Warning: Permanently added '2620:52:3:1:dead:beef:cafe:c110' (ED25519) to the list of known hosts. You can reproduce this build on your computer by running: sudo dnf install copr-rpmbuild /usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/6118052-fedora-rawhide-x86_64 --chroot fedora-rawhide-x86_64 Version: 0.68 PID: 5170 Logging PID: 5171 Task: {'appstream': False, 'background': True, 'build_id': 6118052, 'buildroot_pkgs': [], 'chroot': 'fedora-rawhide-x86_64', 'enable_net': False, 'fedora_review': False, 'git_hash': '20669bbb8e88c325cf6e5f2f5252564311d54ba3', 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/jwakely/tbb-refresh/openms', 'isolation': 'default', 'memory_reqs': 2048, 'package_name': 'openms', 'package_version': '2.8.0-0.5', 'project_dirname': 'tbb-refresh', 'project_name': 'tbb-refresh', 'project_owner': 'jwakely', 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/jwakely/tbb-refresh/fedora-rawhide-x86_64/', 'id': 'copr_base', 'name': 'Copr repository'}], 'sandbox': 'jwakely/tbb-refresh--jwakely', 'source_json': {}, 'source_type': None, 'submitter': 'jwakely', 'tags': [], 'task_id': '6118052-fedora-rawhide-x86_64', 'timeout': 115200, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/jwakely/tbb-refresh/openms /var/lib/copr-rpmbuild/workspace/workdir-xex0x358/openms --depth 500 --no-single-branch --recursive cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/jwakely/tbb-refresh/openms', '/var/lib/copr-rpmbuild/workspace/workdir-xex0x358/openms', '--depth', '500', '--no-single-branch', '--recursive'] cwd: . rc: 0 stdout: stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-xex0x358/openms'... Running: git checkout 20669bbb8e88c325cf6e5f2f5252564311d54ba3 -- cmd: ['git', 'checkout', '20669bbb8e88c325cf6e5f2f5252564311d54ba3', '--'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-xex0x358/openms rc: 0 stdout: stderr: Note: switching to '20669bbb8e88c325cf6e5f2f5252564311d54ba3'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at 20669bb automatic import of openms Running: copr-distgit-client sources /usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated cmd: ['copr-distgit-client', 'sources'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-xex0x358/openms rc: 0 stdout: stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD INFO: Reading sources specification file: sources INFO: Downloading INIFileEditor.png INFO: Calling: curl -H Pragma: -o INIFileEditor.png --location --remote-time --show-error --fail https://copr-dist-git.fedorainfracloud.org/repo/pkgs/jwakely/tbb-refresh/openms/INIFileEditor.png/md5/3e88489b48077034550f4446e1cb78a5/INIFileEditor.png % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 7036 100 7036 0 0 140k 0 --:--:-- --:--:-- --:--:-- 143k INFO: Reading stdout from command: md5sum INIFileEditor.png INFO: Downloading OpenMS-2.8.0-src.tar.gz INFO: Calling: curl -H Pragma: -o OpenMS-2.8.0-src.tar.gz --location --remote-time --show-error --fail https://copr-dist-git.fedorainfracloud.org/repo/pkgs/jwakely/tbb-refresh/openms/OpenMS-2.8.0-src.tar.gz/md5/1b4e6924959c4d06aedeaf05adcc64b7/OpenMS-2.8.0-src.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 283M 100 283M 0 0 9452k 0 0:00:30 0:00:30 --:--:-- 7767k INFO: Reading stdout from command: md5sum OpenMS-2.8.0-src.tar.gz INFO: Downloading TOPPAS.png INFO: Calling: curl -H Pragma: -o TOPPAS.png --location --remote-time --show-error --fail https://copr-dist-git.fedorainfracloud.org/repo/pkgs/jwakely/tbb-refresh/openms/TOPPAS.png/md5/05d43107a9fe75b3cdbe2e95a6c11f5f/TOPPAS.png % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 5997 100 5997 0 0 90823 0 --:--:-- --:--:-- --:--:-- 92261 INFO: Reading stdout from command: md5sum TOPPAS.png INFO: Downloading TOPPView.png INFO: Calling: curl -H Pragma: -o TOPPView.png --location --remote-time --show-error --fail https://copr-dist-git.fedorainfracloud.org/repo/pkgs/jwakely/tbb-refresh/openms/TOPPView.png/md5/676662e3b7e6257d71b520f8a9f1cecc/TOPPView.png % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 8884 100 8884 0 0 181k 0 --:--:-- --:--:-- --:--:-- 184k INFO: Reading stdout from command: md5sum TOPPView.png Running (timeout=115200): unbuffer mock --buildsrpm --spec /var/lib/copr-rpmbuild/workspace/workdir-xex0x358/openms/openms.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-xex0x358/openms --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1687862083.251117 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 4.1 starting (python version = 3.11.3, NVR = mock-4.1-1.fc38)... Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-xex0x358/openms/openms.spec) Config(fedora-rawhide-x86_64) Start: clean chroot Finish: clean chroot Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1687862083.251117/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: enabled HW Info plugin Mock Version: 4.1 INFO: Mock Version: 4.1 INFO: Package manager dnf detected and used (fallback) Start(bootstrap): installing dnf tooling No matches found for the following disable plugin patterns: local, spacewalk, versionlock Updating Subscription Management repositories. Unable to read consumer identity This system is not registered with an entitlement server. You can use subscription-manager to register. Copr repository 103 kB/s | 14 kB 00:00 fedora 3.8 MB/s | 71 MB 00:18 Dependencies resolved. ================================================================================ Package Arch Version Repo Size ================================================================================ Installing: dnf-plugins-core noarch 4.4.1-3.fc39 fedora 38 k python3-dnf noarch 4.16.1-2.fc39 fedora 604 k Installing dependencies: alternatives x86_64 1.24-1.fc39 fedora 39 k audit-libs x86_64 3.1.1-1.fc39 fedora 117 k basesystem noarch 11-17.fc39 fedora 7.0 k bash x86_64 5.2.15-3.fc38 fedora 1.8 M bzip2-libs x86_64 1.0.8-13.fc38 fedora 41 k ca-certificates noarch 2023.2.60-2.fc38 fedora 845 k coreutils x86_64 9.3-1.fc39 fedora 1.1 M coreutils-common x86_64 9.3-1.fc39 fedora 2.1 M crypto-policies noarch 20230614-1.git5f3458e.fc39 fedora 94 k curl x86_64 8.1.2-1.fc39 fedora 345 k cyrus-sasl-lib x86_64 2.1.28-10.fc39 fedora 792 k dbus-libs x86_64 1:1.14.8-1.fc39 fedora 156 k dnf-data noarch 4.16.1-2.fc39 fedora 38 k elfutils-default-yama-scope noarch 0.189-2.fc39 fedora 15 k elfutils-libelf x86_64 0.189-2.fc39 fedora 196 k elfutils-libs x86_64 0.189-2.fc39 fedora 260 k expat x86_64 2.5.0-2.fc38 fedora 110 k fedora-gpg-keys noarch 39-0.1 fedora 126 k fedora-release noarch 39-0.14 fedora 6.6 k fedora-release-common noarch 39-0.14 fedora 17 k fedora-release-identity-basic noarch 39-0.14 fedora 7.4 k fedora-repos noarch 39-0.1 fedora 9.4 k fedora-repos-rawhide noarch 39-0.1 fedora 9.0 k file-libs x86_64 5.44-3.fc39 fedora 730 k filesystem x86_64 3.18-4.fc39 fedora 1.1 M findutils x86_64 1:4.9.0-4.fc39 fedora 491 k fmt x86_64 9.1.0-2.fc38 fedora 117 k gawk x86_64 5.2.2-1.fc39 fedora 1.1 M gdbm-libs x86_64 1:1.23-3.fc38 fedora 56 k glib2 x86_64 2.76.3-1.fc39 fedora 2.8 M glibc x86_64 2.37.9000-14.fc39 fedora 2.2 M glibc-common x86_64 2.37.9000-14.fc39 fedora 339 k glibc-minimal-langpack x86_64 2.37.9000-14.fc39 fedora 59 k gmp x86_64 1:6.2.1-4.fc38 fedora 313 k gnupg2 x86_64 2.4.2-2.fc39 fedora 2.6 M gnutls x86_64 3.8.0-6.fc39 fedora 1.1 M gpgme x86_64 1.17.1-5.fc39 fedora 206 k grep x86_64 3.11-1.fc39 fedora 298 k ima-evm-utils x86_64 1.5-1.fc39 fedora 63 k json-c x86_64 0.16-4.fc38 fedora 41 k keyutils-libs x86_64 1.6.1-6.fc38 fedora 31 k krb5-libs x86_64 1.21-1.fc39 fedora 765 k libacl x86_64 2.3.1-7.fc39 fedora 23 k libarchive x86_64 3.6.1-5.fc39 fedora 400 k libassuan x86_64 2.5.6-1.fc39 fedora 67 k libattr x86_64 2.5.1-7.fc39 fedora 18 k libb2 x86_64 0.98.1-8.fc38 fedora 25 k libblkid x86_64 2.39-4.fc39 fedora 116 k libbrotli x86_64 1.0.9-11.fc38 fedora 317 k libcap x86_64 2.48-6.fc38 fedora 67 k libcap-ng x86_64 0.8.3-5.fc38 fedora 32 k libcom_err x86_64 1.47.0-1.fc39 fedora 26 k libcomps x86_64 0.1.19-1.fc39 fedora 77 k libcurl x86_64 8.1.2-1.fc39 fedora 323 k libdnf x86_64 0.70.1-3.fc39 fedora 667 k libdnf5 x86_64 5.0.14-1.fc39 fedora 866 k libeconf x86_64 0.4.0-5.fc38 fedora 27 k libevent x86_64 2.1.12-8.fc38 fedora 257 k libffi x86_64 3.4.4-2.fc38 fedora 38 k libfsverity x86_64 1.4-9.fc38 fedora 19 k libgcc x86_64 13.1.1-4.fc39 fedora 107 k libgcrypt x86_64 1.10.2-1.fc39 fedora 514 k libgomp x86_64 13.1.1-4.fc39 fedora 317 k libgpg-error x86_64 1.47-1.fc39 fedora 230 k libidn2 x86_64 2.3.4-2.fc38 fedora 160 k libksba x86_64 1.6.4-1.fc39 fedora 159 k libmodulemd x86_64 2.15.0-3.fc39 fedora 232 k libmount x86_64 2.39-4.fc39 fedora 155 k libnghttp2 x86_64 1.54.0-1.fc39 fedora 75 k libnsl2 x86_64 2.0.0-5.fc38 fedora 30 k libpsl x86_64 0.21.2-3.fc39 fedora 63 k librepo x86_64 1.15.1-2.fc38 fedora 96 k libreport-filesystem noarch 2.17.10-1.fc39 fedora 14 k libselinux x86_64 3.5-1.fc39 fedora 87 k libsemanage x86_64 3.5-2.fc39 fedora 120 k libsepol x86_64 3.5-1.fc39 fedora 324 k libsigsegv x86_64 2.14-4.fc38 fedora 27 k libsmartcols x86_64 2.39-4.fc39 fedora 67 k libsolv x86_64 0.7.24-4.fc39 fedora 425 k libssh x86_64 0.10.5-1.fc39 fedora 211 k libssh-config noarch 0.10.5-1.fc39 fedora 9.0 k libstdc++ x86_64 13.1.1-4.fc39 fedora 861 k libtasn1 x86_64 4.19.0-2.fc38 fedora 74 k libtirpc x86_64 1.3.3-1.rc1.fc39 fedora 93 k libunistring x86_64 1.1-3.fc38 fedora 545 k libunistring1.0 x86_64 1.0-1.fc38 fedora 539 k libuuid x86_64 2.39-4.fc39 fedora 28 k libverto x86_64 0.3.2-5.fc38 fedora 21 k libxcrypt x86_64 4.4.35-1.fc39 fedora 119 k libxml2 x86_64 2.10.4-1.fc39 fedora 700 k libyaml x86_64 0.2.5-9.fc38 fedora 59 k libzstd x86_64 1.5.5-1.fc39 fedora 308 k lua-libs x86_64 5.4.4-9.fc39 fedora 133 k lz4-libs x86_64 1.9.4-3.fc39 fedora 67 k mpdecimal x86_64 2.5.1-6.fc38 fedora 89 k mpfr x86_64 4.1.1-3.fc38 fedora 600 k ncurses-base noarch 6.4-4.20230520.fc39 fedora 86 k ncurses-libs x86_64 6.4-4.20230520.fc39 fedora 336 k nettle x86_64 3.9.1-1.fc39 fedora 425 k npth x86_64 1.6-13.fc39 fedora 24 k openldap x86_64 2.6.4-2.fc39 fedora 255 k openssl-libs x86_64 1:3.0.8-2.fc39 fedora 2.1 M p11-kit x86_64 0.24.1-6.fc38 fedora 359 k p11-kit-trust x86_64 0.24.1-6.fc38 fedora 136 k pcre2 x86_64 10.42-1.fc38.1 fedora 234 k pcre2-syntax noarch 10.42-1.fc38.1 fedora 144 k popt x86_64 1.19-2.fc38 fedora 67 k publicsuffix-list-dafsa noarch 20230614-1.fc39 fedora 57 k python-pip-wheel noarch 23.1.2-1.fc39 fedora 