMakeFiles/sedml.dir/SedChangeXML.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedChangeXML.cpp /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedChangeXML.cpp: In member function ‘virtual void SedChangeXML::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedChangeXML.cpp:582:8: warning: unused variable ‘assigned’ [-Wunused-variable] 582 | bool assigned = false; | ^~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 16%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedChangeXML.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedChangeXML.cpp.o -MF CMakeFiles/sedml-static.dir/SedChangeXML.cpp.o.d -o CMakeFiles/sedml-static.dir/SedChangeXML.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedChangeXML.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedChangeXML.cpp: In member function ‘virtual void SedChangeXML::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedChangeXML.cpp:582:8: warning: unused variable ‘assigned’ [-Wunused-variable] 582 | bool assigned = false; | ^~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 17%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedComputeChange.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedComputeChange.cpp.o -MF CMakeFiles/sedml.dir/SedComputeChange.cpp.o.d -o CMakeFiles/sedml.dir/SedComputeChange.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedComputeChange.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 17%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedComputeChange.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedComputeChange.cpp.o -MF CMakeFiles/sedml-static.dir/SedComputeChange.cpp.o.d -o CMakeFiles/sedml-static.dir/SedComputeChange.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedComputeChange.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 17%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedConstructorException.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedConstructorException.cpp.o -MF CMakeFiles/sedml.dir/SedConstructorException.cpp.o.d -o CMakeFiles/sedml.dir/SedConstructorException.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedConstructorException.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 18%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedConstructorException.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedConstructorException.cpp.o -MF CMakeFiles/sedml-static.dir/SedConstructorException.cpp.o.d -o CMakeFiles/sedml-static.dir/SedConstructorException.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedConstructorException.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 19%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedCurve.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedCurve.cpp.o -MF CMakeFiles/sedml.dir/SedCurve.cpp.o.d -o CMakeFiles/sedml.dir/SedCurve.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedCurve.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 19%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedCurve.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedCurve.cpp.o -MF CMakeFiles/sedml-static.dir/SedCurve.cpp.o.d -o CMakeFiles/sedml-static.dir/SedCurve.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedCurve.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 19%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedDataDescription.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedDataDescription.cpp.o -MF CMakeFiles/sedml.dir/SedDataDescription.cpp.o.d -o CMakeFiles/sedml.dir/SedDataDescription.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedDataDescription.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 20%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedDataDescription.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedDataDescription.cpp.o -MF CMakeFiles/sedml-static.dir/SedDataDescription.cpp.o.d -o CMakeFiles/sedml-static.dir/SedDataDescription.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedDataDescription.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 21%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedDataGenerator.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedDataGenerator.cpp.o -MF CMakeFiles/sedml.dir/SedDataGenerator.cpp.o.d -o CMakeFiles/sedml.dir/SedDataGenerator.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedDataGenerator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedDataGenerator.cpp: In member function ‘virtual void SedDataGenerator::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedDataGenerator.cpp:1192:8: warning: unused variable ‘assigned’ [-Wunused-variable] 1192 | bool assigned = false; | ^~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 21%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedDataGenerator.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedDataGenerator.cpp.o -MF CMakeFiles/sedml-static.dir/SedDataGenerator.cpp.o.d -o CMakeFiles/sedml-static.dir/SedDataGenerator.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedDataGenerator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedDataGenerator.cpp: In member function ‘virtual void SedDataGenerator::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedDataGenerator.cpp:1192:8: warning: unused variable ‘assigned’ [-Wunused-variable] 1192 | bool assigned = false; | ^~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 21%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedDataRange.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedDataRange.cpp.o -MF CMakeFiles/sedml.dir/SedDataRange.cpp.o.d -o CMakeFiles/sedml.dir/SedDataRange.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedDataRange.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 22%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedDataRange.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedDataRange.cpp.o -MF CMakeFiles/sedml-static.dir/SedDataRange.cpp.o.d -o CMakeFiles/sedml-static.dir/SedDataRange.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedDataRange.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 22%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedDataSet.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedDataSet.cpp.o -MF CMakeFiles/sedml.dir/SedDataSet.cpp.o.d -o CMakeFiles/sedml.dir/SedDataSet.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedDataSet.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 22%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedDataSet.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedDataSet.cpp.o -MF CMakeFiles/sedml-static.dir/SedDataSet.cpp.o.d -o CMakeFiles/sedml-static.dir/SedDataSet.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedDataSet.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 23%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedDataSource.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedDataSource.cpp.o -MF CMakeFiles/sedml.dir/SedDataSource.cpp.o.d -o CMakeFiles/sedml.dir/SedDataSource.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedDataSource.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 24%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedDataSource.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedDataSource.cpp.o -MF CMakeFiles/sedml-static.dir/SedDataSource.cpp.o.d -o CMakeFiles/sedml-static.dir/SedDataSource.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedDataSource.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 24%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedDocument.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedDocument.cpp.o -MF CMakeFiles/sedml.dir/SedDocument.cpp.o.d -o CMakeFiles/sedml.dir/SedDocument.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedDocument.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedDocument.cpp: In member function ‘virtual void SedDocument::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedDocument.cpp:3077:8: warning: unused variable ‘assigned’ [-Wunused-variable] 3077 | bool assigned = false; | ^~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 25%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedElementFilter.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedElementFilter.cpp.o -MF CMakeFiles/sedml.dir/SedElementFilter.cpp.o.d -o CMakeFiles/sedml.dir/SedElementFilter.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedElementFilter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 24%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedDocument.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedDocument.cpp.o -MF CMakeFiles/sedml-static.dir/SedDocument.cpp.o.d -o CMakeFiles/sedml-static.dir/SedDocument.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedDocument.cpp /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedDocument.cpp: In member function ‘virtual void SedDocument::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedDocument.cpp:3077:8: warning: unused variable ‘assigned’ [-Wunused-variable] 3077 | bool assigned = false; | ^~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 25%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedElementFilter.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedElementFilter.cpp.o -MF CMakeFiles/sedml-static.dir/SedElementFilter.cpp.o.d -o CMakeFiles/sedml-static.dir/SedElementFilter.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedElementFilter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 25%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedError.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedError.cpp.o -MF CMakeFiles/sedml.dir/SedError.cpp.o.d -o CMakeFiles/sedml.dir/SedError.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedError.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 26%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedError.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedError.cpp.o -MF CMakeFiles/sedml-static.dir/SedError.cpp.o.d -o CMakeFiles/sedml-static.dir/SedError.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedError.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 27%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedErrorLog.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedErrorLog.cpp.o -MF CMakeFiles/sedml.dir/SedErrorLog.cpp.o.d -o CMakeFiles/sedml.dir/SedErrorLog.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedErrorLog.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 27%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedErrorLog.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedErrorLog.cpp.o -MF CMakeFiles/sedml-static.dir/SedErrorLog.cpp.o.d -o CMakeFiles/sedml-static.dir/SedErrorLog.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedErrorLog.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 27%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedExperimentReference.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedExperimentReference.cpp.o -MF CMakeFiles/sedml.dir/SedExperimentReference.cpp.o.d -o CMakeFiles/sedml.dir/SedExperimentReference.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedExperimentReference.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 28%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedExperimentReference.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedExperimentReference.cpp.o -MF CMakeFiles/sedml-static.dir/SedExperimentReference.cpp.o.d -o CMakeFiles/sedml-static.dir/SedExperimentReference.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedExperimentReference.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 29%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedFigure.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedFigure.cpp.o -MF CMakeFiles/sedml.dir/SedFigure.cpp.o.d -o CMakeFiles/sedml.dir/SedFigure.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedFigure.cpp /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedFigure.cpp: In member function ‘virtual void SedFigure::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedFigure.cpp:972:8: warning: unused variable ‘assigned’ [-Wunused-variable] 972 | bool assigned = false; | ^~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 29%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedFigure.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedFigure.cpp.o -MF CMakeFiles/sedml-static.dir/SedFigure.cpp.o.d -o CMakeFiles/sedml-static.dir/SedFigure.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedFigure.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedFigure.cpp: In member function ‘virtual void SedFigure::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedFigure.cpp:972:8: warning: unused variable ‘assigned’ [-Wunused-variable] 972 | bool assigned = false; | ^~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 29%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedFill.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedFill.cpp.o -MF CMakeFiles/sedml.dir/SedFill.cpp.o.d -o CMakeFiles/sedml.dir/SedFill.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedFill.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 30%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedFill.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedFill.cpp.o -MF CMakeFiles/sedml-static.dir/SedFill.cpp.o.d -o CMakeFiles/sedml-static.dir/SedFill.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedFill.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 31%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedFitExperiment.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedFitExperiment.cpp.o -MF CMakeFiles/sedml.dir/SedFitExperiment.cpp.o.d -o CMakeFiles/sedml.dir/SedFitExperiment.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedFitExperiment.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 31%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedFitExperiment.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedFitExperiment.cpp.o -MF CMakeFiles/sedml-static.dir/SedFitExperiment.cpp.o.d -o CMakeFiles/sedml-static.dir/SedFitExperiment.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedFitExperiment.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 31%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedFitMapping.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedFitMapping.cpp.o -MF CMakeFiles/sedml.dir/SedFitMapping.cpp.o.d -o CMakeFiles/sedml.dir/SedFitMapping.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedFitMapping.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 32%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedFitMapping.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedFitMapping.cpp.o -MF CMakeFiles/sedml-static.dir/SedFitMapping.cpp.o.d -o CMakeFiles/sedml-static.dir/SedFitMapping.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedFitMapping.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 33%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedFunctionalRange.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedFunctionalRange.cpp.o -MF CMakeFiles/sedml.dir/SedFunctionalRange.cpp.o.d -o CMakeFiles/sedml.dir/SedFunctionalRange.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedFunctionalRange.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 33%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedFunctionalRange.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedFunctionalRange.cpp.o -MF CMakeFiles/sedml-static.dir/SedFunctionalRange.cpp.o.d -o CMakeFiles/sedml-static.dir/SedFunctionalRange.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedFunctionalRange.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 33%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedLeastSquareObjectiveFunction.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedLeastSquareObjectiveFunction.cpp.o -MF CMakeFiles/sedml.dir/SedLeastSquareObjectiveFunction.cpp.o.d -o CMakeFiles/sedml.dir/SedLeastSquareObjectiveFunction.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedLeastSquareObjectiveFunction.cpp /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedLeastSquareObjectiveFunction.cpp: In member function ‘virtual void SedLeastSquareObjectiveFunction::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedLeastSquareObjectiveFunction.cpp:486:8: warning: unused variable ‘assigned’ [-Wunused-variable] 486 | bool assigned = false; | ^~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 34%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedLeastSquareObjectiveFunction.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedLeastSquareObjectiveFunction.cpp.o -MF CMakeFiles/sedml-static.dir/SedLeastSquareObjectiveFunction.cpp.o.d -o CMakeFiles/sedml-static.dir/SedLeastSquareObjectiveFunction.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedLeastSquareObjectiveFunction.cpp /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedLeastSquareObjectiveFunction.cpp: In member function ‘virtual void SedLeastSquareObjectiveFunction::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedLeastSquareObjectiveFunction.cpp:486:8: warning: unused variable ‘assigned’ [-Wunused-variable] 486 | bool assigned = false; | ^~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 35%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedLine.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedLine.cpp.o -MF CMakeFiles/sedml.dir/SedLine.cpp.o.d -o CMakeFiles/sedml.dir/SedLine.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedLine.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 35%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedLine.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedLine.cpp.o -MF CMakeFiles/sedml-static.dir/SedLine.cpp.o.d -o CMakeFiles/sedml-static.dir/SedLine.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedLine.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 35%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedListOf.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedListOf.cpp.o -MF CMakeFiles/sedml.dir/SedListOf.cpp.o.d -o CMakeFiles/sedml.dir/SedListOf.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOf.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 36%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedListOf.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedListOf.cpp.o -MF CMakeFiles/sedml-static.dir/SedListOf.cpp.o.d -o CMakeFiles/sedml-static.dir/SedListOf.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOf.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 37%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedListOfAdjustableParameters.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedListOfAdjustableParameters.cpp.o -MF CMakeFiles/sedml.dir/SedListOfAdjustableParameters.cpp.o.d -o CMakeFiles/sedml.dir/SedListOfAdjustableParameters.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfAdjustableParameters.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 37%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedListOfAdjustableParameters.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedListOfAdjustableParameters.cpp.o -MF CMakeFiles/sedml-static.dir/SedListOfAdjustableParameters.cpp.o.d -o CMakeFiles/sedml-static.dir/SedListOfAdjustableParameters.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfAdjustableParameters.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 37%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedListOfAlgorithmParameters.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedListOfAlgorithmParameters.cpp.o -MF CMakeFiles/sedml.dir/SedListOfAlgorithmParameters.cpp.o.d -o CMakeFiles/sedml.dir/SedListOfAlgorithmParameters.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfAlgorithmParameters.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 38%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedListOfAlgorithmParameters.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedListOfAlgorithmParameters.cpp.o -MF CMakeFiles/sedml-static.dir/SedListOfAlgorithmParameters.cpp.o.d -o CMakeFiles/sedml-static.dir/SedListOfAlgorithmParameters.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfAlgorithmParameters.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 39%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedListOfAppliedDimensions.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedListOfAppliedDimensions.cpp.o -MF CMakeFiles/sedml.dir/SedListOfAppliedDimensions.cpp.o.d -o CMakeFiles/sedml.dir/SedListOfAppliedDimensions.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfAppliedDimensions.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 39%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedListOfAppliedDimensions.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedListOfAppliedDimensions.cpp.o -MF CMakeFiles/sedml-static.dir/SedListOfAppliedDimensions.cpp.o.d -o CMakeFiles/sedml-static.dir/SedListOfAppliedDimensions.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfAppliedDimensions.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 39%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedListOfChanges.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedListOfChanges.cpp.o -MF CMakeFiles/sedml.dir/SedListOfChanges.cpp.o.d -o CMakeFiles/sedml.dir/SedListOfChanges.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfChanges.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 40%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedListOfChanges.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedListOfChanges.cpp.o -MF CMakeFiles/sedml-static.dir/SedListOfChanges.cpp.o.d -o CMakeFiles/sedml-static.dir/SedListOfChanges.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfChanges.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 41%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedListOfCurves.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedListOfCurves.cpp.o -MF CMakeFiles/sedml.dir/SedListOfCurves.cpp.o.d -o CMakeFiles/sedml.dir/SedListOfCurves.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfCurves.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 41%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedListOfCurves.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedListOfCurves.cpp.o -MF CMakeFiles/sedml-static.dir/SedListOfCurves.cpp.o.d -o CMakeFiles/sedml-static.dir/SedListOfCurves.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfCurves.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 41%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedListOfDataDescriptions.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedListOfDataDescriptions.cpp.o -MF CMakeFiles/sedml.dir/SedListOfDataDescriptions.cpp.o.d -o CMakeFiles/sedml.dir/SedListOfDataDescriptions.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfDataDescriptions.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 42%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedListOfDataDescriptions.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedListOfDataDescriptions.cpp.o -MF CMakeFiles/sedml-static.dir/SedListOfDataDescriptions.cpp.o.d -o CMakeFiles/sedml-static.dir/SedListOfDataDescriptions.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfDataDescriptions.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 43%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedListOfDataGenerators.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedListOfDataGenerators.cpp.o -MF CMakeFiles/sedml.dir/SedListOfDataGenerators.cpp.o.d -o CMakeFiles/sedml.dir/SedListOfDataGenerators.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfDataGenerators.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 43%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedListOfDataGenerators.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedListOfDataGenerators.cpp.o -MF CMakeFiles/sedml-static.dir/SedListOfDataGenerators.cpp.o.d -o CMakeFiles/sedml-static.dir/SedListOfDataGenerators.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfDataGenerators.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 43%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedListOfDataSets.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedListOfDataSets.cpp.o -MF CMakeFiles/sedml.dir/SedListOfDataSets.cpp.o.d -o CMakeFiles/sedml.dir/SedListOfDataSets.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfDataSets.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 44%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedListOfDataSets.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedListOfDataSets.cpp.o -MF CMakeFiles/sedml-static.dir/SedListOfDataSets.cpp.o.d -o CMakeFiles/sedml-static.dir/SedListOfDataSets.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfDataSets.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 45%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedListOfDataSources.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedListOfDataSources.cpp.o -MF CMakeFiles/sedml.dir/SedListOfDataSources.cpp.o.d -o CMakeFiles/sedml.dir/SedListOfDataSources.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfDataSources.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 45%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedListOfDataSources.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedListOfDataSources.cpp.o -MF CMakeFiles/sedml-static.dir/SedListOfDataSources.cpp.o.d -o CMakeFiles/sedml-static.dir/SedListOfDataSources.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfDataSources.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 45%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedListOfExperimentReferences.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedListOfExperimentReferences.cpp.o -MF CMakeFiles/sedml.dir/SedListOfExperimentReferences.cpp.o.d -o CMakeFiles/sedml.dir/SedListOfExperimentReferences.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfExperimentReferences.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 46%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedListOfExperimentReferences.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedListOfExperimentReferences.cpp.o -MF CMakeFiles/sedml-static.dir/SedListOfExperimentReferences.cpp.o.d -o CMakeFiles/sedml-static.dir/SedListOfExperimentReferences.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfExperimentReferences.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 47%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedListOfFitExperiments.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedListOfFitExperiments.cpp.o -MF CMakeFiles/sedml.dir/SedListOfFitExperiments.cpp.o.d -o CMakeFiles/sedml.dir/SedListOfFitExperiments.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfFitExperiments.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 47%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedListOfFitExperiments.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedListOfFitExperiments.cpp.o -MF CMakeFiles/sedml-static.dir/SedListOfFitExperiments.cpp.o.d -o CMakeFiles/sedml-static.dir/SedListOfFitExperiments.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfFitExperiments.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 47%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedListOfFitMappings.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedListOfFitMappings.cpp.o -MF CMakeFiles/sedml.dir/SedListOfFitMappings.cpp.o.d -o CMakeFiles/sedml.dir/SedListOfFitMappings.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfFitMappings.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 48%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedListOfFitMappings.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedListOfFitMappings.cpp.o -MF CMakeFiles/sedml-static.dir/SedListOfFitMappings.cpp.o.d -o CMakeFiles/sedml-static.dir/SedListOfFitMappings.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfFitMappings.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 48%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedListOfModels.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedListOfModels.cpp.o -MF CMakeFiles/sedml.dir/SedListOfModels.cpp.o.d -o CMakeFiles/sedml.dir/SedListOfModels.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfModels.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 48%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedListOfModels.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedListOfModels.cpp.o -MF CMakeFiles/sedml-static.dir/SedListOfModels.cpp.o.d -o CMakeFiles/sedml-static.dir/SedListOfModels.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfModels.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 49%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedListOfOutputs.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedListOfOutputs.cpp.o -MF CMakeFiles/sedml.dir/SedListOfOutputs.cpp.o.d -o CMakeFiles/sedml.dir/SedListOfOutputs.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfOutputs.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 50%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedListOfOutputs.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedListOfOutputs.cpp.o -MF CMakeFiles/sedml-static.dir/SedListOfOutputs.cpp.o.d -o CMakeFiles/sedml-static.dir/SedListOfOutputs.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfOutputs.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 50%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedListOfParameters.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedListOfParameters.cpp.o -MF CMakeFiles/sedml.dir/SedListOfParameters.cpp.o.d -o CMakeFiles/sedml.dir/SedListOfParameters.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfParameters.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 50%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedListOfParameters.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedListOfParameters.cpp.o -MF CMakeFiles/sedml-static.dir/SedListOfParameters.cpp.o.d -o CMakeFiles/sedml-static.dir/SedListOfParameters.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfParameters.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 51%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedListOfRanges.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedListOfRanges.cpp.o -MF CMakeFiles/sedml.dir/SedListOfRanges.cpp.o.d -o CMakeFiles/sedml.dir/SedListOfRanges.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfRanges.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 51%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedListOfRanges.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedListOfRanges.cpp.o -MF CMakeFiles/sedml-static.dir/SedListOfRanges.cpp.o.d -o CMakeFiles/sedml-static.dir/SedListOfRanges.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfRanges.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 52%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedListOfSetValues.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedListOfSetValues.cpp.o -MF CMakeFiles/sedml-static.dir/SedListOfSetValues.cpp.o.d -o CMakeFiles/sedml-static.dir/SedListOfSetValues.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfSetValues.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 51%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedListOfSetValues.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedListOfSetValues.cpp.o -MF CMakeFiles/sedml.dir/SedListOfSetValues.cpp.o.d -o CMakeFiles/sedml.dir/SedListOfSetValues.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfSetValues.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 52%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedListOfSimulations.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedListOfSimulations.cpp.o -MF CMakeFiles/sedml-static.dir/SedListOfSimulations.cpp.o.d -o CMakeFiles/sedml-static.dir/SedListOfSimulations.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfSimulations.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 53%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedListOfSimulations.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedListOfSimulations.cpp.o -MF CMakeFiles/sedml.dir/SedListOfSimulations.cpp.o.d -o CMakeFiles/sedml.dir/SedListOfSimulations.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfSimulations.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 54%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedListOfSlices.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedListOfSlices.cpp.o -MF CMakeFiles/sedml-static.dir/SedListOfSlices.cpp.o.d -o CMakeFiles/sedml-static.dir/SedListOfSlices.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfSlices.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 54%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedListOfSlices.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedListOfSlices.cpp.o -MF CMakeFiles/sedml.dir/SedListOfSlices.cpp.o.d -o CMakeFiles/sedml.dir/SedListOfSlices.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfSlices.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 54%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedListOfStyles.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedListOfStyles.cpp.o -MF CMakeFiles/sedml-static.dir/SedListOfStyles.cpp.o.d -o CMakeFiles/sedml-static.dir/SedListOfStyles.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfStyles.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 55%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedListOfStyles.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedListOfStyles.cpp.o -MF CMakeFiles/sedml.dir/SedListOfStyles.cpp.o.d -o CMakeFiles/sedml.dir/SedListOfStyles.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfStyles.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 56%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedListOfSubPlots.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedListOfSubPlots.cpp.o -MF CMakeFiles/sedml-static.dir/SedListOfSubPlots.cpp.o.d -o CMakeFiles/sedml-static.dir/SedListOfSubPlots.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfSubPlots.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 56%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedListOfSubPlots.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedListOfSubPlots.cpp.o -MF CMakeFiles/sedml.dir/SedListOfSubPlots.cpp.o.d -o CMakeFiles/sedml.dir/SedListOfSubPlots.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfSubPlots.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 56%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedListOfSubTasks.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedListOfSubTasks.cpp.o -MF CMakeFiles/sedml-static.dir/SedListOfSubTasks.cpp.o.d -o CMakeFiles/sedml-static.dir/SedListOfSubTasks.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfSubTasks.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 57%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedListOfSubTasks.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedListOfSubTasks.cpp.o -MF CMakeFiles/sedml.dir/SedListOfSubTasks.cpp.o.d -o CMakeFiles/sedml.dir/SedListOfSubTasks.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfSubTasks.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 58%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedListOfSurfaces.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedListOfSurfaces.cpp.o -MF CMakeFiles/sedml-static.dir/SedListOfSurfaces.cpp.o.d -o CMakeFiles/sedml-static.dir/SedListOfSurfaces.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfSurfaces.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 58%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedListOfSurfaces.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedListOfSurfaces.cpp.o -MF CMakeFiles/sedml.dir/SedListOfSurfaces.cpp.o.d -o CMakeFiles/sedml.dir/SedListOfSurfaces.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfSurfaces.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 58%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedListOfTasks.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedListOfTasks.cpp.o -MF CMakeFiles/sedml-static.dir/SedListOfTasks.cpp.o.d -o CMakeFiles/sedml-static.dir/SedListOfTasks.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfTasks.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 59%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedListOfTasks.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedListOfTasks.cpp.o -MF CMakeFiles/sedml.dir/SedListOfTasks.cpp.o.d -o CMakeFiles/sedml.dir/SedListOfTasks.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfTasks.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 60%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedListOfVariables.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedListOfVariables.cpp.o -MF CMakeFiles/sedml-static.dir/SedListOfVariables.cpp.o.d -o CMakeFiles/sedml-static.dir/SedListOfVariables.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfVariables.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 60%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedListOfVariables.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedListOfVariables.cpp.o -MF CMakeFiles/sedml.dir/SedListOfVariables.cpp.o.d -o CMakeFiles/sedml.dir/SedListOfVariables.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfVariables.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 60%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedMarker.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedMarker.cpp.o -MF CMakeFiles/sedml-static.dir/SedMarker.cpp.o.d -o CMakeFiles/sedml-static.dir/SedMarker.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedMarker.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 61%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedMarker.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedMarker.cpp.o -MF CMakeFiles/sedml.dir/SedMarker.cpp.o.d -o CMakeFiles/sedml.dir/SedMarker.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedMarker.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 62%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedModel.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedModel.cpp.o -MF CMakeFiles/sedml-static.dir/SedModel.cpp.o.d -o CMakeFiles/sedml-static.dir/SedModel.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedModel.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 62%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedModel.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedModel.cpp.o -MF CMakeFiles/sedml.dir/SedModel.cpp.o.d -o CMakeFiles/sedml.dir/SedModel.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedModel.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 62%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedNamespaces.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedNamespaces.cpp.o -MF CMakeFiles/sedml-static.dir/SedNamespaces.cpp.o.d -o CMakeFiles/sedml-static.dir/SedNamespaces.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedNamespaces.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 63%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedNamespaces.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedNamespaces.cpp.o -MF CMakeFiles/sedml.dir/SedNamespaces.cpp.o.d -o CMakeFiles/sedml.dir/SedNamespaces.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedNamespaces.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 64%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedObjective.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedObjective.cpp.o -MF CMakeFiles/sedml-static.dir/SedObjective.cpp.o.d -o CMakeFiles/sedml-static.dir/SedObjective.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedObjective.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 64%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedObjective.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedObjective.cpp.o -MF CMakeFiles/sedml.dir/SedObjective.cpp.o.d -o CMakeFiles/sedml.dir/SedObjective.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedObjective.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 64%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedOneStep.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedOneStep.cpp.o -MF CMakeFiles/sedml-static.dir/SedOneStep.cpp.o.d -o CMakeFiles/sedml-static.dir/SedOneStep.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedOneStep.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedOneStep.cpp: In member function ‘virtual void SedOneStep::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedOneStep.cpp:546:8: warning: unused variable ‘assigned’ [-Wunused-variable] 546 | bool assigned = false; | ^~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 65%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedOneStep.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedOneStep.cpp.o -MF CMakeFiles/sedml.dir/SedOneStep.cpp.o.d -o CMakeFiles/sedml.dir/SedOneStep.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedOneStep.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedOneStep.cpp: In member function ‘virtual void SedOneStep::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedOneStep.cpp:546:8: warning: unused variable ‘assigned’ [-Wunused-variable] 546 | bool assigned = false; | ^~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 66%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedOutput.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedOutput.cpp.o -MF CMakeFiles/sedml-static.dir/SedOutput.cpp.o.d -o CMakeFiles/sedml-static.dir/SedOutput.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedOutput.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedOutput.cpp: In member function ‘virtual void SedOutput::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedOutput.cpp:521:8: warning: unused variable ‘assigned’ [-Wunused-variable] 521 | bool assigned = false; | ^~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 66%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedOutput.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedOutput.cpp.o -MF CMakeFiles/sedml.dir/SedOutput.cpp.o.d -o CMakeFiles/sedml.dir/SedOutput.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedOutput.cpp /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedOutput.cpp: In member function ‘virtual void SedOutput::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedOutput.cpp:521:8: warning: unused variable ‘assigned’ [-Wunused-variable] 521 | bool assigned = false; | ^~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 66%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedParameter.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedParameter.cpp.o -MF CMakeFiles/sedml-static.dir/SedParameter.cpp.o.d -o CMakeFiles/sedml-static.dir/SedParameter.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedParameter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedParameter.cpp: In member function ‘virtual void SedParameter::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedParameter.cpp:544:8: warning: unused variable ‘assigned’ [-Wunused-variable] 544 | bool assigned = false; | ^~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 67%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedParameter.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedParameter.cpp.o -MF CMakeFiles/sedml.dir/SedParameter.cpp.o.d -o CMakeFiles/sedml.dir/SedParameter.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedParameter.cpp /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedParameter.cpp: In member function ‘virtual void SedParameter::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedParameter.cpp:544:8: warning: unused variable ‘assigned’ [-Wunused-variable] 544 | bool assigned = false; | ^~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 68%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedParameterEstimationReport.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedParameterEstimationReport.cpp.o -MF CMakeFiles/sedml.dir/SedParameterEstimationReport.cpp.o.d -o CMakeFiles/sedml.dir/SedParameterEstimationReport.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedParameterEstimationReport.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 68%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedParameterEstimationReport.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedParameterEstimationReport.cpp.o -MF CMakeFiles/sedml-static.dir/SedParameterEstimationReport.cpp.o.d -o CMakeFiles/sedml-static.dir/SedParameterEstimationReport.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedParameterEstimationReport.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 69%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedParameterEstimationResultPlot.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedParameterEstimationResultPlot.cpp.o -MF CMakeFiles/sedml.dir/SedParameterEstimationResultPlot.cpp.o.d -o CMakeFiles/sedml.dir/SedParameterEstimationResultPlot.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedParameterEstimationResultPlot.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 69%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedParameterEstimationResultPlot.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedParameterEstimationResultPlot.cpp.o -MF CMakeFiles/sedml-static.dir/SedParameterEstimationResultPlot.cpp.o.d -o CMakeFiles/sedml-static.dir/SedParameterEstimationResultPlot.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedParameterEstimationResultPlot.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 69%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedParameterEstimationTask.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedParameterEstimationTask.cpp.o -MF CMakeFiles/sedml.dir/SedParameterEstimationTask.cpp.o.d -o CMakeFiles/sedml.dir/SedParameterEstimationTask.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedParameterEstimationTask.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedParameterEstimationTask.cpp: In member function ‘virtual void SedParameterEstimationTask::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedParameterEstimationTask.cpp:1453:8: warning: unused variable ‘assigned’ [-Wunused-variable] 1453 | bool assigned = false; | ^~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 70%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedParameterEstimationTask.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedParameterEstimationTask.cpp.o -MF CMakeFiles/sedml-static.dir/SedParameterEstimationTask.cpp.o.d -o CMakeFiles/sedml-static.dir/SedParameterEstimationTask.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedParameterEstimationTask.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedParameterEstimationTask.cpp: In member function ‘virtual void SedParameterEstimationTask::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedParameterEstimationTask.cpp:1453:8: warning: unused variable ‘assigned’ [-Wunused-variable] 1453 | bool assigned = false; | ^~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 71%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedPlot.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedPlot.cpp.o -MF CMakeFiles/sedml.dir/SedPlot.cpp.o.d -o CMakeFiles/sedml.dir/SedPlot.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedPlot.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedPlot.cpp: In member function ‘virtual void SedPlot::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedPlot.cpp:1225:8: warning: unused variable ‘assigned’ [-Wunused-variable] 1225 | bool assigned = false; | ^~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 71%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedPlot.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedPlot.cpp.o -MF CMakeFiles/sedml-static.dir/SedPlot.cpp.o.d -o CMakeFiles/sedml-static.dir/SedPlot.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedPlot.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedPlot.cpp: In member function ‘virtual void SedPlot::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedPlot.cpp:1225:8: warning: unused variable ‘assigned’ [-Wunused-variable] 1225 | bool assigned = false; | ^~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 71%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedPlot2D.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedPlot2D.cpp.o -MF CMakeFiles/sedml.dir/SedPlot2D.cpp.o.d -o CMakeFiles/sedml.dir/SedPlot2D.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedPlot2D.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedPlot2D.cpp: In member function ‘virtual void SedPlot2D::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedPlot2D.cpp:1084:8: warning: unused variable ‘assigned’ [-Wunused-variable] 1084 | bool assigned = false; | ^~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 72%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedPlot2D.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedPlot2D.cpp.o -MF CMakeFiles/sedml-static.dir/SedPlot2D.cpp.o.d -o CMakeFiles/sedml-static.dir/SedPlot2D.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedPlot2D.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedPlot2D.cpp: In member function ‘virtual void SedPlot2D::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedPlot2D.cpp:1084:8: warning: unused variable ‘assigned’ [-Wunused-variable] 1084 | bool assigned = false; | ^~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 72%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedPlot3D.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedPlot3D.cpp.o -MF CMakeFiles/sedml.dir/SedPlot3D.cpp.o.d -o CMakeFiles/sedml.dir/SedPlot3D.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedPlot3D.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedPlot3D.cpp: In member function ‘virtual void SedPlot3D::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedPlot3D.cpp:1083:8: warning: unused variable ‘assigned’ [-Wunused-variable] 1083 | bool assigned = false; | ^~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 72%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedPlot3D.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedPlot3D.cpp.o -MF CMakeFiles/sedml-static.dir/SedPlot3D.cpp.o.d -o CMakeFiles/sedml-static.dir/SedPlot3D.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedPlot3D.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedPlot3D.cpp: In member function ‘virtual void SedPlot3D::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedPlot3D.cpp:1083:8: warning: unused variable ‘assigned’ [-Wunused-variable] 1083 | bool assigned = false; | ^~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 73%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedRange.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedRange.cpp.o -MF CMakeFiles/sedml.dir/SedRange.cpp.o.d -o CMakeFiles/sedml.dir/SedRange.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedRange.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedRange.cpp: In member function ‘virtual void SedRange::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedRange.cpp:535:8: warning: unused variable ‘assigned’ [-Wunused-variable] 535 | bool assigned = false; | ^~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 74%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedRange.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedRange.cpp.o -MF CMakeFiles/sedml-static.dir/SedRange.cpp.o.d -o CMakeFiles/sedml-static.dir/SedRange.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedRange.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedRange.cpp: In member function ‘virtual void SedRange::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedRange.cpp:535:8: warning: unused variable ‘assigned’ [-Wunused-variable] 535 | bool assigned = false; | ^~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 74%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedReader.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedReader.cpp.o -MF CMakeFiles/sedml.dir/SedReader.cpp.o.d -o CMakeFiles/sedml.dir/SedReader.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedReader.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 74%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedReader.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedReader.cpp.o -MF CMakeFiles/sedml-static.dir/SedReader.cpp.o.d -o CMakeFiles/sedml-static.dir/SedReader.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedReader.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 75%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedRemoveXML.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedRemoveXML.cpp.o -MF CMakeFiles/sedml.dir/SedRemoveXML.cpp.o.d -o CMakeFiles/sedml.dir/SedRemoveXML.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedRemoveXML.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedRemoveXML.cpp: In member function ‘virtual void SedRemoveXML::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedRemoveXML.cpp:456:8: warning: unused variable ‘assigned’ [-Wunused-variable] 456 | bool assigned = false; | ^~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 75%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedRemoveXML.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedRemoveXML.cpp.o -MF CMakeFiles/sedml-static.dir/SedRemoveXML.cpp.o.d -o CMakeFiles/sedml-static.dir/SedRemoveXML.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedRemoveXML.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedRemoveXML.cpp: In member function ‘virtual void SedRemoveXML::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedRemoveXML.cpp:456:8: warning: unused variable ‘assigned’ [-Wunused-variable] 456 | bool assigned = false; | ^~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 75%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedRepeatedTask.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedRepeatedTask.cpp.o -MF CMakeFiles/sedml.dir/SedRepeatedTask.cpp.o.d -o CMakeFiles/sedml.dir/SedRepeatedTask.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedRepeatedTask.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 76%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedRepeatedTask.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedRepeatedTask.cpp.o -MF CMakeFiles/sedml-static.dir/SedRepeatedTask.cpp.o.d -o CMakeFiles/sedml-static.dir/SedRepeatedTask.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedRepeatedTask.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 77%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedReport.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedReport.cpp.o -MF CMakeFiles/sedml.dir/SedReport.cpp.o.d -o CMakeFiles/sedml.dir/SedReport.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedReport.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedReport.cpp: In member function ‘virtual void SedReport::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedReport.cpp:837:8: warning: unused variable ‘assigned’ [-Wunused-variable] 837 | bool assigned = false; | ^~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 77%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedReport.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedReport.cpp.o -MF CMakeFiles/sedml-static.dir/SedReport.cpp.o.d -o CMakeFiles/sedml-static.dir/SedReport.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedReport.cpp /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedReport.cpp: In member function ‘virtual void SedReport::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedReport.cpp:837:8: warning: unused variable ‘assigned’ [-Wunused-variable] 837 | bool assigned = false; | ^~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 77%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedSetValue.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedSetValue.cpp.o -MF CMakeFiles/sedml.dir/SedSetValue.cpp.o.d -o CMakeFiles/sedml.dir/SedSetValue.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedSetValue.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 78%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedSetValue.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedSetValue.cpp.o -MF CMakeFiles/sedml-static.dir/SedSetValue.cpp.o.d -o CMakeFiles/sedml-static.dir/SedSetValue.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedSetValue.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 79%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedShadedArea.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedShadedArea.cpp.o -MF CMakeFiles/sedml.dir/SedShadedArea.cpp.o.d -o CMakeFiles/sedml.dir/SedShadedArea.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedShadedArea.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 79%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedShadedArea.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedShadedArea.cpp.o -MF CMakeFiles/sedml-static.dir/SedShadedArea.cpp.o.d -o CMakeFiles/sedml-static.dir/SedShadedArea.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedShadedArea.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 79%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedSimulation.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedSimulation.cpp.o -MF CMakeFiles/sedml.dir/SedSimulation.cpp.o.d -o CMakeFiles/sedml.dir/SedSimulation.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedSimulation.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedSimulation.cpp: In member function ‘virtual void SedSimulation::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedSimulation.cpp:881:8: warning: unused variable ‘assigned’ [-Wunused-variable] 881 | bool assigned = false; | ^~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 80%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedSimulation.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedSimulation.cpp.o -MF CMakeFiles/sedml-static.dir/SedSimulation.cpp.o.d -o CMakeFiles/sedml-static.dir/SedSimulation.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedSimulation.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedSimulation.cpp: In member function ‘virtual void SedSimulation::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedSimulation.cpp:881:8: warning: unused variable ‘assigned’ [-Wunused-variable] 881 | bool assigned = false; | ^~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 81%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedSlice.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedSlice.cpp.o -MF CMakeFiles/sedml.dir/SedSlice.cpp.o.d -o CMakeFiles/sedml.dir/SedSlice.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedSlice.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 81%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedSlice.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedSlice.cpp.o -MF CMakeFiles/sedml-static.dir/SedSlice.cpp.o.d -o CMakeFiles/sedml-static.dir/SedSlice.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedSlice.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 81%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedSteadyState.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedSteadyState.cpp.o -MF CMakeFiles/sedml.dir/SedSteadyState.cpp.o.d -o CMakeFiles/sedml.dir/SedSteadyState.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedSteadyState.cpp /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedSteadyState.cpp: In member function ‘virtual void SedSteadyState::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedSteadyState.cpp:458:8: warning: unused variable ‘assigned’ [-Wunused-variable] 458 | bool assigned = false; | ^~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 82%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedSteadyState.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedSteadyState.cpp.o -MF CMakeFiles/sedml-static.dir/SedSteadyState.cpp.o.d -o CMakeFiles/sedml-static.dir/SedSteadyState.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedSteadyState.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedSteadyState.cpp: In member function ‘virtual void SedSteadyState::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedSteadyState.cpp:458:8: warning: unused variable ‘assigned’ [-Wunused-variable] 458 | bool assigned = false; | ^~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 83%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedStyle.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedStyle.cpp.o -MF CMakeFiles/sedml.dir/SedStyle.cpp.o.d -o CMakeFiles/sedml.dir/SedStyle.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedStyle.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 83%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedStyle.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedStyle.cpp.o -MF CMakeFiles/sedml-static.dir/SedStyle.cpp.o.d -o CMakeFiles/sedml-static.dir/SedStyle.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedStyle.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 83%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedSubPlot.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedSubPlot.cpp.o -MF CMakeFiles/sedml.dir/SedSubPlot.cpp.o.d -o CMakeFiles/sedml.dir/SedSubPlot.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedSubPlot.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 84%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedSubPlot.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedSubPlot.cpp.o -MF CMakeFiles/sedml-static.dir/SedSubPlot.cpp.o.d -o CMakeFiles/sedml-static.dir/SedSubPlot.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedSubPlot.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 85%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedSubTask.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedSubTask.cpp.o -MF CMakeFiles/sedml.dir/SedSubTask.cpp.o.d -o CMakeFiles/sedml.dir/SedSubTask.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedSubTask.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 85%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedSubTask.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedSubTask.cpp.o -MF CMakeFiles/sedml-static.dir/SedSubTask.cpp.o.d -o CMakeFiles/sedml-static.dir/SedSubTask.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedSubTask.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 85%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedSurface.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedSurface.cpp.o -MF CMakeFiles/sedml.dir/SedSurface.cpp.o.d -o CMakeFiles/sedml.dir/SedSurface.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedSurface.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 86%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedSurface.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedSurface.cpp.o -MF CMakeFiles/sedml-static.dir/SedSurface.cpp.o.d -o CMakeFiles/sedml-static.dir/SedSurface.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedSurface.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 87%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedTask.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedTask.cpp.o -MF CMakeFiles/sedml.dir/SedTask.cpp.o.d -o CMakeFiles/sedml.dir/SedTask.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedTask.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 87%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedTypeCodes.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedTypeCodes.cpp.o -MF CMakeFiles/sedml.dir/SedTypeCodes.cpp.o.d -o CMakeFiles/sedml.dir/SedTypeCodes.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedTypeCodes.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 87%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedTask.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedTask.cpp.o -MF CMakeFiles/sedml-static.dir/SedTask.cpp.o.d -o CMakeFiles/sedml-static.dir/SedTask.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedTask.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 89%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedTypeCodes.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedTypeCodes.cpp.o -MF CMakeFiles/sedml-static.dir/SedTypeCodes.cpp.o.d -o CMakeFiles/sedml-static.dir/SedTypeCodes.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedTypeCodes.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 88%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedUniformRange.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedUniformRange.cpp.o -MF CMakeFiles/sedml.dir/SedUniformRange.cpp.o.d -o CMakeFiles/sedml.dir/SedUniformRange.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedUniformRange.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 89%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedUniformRange.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedUniformRange.cpp.o -MF CMakeFiles/sedml-static.dir/SedUniformRange.cpp.o.d -o CMakeFiles/sedml-static.dir/SedUniformRange.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedUniformRange.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 89%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedUniformTimeCourse.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedUniformTimeCourse.cpp.o -MF CMakeFiles/sedml.dir/SedUniformTimeCourse.cpp.o.d -o CMakeFiles/sedml.dir/SedUniformTimeCourse.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedUniformTimeCourse.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedUniformTimeCourse.cpp: In member function ‘virtual void SedUniformTimeCourse::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedUniformTimeCourse.cpp:895:8: warning: unused variable ‘assigned’ [-Wunused-variable] 895 | bool assigned = false; | ^~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 90%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedUniformTimeCourse.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedUniformTimeCourse.cpp.o -MF CMakeFiles/sedml-static.dir/SedUniformTimeCourse.cpp.o.d -o CMakeFiles/sedml-static.dir/SedUniformTimeCourse.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedUniformTimeCourse.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedUniformTimeCourse.cpp: In member function ‘virtual void SedUniformTimeCourse::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedUniformTimeCourse.cpp:895:8: warning: unused variable ‘assigned’ [-Wunused-variable] 895 | bool assigned = false; | ^~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 91%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedVariable.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedVariable.cpp.o -MF CMakeFiles/sedml.dir/SedVariable.cpp.o.d -o CMakeFiles/sedml.dir/SedVariable.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedVariable.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 91%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedVariable.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedVariable.cpp.o -MF CMakeFiles/sedml-static.dir/SedVariable.cpp.o.d -o CMakeFiles/sedml-static.dir/SedVariable.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedVariable.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 91%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedVectorRange.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedVectorRange.cpp.o -MF CMakeFiles/sedml.dir/SedVectorRange.cpp.o.d -o CMakeFiles/sedml.dir/SedVectorRange.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedVectorRange.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedVectorRange.cpp: In member function ‘virtual void SedVectorRange::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedVectorRange.cpp:551:8: warning: unused variable ‘assigned’ [-Wunused-variable] 551 | bool assigned = false; | ^~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 92%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedVectorRange.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedVectorRange.cpp.o -MF CMakeFiles/sedml-static.dir/SedVectorRange.cpp.o.d -o CMakeFiles/sedml-static.dir/SedVectorRange.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedVectorRange.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedVectorRange.cpp: In member function ‘virtual void SedVectorRange::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedVectorRange.cpp:551:8: warning: unused variable ‘assigned’ [-Wunused-variable] 551 | bool assigned = false; | ^~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 93%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedVisitor.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedVisitor.cpp.o -MF CMakeFiles/sedml.dir/SedVisitor.cpp.o.d -o CMakeFiles/sedml.dir/SedVisitor.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedVisitor.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 93%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedVisitor.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedVisitor.cpp.o -MF CMakeFiles/sedml-static.dir/SedVisitor.cpp.o.d -o CMakeFiles/sedml-static.dir/SedVisitor.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedVisitor.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 93%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedWaterfallPlot.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedWaterfallPlot.cpp.o -MF CMakeFiles/sedml.dir/SedWaterfallPlot.cpp.o.d -o CMakeFiles/sedml.dir/SedWaterfallPlot.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedWaterfallPlot.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 94%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedWaterfallPlot.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedWaterfallPlot.cpp.o -MF CMakeFiles/sedml-static.dir/SedWaterfallPlot.cpp.o.d -o CMakeFiles/sedml-static.dir/SedWaterfallPlot.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedWaterfallPlot.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 95%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedWriter.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedWriter.cpp.o -MF CMakeFiles/sedml.dir/SedWriter.cpp.o.d -o CMakeFiles/sedml.dir/SedWriter.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedWriter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 95%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedWriter.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedWriter.cpp.o -MF CMakeFiles/sedml-static.dir/SedWriter.cpp.o.d -o CMakeFiles/sedml-static.dir/SedWriter.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedWriter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 95%] Building CXX object src/sedml/CMakeFiles/sedml.dir/kisaomap.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/kisaomap.cpp.o -MF CMakeFiles/sedml.dir/kisaomap.cpp.o.d -o CMakeFiles/sedml.dir/kisaomap.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/kisaomap.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 96%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/kisaomap.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/kisaomap.cpp.o -MF CMakeFiles/sedml-static.dir/kisaomap.cpp.o.d -o CMakeFiles/sedml-static.dir/kisaomap.