Package ij.plugin

Class ChannelArranger

java.lang.Object
ij.plugin.ChannelArranger
All Implemented Interfaces:
PlugIn, TextListener, EventListener

public class ChannelArranger extends Object implements PlugIn, TextListener
This plugin implements the Image/Colors/Arrange Channels command, which allows the user to change the order of channels.
Author:
Norbert Vischer <vischer@science.uva.nl> 23-sep-2012
  • Constructor Details

    • ChannelArranger

      public ChannelArranger()
  • Method Details

    • run

      public void run(String arg)
      Description copied from interface: PlugIn
      This method is called when the plugin is loaded. 'arg', which may be blank, is the argument specified for this plugin in IJ_Props.txt.
      Specified by:
      run in interface PlugIn
    • run

      public static ImagePlus run(ImagePlus img, int[] newOrder)
      Changes the order of the channels in a hyperstack.
      Parameters:
      img - source hyperstack
      newOrder - the new channel order
      Returns:
      a hyperstack with channels in the specified order

      The following example opens the FluorescentCells sample image and reverses the order of the channels.

                      ImagePlus img = IJ.openImage("http://imagej.nih.gov/ij/images/FluorescentCells.zip");
                      int[] order = {3,2,1};
                      ImagePlus img2 = ChannelArranger.run(img, order);
                      img2.setDisplayMode(IJ.COLOR);
                      img2.show();
                      
    • textValueChanged

      public void textValueChanged(TextEvent e)
      Specified by:
      textValueChanged in interface TextListener