1.4 M python-setuptools-wheel noarch 67.7.2-2.fc39 fedora 661 k python3 x86_64 3.11.4-1.fc39 fedora 28 k python3-dateutil noarch 1:2.8.2-6.fc39 fedora 360 k python3-dbus x86_64 1.3.2-2.fc38 fedora 157 k python3-distro noarch 1.8.0-4.fc39 fedora 49 k python3-dnf-plugins-core noarch 4.4.1-3.fc39 fedora 299 k python3-gpg x86_64 1.17.1-5.fc39 fedora 295 k python3-hawkey x86_64 0.70.1-3.fc39 fedora 107 k python3-libcomps x86_64 0.1.19-1.fc39 fedora 47 k python3-libdnf x86_64 0.70.1-3.fc39 fedora 826 k python3-libs x86_64 3.11.4-1.fc39 fedora 9.6 M python3-rpm x86_64 4.18.91-1.fc39 fedora 67 k python3-six noarch 1.16.0-9.fc38 fedora 42 k python3-systemd x86_64 235-2.fc38 fedora 108 k readline x86_64 8.2-3.fc38 fedora 212 k rpm x86_64 4.18.91-1.fc39 fedora 528 k rpm-build-libs x86_64 4.18.91-1.fc39 fedora 95 k rpm-libs x86_64 4.18.91-1.fc39 fedora 308 k rpm-sequoia x86_64 1.4.0-3.fc39 fedora 848 k rpm-sign-libs x86_64 4.18.91-1.fc39 fedora 26 k sed x86_64 4.8-12.fc38 fedora 306 k setup noarch 2.14.3-3.fc39 fedora 152 k shadow-utils x86_64 2:4.13-7.fc39 fedora 1.3 M sqlite-libs x86_64 3.41.2-3.fc39 fedora 669 k systemd-libs x86_64 253.5-6.fc39 fedora 652 k tpm2-tss x86_64 4.0.1-3.fc38 fedora 675 k tzdata noarch 2023c-1.fc39 fedora 718 k xz-libs x86_64 5.4.3-1.fc39 fedora 108 k zchunk-libs x86_64 1.3.1-1.fc39 fedora 52 k zlib x86_64 1.2.13-3.fc38 fedora 95 k Transaction Summary ================================================================================ Install 141 Packages Total download size: 59 M Installed size: 205 M Downloading Packages: (1/141): basesystem-11-17.fc39.noarch.rpm 60 kB/s | 7.0 kB 00:00 (2/141): alternatives-1.24-1.fc39.x86_64.rpm 251 kB/s | 39 kB 00:00 (3/141): bzip2-libs-1.0.8-13.fc38.x86_64.rpm 1.0 MB/s | 41 kB 00:00 (4/141): audit-libs-3.1.1-1.fc39.x86_64.rpm 510 kB/s | 117 kB 00:00 (5/141): ca-certificates-2023.2.60-2.fc38.noarc 5.1 MB/s | 845 kB 00:00 (6/141): coreutils-9.3-1.fc39.x86_64.rpm 7.1 MB/s | 1.1 MB 00:00 (7/141): bash-5.2.15-3.fc38.x86_64.rpm 5.9 MB/s | 1.8 MB 00:00 (8/141): crypto-policies-20230614-1.git5f3458e. 2.3 MB/s | 94 kB 00:00 (9/141): coreutils-common-9.3-1.fc39.x86_64.rpm 22 MB/s | 2.1 MB 00:00 (10/141): curl-8.1.2-1.fc39.x86_64.rpm 7.4 MB/s | 345 kB 00:00 (11/141): cyrus-sasl-lib-2.1.28-10.fc39.x86_64. 15 MB/s | 792 kB 00:00 (12/141): dbus-libs-1.14.8-1.fc39.x86_64.rpm 3.8 MB/s | 156 kB 00:00 (13/141): dnf-data-4.16.1-2.fc39.noarch.rpm 997 kB/s | 38 kB 00:00 (14/141): dnf-plugins-core-4.4.1-3.fc39.noarch. 1.0 MB/s | 38 kB 00:00 (15/141): elfutils-default-yama-scope-0.189-2.f 394 kB/s | 15 kB 00:00 (16/141): elfutils-libelf-0.189-2.fc39.x86_64.r 4.8 MB/s | 196 kB 00:00 (17/141): elfutils-libs-0.189-2.fc39.x86_64.rpm 6.0 MB/s | 260 kB 00:00 (18/141): expat-2.5.0-2.fc38.x86_64.rpm 2.7 MB/s | 110 kB 00:00 (19/141): fedora-gpg-keys-39-0.1.noarch.rpm 3.2 MB/s | 126 kB 00:00 (20/141): fedora-release-39-0.14.noarch.rpm 176 kB/s | 6.6 kB 00:00 (21/141): fedora-release-common-39-0.14.noarch. 426 kB/s | 17 kB 00:00 (22/141): fedora-release-identity-basic-39-0.14 196 kB/s | 7.4 kB 00:00 (23/141): fedora-repos-39-0.1.noarch.rpm 241 kB/s | 9.4 kB 00:00 (24/141): fedora-repos-rawhide-39-0.1.noarch.rp 235 kB/s | 9.0 kB 00:00 (25/141): file-libs-5.44-3.fc39.x86_64.rpm 15 MB/s | 730 kB 00:00 (26/141): filesystem-3.18-4.fc39.x86_64.rpm 20 MB/s | 1.1 MB 00:00 (27/141): findutils-4.9.0-4.fc39.x86_64.rpm 10 MB/s | 491 kB 00:00 (28/141): fmt-9.1.0-2.fc38.x86_64.rpm 2.8 MB/s | 117 kB 00:00 (29/141): gdbm-libs-1.23-3.fc38.x86_64.rpm 1.1 MB/s | 56 kB 00:00 (30/141): gawk-5.2.2-1.fc39.x86_64.rpm 10 MB/s | 1.1 MB 00:00 (31/141): glibc-2.37.9000-14.fc39.x86_64.rpm 26 MB/s | 2.2 MB 00:00 (32/141): glibc-common-2.37.9000-14.fc39.x86_64 7.4 MB/s | 339 kB 00:00 (33/141): glib2-2.76.3-1.fc39.x86_64.rpm 21 MB/s | 2.8 MB 00:00 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libblkid-2.39-4.fc39.x86_64.rpm 2.9 MB/s | 116 kB 00:00 (50/141): libbrotli-1.0.9-11.fc38.x86_64.rpm 6.9 MB/s | 317 kB 00:00 (51/141): libcap-2.48-6.fc38.x86_64.rpm 1.7 MB/s | 67 kB 00:00 (52/141): libcap-ng-0.8.3-5.fc38.x86_64.rpm 851 kB/s | 32 kB 00:00 (53/141): libcom_err-1.47.0-1.fc39.x86_64.rpm 686 kB/s | 26 kB 00:00 (54/141): libcomps-0.1.19-1.fc39.x86_64.rpm 1.9 MB/s | 77 kB 00:00 (55/141): libcurl-8.1.2-1.fc39.x86_64.rpm 7.3 MB/s | 323 kB 00:00 (56/141): libdnf-0.70.1-3.fc39.x86_64.rpm 13 MB/s | 667 kB 00:00 (57/141): libdnf5-5.0.14-1.fc39.x86_64.rpm 15 MB/s | 866 kB 00:00 (58/141): libeconf-0.4.0-5.fc38.x86_64.rpm 713 kB/s | 27 kB 00:00 (59/141): libevent-2.1.12-8.fc38.x86_64.rpm 6.0 MB/s | 257 kB 00:00 (60/141): libffi-3.4.4-2.fc38.x86_64.rpm 1.0 MB/s | 38 kB 00:00 (61/141): libfsverity-1.4-9.fc38.x86_64.rpm 495 kB/s | 19 kB 00:00 (62/141): libgcc-13.1.1-4.fc39.x86_64.rpm 2.7 MB/s | 107 kB 00:00 (63/141): libgcrypt-1.10.2-1.fc39.x86_64.rpm 12 MB/s | 514 kB 00:00 (64/141): 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Fingerprint: 6A51 BBAB BA3D 5467 B617 1221 809A 8D7C EB10 B464 From : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-38-primary Key imported successfully Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Running scriptlet: filesystem-3.18-4.fc39.x86_64 1/1 Preparing : 1/1 Installing : libgcc-13.1.1-4.fc39.x86_64 1/141 Running scriptlet: libgcc-13.1.1-4.fc39.x86_64 1/141 Installing : tzdata-2023c-1.fc39.noarch 2/141 Installing : crypto-policies-20230614-1.git5f3458e.fc39.noarc 3/141 Running scriptlet: crypto-policies-20230614-1.git5f3458e.fc39.noarc 3/141 Installing : fedora-release-identity-basic-39-0.14.noarch 4/141 Installing : python-setuptools-wheel-67.7.2-2.fc39.noarch 5/141 Installing : publicsuffix-list-dafsa-20230614-1.fc39.noarch 6/141 Installing : pcre2-syntax-10.42-1.fc38.1.noarch 7/141 Installing : ncurses-base-6.4-4.20230520.fc39.noarch 8/141 Installing : libssh-config-0.10.5-1.fc39.noarch 9/141 Installing : libreport-filesystem-2.17.10-1.fc39.noarch 10/141 Installing : fedora-gpg-keys-39-0.1.noarch 11/141 Installing : fedora-release-39-0.14.noarch 12/141 Installing : fedora-release-common-39-0.14.noarch 13/141 Installing : 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gnupg2-2.4.2-2.fc39.x86_64 119/141 Installing : gpgme-1.17.1-5.fc39.x86_64 120/141 Installing : librepo-1.15.1-2.fc38.x86_64 121/141 Installing : python3-gpg-1.17.1-5.fc39.x86_64 122/141 Installing : ima-evm-utils-1.5-1.fc39.x86_64 123/141 Installing : curl-8.1.2-1.fc39.x86_64 124/141 Installing : libfsverity-1.4-9.fc38.x86_64 125/141 Installing : rpm-sequoia-1.4.0-3.fc39.x86_64 126/141 Installing : rpm-libs-4.18.91-1.fc39.x86_64 127/141 Installing : libmodulemd-2.15.0-3.fc39.x86_64 128/141 Installing : libsolv-0.7.24-4.fc39.x86_64 129/141 Installing : libdnf-0.70.1-3.fc39.x86_64 130/141 Installing : python3-libdnf-0.70.1-3.fc39.x86_64 131/141 Installing : python3-hawkey-0.70.1-3.fc39.x86_64 132/141 Installing : libdnf5-5.0.14-1.fc39.x86_64 133/141 warning: /etc/dnf/dnf.conf created as /etc/dnf/dnf.conf.rpmnew Installing : dnf-data-4.16.1-2.fc39.noarch 134/141 Installing : rpm-build-libs-4.18.91-1.fc39.x86_64 135/141 Installing : rpm-sign-libs-4.18.91-1.fc39.x86_64 136/141 Installing : python3-rpm-4.18.91-1.fc39.x86_64 137/141 Installing : python3-dnf-4.16.1-2.fc39.noarch 138/141 Installing : python3-dnf-plugins-core-4.4.1-3.fc39.noarch 139/141 Installing : dnf-plugins-core-4.4.1-3.fc39.noarch 140/141 Running scriptlet: rpm-4.18.91-1.fc39.x86_64 141/141 Installing : rpm-4.18.91-1.fc39.x86_64 141/141 Running scriptlet: filesystem-3.18-4.fc39.x86_64 141/141 Running scriptlet: ca-certificates-2023.2.60-2.fc38.noarch 141/141 Running scriptlet: rpm-4.18.91-1.fc39.x86_64 141/141 Verifying : alternatives-1.24-1.fc39.x86_64 1/141 Verifying : audit-libs-3.1.1-1.fc39.x86_64 2/141 Verifying : basesystem-11-17.fc39.noarch 3/141 Verifying : bash-5.2.15-3.fc38.x86_64 4/141 Verifying : bzip2-libs-1.0.8-13.fc38.x86_64 5/141 Verifying : ca-certificates-2023.2.60-2.fc38.noarch 6/141 Verifying : coreutils-9.3-1.fc39.x86_64 7/141 Verifying : coreutils-common-9.3-1.fc39.x86_64 8/141 Verifying : crypto-policies-20230614-1.git5f3458e.fc39.noarc 9/141 Verifying : curl-8.1.2-1.fc39.x86_64 10/141 Verifying : cyrus-sasl-lib-2.1.28-10.fc39.x86_64 11/141 Verifying : dbus-libs-1:1.14.8-1.fc39.x86_64 12/141 Verifying : dnf-data-4.16.1-2.fc39.noarch 13/141 Verifying : dnf-plugins-core-4.4.1-3.fc39.noarch 14/141 Verifying : elfutils-default-yama-scope-0.189-2.fc39.noarch 15/141 Verifying : elfutils-libelf-0.189-2.fc39.x86_64 16/141 Verifying : elfutils-libs-0.189-2.fc39.x86_64 17/141 Verifying : expat-2.5.0-2.fc38.x86_64 18/141 Verifying : fedora-gpg-keys-39-0.1.noarch 19/141 Verifying : fedora-release-39-0.14.noarch 20/141 Verifying : fedora-release-common-39-0.14.noarch 21/141 Verifying : fedora-release-identity-basic-39-0.14.noarch 22/141 Verifying : fedora-repos-39-0.1.noarch 23/141 Verifying : fedora-repos-rawhide-39-0.1.noarch 24/141 Verifying : file-libs-5.44-3.fc39.x86_64 25/141 Verifying : filesystem-3.18-4.fc39.x86_64 26/141 Verifying : findutils-1:4.9.0-4.fc39.x86_64 27/141 Verifying : fmt-9.1.0-2.fc38.x86_64 28/141 Verifying : gawk-5.2.2-1.fc39.x86_64 29/141 Verifying : gdbm-libs-1:1.23-3.fc38.x86_64 30/141 Verifying : glib2-2.76.3-1.fc39.x86_64 31/141 Verifying : glibc-2.37.9000-14.fc39.x86_64 32/141 Verifying : glibc-common-2.37.9000-14.fc39.x86_64 33/141 Verifying : glibc-minimal-langpack-2.37.9000-14.fc39.x86_64 34/141 Verifying : gmp-1:6.2.1-4.fc38.x86_64 35/141 Verifying : gnupg2-2.4.2-2.fc39.x86_64 36/141 Verifying : gnutls-3.8.0-6.fc39.x86_64 37/141 Verifying : gpgme-1.17.1-5.fc39.x86_64 38/141 Verifying : grep-3.11-1.fc39.x86_64 39/141 Verifying : ima-evm-utils-1.5-1.fc39.x86_64 40/141 Verifying : json-c-0.16-4.fc38.x86_64 41/141 Verifying : keyutils-libs-1.6.1-6.fc38.x86_64 42/141 Verifying : krb5-libs-1.21-1.fc39.x86_64 43/141 Verifying : libacl-2.3.1-7.fc39.x86_64 44/141 Verifying : libarchive-3.6.1-5.fc39.x86_64 45/141 Verifying : libassuan-2.5.6-1.fc39.x86_64 46/141 Verifying : libattr-2.5.1-7.fc39.x86_64 47/141 Verifying : libb2-0.98.1-8.fc38.x86_64 48/141 Verifying : libblkid-2.39-4.fc39.x86_64 49/141 Verifying : libbrotli-1.0.9-11.fc38.x86_64 50/141 Verifying : libcap-2.48-6.fc38.x86_64 51/141 Verifying : libcap-ng-0.8.3-5.fc38.x86_64 52/141 Verifying : libcom_err-1.47.0-1.fc39.x86_64 53/141 Verifying : libcomps-0.1.19-1.fc39.x86_64 54/141 Verifying : libcurl-8.1.2-1.fc39.x86_64 55/141 Verifying : libdnf-0.70.1-3.fc39.x86_64 