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/kisaomap.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 97%] Linking CXX static library libsedml-static.a cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/cmake -P CMakeFiles/sedml-static.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/cmake -E cmake_link_script CMakeFiles/sedml-static.dir/link.txt --verbose=1 /usr/bin/ar qc libsedml-static.a "CMakeFiles/sedml-static.dir/common/SedOperationReturnValues.cpp.o" "CMakeFiles/sedml-static.dir/common/SedmlEnumerations.cpp.o" "CMakeFiles/sedml-static.dir/common/libsedml-version.cpp.o" "CMakeFiles/sedml-static.dir/SedAbstractCurve.cpp.o" "CMakeFiles/sedml-static.dir/SedAbstractTask.cpp.o" "CMakeFiles/sedml-static.dir/SedAddXML.cpp.o" "CMakeFiles/sedml-static.dir/SedAdjustableParameter.cpp.o" "CMakeFiles/sedml-static.dir/SedAlgorithm.cpp.o" "CMakeFiles/sedml-static.dir/SedAlgorithmParameter.cpp.o" "CMakeFiles/sedml-static.dir/SedAnalysis.cpp.o" "CMakeFiles/sedml-static.dir/SedAppliedDimension.cpp.o" "CMakeFiles/sedml-static.dir/SedAxis.cpp.o" "CMakeFiles/sedml-static.dir/SedBase.cpp.o" "CMakeFiles/sedml-static.dir/SedBounds.cpp.o" "CMakeFiles/sedml-static.dir/SedChange.cpp.o" "CMakeFiles/sedml-static.dir/SedChangeAttribute.cpp.o" "CMakeFiles/sedml-static.dir/SedChangeXML.cpp.o" "CMakeFiles/sedml-static.dir/SedComputeChange.cpp.o" "CMakeFiles/sedml-static.dir/SedConstructorException.cpp.o" "CMakeFiles/sedml-static.dir/SedCurve.cpp.o" "CMakeFiles/sedml-static.dir/SedDataDescription.cpp.o" "CMakeFiles/sedml-static.dir/SedDataGenerator.cpp.o" "CMakeFiles/sedml-static.dir/SedDataRange.cpp.o" "CMakeFiles/sedml-static.dir/SedDataSet.cpp.o" "CMakeFiles/sedml-static.dir/SedDataSource.cpp.o" "CMakeFiles/sedml-static.dir/SedDocument.cpp.o" "CMakeFiles/sedml-static.dir/SedElementFilter.cpp.o" "CMakeFiles/sedml-static.dir/SedError.cpp.o" "CMakeFiles/sedml-static.dir/SedErrorLog.cpp.o" "CMakeFiles/sedml-static.dir/SedExperimentReference.cpp.o" "CMakeFiles/sedml-static.dir/SedFigure.cpp.o" "CMakeFiles/sedml-static.dir/SedFill.cpp.o" "CMakeFiles/sedml-static.dir/SedFitExperiment.cpp.o" "CMakeFiles/sedml-static.dir/SedFitMapping.cpp.o" "CMakeFiles/sedml-static.dir/SedFunctionalRange.cpp.o" "CMakeFiles/sedml-static.dir/SedLeastSquareObjectiveFunction.cpp.o" "CMakeFiles/sedml-static.dir/SedLine.cpp.o" "CMakeFiles/sedml-static.dir/SedListOf.cpp.o" "CMakeFiles/sedml-static.dir/SedListOfAdjustableParameters.cpp.o" "CMakeFiles/sedml-static.dir/SedListOfAlgorithmParameters.cpp.o" "CMakeFiles/sedml-static.dir/SedListOfAppliedDimensions.cpp.o" "CMakeFiles/sedml-static.dir/SedListOfChanges.cpp.o" "CMakeFiles/sedml-static.dir/SedListOfCurves.cpp.o" "CMakeFiles/sedml-static.dir/SedListOfDataDescriptions.cpp.o" "CMakeFiles/sedml-static.dir/SedListOfDataGenerators.cpp.o" "CMakeFiles/sedml-static.dir/SedListOfDataSets.cpp.o" "CMakeFiles/sedml-static.dir/SedListOfDataSources.cpp.o" "CMakeFiles/sedml-static.dir/SedListOfExperimentReferences.cpp.o" "CMakeFiles/sedml-static.dir/SedListOfFitExperiments.cpp.o" "CMakeFiles/sedml-static.dir/SedListOfFitMappings.cpp.o" "CMakeFiles/sedml-static.dir/SedListOfModels.cpp.o" "CMakeFiles/sedml-static.dir/SedListOfOutputs.cpp.o" "CMakeFiles/sedml-static.dir/SedListOfParameters.cpp.o" "CMakeFiles/sedml-static.dir/SedListOfRanges.cpp.o" "CMakeFiles/sedml-static.dir/SedListOfSetValues.cpp.o" "CMakeFiles/sedml-static.dir/SedListOfSimulations.cpp.o" "CMakeFiles/sedml-static.dir/SedListOfSlices.cpp.o" "CMakeFiles/sedml-static.dir/SedListOfStyles.cpp.o" "CMakeFiles/sedml-static.dir/SedListOfSubPlots.cpp.o" "CMakeFiles/sedml-static.dir/SedListOfSubTasks.cpp.o" "CMakeFiles/sedml-static.dir/SedListOfSurfaces.cpp.o" "CMakeFiles/sedml-static.dir/SedListOfTasks.cpp.o" "CMakeFiles/sedml-static.dir/SedListOfVariables.cpp.o" "CMakeFiles/sedml-static.dir/SedMarker.cpp.o" "CMakeFiles/sedml-static.dir/SedModel.cpp.o" "CMakeFiles/sedml-static.dir/SedNamespaces.cpp.o" "CMakeFiles/sedml-static.dir/SedObjective.cpp.o" "CMakeFiles/sedml-static.dir/SedOneStep.cpp.o" "CMakeFiles/sedml-static.dir/SedOutput.cpp.o" "CMakeFiles/sedml-static.dir/SedParameter.cpp.o" "CMakeFiles/sedml-static.dir/SedParameterEstimationReport.cpp.o" "CMakeFiles/sedml-static.dir/SedParameterEstimationResultPlot.cpp.o" "CMakeFiles/sedml-static.dir/SedParameterEstimationTask.cpp.o" "CMakeFiles/sedml-static.dir/SedPlot.cpp.o" "CMakeFiles/sedml-static.dir/SedPlot2D.cpp.o" "CMakeFiles/sedml-static.dir/SedPlot3D.cpp.o" "CMakeFiles/sedml-static.dir/SedRange.cpp.o" "CMakeFiles/sedml-static.dir/SedReader.cpp.o" "CMakeFiles/sedml-static.dir/SedRemoveXML.cpp.o" "CMakeFiles/sedml-static.dir/SedRepeatedTask.cpp.o" "CMakeFiles/sedml-static.dir/SedReport.cpp.o" "CMakeFiles/sedml-static.dir/SedSetValue.cpp.o" "CMakeFiles/sedml-static.dir/SedShadedArea.cpp.o" "CMakeFiles/sedml-static.dir/SedSimulation.cpp.o" "CMakeFiles/sedml-static.dir/SedSlice.cpp.o" "CMakeFiles/sedml-static.dir/SedSteadyState.cpp.o" "CMakeFiles/sedml-static.dir/SedStyle.cpp.o" "CMakeFiles/sedml-static.dir/SedSubPlot.cpp.o" "CMakeFiles/sedml-static.dir/SedSubTask.cpp.o" "CMakeFiles/sedml-static.dir/SedSurface.cpp.o" "CMakeFiles/sedml-static.dir/SedTask.cpp.o" "CMakeFiles/sedml-static.dir/SedTypeCodes.cpp.o" "CMakeFiles/sedml-static.dir/SedUniformRange.cpp.o" "CMakeFiles/sedml-static.dir/SedUniformTimeCourse.cpp.o" "CMakeFiles/sedml-static.dir/SedVariable.cpp.o" "CMakeFiles/sedml-static.dir/SedVectorRange.cpp.o" "CMakeFiles/sedml-static.dir/SedVisitor.cpp.o" "CMakeFiles/sedml-static.dir/SedWaterfallPlot.cpp.o" "CMakeFiles/sedml-static.dir/SedWriter.cpp.o" "CMakeFiles/sedml-static.dir/kisaomap.cpp.o" /usr/bin/ranlib libsedml-static.a make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[1]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 97%] Built target sedml-static make[1]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /usr/bin/make -f src/bindings/python/CMakeFiles/binding_python_swig.dir/build.make src/bindings/python/CMakeFiles/binding_python_swig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32 /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/bindings/python /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/bindings/python /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/bindings/python/CMakeFiles/binding_python_swig.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /usr/bin/make -f src/bindings/python/CMakeFiles/binding_python_swig.dir/build.make src/bindings/python/CMakeFiles/binding_python_swig.dir/build make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 98%] Swig Python source cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/bindings/python && /usr/bin/swig -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/bindings/python/../swig/ -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/bindings/python/../../ -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/bindings/python/../../ -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/bindings/python/../../sedml -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/bindings/python -I/usr/include/ -I/usr/include/ -c++ -python -DSWIGEXPORT -DLIBSBML_CPP_NAMESPACE_BEGIN= -DLIBSBML_CPP_NAMESPACE_END= -DLIBSBML_CPP_NAMESPACE_QUALIFIER= -DLIBSBML_CPP_NAMESPACE_USE= -DLIBNUML_CPP_NAMESPACE_BEGIN= -DLIBNUML_CPP_NAMESPACE_END= 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Python: patch loader Python: Add Version to generated file Python: create 3.x version make[1]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 98%] Built target binding_python_swig make[1]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /usr/bin/make -f tests/CMakeFiles/test_sedml.dir/build.make tests/CMakeFiles/test_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32 /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/tests /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/tests 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-grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT tests/CMakeFiles/test_sedml.dir/TestIssues.cpp.o -MF CMakeFiles/test_sedml.dir/TestIssues.cpp.o.d -o CMakeFiles/test_sedml.dir/TestIssues.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/tests/TestIssues.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 97%] Linking CXX shared library libsedml.so cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/cmake -E cmake_link_script CMakeFiles/sedml.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -lpthread -shared -Wl,-soname,libsedml.so.2 -o libsedml.so.2.0.32 CMakeFiles/sedml.dir/common/SedOperationReturnValues.cpp.o CMakeFiles/sedml.dir/common/SedmlEnumerations.cpp.o "CMakeFiles/sedml.dir/common/libsedml-version.cpp.o" CMakeFiles/sedml.dir/SedAbstractCurve.cpp.o CMakeFiles/sedml.dir/SedAbstractTask.cpp.o CMakeFiles/sedml.dir/SedAddXML.cpp.o CMakeFiles/sedml.dir/SedAdjustableParameter.cpp.o CMakeFiles/sedml.dir/SedAlgorithm.cpp.o CMakeFiles/sedml.dir/SedAlgorithmParameter.cpp.o CMakeFiles/sedml.dir/SedAnalysis.cpp.o CMakeFiles/sedml.dir/SedAppliedDimension.cpp.o CMakeFiles/sedml.dir/SedAxis.cpp.o CMakeFiles/sedml.dir/SedBase.cpp.o CMakeFiles/sedml.dir/SedBounds.cpp.o CMakeFiles/sedml.dir/SedChange.cpp.o CMakeFiles/sedml.dir/SedChangeAttribute.cpp.o CMakeFiles/sedml.dir/SedChangeXML.cpp.o CMakeFiles/sedml.dir/SedComputeChange.cpp.o CMakeFiles/sedml.dir/SedConstructorException.cpp.o CMakeFiles/sedml.dir/SedCurve.cpp.o CMakeFiles/sedml.dir/SedDataDescription.cpp.o CMakeFiles/sedml.dir/SedDataGenerator.cpp.o CMakeFiles/sedml.dir/SedDataRange.cpp.o CMakeFiles/sedml.dir/SedDataSet.cpp.o CMakeFiles/sedml.dir/SedDataSource.cpp.o CMakeFiles/sedml.dir/SedDocument.cpp.o CMakeFiles/sedml.dir/SedElementFilter.cpp.o CMakeFiles/sedml.dir/SedError.cpp.o CMakeFiles/sedml.dir/SedErrorLog.cpp.o CMakeFiles/sedml.dir/SedExperimentReference.cpp.o CMakeFiles/sedml.dir/SedFigure.cpp.o CMakeFiles/sedml.dir/SedFill.cpp.o CMakeFiles/sedml.dir/SedFitExperiment.cpp.o CMakeFiles/sedml.dir/SedFitMapping.cpp.o CMakeFiles/sedml.dir/SedFunctionalRange.cpp.o CMakeFiles/sedml.dir/SedLeastSquareObjectiveFunction.cpp.o CMakeFiles/sedml.dir/SedLine.cpp.o CMakeFiles/sedml.dir/SedListOf.cpp.o CMakeFiles/sedml.dir/SedListOfAdjustableParameters.cpp.o CMakeFiles/sedml.dir/SedListOfAlgorithmParameters.cpp.o CMakeFiles/sedml.dir/SedListOfAppliedDimensions.cpp.o CMakeFiles/sedml.dir/SedListOfChanges.cpp.o CMakeFiles/sedml.dir/SedListOfCurves.cpp.o CMakeFiles/sedml.dir/SedListOfDataDescriptions.cpp.o CMakeFiles/sedml.dir/SedListOfDataGenerators.cpp.o CMakeFiles/sedml.dir/SedListOfDataSets.cpp.o CMakeFiles/sedml.dir/SedListOfDataSources.cpp.o CMakeFiles/sedml.dir/SedListOfExperimentReferences.cpp.o CMakeFiles/sedml.dir/SedListOfFitExperiments.cpp.o CMakeFiles/sedml.dir/SedListOfFitMappings.cpp.o CMakeFiles/sedml.dir/SedListOfModels.cpp.o CMakeFiles/sedml.dir/SedListOfOutputs.cpp.o CMakeFiles/sedml.dir/SedListOfParameters.cpp.o CMakeFiles/sedml.dir/SedListOfRanges.cpp.o CMakeFiles/sedml.dir/SedListOfSetValues.cpp.o CMakeFiles/sedml.dir/SedListOfSimulations.cpp.o CMakeFiles/sedml.dir/SedListOfSlices.cpp.o CMakeFiles/sedml.dir/SedListOfStyles.cpp.o CMakeFiles/sedml.dir/SedListOfSubPlots.cpp.o CMakeFiles/sedml.dir/SedListOfSubTasks.cpp.o CMakeFiles/sedml.dir/SedListOfSurfaces.cpp.o CMakeFiles/sedml.dir/SedListOfTasks.cpp.o CMakeFiles/sedml.dir/SedListOfVariables.cpp.o CMakeFiles/sedml.dir/SedMarker.cpp.o CMakeFiles/sedml.dir/SedModel.cpp.o CMakeFiles/sedml.dir/SedNamespaces.cpp.o CMakeFiles/sedml.dir/SedObjective.cpp.o CMakeFiles/sedml.dir/SedOneStep.cpp.o CMakeFiles/sedml.dir/SedOutput.cpp.o CMakeFiles/sedml.dir/SedParameter.cpp.o CMakeFiles/sedml.dir/SedParameterEstimationReport.cpp.o CMakeFiles/sedml.dir/SedParameterEstimationResultPlot.cpp.o CMakeFiles/sedml.dir/SedParameterEstimationTask.cpp.o CMakeFiles/sedml.dir/SedPlot.cpp.o CMakeFiles/sedml.dir/SedPlot2D.cpp.o CMakeFiles/sedml.dir/SedPlot3D.cpp.o CMakeFiles/sedml.dir/SedRange.cpp.o CMakeFiles/sedml.dir/SedReader.cpp.o CMakeFiles/sedml.dir/SedRemoveXML.cpp.o CMakeFiles/sedml.dir/SedRepeatedTask.cpp.o CMakeFiles/sedml.dir/SedReport.cpp.o CMakeFiles/sedml.dir/SedSetValue.cpp.o CMakeFiles/sedml.dir/SedShadedArea.cpp.o CMakeFiles/sedml.dir/SedSimulation.cpp.o CMakeFiles/sedml.dir/SedSlice.cpp.o CMakeFiles/sedml.dir/SedSteadyState.cpp.o CMakeFiles/sedml.dir/SedStyle.cpp.o CMakeFiles/sedml.dir/SedSubPlot.cpp.o CMakeFiles/sedml.dir/SedSubTask.cpp.o CMakeFiles/sedml.dir/SedSurface.cpp.o CMakeFiles/sedml.dir/SedTask.cpp.o CMakeFiles/sedml.dir/SedTypeCodes.cpp.o CMakeFiles/sedml.dir/SedUniformRange.cpp.o CMakeFiles/sedml.dir/SedUniformTimeCourse.cpp.o CMakeFiles/sedml.dir/SedVariable.cpp.o CMakeFiles/sedml.dir/SedVectorRange.cpp.o CMakeFiles/sedml.dir/SedVisitor.cpp.o CMakeFiles/sedml.dir/SedWaterfallPlot.cpp.o CMakeFiles/sedml.dir/SedWriter.cpp.o CMakeFiles/sedml.dir/kisaomap.cpp.o /lib64/libnuml.so /usr/lib64/libsbml.so -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/cmake -E cmake_symlink_library libsedml.so.2.0.32 libsedml.so.2 libsedml.so make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[1]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 99%] Built target sedml make[1]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /usr/bin/make -f src/bindings/python/CMakeFiles/binding_python_lib.dir/build.make src/bindings/python/CMakeFiles/binding_python_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32 /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/bindings/python /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/bindings/python /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/bindings/python/CMakeFiles/binding_python_lib.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /usr/bin/make -f src/bindings/python/CMakeFiles/binding_python_lib.dir/build.make 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-march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT tests/CMakeFiles/test_sedml.dir/TestRunner.cpp.o -MF CMakeFiles/test_sedml.dir/TestRunner.cpp.o.d -o CMakeFiles/test_sedml.dir/TestRunner.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/tests/TestRunner.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [100%] Linking CXX executable test_sedml cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sedml.