56/141 Verifying : libdnf5-5.0.14-1.fc39.x86_64 57/141 Verifying : libeconf-0.4.0-5.fc38.x86_64 58/141 Verifying : libevent-2.1.12-8.fc38.x86_64 59/141 Verifying : libffi-3.4.4-2.fc38.x86_64 60/141 Verifying : libfsverity-1.4-9.fc38.x86_64 61/141 Verifying : libgcc-13.1.1-4.fc39.x86_64 62/141 Verifying : libgcrypt-1.10.2-1.fc39.x86_64 63/141 Verifying : libgomp-13.1.1-4.fc39.x86_64 64/141 Verifying : libgpg-error-1.47-1.fc39.x86_64 65/141 Verifying : libidn2-2.3.4-2.fc38.x86_64 66/141 Verifying : libksba-1.6.4-1.fc39.x86_64 67/141 Verifying : libmodulemd-2.15.0-3.fc39.x86_64 68/141 Verifying : libmount-2.39-4.fc39.x86_64 69/141 Verifying : libnghttp2-1.54.0-1.fc39.x86_64 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Verifying : libxml2-2.10.4-1.fc39.x86_64 91/141 Verifying : libyaml-0.2.5-9.fc38.x86_64 92/141 Verifying : libzstd-1.5.5-1.fc39.x86_64 93/141 Verifying : lua-libs-5.4.4-9.fc39.x86_64 94/141 Verifying : lz4-libs-1.9.4-3.fc39.x86_64 95/141 Verifying : mpdecimal-2.5.1-6.fc38.x86_64 96/141 Verifying : mpfr-4.1.1-3.fc38.x86_64 97/141 Verifying : ncurses-base-6.4-4.20230520.fc39.noarch 98/141 Verifying : ncurses-libs-6.4-4.20230520.fc39.x86_64 99/141 Verifying : nettle-3.9.1-1.fc39.x86_64 100/141 Verifying : npth-1.6-13.fc39.x86_64 101/141 Verifying : openldap-2.6.4-2.fc39.x86_64 102/141 Verifying : openssl-libs-1:3.0.8-2.fc39.x86_64 103/141 Verifying : p11-kit-0.24.1-6.fc38.x86_64 104/141 Verifying : p11-kit-trust-0.24.1-6.fc38.x86_64 105/141 Verifying : pcre2-10.42-1.fc38.1.x86_64 106/141 Verifying : pcre2-syntax-10.42-1.fc38.1.noarch 107/141 Verifying : popt-1.19-2.fc38.x86_64 108/141 Verifying : publicsuffix-list-dafsa-20230614-1.fc39.noarch 109/141 Verifying : python-pip-wheel-23.1.2-1.fc39.noarch 110/141 Verifying : python-setuptools-wheel-67.7.2-2.fc39.noarch 111/141 Verifying : python3-3.11.4-1.fc39.x86_64 112/141 Verifying : python3-dateutil-1:2.8.2-6.fc39.noarch 113/141 Verifying : python3-dbus-1.3.2-2.fc38.x86_64 114/141 Verifying : python3-distro-1.8.0-4.fc39.noarch 115/141 Verifying : python3-dnf-4.16.1-2.fc39.noarch 116/141 Verifying : python3-dnf-plugins-core-4.4.1-3.fc39.noarch 117/141 Verifying : python3-gpg-1.17.1-5.fc39.x86_64 118/141 Verifying : python3-hawkey-0.70.1-3.fc39.x86_64 119/141 Verifying : python3-libcomps-0.1.19-1.fc39.x86_64 120/141 Verifying : python3-libdnf-0.70.1-3.fc39.x86_64 121/141 Verifying : python3-libs-3.11.4-1.fc39.x86_64 122/141 Verifying : python3-rpm-4.18.91-1.fc39.x86_64 123/141 Verifying : python3-six-1.16.0-9.fc38.noarch 124/141 Verifying : python3-systemd-235-2.fc38.x86_64 125/141 Verifying : readline-8.2-3.fc38.x86_64 126/141 Verifying : rpm-4.18.91-1.fc39.x86_64 127/141 Verifying : rpm-build-libs-4.18.91-1.fc39.x86_64 128/141 Verifying : rpm-libs-4.18.91-1.fc39.x86_64 129/141 Verifying : rpm-sequoia-1.4.0-3.fc39.x86_64 130/141 Verifying : rpm-sign-libs-4.18.91-1.fc39.x86_64 131/141 Verifying : sed-4.8-12.fc38.x86_64 132/141 Verifying : setup-2.14.3-3.fc39.noarch 133/141 Verifying : shadow-utils-2:4.13-7.fc39.x86_64 134/141 Verifying : sqlite-libs-3.41.2-3.fc39.x86_64 135/141 Verifying : systemd-libs-253.5-6.fc39.x86_64 136/141 Verifying : tpm2-tss-4.0.1-3.fc38.x86_64 137/141 Verifying : tzdata-2023c-1.fc39.noarch 138/141 Verifying : xz-libs-5.4.3-1.fc39.x86_64 139/141 Verifying : zchunk-libs-1.3.1-1.fc39.x86_64 140/141 Verifying : zlib-1.2.13-3.fc38.x86_64 141/141 Installed products updated. Installed: alternatives-1.24-1.fc39.x86_64 audit-libs-3.1.1-1.fc39.x86_64 basesystem-11-17.fc39.noarch bash-5.2.15-3.fc38.x86_64 bzip2-libs-1.0.8-13.fc38.x86_64 ca-certificates-2023.2.60-2.fc38.noarch coreutils-9.3-1.fc39.x86_64 coreutils-common-9.3-1.fc39.x86_64 crypto-policies-20230614-1.git5f3458e.fc39.noarch curl-8.1.2-1.fc39.x86_64 cyrus-sasl-lib-2.1.28-10.fc39.x86_64 dbus-libs-1:1.14.8-1.fc39.x86_64 dnf-data-4.16.1-2.fc39.noarch dnf-plugins-core-4.4.1-3.fc39.noarch elfutils-default-yama-scope-0.189-2.fc39.noarch elfutils-libelf-0.189-2.fc39.x86_64 elfutils-libs-0.189-2.fc39.x86_64 expat-2.5.0-2.fc38.x86_64 fedora-gpg-keys-39-0.1.noarch fedora-release-39-0.14.noarch fedora-release-common-39-0.14.noarch fedora-release-identity-basic-39-0.14.noarch fedora-repos-39-0.1.noarch fedora-repos-rawhide-39-0.1.noarch file-libs-5.44-3.fc39.x86_64 filesystem-3.18-4.fc39.x86_64 findutils-1:4.9.0-4.fc39.x86_64 fmt-9.1.0-2.fc38.x86_64 gawk-5.2.2-1.fc39.x86_64 gdbm-libs-1:1.23-3.fc38.x86_64 glib2-2.76.3-1.fc39.x86_64 glibc-2.37.9000-14.fc39.x86_64 glibc-common-2.37.9000-14.fc39.x86_64 glibc-minimal-langpack-2.37.9000-14.fc39.x86_64 gmp-1:6.2.1-4.fc38.x86_64 gnupg2-2.4.2-2.fc39.x86_64 gnutls-3.8.0-6.fc39.x86_64 gpgme-1.17.1-5.fc39.x86_64 grep-3.11-1.fc39.x86_64 ima-evm-utils-1.5-1.fc39.x86_64 json-c-0.16-4.fc38.x86_64 keyutils-libs-1.6.1-6.fc38.x86_64 krb5-libs-1.21-1.fc39.x86_64 libacl-2.3.1-7.fc39.x86_64 libarchive-3.6.1-5.fc39.x86_64 libassuan-2.5.6-1.fc39.x86_64 libattr-2.5.1-7.fc39.x86_64 libb2-0.98.1-8.fc38.x86_64 libblkid-2.39-4.fc39.x86_64 libbrotli-1.0.9-11.fc38.x86_64 libcap-2.48-6.fc38.x86_64 libcap-ng-0.8.3-5.fc38.x86_64 libcom_err-1.47.0-1.fc39.x86_64 libcomps-0.1.19-1.fc39.x86_64 libcurl-8.1.2-1.fc39.x86_64 libdnf-0.70.1-3.fc39.x86_64 libdnf5-5.0.14-1.fc39.x86_64 libeconf-0.4.0-5.fc38.x86_64 libevent-2.1.12-8.fc38.x86_64 libffi-3.4.4-2.fc38.x86_64 libfsverity-1.4-9.fc38.x86_64 libgcc-13.1.1-4.fc39.x86_64 libgcrypt-1.10.2-1.fc39.x86_64 libgomp-13.1.1-4.fc39.x86_64 libgpg-error-1.47-1.fc39.x86_64 libidn2-2.3.4-2.fc38.x86_64 libksba-1.6.4-1.fc39.x86_64 libmodulemd-2.15.0-3.fc39.x86_64 libmount-2.39-4.fc39.x86_64 libnghttp2-1.54.0-1.fc39.x86_64 libnsl2-2.0.0-5.fc38.x86_64 libpsl-0.21.2-3.fc39.x86_64 librepo-1.15.1-2.fc38.x86_64 libreport-filesystem-2.17.10-1.fc39.noarch libselinux-3.5-1.fc39.x86_64 libsemanage-3.5-2.fc39.x86_64 libsepol-3.5-1.fc39.x86_64 libsigsegv-2.14-4.fc38.x86_64 libsmartcols-2.39-4.fc39.x86_64 libsolv-0.7.24-4.fc39.x86_64 libssh-0.10.5-1.fc39.x86_64 libssh-config-0.10.5-1.fc39.noarch libstdc++-13.1.1-4.fc39.x86_64 libtasn1-4.19.0-2.fc38.x86_64 libtirpc-1.3.3-1.rc1.fc39.x86_64 libunistring-1.1-3.fc38.x86_64 libunistring1.0-1.0-1.fc38.x86_64 libuuid-2.39-4.fc39.x86_64 libverto-0.3.2-5.fc38.x86_64 libxcrypt-4.4.35-1.fc39.x86_64 libxml2-2.10.4-1.fc39.x86_64 libyaml-0.2.5-9.fc38.x86_64 libzstd-1.5.5-1.fc39.x86_64 lua-libs-5.4.4-9.fc39.x86_64 lz4-libs-1.9.4-3.fc39.x86_64 mpdecimal-2.5.1-6.fc38.x86_64 mpfr-4.1.1-3.fc38.x86_64 ncurses-base-6.4-4.20230520.fc39.noarch ncurses-libs-6.4-4.20230520.fc39.x86_64 nettle-3.9.1-1.fc39.x86_64 npth-1.6-13.fc39.x86_64 openldap-2.6.4-2.fc39.x86_64 openssl-libs-1:3.0.8-2.fc39.x86_64 p11-kit-0.24.1-6.fc38.x86_64 p11-kit-trust-0.24.1-6.fc38.x86_64 pcre2-10.42-1.fc38.1.x86_64 pcre2-syntax-10.42-1.fc38.1.noarch popt-1.19-2.fc38.x86_64 publicsuffix-list-dafsa-20230614-1.fc39.noarch python-pip-wheel-23.1.2-1.fc39.noarch python-setuptools-wheel-67.7.2-2.fc39.noarch python3-3.11.4-1.fc39.x86_64 python3-dateutil-1:2.8.2-6.fc39.noarch python3-dbus-1.3.2-2.fc38.x86_64 python3-distro-1.8.0-4.fc39.noarch python3-dnf-4.16.1-2.fc39.noarch python3-dnf-plugins-core-4.4.1-3.fc39.noarch python3-gpg-1.17.1-5.fc39.x86_64 python3-hawkey-0.70.1-3.fc39.x86_64 python3-libcomps-0.1.19-1.fc39.x86_64 python3-libdnf-0.70.1-3.fc39.x86_64 python3-libs-3.11.4-1.fc39.x86_64 python3-rpm-4.18.91-1.fc39.x86_64 python3-six-1.16.0-9.fc38.noarch python3-systemd-235-2.fc38.x86_64 readline-8.2-3.fc38.x86_64 rpm-4.18.91-1.fc39.x86_64 rpm-build-libs-4.18.91-1.fc39.x86_64 rpm-libs-4.18.91-1.fc39.x86_64 rpm-sequoia-1.4.0-3.fc39.x86_64 rpm-sign-libs-4.18.91-1.fc39.x86_64 sed-4.8-12.fc38.x86_64 setup-2.14.3-3.fc39.noarch shadow-utils-2:4.13-7.fc39.x86_64 sqlite-libs-3.41.2-3.fc39.x86_64 systemd-libs-253.5-6.fc39.x86_64 tpm2-tss-4.0.1-3.fc38.x86_64 tzdata-2023c-1.fc39.noarch xz-libs-5.4.3-1.fc39.x86_64 zchunk-libs-1.3.1-1.fc39.x86_64 zlib-1.2.13-3.fc38.x86_64 Complete! Finish(bootstrap): installing dnf tooling Start(bootstrap): creating root cache Finish(bootstrap): creating root cache Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-1687862083.251117/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin Mock Version: 4.1 INFO: Mock Version: 4.1 INFO: Package manager dnf detected and used (direct choice) Start: installing minimal buildroot with dnf No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 143 kB/s | 14 kB 00:00 fedora 36 MB/s | 71 MB 00:01 Dependencies resolved. ================================================================================ Package Arch Version Repo Size ================================================================================ Installing group/module packages: bash x86_64 5.2.15-3.fc38 fedora 1.8 M bzip2 x86_64 1.0.8-13.fc38 fedora 52 k coreutils x86_64 9.3-1.fc39 fedora 1.1 M cpio x86_64 2.14-2.fc39 fedora 279 k diffutils x86_64 3.9-4.fc39 fedora 397 k fedora-release-common noarch 39-0.14 fedora 17 k findutils x86_64 1:4.9.0-4.fc39 fedora 491 k gawk x86_64 5.2.2-1.fc39 fedora 1.1 M glibc-minimal-langpack x86_64 2.37.9000-14.fc39 fedora 59 k grep x86_64 3.11-1.fc39 fedora 298 k gzip x86_64 1.12-3.fc38 fedora 166 k info x86_64 7.0.3-2.fc39 fedora 182 k patch x86_64 2.7.6-21.fc39 fedora 126 k redhat-rpm-config noarch 255-1.fc39 fedora 83 k rpm-build x86_64 4.18.91-1.fc39 fedora 77 k sed x86_64 4.8-12.fc38 fedora 306 k shadow-utils x86_64 2:4.13-7.fc39 fedora 1.3 M tar x86_64 2:1.34-8.fc39 fedora 888 k unzip x86_64 6.0-60.fc38 fedora 184 k util-linux x86_64 2.39-4.fc39 fedora 1.2 M which x86_64 2.21-39.fc39 fedora 42 k xz x86_64 5.4.3-1.fc39 fedora 555 k Installing dependencies: alternatives x86_64 1.24-1.fc39 fedora 39 k ansible-srpm-macros noarch 1-10.fc39 fedora 21 k audit-libs x86_64 3.1.1-1.fc39 fedora 117 k authselect x86_64 1.4.2-2.fc38 fedora 144 k authselect-libs x86_64 1.4.2-2.fc38 fedora 249 k basesystem noarch 11-17.fc39 fedora 7.0 k binutils x86_64 2.40-9.fc39 fedora 5.6 M binutils-gold x86_64 2.40-9.fc39 fedora 797 k bzip2-libs x86_64 1.0.8-13.fc38 fedora 41 k ca-certificates noarch 2023.2.60-2.fc38 fedora 845 k coreutils-common x86_64 9.3-1.fc39 fedora 2.1 M cracklib x86_64 2.9.7-31.fc38 fedora 92 k crypto-policies noarch 20230614-1.git5f3458e.fc39 fedora 94 k curl x86_64 8.1.2-1.fc39 fedora 345 k cyrus-sasl-lib x86_64 2.1.28-10.fc39 fedora 792 k debugedit x86_64 5.0-7.fc38 fedora 78 k dwz x86_64 0.15-2.fc38 fedora 135 k ed x86_64 1.19-2.fc38 fedora 78 k efi-srpm-macros noarch 5-8.fc39 fedora 22 k elfutils x86_64 0.189-2.fc39 fedora 536 k elfutils-debuginfod-client x86_64 0.189-2.fc39 fedora 39 k elfutils-default-yama-scope noarch 0.189-2.fc39 fedora 15 k elfutils-libelf x86_64 0.189-2.fc39 fedora 196 k elfutils-libs x86_64 0.189-2.fc39 fedora 260 k fedora-gpg-keys noarch 39-0.1 fedora 126 k fedora-release noarch 39-0.14 fedora 6.6 k fedora-release-identity-basic noarch 39-0.14 fedora 7.4 k fedora-repos noarch 39-0.1 fedora 9.4 k fedora-repos-rawhide noarch 39-0.1 fedora 9.0 k file x86_64 5.44-3.fc39 fedora 50 k file-libs x86_64 5.44-3.fc39 fedora 730 k filesystem x86_64 3.18-4.fc39 fedora 1.1 M fonts-srpm-macros noarch 1:2.0.5-11.fc38 fedora 26 k fpc-srpm-macros noarch 1.3-7.fc38 fedora 7.8 k gdb-minimal x86_64 13.1-5.fc39 fedora 4.2 M gdbm-libs x86_64 1:1.23-3.fc38 fedora 56 k ghc-srpm-macros noarch 1.6.1-1.fc38 fedora 8.0 k glibc x86_64 2.37.9000-14.fc39 fedora 2.2 M glibc-common x86_64 2.37.9000-14.fc39 fedora 339 k glibc-gconv-extra x86_64 2.37.9000-14.fc39 fedora 1.6 M gmp x86_64 1:6.2.1-4.fc38 fedora 313 k gnat-srpm-macros noarch 6-2.fc38 fedora 8.8 k go-srpm-macros noarch 3.2.0-3.fc39 fedora 27 k jansson x86_64 2.13.1-6.fc38 fedora 44 k kernel-srpm-macros noarch 1.0-19.fc39 fedora 10 k keyutils-libs x86_64 1.6.1-6.fc38 fedora 31 k krb5-libs x86_64 1.21-1.fc39 fedora 765 k libacl x86_64 2.3.1-7.fc39 fedora 23 k libarchive x86_64 3.6.1-5.fc39 fedora 400 k libattr x86_64 2.5.1-7.fc39 fedora 18 k libblkid x86_64 2.39-4.fc39 fedora 116 k libbrotli x86_64 1.0.9-11.fc38 fedora 317 k libcap x86_64 2.48-6.fc38 fedora 67 k libcap-ng x86_64 0.8.3-5.fc38 fedora 32 k libcom_err x86_64 1.47.0-1.fc39 fedora 26 k libcurl x86_64 8.1.2-1.fc39 fedora 323 k libdb x86_64 5.3.28-55.fc38 fedora 758 k libeconf x86_64 0.4.0-5.fc38 fedora 27 k libevent x86_64 2.1.12-8.fc38 fedora 257 k libfdisk x86_64 2.39-4.fc39 fedora 162 k libffi x86_64 3.4.4-2.fc38 fedora 38 k libgcc x86_64 13.1.1-4.fc39 fedora 107 k libgomp x86_64 13.1.1-4.fc39 fedora 317 k libidn2 x86_64 2.3.4-2.fc38 fedora 160 k libmount x86_64 2.39-4.fc39 fedora 155 k libnghttp2 x86_64 1.54.0-1.fc39 fedora 75 k libnsl2 x86_64 2.0.0-5.fc38 fedora 30 k libpkgconf x86_64 1.9.4-2.fc39 fedora 38 k libpsl x86_64 0.21.2-3.fc39 fedora 63 k libpwquality x86_64 1.4.5-3.fc38 fedora 119 k libselinux x86_64 3.5-1.fc39 fedora 87 k libsemanage x86_64 3.5-2.fc39 fedora 120 k libsepol x86_64 3.5-1.fc39 fedora 324 k libsigsegv x86_64 2.14-4.fc38 fedora 27 k libsmartcols x86_64 2.39-4.fc39 fedora 67 k libssh x86_64 0.10.5-1.fc39 fedora 211 k libssh-config noarch 0.10.5-1.fc39 fedora 9.0 k libstdc++ x86_64 13.1.1-4.fc39 fedora 861 k libtasn1 x86_64 4.19.0-2.fc38 fedora 74 k libtirpc x86_64 1.3.3-1.rc1.fc39 fedora 93 k libunistring x86_64 1.1-3.fc38 fedora 545 k libunistring1.0 x86_64 1.0-1.fc38 fedora 539 k libutempter x86_64 1.2.1-9.fc39 fedora 26 k libuuid x86_64 2.39-4.fc39 fedora 28 k libverto x86_64 0.3.2-5.fc38 fedora 21 k libxcrypt x86_64 4.4.35-1.fc39 fedora 119 k libxml2 x86_64 2.10.4-1.fc39 fedora 700 k libzstd x86_64 1.5.5-1.fc39 fedora 308 k lua-libs x86_64 5.4.4-9.fc39 fedora 133 k lua-srpm-macros noarch 1-8.fc38 fedora 8.6 k lz4-libs x86_64 1.9.4-3.fc39 fedora 67 k mpfr x86_64 4.1.1-3.fc38 fedora 600 k ncurses-base noarch 6.4-4.20230520.fc39 fedora 86 k ncurses-libs x86_64 6.4-4.20230520.fc39 fedora 336 k ocaml-srpm-macros noarch 7-3.fc38 fedora 13 k openblas-srpm-macros noarch 2-13.fc38 fedora 7.5 k openldap x86_64 2.6.4-2.fc39 fedora 255 k openssl-libs x86_64 1:3.0.8-2.fc39 fedora 2.1 M p11-kit x86_64 0.24.1-6.fc38 fedora 359 k p11-kit-trust x86_64 0.24.1-6.fc38 fedora 136 k package-notes-srpm-macros noarch 0.5-8.fc39 fedora 11 k pam x86_64 1.5.3-1.fc39 fedora 547 k pam-libs x86_64 1.5.3-1.fc39 fedora 57 k pcre2 x86_64 10.42-1.fc38.1 fedora 234 k pcre2-syntax noarch 10.42-1.fc38.1 fedora 144 k perl-srpm-macros noarch 1-48.fc38 fedora 8.4 k pkgconf x86_64 1.9.4-2.fc39 fedora 42 k pkgconf-m4 noarch 1.9.4-2.fc39 fedora 14 k pkgconf-pkg-config x86_64 1.9.4-2.fc39 fedora 9.5 k popt x86_64 1.19-2.fc38 fedora 67 k publicsuffix-list-dafsa noarch 20230614-1.fc39 fedora 57 k pyproject-srpm-macros noarch 1.9.0-1.fc39 fedora 15 k python-srpm-macros noarch 3.11-10.fc39 fedora 26 k qt5-srpm-macros noarch 5.15.10-1.fc39 fedora 7.8 k qt6-srpm-macros noarch 6.5.1-1.fc39 fedora 9.2 k readline x86_64 8.2-3.fc38 fedora 212 k rpm x86_64 4.18.91-1.fc39 fedora 528 k rpm-build-libs x86_64 4.18.91-1.fc39 fedora 95 k rpm-libs x86_64 4.18.91-1.fc39 fedora 308 k rpm-sequoia x86_64 1.4.0-3.fc39 fedora 848 k rpmautospec-rpm-macros noarch 0.3.5-2.fc39 fedora 8.9 k rust-srpm-macros noarch 24-2.fc39 fedora 12 k setup noarch 2.14.3-3.fc39 fedora 152 k sqlite-libs x86_64 3.41.2-3.fc39 fedora 669 k systemd-libs x86_64 253.5-6.fc39 fedora 652 k tzdata noarch 2023c-1.fc39 fedora 718 k util-linux-core x86_64 2.39-4.fc39 fedora 492 k xxhash-libs x86_64 0.8.1-5.fc39 fedora 40 k xz-libs x86_64 5.4.3-1.fc39 fedora 108 k zip x86_64 3.0-36.fc38 fedora 265 k zlib x86_64 1.2.13-3.fc38 fedora 95 k zstd x86_64 1.5.5-1.fc39 fedora 482 k Installing Groups: Buildsystem building group Transaction Summary ================================================================================ Install 154 Packages Total download size: 53 M Installed size: 181 M Downloading Packages: (1/154): ansible-srpm-macros-1-10.fc39.noarch.r 331 kB/s | 21 kB 00:00 (2/154): alternatives-1.24-1.fc39.x86_64.rpm 584 kB/s | 39 kB 00:00 (3/154): audit-libs-3.1.1-1.fc39.x86_64.rpm 1.2 MB/s | 117 kB 00:00 (4/154): basesystem-11-17.fc39.noarch.rpm 408 kB/s | 7.0 kB 00:00 (5/154): authselect-1.4.2-2.fc38.x86_64.rpm 2.6 MB/s | 144 kB 00:00 (6/154): authselect-libs-1.4.2-2.fc38.x86_64.rp 4.5 MB/s | 249 kB 00:00 (7/154): binutils-gold-2.40-9.fc39.x86_64.rpm 18 MB/s | 797 kB 00:00 (8/154): bzip2-1.0.8-13.fc38.x86_64.rpm 2.9 MB/s | 52 kB 00:00 (9/154): bash-5.2.15-3.fc38.x86_64.rpm 20 MB/s | 1.8 MB 00:00 (10/154): bzip2-libs-1.0.8-13.fc38.x86_64.rpm 2.0 MB/s | 41 kB 00:00 (11/154): binutils-2.40-9.fc39.x86_64.rpm 39 MB/s | 5.6 MB 00:00 (12/154): coreutils-9.3-1.fc39.x86_64.rpm 17 MB/s | 1.1 MB 00:00 (13/154): cpio-2.14-2.fc39.x86_64.rpm 12 MB/s | 279 kB 00:00 (14/154): coreutils-common-9.3-1.fc39.x86_64.rp 51 MB/s | 2.1 MB 00:00 (15/154): cracklib-2.9.7-31.fc38.x86_64.rpm 5.0 MB/s | 92 kB 00:00 (16/154): crypto-policies-20230614-1.git5f3458e 4.9 MB/s | 94 kB 00:00 (17/154): curl-8.1.2-1.fc39.x86_64.rpm 14 MB/s | 345 kB 00:00 (18/154): cyrus-sasl-lib-2.1.28-10.fc39.x86_64. 30 MB/s | 792 kB 00:00 (19/154): debugedit-5.0-7.fc38.x86_64.rpm 4.2 MB/s | 78 kB 00:00 (20/154): diffutils-3.9-4.fc39.x86_64.rpm 18 MB/s | 397 kB 00:00 (21/154): dwz-0.15-2.fc38.x86_64.rpm 6.9 MB/s | 135 kB 00:00 (22/154): ed-1.19-2.fc38.x86_64.rpm 4.2 MB/s | 78 kB 00:00 (23/154): efi-srpm-macros-5-8.fc39.noarch.rpm 1.2 MB/s | 22 kB 00:00 (24/154): elfutils-debuginfod-client-0.189-2.fc 2.1 MB/s | 39 kB 00:00 (25/154): elfutils-0.189-2.fc39.x86_64.rpm 23 MB/s | 536 kB 00:00 (26/154): elfutils-default-yama-scope-0.189-2.f 858 kB/s | 15 kB 00:00 (27/154): elfutils-libelf-0.189-2.fc39.x86_64.r 9.5 MB/s | 196 kB 00:00 (28/154): ca-certificates-2023.2.60-2.fc38.noar 3.6 MB/s | 845 kB 00:00 (29/154): elfutils-libs-0.189-2.fc39.x86_64.rpm 12 MB/s | 260 kB 00:00 (30/154): fedora-gpg-keys-39-0.1.noarch.rpm 6.5 MB/s | 126 kB 00:00 (31/154): fedora-release-39-0.14.noarch.rpm 369 kB/s | 6.6 kB 00:00 (32/154): fedora-release-common-39-0.14.noarch. 958 kB/s | 17 kB 00:00 (33/154): fedora-release-identity-basic-39-0.14 427 kB/s | 7.4 kB 00:00 (34/154): fedora-repos-39-0.1.noarch.rpm 532 kB/s | 9.4 kB 00:00 (35/154): fedora-repos-rawhide-39-0.1.noarch.rp 524 kB/s | 9.0 kB 00:00 (36/154): file-5.44-3.fc39.x86_64.rpm 2.7 MB/s | 50 kB 00:00 (37/154): file-libs-5.44-3.fc39.x86_64.rpm 26 MB/s | 730 kB 00:00 (38/154): findutils-4.9.0-4.fc39.x86_64.rpm 20 MB/s | 491 kB 00:00 (39/154): fonts-srpm-macros-2.0.5-11.fc38.noarc 1.5 MB/s | 26 kB 00:00 (40/154): filesystem-3.18-4.fc39.x86_64.rpm 26 MB/s | 1.1 MB 00:00 (41/154): fpc-srpm-macros-1.3-7.fc38.noarch.rpm 446 kB/s | 7.8 kB 00:00 (42/154): gdbm-libs-1.23-3.fc38.x86_64.rpm 3.0 MB/s | 56 kB 00:00 (43/154): gawk-5.2.2-1.fc39.x86_64.rpm 28 MB/s | 1.1 MB 00:00 (44/154): ghc-srpm-macros-1.6.1-1.fc38.noarch.r 460 kB/s | 8.0 kB 00:00 (45/154): glibc-common-2.37.9000-14.fc39.x86_64 14 MB/s | 339 kB 00:00 (46/154): glibc-2.37.9000-14.fc39.x86_64.rpm 35 MB/s | 2.2 MB 00:00 (47/154): glibc-minimal-langpack-2.37.9000-14.f 3.2 MB/s | 59 kB 00:00 (48/154): gdb-minimal-13.1-5.fc39.x86_64.rpm 33 MB/s | 4.2 MB 00:00 (49/154): gmp-6.2.1-4.fc38.x86_64.rpm 14 MB/s | 313 kB 00:00 (50/154): glibc-gconv-extra-2.37.9000-14.fc39.x 23 MB/s | 1.6 MB 00:00 (51/154): gnat-srpm-macros-6-2.fc38.noarch.rpm 513 kB/s | 8.8 kB 00:00 (52/154): go-srpm-macros-3.2.0-3.fc39.noarch.rp 1.5 MB/s | 27 kB 00:00 (53/154): grep-3.11-1.fc39.x86_64.rpm 13 MB/s | 298 kB 00:00 (54/154): gzip-1.12-3.fc38.x86_64.rpm 7.1 MB/s | 166 kB 00:00 (55/154): info-7.0.3-2.fc39.x86_64.rpm 8.9 MB/s | 182 kB 00:00 (56/154): jansson-2.13.1-6.fc38.x86_64.rpm 2.4 MB/s | 44 kB 00:00 (57/154): kernel-srpm-macros-1.0-19.fc39.noarch 586 kB/s | 10 kB 00:00 (58/154): keyutils-libs-1.6.1-6.fc38.x86_64.rpm 1.7 MB/s | 31 kB 00:00 (59/154): krb5-libs-1.21-1.fc39.x86_64.rpm 29 MB/s | 765 kB 00:00 (60/154): libacl-2.3.1-7.fc39.x86_64.rpm 1.3 MB/s | 23 kB 00:00 (61/154): libarchive-3.6.1-5.fc39.x86_64.rpm 17 MB/s | 400 kB 00:00 (62/154): libattr-2.5.1-7.fc39.x86_64.rpm 1.0 MB/s | 18 kB 00:00 (63/154): libblkid-2.39-4.fc39.x86_64.rpm 6.1 MB/s | 116 kB 00:00 (64/154): libbrotli-1.0.9-11.fc38.x86_64.rpm 14 MB/s | 317 kB 00:00 (65/154): libcap-2.48-6.fc38.x86_64.rpm 3.4 MB/s | 67 kB 00:00 (66/154): libcap-ng-0.8.3-5.fc38.x86_64.rpm 1.8 MB/s | 32 kB 00:00 (67/154): libcom_err-1.47.0-1.fc39.x86_64.rpm 1.4 MB/s | 26 kB 00:00 (68/154): libdb-5.3.28-55.fc38.x86_64.rpm 27 MB/s | 758 kB 00:00 (69/154): libeconf-0.4.0-5.fc38.x86_64.rpm 1.4 MB/s | 27 kB 00:00 (70/154): libcurl-8.1.2-1.fc39.x86_64.rpm 11 MB/s | 323 kB 00:00 (71/154): libfdisk-2.39-4.fc39.x86_64.rpm 7.6 MB/s | 162 kB 00:00 (72/154): libevent-2.1.12-8.fc38.x86_64.rpm 11 MB/s | 257 kB 00:00 (73/154): libffi-3.4.4-2.fc38.x86_64.rpm 1.8 MB/s | 38 kB 00:00 (74/154): libidn2-2.3.4-2.fc38.x86_64.rpm 7.4 MB/s | 160 kB 00:00 (75/154): libgcc-13.1.1-4.fc39.x86_64.rpm 4.6 MB/s | 107 kB 00:00 (76/154): libgomp-13.1.1-4.fc39.x86_64.rpm 14 MB/s | 317 kB 00:00 (77/154): libnghttp2-1.54.0-1.fc39.x86_64.rpm 4.0 MB/s | 75 kB 