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -lpthread CMakeFiles/test_sedml.dir/TestIssues.cpp.o CMakeFiles/test_sedml.dir/TestRunner.cpp.o -o test_sedml ../src/sedml/libsedml-static.a -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl /lib64/libnuml.so /usr/lib64/libsbml.so make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[1]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [100%] Built target test_sedml make[1]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 99%] Building CXX object src/bindings/python/CMakeFiles/binding_python_lib.dir/libsedml_wrap.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/bindings/python && /usr/bin/g++ -DLIBSEDML_STATIC -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DSWIG_DIRECTOR_NO_UEH -DUSE_ZLIB -Dbinding_python_lib_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/bindings/python/../.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/bindings/python/../.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/bindings/python -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/bindings/python/../swig -I/usr/include/python3.13 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/bindings/python/CMakeFiles/binding_python_lib.dir/libsedml_wrap.cpp.o -MF CMakeFiles/binding_python_lib.dir/libsedml_wrap.cpp.o.d -o CMakeFiles/binding_python_lib.dir/libsedml_wrap.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/bindings/python/libsedml_wrap.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [100%] Linking CXX shared library _libsedml.so cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/bindings/python && /usr/bin/cmake -E cmake_link_script CMakeFiles/binding_python_lib.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -lpthread -shared -Wl,-soname,_libsedml.so -o _libsedml.so CMakeFiles/binding_python_lib.dir/libsedml_wrap.cpp.o ../../sedml/libsedml-static.a /lib64/libnuml.so /usr/lib64/libsbml.so -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[1]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [100%] Built target binding_python_lib make[1]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/CMakeFiles 0 make: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.bfp3sY + umask 022 + cd /builddir/build/BUILD/libsedml-2.0.32-build + '[' /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT '!=' / ']' + rm -rf /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT ++ dirname /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT + mkdir -p /builddir/build/BUILD/libsedml-2.0.32-build + mkdir /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd libSEDML-2.0.32 + /usr/bin/make install DESTDIR=/builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT 'INSTALL=/usr/bin/install -p' -C build make: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /usr/bin/cmake -S/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32 -B/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/CMakeFiles /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build//CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all make[1]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /usr/bin/make -f src/sedml/CMakeFiles/sedml.dir/build.make src/sedml/CMakeFiles/sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32 /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/CMakeFiles/sedml.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /usr/bin/make -f src/sedml/CMakeFiles/sedml.dir/build.make src/sedml/CMakeFiles/sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Nothing to be done for 'src/sedml/CMakeFiles/sedml.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 49%] Built target sedml /usr/bin/make -f src/sedml/CMakeFiles/sedml-static.dir/build.make src/sedml/CMakeFiles/sedml-static.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32 /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/CMakeFiles/sedml-static.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /usr/bin/make -f src/sedml/CMakeFiles/sedml-static.dir/build.make src/sedml/CMakeFiles/sedml-static.dir/build make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Nothing to be done for 'src/sedml/CMakeFiles/sedml-static.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 97%] Built target sedml-static /usr/bin/make -f src/bindings/python/CMakeFiles/binding_python_swig.dir/build.make src/bindings/python/CMakeFiles/binding_python_swig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32 /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/bindings/python /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/bindings/python /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/bindings/python/CMakeFiles/binding_python_swig.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /usr/bin/make -f src/bindings/python/CMakeFiles/binding_python_swig.dir/build.make src/bindings/python/CMakeFiles/binding_python_swig.dir/build make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Nothing to be done for 'src/bindings/python/CMakeFiles/binding_python_swig.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 98%] Built target binding_python_swig /usr/bin/make -f src/bindings/python/CMakeFiles/binding_python_lib.dir/build.make src/bindings/python/CMakeFiles/binding_python_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32 /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/bindings/python /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/bindings/python /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/bindings/python/CMakeFiles/binding_python_lib.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /usr/bin/make -f src/bindings/python/CMakeFiles/binding_python_lib.dir/build.make src/bindings/python/CMakeFiles/binding_python_lib.dir/build make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Nothing to be done for 'src/bindings/python/CMakeFiles/binding_python_lib.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 98%] Built target binding_python_lib /usr/bin/make -f tests/CMakeFiles/test_sedml.dir/build.make tests/CMakeFiles/test_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32 /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/tests /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/tests /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/tests/CMakeFiles/test_sedml.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /usr/bin/make -f tests/CMakeFiles/test_sedml.dir/build.make tests/CMakeFiles/test_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Nothing to be done for 'tests/CMakeFiles/test_sedml.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [100%] Built target test_sedml make[1]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/CMakeFiles 0 /usr/bin/make -f CMakeFiles/Makefile2 preinstall make[1]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[1]: Nothing to be done for 'preinstall'. make[1]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "Release" -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/share/cmake/Modules/FindLIBSEDML.cmake -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/common/SedOperationReturnValues.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/common/SedmlEnumerations.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/common/common.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/common/extern.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/common/libsedml-config.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/common/sedmlfwd.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedAbstractCurve.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedAbstractTask.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedAddXML.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedAdjustableParameter.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedAlgorithm.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedAlgorithmParameter.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedAnalysis.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedAppliedDimension.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedAxis.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedBase.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedBounds.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedChange.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedChangeAttribute.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedChangeXML.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedComputeChange.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedConstructorException.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedCurve.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedDataDescription.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedDataGenerator.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedDataRange.h -- Installing: 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2.0.32-13.fc41 --unique-debug-suffix -2.0.32-13.fc41.x86_64 --unique-debug-src-base libsedml-2.0.32-13.fc41.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32 find-debuginfo: starting Extracting debug info from 2 files DWARF-compressing 2 files sepdebugcrcfix: Updated 2 CRC32s, 0 CRC32s did match. Creating .debug symlinks for symlinks to ELF files Copying sources found by 'debugedit -l' to /usr/src/debug/libsedml-2.0.32-13.fc41.x86_64 21407 blocks find-debuginfo: done + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/build/src/sedml/common/libsedml-version.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/bindings/python/local.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/bindings/swig/ListWrapper.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedAbstractCurve.cpp is 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executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedBase.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedChange.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedChange.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedChangeAttribute.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedChangeAttribute.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedChangeXML.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedChangeXML.h is executable but has no shebang, 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./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedDataDescription.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedDataDescription.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedDataGenerator.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedDataGenerator.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedDataRange.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedDataRange.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedDataSet.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedDataSet.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedDataSource.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedDataSource.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedExperimentReference.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedExperimentReference.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedFigure.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedFigure.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedFill.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedFill.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedFunctionalRange.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedFunctionalRange.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedLeastSquareObjectiveFunction.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedLeastSquareObjectiveFunction.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedLine.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedLine.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedListOf.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedListOf.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedListOfAdjustableParameters.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedListOfAdjustableParameters.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedListOfAlgorithmParameters.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedListOfAlgorithmParameters.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedListOfChanges.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedListOfChanges.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedListOfCurves.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedListOfDataDescriptions.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedListOfDataDescriptions.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedListOfDataGenerators.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedListOfDataGenerators.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedListOfDataSets.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedListOfDataSets.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedListOfDataSources.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedListOfDataSources.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedListOfExperimentReferences.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedListOfExperimentReferences.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedListOfFitExperiments.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedListOfFitExperiments.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedListOfModels.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedListOfModels.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedListOfParameters.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedListOfParameters.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedListOfRanges.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedListOfRanges.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedListOfSetValues.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedListOfSetValues.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedListOfSimulations.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedListOfSimulations.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedListOfSlices.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedListOfSlices.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedListOfStyles.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedListOfStyles.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedListOfSubPlots.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedListOfSubPlots.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedListOfSubTasks.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedListOfSurfaces.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedListOfTasks.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedListOfTasks.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedListOfVariables.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedListOfVariables.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedMarker.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedMarker.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedModel.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedModel.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedNamespaces.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedNamespaces.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedObjective.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedObjective.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedOneStep.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedOneStep.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedParameter.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedParameter.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedParameterEstimationTask.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedParameterEstimationTask.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedPlot2D.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedPlot2D.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedPlot3D.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedPlot3D.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedRange.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedRange.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedReader.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedReader.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedRemoveXML.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedRemoveXML.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedRepeatedTask.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedRepeatedTask.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedReport.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedReport.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedSetValue.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedSetValue.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedShadedArea.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedShadedArea.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedSimulation.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedSimulation.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedSteadyState.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedSteadyState.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedStyle.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedStyle.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedSubPlot.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedSubPlot.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedSubTask.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedSubTask.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedTask.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedTask.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedUniformRange.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedUniformRange.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedUniformTimeCourse.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedUniformTimeCourse.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedVariable.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedVariable.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedVectorRange.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedVectorRange.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedWriter.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/SedWriter.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/common/SedOperationReturnValues.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/common/SedOperationReturnValues.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/common/SedmlEnumerations.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/common/SedmlEnumerations.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/common/common.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc41.x86_64/src/sedml/common/libsedml-version.cpp is executable but has no shebang, removing executable bit + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j2 Bytecompiling .py files below /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/lib64/python3.13 using python3.13 Bytecompiling .py files below /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/lib/debug/usr/lib64/python3.13 using python3.13 + /usr/lib/rpm/redhat/brp-python-hardlink + /usr/bin/add-determinism --brp -j2 /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/lib64/libsedml-static.a: replacing with normalized version /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/lib64/python3.13/site-packages/libsedml/__pycache__/libsedml.cpython-313.pyc: rewriting with normalized contents Scanned 36 directories and 334 files, processed 2 inodes, 2 modified (1 replaced + 1 rewritten), 0 unsupported format, 0 errors Reading /builddir/build/BUILD/libsedml-2.0.32-build/SPECPARTS/rpm-debuginfo.specpart Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.Xntghk + umask 022 + cd /builddir/build/BUILD/libsedml-2.0.32-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd libSEDML-2.0.32 + make test -C build make: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' Running tests... /usr/bin/ctest --force-new-ctest-process Test project /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build Start 1: test_sedml_run 1/1 Test #1: test_sedml_run ................... Passed 0.03 sec 100% tests passed, 0 tests failed out of 1 Total Test time (real) = 0.03 sec make: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' + RPM_EC=0 ++ jobs -p + exit 0 Processing files: libsedml-2.0.32-13.fc41.x86_64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.wtKV9E + umask 022 + cd /builddir/build/BUILD/libsedml-2.0.32-build + cd libSEDML-2.0.32 + DOCDIR=/builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/share/doc/libsedml + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/share/doc/libsedml + cp -pr /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/NEWS.md /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/share/doc/libsedml + cp -pr /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/README.md /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/share/doc/libsedml + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.3BNUqy + umask 022 + cd /builddir/build/BUILD/libsedml-2.0.32-build + cd libSEDML-2.0.32 + LICENSEDIR=/builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/share/licenses/libsedml + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/share/licenses/libsedml + cp -pr /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/LICENSE.txt /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/share/licenses/libsedml + RPM_EC=0 ++ jobs -p + exit 0 Provides: libsedml = 2:2.0.32-13.fc41 libsedml(x86-64) = 2:2.0.32-13.fc41 libsedml.so.2()(64bit) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.4)(64bit) libc.so.6(GLIBC_ABI_DT_RELR)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libnuml.so.1()(64bit) libsbml.so.5()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) rtld(GNU_HASH) Obsoletes: R-SEDML < 2:2.0.32-1 java-SEDML < 2:2.0.32-1 libsedml-sharp < 2:2.0.32-1 octave-SEDML < 2:2.0.32-1 perl-SEDML < 2:2.0.32-1 python2-libsedml < 2:2.0.32-1 ruby-SEDML < 2:2.0.32-1 Processing files: libsedml-devel-2.0.32-13.fc41.x86_64 Provides: libsedml-devel = 2:2.0.32-13.fc41 libsedml-devel(x86-64) = 2:2.0.32-13.fc41 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libsedml.so.2()(64bit) Processing files: libsedml-static-2.0.32-13.fc41.x86_64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.KPBEyS + umask 022 + cd /builddir/build/BUILD/libsedml-2.0.32-build + cd libSEDML-2.0.32 + DOCDIR=/builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/share/doc/libsedml + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/share/doc/libsedml + cp -pr /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/NEWS.md /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/share/doc/libsedml + cp -pr /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/README.md /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/share/doc/libsedml + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.ONYbiK + umask 022 + cd /builddir/build/BUILD/libsedml-2.0.32-build + cd libSEDML-2.0.32 + LICENSEDIR=/builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/share/licenses/libsedml + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/share/licenses/libsedml + cp -pr /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/LICENSE.txt /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/share/licenses/libsedml + RPM_EC=0 ++ jobs -p + exit 0 Provides: libsedml-static = 2:2.0.32-13.fc41 libsedml-static(x86-64) = 2:2.0.32-13.fc41 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: python3-libsedml-2.0.32-13.fc41.x86_64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.Fad7Wv + umask 022 + cd /builddir/build/BUILD/libsedml-2.0.32-build + cd libSEDML-2.0.32 + DOCDIR=/builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/share/doc/libsedml + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/share/doc/libsedml + cp -pr /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/NEWS.md /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/share/doc/libsedml + cp -pr /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/README.md /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/share/doc/libsedml + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.fSCBch + umask 022 + cd /builddir/build/BUILD/libsedml-2.0.32-build + cd libSEDML-2.0.32 + LICENSEDIR=/builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/share/licenses/libsedml + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/share/licenses/libsedml + cp -pr /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/LICENSE.txt /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/share/licenses/libsedml + RPM_EC=0 ++ jobs -p + exit 0 Provides: python-libsedml = 2:2.0.32-13.fc41 python3-libsedml = 2:2.0.32-13.fc41 python3-libsedml(x86-64) = 2:2.0.32-13.fc41 python3.13-libsedml = 2:2.0.32-13.fc41 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.4)(64bit) libc.so.6(GLIBC_ABI_DT_RELR)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libnuml.so.1()(64bit) libsbml.so.5()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.2)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) python(abi) = 3.13 rtld(GNU_HASH) Obsoletes: python-libsedml < 2:2.0.32-13.fc41 Processing files: libsedml-debugsource-2.0.32-13.fc41.x86_64 Provides: libsedml-debugsource = 2:2.0.32-13.fc41 libsedml-debugsource(x86-64) = 2:2.0.32-13.fc41 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: libsedml-debuginfo-2.0.32-13.fc41.x86_64 Provides: debuginfo(build-id) = 5ab5f404551ce9f8ecab2a159779c0a12f7f8f98 libsedml-debuginfo = 2:2.0.32-13.fc41 libsedml-debuginfo(x86-64) = 2:2.0.32-13.fc41 libsedml.so.2.0.32-2.0.32-13.fc41.x86_64.debug()(64bit) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: libsedml-debugsource(x86-64) = 2:2.0.32-13.fc41 Processing files: python3-libsedml-debuginfo-2.0.32-13.fc41.x86_64 Provides: debuginfo(build-id) = 6c1c2db866f6e17a212baff3c9eaa8a80ab11e22 python-libsedml-debuginfo = 2:2.0.32-13.fc41 python3-libsedml-debuginfo = 2:2.0.32-13.fc41 python3-libsedml-debuginfo(x86-64) = 2:2.0.32-13.fc41 python3.13-libsedml-debuginfo = 2:2.0.32-13.fc41 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: libsedml-debugsource(x86-64) = 2:2.0.32-13.fc41 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT Wrote: /builddir/build/RPMS/libsedml-debuginfo-2.0.32-13.fc41.x86_64.rpm Wrote: /builddir/build/RPMS/libsedml-debugsource-2.0.32-13.fc41.x86_64.rpm Wrote: /builddir/build/RPMS/python3-libsedml-debuginfo-2.0.32-13.fc41.x86_64.rpm Wrote: /builddir/build/RPMS/libsedml-static-2.0.32-13.fc41.x86_64.rpm Wrote: /builddir/build/RPMS/python3-libsedml-2.0.32-13.fc41.x86_64.rpm Wrote: /builddir/build/RPMS/libsedml-2.0.32-13.fc41.x86_64.rpm Wrote: /builddir/build/RPMS/libsedml-devel-2.0.32-13.fc41.x86_64.rpm Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.k6FvK1 + umask 022 + cd /builddir/build/BUILD/libsedml-2.0.32-build + test -d /builddir/build/BUILD/libsedml-2.0.32-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/libsedml-2.0.32-build + rm -rf /builddir/build/BUILD/libsedml-2.0.32-build + RPM_EC=0 ++ jobs -p + exit 0 Finish: rpmbuild libsedml-2.0.32-13.fc41.src.rpm Finish: build phase for libsedml-2.0.32-13.fc41.src.rpm INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-41-x86_64-1729099389.469766/root/var/log/dnf5.log INFO: Done(/var/lib/copr-rpmbuild/results/libsedml-2.0.32-13.fc41.src.rpm) Config(child) 4 minutes 37 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool Package info: { "packages": [ { "name": "libsedml", "epoch": 2, "version": "2.0.32", "release": "13.fc41", "arch": "x86_64" }, { "name": "python3-libsedml-debuginfo", "epoch": 2, "version": "2.0.32", "release": "13.fc41", "arch": "x86_64" }, { "name": "libsedml-devel", "epoch": 2, "version": "2.0.32", "release": "13.fc41", "arch": "x86_64" }, { "name": "libsedml-debuginfo", "epoch": 2, "version": "2.0.32", "release": "13.fc41", "arch": "x86_64" }, { "name": "libsedml-debugsource", "epoch": 2, "version": "2.0.32", "release": "13.fc41", "arch": "x86_64" }, { "name": "python3-libsedml", "epoch": 2, "version": "2.0.32", "release": "13.fc41", "arch": "x86_64" }, { "name": "libsedml", "epoch": 2, "version": "2.0.32", "release": "13.fc41", "arch": "src" }, { "name": "libsedml-static", "epoch": 2, "version": "2.0.32", "release": "13.fc41", "arch": "x86_64" } ] } RPMResults finished