00:00 (78/154): libnsl2-2.0.0-5.fc38.x86_64.rpm 1.6 MB/s | 30 kB 00:00 (79/154): libmount-2.39-4.fc39.x86_64.rpm 6.7 MB/s | 155 kB 00:00 (80/154): libpkgconf-1.9.4-2.fc39.x86_64.rpm 2.1 MB/s | 38 kB 00:00 (81/154): libpsl-0.21.2-3.fc39.x86_64.rpm 3.4 MB/s | 63 kB 00:00 (82/154): libpwquality-1.4.5-3.fc38.x86_64.rpm 5.6 MB/s | 119 kB 00:00 (83/154): libselinux-3.5-1.fc39.x86_64.rpm 4.6 MB/s | 87 kB 00:00 (84/154): libsemanage-3.5-2.fc39.x86_64.rpm 6.2 MB/s | 120 kB 00:00 (85/154): libsepol-3.5-1.fc39.x86_64.rpm 11 MB/s | 324 kB 00:00 (86/154): libsigsegv-2.14-4.fc38.x86_64.rpm 1.5 MB/s | 27 kB 00:00 (87/154): libsmartcols-2.39-4.fc39.x86_64.rpm 3.6 MB/s | 67 kB 00:00 (88/154): libssh-config-0.10.5-1.fc39.noarch.rp 518 kB/s | 9.0 kB 00:00 (89/154): libssh-0.10.5-1.fc39.x86_64.rpm 8.7 MB/s | 211 kB 00:00 (90/154): libstdc++-13.1.1-4.fc39.x86_64.rpm 28 MB/s | 861 kB 00:00 (91/154): libtasn1-4.19.0-2.fc38.x86_64.rpm 4.0 MB/s | 74 kB 00:00 (92/154): libtirpc-1.3.3-1.rc1.fc39.x86_64.rpm 4.6 MB/s | 93 kB 00:00 (93/154): libunistring-1.1-3.fc38.x86_64.rpm 19 MB/s | 545 kB 00:00 (94/154): libunistring1.0-1.0-1.fc38.x86_64.rpm 21 MB/s | 539 kB 00:00 (95/154): libutempter-1.2.1-9.fc39.x86_64.rpm 1.4 MB/s | 26 kB 00:00 (96/154): libuuid-2.39-4.fc39.x86_64.rpm 1.5 MB/s | 28 kB 00:00 (97/154): libverto-0.3.2-5.fc38.x86_64.rpm 1.2 MB/s | 21 kB 00:00 (98/154): libxcrypt-4.4.35-1.fc39.x86_64.rpm 6.2 MB/s | 119 kB 00:00 (99/154): lua-libs-5.4.4-9.fc39.x86_64.rpm 6.6 MB/s | 133 kB 00:00 (100/154): libxml2-2.10.4-1.fc39.x86_64.rpm 25 MB/s | 700 kB 00:00 (101/154): libzstd-1.5.5-1.fc39.x86_64.rpm 11 MB/s | 308 kB 00:00 (102/154): lua-srpm-macros-1-8.fc38.noarch.rpm 481 kB/s | 8.6 kB 00:00 (103/154): lz4-libs-1.9.4-3.fc39.x86_64.rpm 3.5 MB/s | 67 kB 00:00 (104/154): ncurses-base-6.4-4.20230520.fc39.noa 4.5 MB/s | 86 kB 00:00 (105/154): ncurses-libs-6.4-4.20230520.fc39.x86 15 MB/s | 336 kB 00:00 (106/154): mpfr-4.1.1-3.fc38.x86_64.rpm 14 MB/s | 600 kB 00:00 (107/154): ocaml-srpm-macros-7-3.fc38.noarch.rp 766 kB/s | 13 kB 00:00 (108/154): openblas-srpm-macros-2-13.fc38.noarc 432 kB/s | 7.5 kB 00:00 (109/154): openldap-2.6.4-2.fc39.x86_64.rpm 9.3 MB/s | 255 kB 00:00 (110/154): p11-kit-0.24.1-6.fc38.x86_64.rpm 15 MB/s | 359 kB 00:00 (111/154): p11-kit-trust-0.24.1-6.fc38.x86_64.r 6.2 MB/s | 136 kB 00:00 (112/154): openssl-libs-3.0.8-2.fc39.x86_64.rpm 44 MB/s | 2.1 MB 00:00 (113/154): package-notes-srpm-macros-0.5-8.fc39 633 kB/s | 11 kB 00:00 (114/154): pam-libs-1.5.3-1.fc39.x86_64.rpm 3.1 MB/s | 57 kB 00:00 (115/154): patch-2.7.6-21.fc39.x86_64.rpm 6.5 MB/s | 126 kB 00:00 (116/154): pam-1.5.3-1.fc39.x86_64.rpm 14 MB/s | 547 kB 00:00 (117/154): pcre2-10.42-1.fc38.1.x86_64.rpm 12 MB/s | 234 kB 00:00 (118/154): pcre2-syntax-10.42-1.fc38.1.noarch.r 7.4 MB/s | 144 kB 00:00 (119/154): perl-srpm-macros-1-48.fc38.noarch.rp 488 kB/s | 8.4 kB 00:00 (120/154): pkgconf-1.9.4-2.fc39.x86_64.rpm 2.3 MB/s | 42 kB 00:00 (121/154): 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00:00 (150/154): xz-libs-5.4.3-1.fc39.x86_64.rpm 5.6 MB/s | 108 kB 00:00 (151/154): zip-3.0-36.fc38.x86_64.rpm 12 MB/s | 265 kB 00:00 (152/154): xz-5.4.3-1.fc39.x86_64.rpm 14 MB/s | 555 kB 00:00 (153/154): zlib-1.2.13-3.fc38.x86_64.rpm 5.0 MB/s | 95 kB 00:00 (154/154): zstd-1.5.5-1.fc39.x86_64.rpm 20 MB/s | 482 kB 00:00 -------------------------------------------------------------------------------- Total 35 MB/s | 53 MB 00:01 fedora 1.6 MB/s | 1.6 kB 00:00 Importing GPG key 0x18B8E74C: Userid : "Fedora (39) " Fingerprint: E8F2 3996 F232 1864 0CB4 4CBE 75CF 5AC4 18B8 E74C From : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-39-primary Key imported successfully fedora 1.6 MB/s | 1.6 kB 00:00 GPG key at file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-39-primary (0x18B8E74C) is already installed fedora 1.6 MB/s | 1.6 kB 00:00 Importing GPG key 0xEB10B464: Userid : "Fedora (38) " Fingerprint: 6A51 BBAB BA3D 5467 B617 1221 809A 8D7C EB10 B464 From : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-38-primary Key imported successfully Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Running scriptlet: filesystem-3.18-4.fc39.x86_64 1/1 Preparing : 1/1 Installing : libgcc-13.1.1-4.fc39.x86_64 1/154 Running scriptlet: libgcc-13.1.1-4.fc39.x86_64 1/154 Installing : crypto-policies-20230614-1.git5f3458e.fc39.noarc 2/154 Running scriptlet: crypto-policies-20230614-1.git5f3458e.fc39.noarc 2/154 Installing : tzdata-2023c-1.fc39.noarch 3/154 Installing : fedora-release-identity-basic-39-0.14.noarch 4/154 Installing : rust-srpm-macros-24-2.fc39.noarch 5/154 Installing : qt6-srpm-macros-6.5.1-1.fc39.noarch 6/154 Installing : qt5-srpm-macros-5.15.10-1.fc39.noarch 7/154 Installing : pyproject-srpm-macros-1.9.0-1.fc39.noarch 8/154 Installing : publicsuffix-list-dafsa-20230614-1.fc39.noarch 9/154 Installing : pkgconf-m4-1.9.4-2.fc39.noarch 10/154 Installing : perl-srpm-macros-1-48.fc38.noarch 11/154 Installing : pcre2-syntax-10.42-1.fc38.1.noarch 12/154 Installing : package-notes-srpm-macros-0.5-8.fc39.noarch 13/154 Installing : 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util-linux-2.39-4.fc39.x86_64 152/154 Installing : which-2.21-39.fc39.x86_64 153/154 Installing : info-7.0.3-2.fc39.x86_64 154/154 Running scriptlet: filesystem-3.18-4.fc39.x86_64 154/154 Running scriptlet: ca-certificates-2023.2.60-2.fc38.noarch 154/154 Running scriptlet: authselect-libs-1.4.2-2.fc38.x86_64 154/154 Running scriptlet: rpm-4.18.91-1.fc39.x86_64 154/154 Running scriptlet: info-7.0.3-2.fc39.x86_64 154/154 Verifying : alternatives-1.24-1.fc39.x86_64 1/154 Verifying : ansible-srpm-macros-1-10.fc39.noarch 2/154 Verifying : audit-libs-3.1.1-1.fc39.x86_64 3/154 Verifying : authselect-1.4.2-2.fc38.x86_64 4/154 Verifying : authselect-libs-1.4.2-2.fc38.x86_64 5/154 Verifying : basesystem-11-17.fc39.noarch 6/154 Verifying : bash-5.2.15-3.fc38.x86_64 7/154 Verifying : binutils-2.40-9.fc39.x86_64 8/154 Verifying : binutils-gold-2.40-9.fc39.x86_64 9/154 Verifying : bzip2-1.0.8-13.fc38.x86_64 10/154 Verifying : bzip2-libs-1.0.8-13.fc38.x86_64 11/154 Verifying : ca-certificates-2023.2.60-2.fc38.noarch 12/154 Verifying : coreutils-9.3-1.fc39.x86_64 13/154 Verifying : coreutils-common-9.3-1.fc39.x86_64 14/154 Verifying : cpio-2.14-2.fc39.x86_64 15/154 Verifying : cracklib-2.9.7-31.fc38.x86_64 16/154 Verifying : crypto-policies-20230614-1.git5f3458e.fc39.noarc 17/154 Verifying : curl-8.1.2-1.fc39.x86_64 18/154 Verifying : cyrus-sasl-lib-2.1.28-10.fc39.x86_64 19/154 Verifying : debugedit-5.0-7.fc38.x86_64 20/154 Verifying : diffutils-3.9-4.fc39.x86_64 21/154 Verifying : dwz-0.15-2.fc38.x86_64 22/154 Verifying : ed-1.19-2.fc38.x86_64 23/154 Verifying : efi-srpm-macros-5-8.fc39.noarch 24/154 Verifying : elfutils-0.189-2.fc39.x86_64 25/154 Verifying : elfutils-debuginfod-client-0.189-2.fc39.x86_64 26/154 Verifying : elfutils-default-yama-scope-0.189-2.fc39.noarch 27/154 Verifying : elfutils-libelf-0.189-2.fc39.x86_64 28/154 Verifying : elfutils-libs-0.189-2.fc39.x86_64 29/154 Verifying : fedora-gpg-keys-39-0.1.noarch 30/154 Verifying : fedora-release-39-0.14.noarch 31/154 Verifying : fedora-release-common-39-0.14.noarch 32/154 Verifying : fedora-release-identity-basic-39-0.14.noarch 33/154 Verifying : fedora-repos-39-0.1.noarch 34/154 Verifying : fedora-repos-rawhide-39-0.1.noarch 35/154 Verifying : file-5.44-3.fc39.x86_64 36/154 Verifying : file-libs-5.44-3.fc39.x86_64 37/154 Verifying : filesystem-3.18-4.fc39.x86_64 38/154 Verifying : findutils-1:4.9.0-4.fc39.x86_64 39/154 Verifying : fonts-srpm-macros-1:2.0.5-11.fc38.noarch 40/154 Verifying : fpc-srpm-macros-1.3-7.fc38.noarch 41/154 Verifying : gawk-5.2.2-1.fc39.x86_64 42/154 Verifying : gdb-minimal-13.1-5.fc39.x86_64 43/154 Verifying : gdbm-libs-1:1.23-3.fc38.x86_64 44/154 Verifying : ghc-srpm-macros-1.6.1-1.fc38.noarch 45/154 Verifying : glibc-2.37.9000-14.fc39.x86_64 46/154 Verifying : glibc-common-2.37.9000-14.fc39.x86_64 47/154 Verifying : glibc-gconv-extra-2.37.9000-14.fc39.x86_64 48/154 Verifying : glibc-minimal-langpack-2.37.9000-14.fc39.x86_64 49/154 Verifying : gmp-1:6.2.1-4.fc38.x86_64 50/154 Verifying : gnat-srpm-macros-6-2.fc38.noarch 51/154 Verifying : go-srpm-macros-3.2.0-3.fc39.noarch 52/154 Verifying : grep-3.11-1.fc39.x86_64 53/154 Verifying : gzip-1.12-3.fc38.x86_64 54/154 Verifying : info-7.0.3-2.fc39.x86_64 55/154 Verifying : jansson-2.13.1-6.fc38.x86_64 56/154 Verifying : kernel-srpm-macros-1.0-19.fc39.noarch 57/154 Verifying : keyutils-libs-1.6.1-6.fc38.x86_64 58/154 Verifying : krb5-libs-1.21-1.fc39.x86_64 59/154 Verifying : libacl-2.3.1-7.fc39.x86_64 60/154 Verifying : libarchive-3.6.1-5.fc39.x86_64 61/154 Verifying : libattr-2.5.1-7.fc39.x86_64 62/154 Verifying : libblkid-2.39-4.fc39.x86_64 63/154 Verifying : libbrotli-1.0.9-11.fc38.x86_64 64/154 Verifying : libcap-2.48-6.fc38.x86_64 65/154 Verifying : libcap-ng-0.8.3-5.fc38.x86_64 66/154 Verifying : libcom_err-1.47.0-1.fc39.x86_64 67/154 Verifying : libcurl-8.1.2-1.fc39.x86_64 68/154 Verifying : libdb-5.3.28-55.fc38.x86_64 69/154 Verifying : libeconf-0.4.0-5.fc38.x86_64 70/154 Verifying : libevent-2.1.12-8.fc38.x86_64 71/154 Verifying : libfdisk-2.39-4.fc39.x86_64 72/154 Verifying : libffi-3.4.4-2.fc38.x86_64 73/154 Verifying : libgcc-13.1.1-4.fc39.x86_64 74/154 Verifying : libgomp-13.1.1-4.fc39.x86_64 75/154 Verifying : libidn2-2.3.4-2.fc38.x86_64 76/154 Verifying : libmount-2.39-4.fc39.x86_64 77/154 Verifying : libnghttp2-1.54.0-1.fc39.x86_64 78/154 Verifying : libnsl2-2.0.0-5.fc38.x86_64 79/154 Verifying : libpkgconf-1.9.4-2.fc39.x86_64 80/154 Verifying : libpsl-0.21.2-3.fc39.x86_64 81/154 Verifying : libpwquality-1.4.5-3.fc38.x86_64 82/154 Verifying : libselinux-3.5-1.fc39.x86_64 83/154 Verifying : libsemanage-3.5-2.fc39.x86_64 84/154 Verifying : libsepol-3.5-1.fc39.x86_64 85/154 Verifying : libsigsegv-2.14-4.fc38.x86_64 86/154 Verifying : libsmartcols-2.39-4.fc39.x86_64 87/154 Verifying : libssh-0.10.5-1.fc39.x86_64 88/154 Verifying : libssh-config-0.10.5-1.fc39.noarch 89/154 Verifying : libstdc++-13.1.1-4.fc39.x86_64 90/154 Verifying : libtasn1-4.19.0-2.fc38.x86_64 91/154 Verifying : libtirpc-1.3.3-1.rc1.fc39.x86_64 92/154 Verifying : libunistring-1.1-3.fc38.x86_64 93/154 Verifying : libunistring1.0-1.0-1.fc38.x86_64 94/154 Verifying : libutempter-1.2.1-9.fc39.x86_64 95/154 Verifying : libuuid-2.39-4.fc39.x86_64 96/154 Verifying : libverto-0.3.2-5.fc38.x86_64 97/154 Verifying : libxcrypt-4.4.35-1.fc39.x86_64 98/154 Verifying : libxml2-2.10.4-1.fc39.x86_64 99/154 Verifying : libzstd-1.5.5-1.fc39.x86_64 100/154 Verifying : lua-libs-5.4.4-9.fc39.x86_64 101/154 Verifying : lua-srpm-macros-1-8.fc38.noarch 102/154 Verifying : lz4-libs-1.9.4-3.fc39.x86_64 103/154 Verifying : mpfr-4.1.1-3.fc38.x86_64 104/154 Verifying : ncurses-base-6.4-4.20230520.fc39.noarch 105/154 Verifying : ncurses-libs-6.4-4.20230520.fc39.x86_64 106/154 Verifying : ocaml-srpm-macros-7-3.fc38.noarch 107/154 Verifying : openblas-srpm-macros-2-13.fc38.noarch 108/154 Verifying : openldap-2.6.4-2.fc39.x86_64 109/154 Verifying : openssl-libs-1:3.0.8-2.fc39.x86_64 110/154 Verifying : p11-kit-0.24.1-6.fc38.x86_64 111/154 Verifying : p11-kit-trust-0.24.1-6.fc38.x86_64 112/154 Verifying : package-notes-srpm-macros-0.5-8.fc39.noarch 113/154 Verifying : pam-1.5.3-1.fc39.x86_64 114/154 Verifying : pam-libs-1.5.3-1.fc39.x86_64 115/154 Verifying : patch-2.7.6-21.fc39.x86_64 116/154 Verifying : pcre2-10.42-1.fc38.1.x86_64 117/154 Verifying : pcre2-syntax-10.42-1.fc38.1.noarch 118/154 Verifying : perl-srpm-macros-1-48.fc38.noarch 119/154 Verifying : pkgconf-1.9.4-2.fc39.x86_64 120/154 Verifying : pkgconf-m4-1.9.4-2.fc39.noarch 121/154 Verifying : pkgconf-pkg-config-1.9.4-2.fc39.x86_64 122/154 Verifying : popt-1.19-2.fc38.x86_64 123/154 Verifying : publicsuffix-list-dafsa-20230614-1.fc39.noarch 124/154 Verifying : pyproject-srpm-macros-1.9.0-1.fc39.noarch 125/154 Verifying : python-srpm-macros-3.11-10.fc39.noarch 126/154 Verifying : qt5-srpm-macros-5.15.10-1.fc39.noarch 127/154 Verifying : qt6-srpm-macros-6.5.1-1.fc39.noarch 128/154 Verifying : readline-8.2-3.fc38.x86_64 129/154 Verifying : redhat-rpm-config-255-1.fc39.noarch 130/154 Verifying : rpm-4.18.91-1.fc39.x86_64 131/154 Verifying : rpm-build-4.18.91-1.fc39.x86_64 132/154 Verifying : rpm-build-libs-4.18.91-1.fc39.x86_64 133/154 Verifying : rpm-libs-4.18.91-1.fc39.x86_64 134/154 Verifying : rpm-sequoia-1.4.0-3.fc39.x86_64 135/154 Verifying : rpmautospec-rpm-macros-0.3.5-2.fc39.noarch 136/154 Verifying : rust-srpm-macros-24-2.fc39.noarch 137/154 Verifying : sed-4.8-12.fc38.x86_64 138/154 Verifying : setup-2.14.3-3.fc39.noarch 139/154 Verifying : shadow-utils-2:4.13-7.fc39.x86_64 140/154 Verifying : sqlite-libs-3.41.2-3.fc39.x86_64 141/154 Verifying : systemd-libs-253.5-6.fc39.x86_64 142/154 Verifying : tar-2:1.34-8.fc39.x86_64 143/154 Verifying : tzdata-2023c-1.fc39.noarch 144/154 Verifying : unzip-6.0-60.fc38.x86_64 145/154 Verifying : util-linux-2.39-4.fc39.x86_64 146/154 Verifying : util-linux-core-2.39-4.fc39.x86_64 147/154 Verifying : which-2.21-39.fc39.x86_64 148/154 Verifying : xxhash-libs-0.8.1-5.fc39.x86_64 149/154 Verifying : xz-5.4.3-1.fc39.x86_64 150/154 Verifying : xz-libs-5.4.3-1.fc39.x86_64 151/154 Verifying : zip-3.0-36.fc38.x86_64 152/154 Verifying : zlib-1.2.13-3.fc38.x86_64 153/154 Verifying : zstd-1.5.5-1.fc39.x86_64 154/154 Installed: alternatives-1.24-1.fc39.x86_64 ansible-srpm-macros-1-10.fc39.noarch audit-libs-3.1.1-1.fc39.x86_64 authselect-1.4.2-2.fc38.x86_64 authselect-libs-1.4.2-2.fc38.x86_64 basesystem-11-17.fc39.noarch bash-5.2.15-3.fc38.x86_64 binutils-2.40-9.fc39.x86_64 binutils-gold-2.40-9.fc39.x86_64 bzip2-1.0.8-13.fc38.x86_64 bzip2-libs-1.0.8-13.fc38.x86_64 ca-certificates-2023.2.60-2.fc38.noarch coreutils-9.3-1.fc39.x86_64 coreutils-common-9.3-1.fc39.x86_64 cpio-2.14-2.fc39.x86_64 cracklib-2.9.7-31.fc38.x86_64 crypto-policies-20230614-1.git5f3458e.fc39.noarch curl-8.1.2-1.fc39.x86_64 cyrus-sasl-lib-2.1.28-10.fc39.x86_64 debugedit-5.0-7.fc38.x86_64 diffutils-3.9-4.fc39.x86_64 dwz-0.15-2.fc38.x86_64 ed-1.19-2.fc38.x86_64 efi-srpm-macros-5-8.fc39.noarch elfutils-0.189-2.fc39.x86_64 elfutils-debuginfod-client-0.189-2.fc39.x86_64 elfutils-default-yama-scope-0.189-2.fc39.noarch elfutils-libelf-0.189-2.fc39.x86_64 elfutils-libs-0.189-2.fc39.x86_64 fedora-gpg-keys-39-0.1.noarch fedora-release-39-0.14.noarch fedora-release-common-39-0.14.noarch fedora-release-identity-basic-39-0.14.noarch fedora-repos-39-0.1.noarch fedora-repos-rawhide-39-0.1.noarch file-5.44-3.fc39.x86_64 file-libs-5.44-3.fc39.x86_64 filesystem-3.18-4.fc39.x86_64 findutils-1:4.9.0-4.fc39.x86_64 fonts-srpm-macros-1:2.0.5-11.fc38.noarch fpc-srpm-macros-1.3-7.fc38.noarch gawk-5.2.2-1.fc39.x86_64 gdb-minimal-13.1-5.fc39.x86_64 gdbm-libs-1:1.23-3.fc38.x86_64 ghc-srpm-macros-1.6.1-1.fc38.noarch glibc-2.37.9000-14.fc39.x86_64 glibc-common-2.37.9000-14.fc39.x86_64 glibc-gconv-extra-2.37.9000-14.fc39.x86_64 glibc-minimal-langpack-2.37.9000-14.fc39.x86_64 gmp-1:6.2.1-4.fc38.x86_64 gnat-srpm-macros-6-2.fc38.noarch go-srpm-macros-3.2.0-3.fc39.noarch grep-3.11-1.fc39.x86_64 gzip-1.12-3.fc38.x86_64 info-7.0.3-2.fc39.x86_64 jansson-2.13.1-6.fc38.x86_64 kernel-srpm-macros-1.0-19.fc39.noarch keyutils-libs-1.6.1-6.fc38.x86_64 krb5-libs-1.21-1.fc39.x86_64 libacl-2.3.1-7.fc39.x86_64 libarchive-3.6.1-5.fc39.x86_64 libattr-2.5.1-7.fc39.x86_64 libblkid-2.39-4.fc39.x86_64 libbrotli-1.0.9-11.fc38.x86_64 libcap-2.48-6.fc38.x86_64 libcap-ng-0.8.3-5.fc38.x86_64 libcom_err-1.47.0-1.fc39.x86_64 libcurl-8.1.2-1.fc39.x86_64 libdb-5.3.28-55.fc38.x86_64 libeconf-0.4.0-5.fc38.x86_64 libevent-2.1.12-8.fc38.x86_64 libfdisk-2.39-4.fc39.x86_64 libffi-3.4.4-2.fc38.x86_64 libgcc-13.1.1-4.fc39.x86_64 libgomp-13.1.1-4.fc39.x86_64 libidn2-2.3.4-2.fc38.x86_64 libmount-2.39-4.fc39.x86_64 libnghttp2-1.54.0-1.fc39.x86_64 libnsl2-2.0.0-5.fc38.x86_64 libpkgconf-1.9.4-2.fc39.x86_64 libpsl-0.21.2-3.fc39.x86_64 libpwquality-1.4.5-3.fc38.x86_64 libselinux-3.5-1.fc39.x86_64 libsemanage-3.5-2.fc39.x86_64 libsepol-3.5-1.fc39.x86_64 libsigsegv-2.14-4.fc38.x86_64 libsmartcols-2.39-4.fc39.x86_64 libssh-0.10.5-1.fc39.x86_64 libssh-config-0.10.5-1.fc39.noarch libstdc++-13.1.1-4.fc39.x86_64 libtasn1-4.19.0-2.fc38.x86_64 libtirpc-1.3.3-1.rc1.fc39.x86_64 libunistring-1.1-3.fc38.x86_64 libunistring1.0-1.0-1.fc38.x86_64 libutempter-1.2.1-9.fc39.x86_64 libuuid-2.39-4.fc39.x86_64 libverto-0.3.2-5.fc38.x86_64 libxcrypt-4.4.35-1.fc39.x86_64 libxml2-2.10.4-1.fc39.x86_64 libzstd-1.5.5-1.fc39.x86_64 lua-libs-5.4.4-9.fc39.x86_64 lua-srpm-macros-1-8.fc38.noarch lz4-libs-1.9.4-3.fc39.x86_64 mpfr-4.1.1-3.fc38.x86_64 ncurses-base-6.4-4.20230520.fc39.noarch ncurses-libs-6.4-4.20230520.fc39.x86_64 ocaml-srpm-macros-7-3.fc38.noarch openblas-srpm-macros-2-13.fc38.noarch openldap-2.6.4-2.fc39.x86_64 openssl-libs-1:3.0.8-2.fc39.x86_64 p11-kit-0.24.1-6.fc38.x86_64 p11-kit-trust-0.24.1-6.fc38.x86_64 package-notes-srpm-macros-0.5-8.fc39.noarch pam-1.5.3-1.fc39.x86_64 pam-libs-1.5.3-1.fc39.x86_64 patch-2.7.6-21.fc39.x86_64 pcre2-10.42-1.fc38.1.x86_64 pcre2-syntax-10.42-1.fc38.1.noarch perl-srpm-macros-1-48.fc38.noarch pkgconf-1.9.4-2.fc39.x86_64 pkgconf-m4-1.9.4-2.fc39.noarch pkgconf-pkg-config-1.9.4-2.fc39.x86_64 popt-1.19-2.fc38.x86_64 publicsuffix-list-dafsa-20230614-1.fc39.noarch pyproject-srpm-macros-1.9.0-1.fc39.noarch python-srpm-macros-3.11-10.fc39.noarch qt5-srpm-macros-5.15.10-1.fc39.noarch qt6-srpm-macros-6.5.1-1.fc39.noarch readline-8.2-3.fc38.x86_64 redhat-rpm-config-255-1.fc39.noarch rpm-4.18.91-1.fc39.x86_64 rpm-build-4.18.91-1.fc39.x86_64 rpm-build-libs-4.18.91-1.fc39.x86_64 rpm-libs-4.18.91-1.fc39.x86_64 rpm-sequoia-1.4.0-3.fc39.x86_64 rpmautospec-rpm-macros-0.3.5-2.fc39.noarch rust-srpm-macros-24-2.fc39.noarch sed-4.8-12.fc38.x86_64 setup-2.14.3-3.fc39.noarch shadow-utils-2:4.13-7.fc39.x86_64 sqlite-libs-3.41.2-3.fc39.x86_64 systemd-libs-253.5-6.fc39.x86_64 tar-2:1.34-8.fc39.x86_64 tzdata-2023c-1.fc39.noarch unzip-6.0-60.fc38.x86_64 util-linux-2.39-4.fc39.x86_64 util-linux-core-2.39-4.fc39.x86_64 which-2.21-39.fc39.x86_64 xxhash-libs-0.8.1-5.fc39.x86_64 xz-5.4.3-1.fc39.x86_64 xz-libs-5.4.3-1.fc39.x86_64 zip-3.0-36.fc38.x86_64 zlib-1.2.13-3.fc38.x86_64 zstd-1.5.5-1.fc39.x86_64 Complete! Finish: installing minimal buildroot with dnf Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: fedora-gpg-keys-39-0.1.noarch pkgconf-m4-1.9.4-2.fc39.noarch fedora-release-common-39-0.14.noarch python-srpm-macros-3.11-10.fc39.noarch openblas-srpm-macros-2-13.fc38.noarch libbrotli-1.0.9-11.fc38.x86_64 libcap-2.48-6.fc38.x86_64 libdb-5.3.28-55.fc38.x86_64 lua-srpm-macros-1-8.fc38.noarch publicsuffix-list-dafsa-20230614-1.fc39.noarch elfutils-default-yama-scope-0.189-2.fc39.noarch audit-libs-3.1.1-1.fc39.x86_64 fpc-srpm-macros-1.3-7.fc38.noarch libeconf-0.4.0-5.fc38.x86_64 rpmautospec-rpm-macros-0.3.5-2.fc39.noarch fedora-release-identity-basic-39-0.14.noarch fedora-repos-rawhide-39-0.1.noarch elfutils-0.189-2.fc39.x86_64 package-notes-srpm-macros-0.5-8.fc39.noarch gnat-srpm-macros-6-2.fc38.noarch zip-3.0-36.fc38.x86_64 libtasn1-4.19.0-2.fc38.x86_64 keyutils-libs-1.6.1-6.fc38.x86_64 zstd-1.5.5-1.fc39.x86_64 glibc-2.37.9000-14.fc39.x86_64 libpwquality-1.4.5-3.fc38.x86_64 setup-2.14.3-3.fc39.noarch lua-libs-5.4.4-9.fc39.x86_64 cyrus-sasl-lib-2.1.28-10.fc39.x86_64 ed-1.19-2.fc38.x86_64 elfutils-libelf-0.189-2.fc39.x86_64 coreutils-9.3-1.fc39.x86_64 libssh-config-0.10.5-1.fc39.noarch readline-8.2-3.fc38.x86_64 glibc-gconv-extra-2.37.9000-14.fc39.x86_64 filesystem-3.18-4.fc39.x86_64 bzip2-libs-1.0.8-13.fc38.x86_64 libffi-3.4.4-2.fc38.x86_64 tzdata-2023c-1.fc39.noarch zlib-1.2.13-3.fc38.x86_64 unzip-6.0-60.fc38.x86_64 libuuid-2.39-4.fc39.x86_64 pkgconf-1.9.4-2.fc39.x86_64 libssh-0.10.5-1.fc39.x86_64 which-2.21-39.fc39.x86_64 jansson-2.13.1-6.fc38.x86_64 debugedit-5.0-7.fc38.x86_64 libsepol-3.5-1.fc39.x86_64 libblkid-2.39-4.fc39.x86_64 dwz-0.15-2.fc38.x86_64 ncurses-libs-6.4-4.20230520.fc39.x86_64 pcre2-10.42-1.fc38.1.x86_64 binutils-gold-2.40-9.fc39.x86_64 libunistring1.0-1.0-1.fc38.x86_64 sed-4.8-12.fc38.x86_64 file-5.44-3.fc39.x86_64 efi-srpm-macros-5-8.fc39.noarch libnghttp2-1.54.0-1.fc39.x86_64 authselect-libs-1.4.2-2.fc38.x86_64 crypto-policies-20230614-1.git5f3458e.fc39.noarch rpm-build-libs-4.18.91-1.fc39.x86_64 basesystem-11-17.fc39.noarch ocaml-srpm-macros-7-3.fc38.noarch popt-1.19-2.fc38.x86_64 diffutils-3.9-4.fc39.x86_64 binutils-2.40-9.fc39.x86_64 libgomp-13.1.1-4.fc39.x86_64 gzip-1.12-3.fc38.x86_64 gpg-pubkey-18b8e74c-62f2920f libxcrypt-4.4.35-1.fc39.x86_64 libpkgconf-1.9.4-2.fc39.x86_64 krb5-libs-1.21-1.fc39.x86_64 libgcc-13.1.1-4.fc39.x86_64 glibc-common-2.37.9000-14.fc39.x86_64 libcurl-8.1.2-1.fc39.x86_64 ghc-srpm-macros-1.6.1-1.fc38.noarch libnsl2-2.0.0-5.fc38.x86_64 glibc-minimal-langpack-2.37.9000-14.fc39.x86_64 coreutils-common-9.3-1.fc39.x86_64 alternatives-1.24-1.fc39.x86_64 libzstd-1.5.5-1.fc39.x86_64 libcap-ng-0.8.3-5.fc38.x86_64 cracklib-2.9.7-31.fc38.x86_64 fonts-srpm-macros-2.0.5-11.fc38.noarch libattr-2.5.1-7.fc39.x86_64 libacl-2.3.1-7.fc39.x86_64 elfutils-debuginfod-client-0.189-2.fc39.x86_64 pcre2-syntax-10.42-1.fc38.1.noarch gpg-pubkey-eb10b464-6202d9c6 grep-3.11-1.fc39.x86_64 file-libs-5.44-3.fc39.x86_64 p11-kit-0.24.1-6.fc38.x86_64 rpm-sequoia-1.4.0-3.fc39.x86_64 bzip2-1.0.8-13.fc38.x86_64 cpio-2.14-2.fc39.x86_64 libsemanage-3.5-2.fc39.x86_64 libxml2-2.10.4-1.fc39.x86_64 pkgconf-pkg-config-1.9.4-2.fc39.x86_64 libarchive-3.6.1-5.fc39.x86_64 findutils-4.9.0-4.fc39.x86_64 rpm-libs-4.18.91-1.fc39.x86_64 qt6-srpm-macros-6.5.1-1.fc39.noarch bash-5.2.15-3.fc38.x86_64 lz4-libs-1.9.4-3.fc39.x86_64 openldap-2.6.4-2.fc39.x86_64 util-linux-2.39-4.fc39.x86_64 gdbm-libs-1.23-3.fc38.x86_64 go-srpm-macros-3.2.0-3.fc39.noarch redhat-rpm-config-255-1.fc39.noarch rpm-build-4.18.91-1.fc39.x86_64 openssl-libs-3.0.8-2.fc39.x86_64 qt5-srpm-macros-5.15.10-1.fc39.noarch libsmartcols-2.39-4.fc39.x86_64 xz-5.4.3-1.fc39.x86_64 libsigsegv-2.14-4.fc38.x86_64 libidn2-2.3.4-2.fc38.x86_64 libtirpc-1.3.3-1.rc1.fc39.x86_64 ca-certificates-2023.2.60-2.fc38.noarch p11-kit-trust-0.24.1-6.fc38.x86_64 shadow-utils-4.13-7.fc39.x86_64 libverto-0.3.2-5.fc38.x86_64 info-7.0.3-2.fc39.x86_64 fedora-repos-39-0.1.noarch systemd-libs-253.5-6.fc39.x86_64 pyproject-srpm-macros-1.9.0-1.fc39.noarch libunistring-1.1-3.fc38.x86_64 libstdc++-13.1.1-4.fc39.x86_64 util-linux-core-2.39-4.fc39.x86_64 libpsl-0.21.2-3.fc39.x86_64 libfdisk-2.39-4.fc39.x86_64 libmount-2.39-4.fc39.x86_64 patch-2.7.6-21.fc39.x86_64 curl-8.1.2-1.fc39.x86_64 mpfr-4.1.1-3.fc38.x86_64 pam-libs-1.5.3-1.fc39.x86_64 gdb-minimal-13.1-5.fc39.x86_64 gawk-5.2.2-1.fc39.x86_64 xxhash-libs-0.8.1-5.fc39.x86_64 tar-1.34-8.fc39.x86_64 kernel-srpm-macros-1.0-19.fc39.noarch ansible-srpm-macros-1-10.fc39.noarch libcom_err-1.47.0-1.fc39.x86_64 perl-srpm-macros-1-48.fc38.noarch pam-1.5.3-1.fc39.x86_64 libevent-2.1.12-8.fc38.x86_64 libselinux-3.5-1.fc39.x86_64 xz-libs-5.4.3-1.fc39.x86_64 libutempter-1.2.1-9.fc39.x86_64 sqlite-libs-3.41.2-3.fc39.x86_64 elfutils-libs-0.189-2.fc39.x86_64 ncurses-base-6.4-4.20230520.fc39.noarch authselect-1.4.2-2.fc38.x86_64 rpm-4.18.91-1.fc39.x86_64 rust-srpm-macros-24-2.fc39.noarch fedora-release-39-0.14.noarch gmp-6.2.1-4.fc38.x86_64 Start: buildsrpm Start: rpmbuild -bs warning: %patchN is deprecated (3 usages found), use %patch N (or %patch -P N) Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1675209600 Wrote: /builddir/build/SRPMS/openms-2.8.0-0.5.fc39.src.rpm RPM build warnings: %patchN is deprecated (3 usages found), use %patch N (or %patch -P N) Finish: rpmbuild -bs INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-x86_64-1687862083.251117/root/var/log/dnf.rpm.log /var/lib/mock/fedora-rawhide-x86_64-1687862083.251117/root/var/log/dnf.librepo.log /var/lib/mock/fedora-rawhide-x86_64-1687862083.251117/root/var/log/dnf.log Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-xex0x358/openms/openms.spec) Config(child) 1 minutes 38 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running (timeout=115200): unbuffer mock --rebuild /var/lib/copr-rpmbuild/results/openms-2.8.0-0.5.fc39.src.rpm --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1687862083.251117 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 4.1 starting (python version = 3.11.3, NVR = mock-4.1-1.fc38)... Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/results/openms-2.8.0-0.5.fc39.src.rpm) Config(fedora-rawhide-x86_64) Start: clean chroot Finish: clean chroot Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1687862083.251117/root. INFO: reusing tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1687862083.251117/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: enabled HW Info plugin Mock Version: 4.1 INFO: Mock Version: 4.1 INFO: Package manager dnf detected and used (fallback) Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-1687862083.251117/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin Mock Version: 4.1 INFO: Mock Version: 4.1 INFO: Package manager dnf detected and used (direct choice) Start: dnf update No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 32 kB/s | 1.5 kB 00:00 fedora 515 kB/s | 23 kB 00:00 Dependencies resolved. Nothing to do. Complete! Finish: dnf update Finish: chroot init Start: build phase for openms-2.8.0-0.5.fc39.src.rpm Start: build setup for openms-2.8.0-0.5.fc39.src.rpm warning: %patchN is deprecated (3 usages found), use %patch N (or %patch -P N) Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1675209600 Wrote: /builddir/build/SRPMS/openms-2.8.0-0.5.fc39.src.rpm RPM build warnings: %patchN is deprecated (3 usages found), use %patch N (or %patch -P N) No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 30 kB/s | 1.5 kB 00:00 fedora 516 kB/s | 23 kB 00:00 Package gawk-5.2.2-1.fc39.x86_64 is already installed. Dependencies resolved. ================================================================================================= Package Arch Version Repo Size ================================================================================================= Installing: boost-devel x86_64 1.81.0-1.fc39 fedora 14 M bzip2-devel x86_64 1.0.8-13.fc38 fedora 214 k cmake x86_64 3.27.0~rc3-1.fc39 fedora 8.0 M coin-or-Cbc-devel x86_64 2.10.5-12.fc38 fedora 122 k coin-or-Cgl-devel x86_64 0.60.3-9.fc38 fedora 70 k coin-or-Clp-devel x86_64 1.17.6-12.fc38 fedora 143 k coin-or-CoinUtils-devel x86_64 2.11.4-9.fc38 fedora 145 k coin-or-Osi-devel x86_64 0.108.6-8.fc38 fedora 61 k desktop-file-utils x86_64 0.26-8.fc38 fedora 71 k dos2unix x86_64 7.5.0-1.fc39 fedora 298 k doxygen x86_64 2:1.9.7-2.fc39 fedora 5.0 M eigen3-devel noarch 3.4.0-10.fc39 fedora 1.2 M gcc-c++ x86_64 13.1.1-4.fc39 fedora 13 M glpk-devel x86_64 5.0-6.fc38 fedora 61 k gnuplot x86_64 5.4.8-1.fc39 fedora 839 k graphviz x86_64 8.0.5-1.fc39 fedora 5.0 M gsl-devel x86_64 2.7.1-4.fc38 fedora 653 k hdf5-devel x86_64 1.12.1-12.fc39 fedora 1.3 M libappstream-glib x86_64 0.8.2-3.fc39 fedora 408 k libsvm-devel x86_64 3.31-1.fc39 fedora 18 k make x86_64 1:4.4.1-1.fc39 fedora 589 k patchelf x86_64 0.18.0-1.fc39 fedora 124 k percolator x86_64 3.05-11.fc38 fedora 1.9 M qt5-qtbase-devel x86_64 5.15.10-1.fc39 fedora 3.5 M qt5-qtsvg-devel x86_64 5.15.10-1.fc39 fedora 32 k qt5-qtwebengine-devel x86_64 5.15.12-6.fc39 fedora 115 k qt5-qtwebkit-devel x86_64 5.212.0-0.76alpha4.fc39 fedora 70 k qt5-qtx11extras-devel x86_64 5.15.10-1.fc39 fedora 15 k sqlite-devel x86_64 3.41.2-3.fc39 fedora 144 k tbb-devel x86_64 2021.9.0-1.fc39 copr_base 213 k texlive noarch 11:2023-69.fc39 fedora 11 k texlive-a4wide noarch 11:svn20943.0-69.fc39 fedora 15 k texlive-xtab noarch 11:svn23347.2.3f-69.fc39 fedora 18 k wildmagic5-devel x86_64 5.17-15.fc38 fedora 538 k xerces-c-devel x86_64 3.2.3-8.fc38 fedora 509 k xorg-x11-server-Xvfb x86_64 1.20.14-23.fc39 fedora 888 k zlib-devel x86_64 1.2.13-3.fc38 fedora 45 k Installing dependencies: Lmod x86_64 8.7.25-1.fc39 fedora 260 k MUMPS x86_64 5.5.1-4.fc39 fedora 1.9 M MUMPS-common noarch 5.5.1-4.fc39 fedora 830 k adobe-mappings-cmap noarch 20230118-1.fc38 fedora 2.1 M adobe-mappings-cmap-deprecated noarch 20230118-1.fc38 fedora 113 k adobe-mappings-pdf noarch 20190401-3.fc38 fedora 698 k alsa-lib x86_64 1.2.9-3.fc39 fedora 518 k annobin-docs noarch 12.12-1.fc39 fedora 95 k annobin-plugin-gcc x86_64 12.12-1.fc39 fedora 894 k autoconf noarch 2.71-5.fc38 fedora 733 k automake noarch 1.16.5-12.fc39 fedora 696 k avahi-libs x86_64 0.8-23.fc39 fedora 67 k biber noarch 2.19-1.fc39 fedora 292 k boost x86_64 1.81.0-1.fc39 fedora 14 k boost-atomic x86_64 1.81.0-1.fc39 fedora 20 k boost-chrono x86_64 1.81.0-1.fc39 fedora 26 k boost-container x86_64 1.81.0-1.fc39 fedora 40 k boost-context x86_64 1.81.0-1.fc39 fedora 17 k boost-contract x86_64 1.81.0-1.fc39 fedora 46 k boost-coroutine x86_64 1.81.0-1.fc39 fedora 20 k boost-date-time x86_64 1.81.0-1.fc39 fedora 16 k boost-fiber x86_64 1.81.0-1.fc39 fedora 42 k boost-filesystem x86_64 1.81.0-1.fc39 fedora 66 k boost-graph x86_64 1.81.0-1.fc39 fedora 151 k boost-iostreams x86_64 1.81.0-1.fc39 fedora 42 k boost-json x86_64 1.81.0-1.fc39 fedora 110 k boost-locale x86_64 1.81.0-1.fc39 fedora 222 k boost-log x86_64 1.81.0-1.fc39 fedora 491 k boost-math x86_64 1.81.0-1.fc39 fedora 221 k boost-nowide x86_64 1.81.0-1.fc39 fedora 21 k boost-numpy3 x86_64 1.81.0-1.fc39 fedora 30 k boost-program-options x86_64 1.81.0-1.fc39 fedora 109 k boost-python3 x86_64 1.81.0-1.fc39 fedora 97 k boost-random x86_64 1.81.0-1.fc39 fedora 24 k boost-regex x86_64 1.81.0-1.fc39 fedora 111 k boost-serialization x86_64 1.81.0-1.fc39 fedora 136 k boost-stacktrace x86_64 1.81.0-1.fc39 fedora 31 k boost-system x86_64 1.81.0-1.fc39 fedora 16 k boost-test x86_64 1.81.0-1.fc39 fedora 239 k boost-thread x86_64 1.81.0-1.fc39 fedora 58 k boost-timer x86_64 1.81.0-1.fc39 fedora 24 k boost-type_erasure x86_64 1.81.0-1.fc39 fedora 33 k boost-wave x86_64 1.81.0-1.fc39 fedora 225 k byte-buddy noarch 1.14.2-1.fc39 fedora 3.2 M byte-buddy-agent noarch 1.14.2-1.fc39 fedora 215 k cairo x86_64 1.17.8-4.fc39 fedora 706 k cairo-gobject x86_64 1.17.8-4.fc39 fedora 18 k cdparanoia-libs x86_64 10.2-41.fc38 fedora 54 k clang-libs x86_64 16.0.5-3.fc39 fedora 22 M clang-resource-filesystem x86_64 16.0.5-3.fc39 fedora 13 k cliquer-libs x86_64 1.22-5.fc38 fedora 38 k cmake-data noarch 3.27.0~rc3-1.fc39 fedora 2.2 M cmake-filesystem x86_64 3.27.0~rc3-1.fc39 fedora 18 k cmake-rpm-macros noarch 3.27.0~rc3-1.fc39 fedora 17 k coin-or-Cbc x86_64 2.10.5-12.fc38 fedora 833 k coin-or-Cgl x86_64 0.60.3-9.fc38 fedora 432 k coin-or-Clp x86_64 1.17.6-12.fc38 fedora 938 k coin-or-CoinUtils x86_64 2.11.4-9.fc38 fedora 482 k coin-or-Osi x86_64 0.108.6-8.fc38 fedora 320 k coin-or-Sample noarch 1.2.12-7.fc38 fedora 179 k copy-jdk-configs noarch 4.1-2.fc38 fedora 28 k cpp x86_64 13.1.1-4.fc39 fedora 11 M crypto-policies-scripts noarch 20230614-1.git5f3458e.fc39 fedora 116 k cups-libs x86_64 1:2.4.4-1.fc39 fedora 268 k dbus-libs x86_64 1:1.14.8-1.fc39 fedora 156 k dejavu-sans-fonts noarch 2.37-20.fc38 fedora 1.3 M double-conversion x86_64 3.1.5-8.fc38 fedora 49 k duktape x86_64 2.7.0-4.fc39 fedora 170 k emacs-filesystem noarch 1:28.2-6.fc39 fedora 7.8 k expat x86_64 2.5.0-2.fc38 fedora 110 k flexiblas x86_64 3.3.1-3.fc39 fedora 33 k flexiblas-netlib x86_64 3.3.1-3.fc39 fedora 3.1 M flexiblas-openblas-openmp x86_64 3.3.1-3.fc39 fedora 17 k fontconfig x86_64 2.14.2-3.fc39 fedora 296 k fonts-filesystem noarch 1:2.0.5-11.fc38 fedora 8.1 k freetype x86_64 2.13.0-1.fc39 fedora 413 k fribidi x86_64 1.0.13-1.fc39 fedora 90 k gc x86_64 8.2.2-3.fc38 fedora 110 k gcc x86_64 13.1.1-4.fc39 fedora 34 M gcc-gfortran x86_64 13.1.1-4.fc39 fedora 12 M gcc-plugin-annobin x86_64 13.1.1-4.fc39 fedora 45 k gd x86_64 2.3.3-11.fc39 fedora 139 k gdk-pixbuf2 x86_64 2.42.10-2.fc38 fedora 485 k gecode x86_64 6.2.0-11.fc38 fedora 3.2 M ghostscript x86_64 10.01.0-3.fc39 fedora 37 k ghostscript-tools-fonts x86_64 10.01.0-3.fc39 fedora 12 k ghostscript-tools-printing x86_64 10.01.0-3.fc39 fedora 13 k glib2 x86_64 2.76.3-1.fc39 fedora 2.8 M glibc-devel x86_64 2.37.9000-14.fc39 fedora 74 k glibc-headers-x86 noarch 2.37.9000-14.fc39 fedora 556 k glpk x86_64 5.0-6.fc38 fedora 387 k glx-utils x86_64 9.0.0-1.fc39 fedora 77 k gnuplot-common x86_64 5.4.8-1.fc39 fedora 803 k gnutls x86_64 3.8.0-6.fc39 fedora 1.1 M google-droid-sans-fonts noarch 20200215-15.fc39 fedora 2.7 M google-noto-fonts-common noarch 20230601-3.fc39 fedora 16 k google-noto-sans-vf-fonts noarch 20230601-3.fc39 fedora 582 k graphene x86_64 1.10.6-5.fc38 fedora 62 k graphite2 x86_64 1.3.14-11.fc38 fedora 95 k groff-base x86_64 1.22.4-11.fc38 fedora 1.1 M gsl x86_64 2.7.1-4.fc38 fedora 1.1 M gstreamer1 x86_64 1.22.4-1.fc39 fedora 1.4 M gstreamer1-plugins-base x86_64 1.22.3-2.fc39 fedora 2.2 M gts x86_64 0.7.6-45.20121130.fc39 fedora 239 k guile22 x86_64 2.2.7-8.fc39 fedora 6.5 M harfbuzz x86_64 7.3.0-1.fc39 fedora 912 k hdf5 x86_64 1.12.1-12.fc39 fedora 2.2 M highway x86_64 1.0.4-1.fc39 fedora 399 k hwdata noarch 0.371-1.fc39 fedora 1.6 M hwloc-libs x86_64 2.9.0-6.fc39 fedora 2.2 M hyphen x86_64 2.8.8-20.fc39 fedora 29 k iso-codes noarch 4.15.0-1.fc39 fedora 3.5 M jacop noarch 4.9.0-1.fc39 fedora 1.7 M java-17-openjdk-headless x86_64 1:17.0.7.0.7-5.fc39 fedora 45 M javapackages-filesystem noarch 6.1.0-8.fc39 fedora 13 k javapackages-tools noarch 6.1.0-8.fc39 fedora 37 k jbig2dec-libs x86_64 0.19-8.fc38 fedora 73 k jbigkit-libs x86_64 2.1-25.fc38 fedora 53 k json-glib x86_64 1.6.6-4.fc38 fedora 162 k jsoncpp x86_64 1.9.5-4.fc38 fedora 97 k kernel-headers x86_64 6.4.0-0.rc7.git0.1.fc39 fedora 1.5 M langpacks-core-font-en noarch 3.0-34.fc39 fedora 9.9 k lasi x86_64 1.1.3-10.fc38 fedora 53 k lcms2 x86_64 2.15-1.fc39 fedora 177 k libICE x86_64 1.0.10-10.fc38 fedora 71 k libSM x86_64 1.2.3-12.fc38 fedora 41 k 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fedora 21 k perl-Tie noarch 4.6-497.fc39 fedora 33 k perl-Tie-Cycle noarch 1.227-8.fc38 fedora 19 k perl-Tie-RefHash noarch 1.40-490.fc38 fedora 23 k perl-Time-HiRes x86_64 4:1.9775-1.fc39 fedora 57 k perl-Time-Local noarch 2:1.350-1.fc39 fedora 34 k perl-TimeDate noarch 1:2.33-10.fc38 fedora 58 k perl-Try-Tiny noarch 0.31-5.fc38 fedora 41 k perl-URI noarch 5.19-1.fc39 fedora 120 k perl-Unicode-Collate x86_64 1.31-491.fc39 fedora 748 k perl-Unicode-LineBreak x86_64 2019.001-15.fc38 fedora 120 k perl-Unicode-Normalize x86_64 1.32-1.fc39 fedora 94 k perl-Unicode-UCD noarch 0.78-497.fc39 fedora 80 k perl-Variable-Magic x86_64 0.63-2.fc38 fedora 54 k perl-WWW-RobotRules noarch 6.02-36.fc38 fedora 20 k perl-XML-LibXML x86_64 1:2.0208-2.fc38 fedora 352 k perl-XML-LibXML-Simple noarch 1.01-11.fc38 fedora 33 k perl-XML-LibXSLT x86_64 2.002.001-1.fc39 fedora 69 k perl-XML-NamespaceSupport noarch 1.12-19.fc38 fedora 26 k perl-XML-Parser x86_64 2.46-13.fc38 fedora 235 k perl-XML-SAX noarch 1.02-12.fc38 fedora 63 k perl-XML-SAX-Base noarch 1.09-19.fc38 fedora 32 k perl-XML-Writer noarch 0.900-11.fc39 fedora 34 k perl-XML-XPath noarch 1.48-3.fc38 fedora 87 k perl-XString x86_64 0.005-8.fc39 fedora 23 k perl-autodie noarch 2.36-1.fc38 fedora 96 k perl-autovivification x86_64 0.18-18.fc39 fedora 33 k perl-base noarch 2.27-497.fc39 fedora 17 k perl-constant noarch 1.33-492.fc39 fedora 23 k perl-deprecate noarch 0.04-497.fc39 fedora 16 k perl-encoding x86_64 4:3.00-493.fc38 fedora 63 k perl-if noarch 0.61.000-497.fc39 fedora 15 k perl-interpreter x86_64 4:5.36.1-497.fc39 fedora 73 k perl-libnet noarch 3.15-1.fc39 fedora 128 k perl-libs x86_64 4:5.36.1-497.fc39 fedora 2.2 M perl-libwww-perl noarch 6.71-1.fc39 fedora 206 k perl-locale noarch 1.10-497.fc39 fedora 15 k perl-meta-notation noarch 5.36.1-497.fc39 fedora 11 k perl-mro x86_64 1.26-497.fc39 fedora 30 k perl-namespace-autoclean noarch 0.29-15.fc39 fedora 25 k perl-namespace-clean noarch 0.27-23.fc39 fedora 34 k perl-open noarch 1.13-497.fc39 fedora 18 k perl-overload noarch 1.35-497.fc39 fedora 47 k perl-overloading noarch 0.02-497.fc39 fedora 14 k perl-parent noarch 1:0.241-1.fc39 fedora 14 k perl-podlators noarch 1:5.01-2.fc38 fedora 125 k perl-sigtrap noarch 1.10-497.fc39 fedora 17 k perl-subs noarch 1.04-497.fc39 fedora 13 k perl-threads x86_64 1:2.27-490.fc38 fedora 57 k perl-threads-shared x86_64 1.68-1.fc39 fedora 44 k perl-vars noarch 1.05-497.fc39 fedora 14 k perl-version x86_64 8:0.99.29-491.fc38 fedora 62 k perltidy noarch 20230309-1.fc39 fedora 691 k pixman x86_64 0.42.2-1.fc39 fedora 284 k poppler x86_64 23.02.0-1.fc38 fedora 1.2 M poppler-data noarch 0.4.11-4.fc38 fedora 2.0 M poppler-glib x86_64 23.02.0-1.fc38 fedora 177 k procps-ng x86_64 4.0.3-1.fc39 fedora 373 k python-pip-wheel noarch 23.1.2-1.fc39 fedora 1.4 M python-setuptools-wheel noarch 67.7.2-2.fc39 fedora 661 k python3 x86_64 3.11.4-1.fc39 fedora 28 k python3-libs x86_64 3.11.4-1.fc39 fedora 9.6 M python3-numpy x86_64 1:1.24.3-1.fc39 fedora 7.9 M qt-settings noarch 38.2-2.fc39 fedora 10 k qt5-qtbase x86_64 5.15.10-1.fc39 fedora 3.5 M qt5-qtbase-common noarch 5.15.10-1.fc39 fedora 11 k qt5-qtbase-gui x86_64 5.15.10-1.fc39 fedora 6.4 M qt5-qtdeclarative x86_64 5.15.10-1.fc39 fedora 4.3 M qt5-qtdeclarative-devel x86_64 5.15.10-1.fc39 fedora 1.5 M qt5-qtlocation x86_64 5.15.10-1.fc39 fedora 3.2 M qt5-qtlocation-devel x86_64 5.15.10-1.fc39 fedora 199 k qt5-qtsensors x86_64 5.15.10-1.fc39 fedora 230 k qt5-qtsvg x86_64 5.15.10-1.fc39 fedora 185 k qt5-qttools-common noarch 5.15.10-1.fc39 fedora 11 k qt5-qttools-libs-designer x86_64 5.15.10-1.fc39 fedora 2.7 M qt5-qtwebchannel x86_64 5.15.10-1.fc39 fedora 100 k qt5-qtwebchannel-devel x86_64 5.15.10-1.fc39 fedora 27 k qt5-qtwebengine x86_64 5.15.12-6.fc39 fedora 53 M qt5-qtwebengine-devtools x86_64 5.15.12-6.fc39 fedora 1.9 M qt5-qtwebkit x86_64 5.212.0-0.76alpha4.fc39 fedora 13 M qt5-qtx11extras x86_64 5.15.10-1.fc39 fedora 35 k qt5-rpm-macros noarch 5.15.10-1.fc39 fedora 9.5 k rav1e-libs x86_64 0.5.1-9.fc39 fedora 890 k re2 x86_64 1:20220601-2.fc38 fedora 197 k readline-devel x86_64 8.2-3.fc38 fedora 207 k rhash x86_64 1.4.3-2.fc38 fedora 194 k scotch x86_64 7.0.3-2.fc39 fedora 278 k scotch-devel x86_64 7.0.3-2.fc39 fedora 24 k shared-mime-info x86_64 2.2-3.fc38 fedora 381 k snappy x86_64 1.1.10-2.fc39 fedora 37 k sombok x86_64 2.4.0-18.fc38 fedora 48 k sqlite x86_64 3.41.2-3.fc39 fedora 820 k suitesparse x86_64 5.13.0-2.fc38 fedora 1.1 M svt-av1-libs x86_64 1.4.1-2.fc38 fedora 2.0 M tbb x86_64 2021.9.0-1.fc39 copr_base 159 k tbb-bind x86_64 2021.9.0-1.fc39 copr_base 18 k tcl x86_64 1:8.6.12-4.fc39 fedora 1.1 M teckit x86_64 2.5.11-1.fc39 fedora 454 k texlive-ae noarch 11:svn15878.1.4-69.fc39 fedora 116 k texlive-algorithms noarch 11:svn42428-69.fc39 fedora 23 k texlive-alphalph noarch 11:svn53087-69.fc39 fedora 361 k texlive-amscls noarch 11:svn55378-69.fc39 fedora 1.1 M texlive-amsfonts noarch 11:svn61937-69.fc39 fedora 3.7 M texlive-amsmath noarch 11:svn63514-69.fc39 fedora 46 k texlive-anysize noarch 11:svn15878.0-69.fc39 fedora 12 k texlive-atbegshi noarch 11:svn53051-69.fc39 fedora 409 k texlive-attachfile noarch 11:svn42099-69.fc39 fedora 22 k texlive-attachfile2 noarch 11:svn57959-75.fc39 fedora 447 k texlive-atveryend noarch 11:svn53108-69.fc39 fedora 385 k texlive-auto-pst-pdf noarch 11:svn56596-69.fc39 fedora 17 k texlive-auxhook noarch 11:svn53173-69.fc39 fedora 295 k texlive-avantgar noarch 11:svn61983-69.fc39 fedora 322 k texlive-babel noarch 11:svn65823-69.fc39 fedora 480 k texlive-babel-english noarch 11:svn44495-69.fc39 fedora 21 k texlive-babelbib noarch 11:svn57349-69.fc39 fedora 54 k texlive-base x86_64 11:20230311-75.fc39 fedora 2.6 M texlive-beamer noarch 11:svn65984-69.fc39 fedora 228 k texlive-bera noarch 11:svn20031.0-69.fc39 fedora 356 k texlive-beton noarch 11:svn15878.0-69.fc39 fedora 16 k texlive-biblatex noarch 11:svn66403-69.fc39 fedora 305 k texlive-bibtex x86_64 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texlive-collection-basic noarch 11:svn59159-69.fc39 fedora 11 k texlive-collection-latex noarch 11:svn63515-69.fc39 fedora 12 k texlive-collection-latexrecommended noarch 11:svn65512-69.fc39 fedora 12 k texlive-colorprofiles noarch 11:svn49086-69.fc39 fedora 146 k texlive-colortbl noarch 11:svn64015-69.fc39 fedora 18 k texlive-courier noarch 11:svn61719-69.fc39 fedora 525 k texlive-crop noarch 11:svn55424-69.fc39 fedora 19 k texlive-csquotes noarch 11:svn64389-69.fc39 fedora 36 k texlive-ctable noarch 11:svn38672-69.fc39 fedora 18 k texlive-ctablestack noarch 11:svn38514-69.fc39 fedora 18 k texlive-currfile noarch 11:svn64673-69.fc39 fedora 21 k texlive-dehyph noarch 11:svn48599-69.fc39 fedora 66 k texlive-dvipdfmx x86_64 11:svn66203-75.fc39 fedora 3.0 M texlive-dvips x86_64 11:svn66203-75.fc39 fedora 737 k texlive-ec noarch 11:svn25033.1.0-69.fc39 fedora 682 k texlive-enctex noarch 11:svn34957.0-69.fc39 fedora 54 k texlive-enumitem noarch 11:svn51423-69.fc39 fedora 28 k 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texlive-pdfcol noarch 11:svn64469-69.fc39 fedora 327 k texlive-pdfcolfoot noarch 11:svn65512-69.fc39 fedora 319 k texlive-pdfcolmk noarch 11:svn52912-69.fc39 fedora 18 k texlive-pdfescape noarch 11:svn53082-69.fc39 fedora 353 k texlive-pdflscape noarch 11:svn64851-69.fc39 fedora 324 k texlive-pdfmanagement-testphase noarch 11:svn66532-69.fc39 fedora 8.3 M texlive-pdfpages noarch 11:svn65319-69.fc39 fedora 32 k texlive-pdftex x86_64 11:svn66243-75.fc39 fedora 2.5 M texlive-pdftexcmds noarch 11:svn55777-69.fc39 fedora 391 k texlive-pgf noarch 11:svn65553-69.fc39 fedora 897 k texlive-picture noarch 11:svn54867-69.fc39 fedora 312 k texlive-placeins noarch 11:svn19848.2.2-69.fc39 fedora 13 k texlive-plain noarch 11:svn57963-69.fc39 fedora 48 k texlive-polyglossia noarch 11:svn65792-69.fc39 fedora 220 k texlive-psfrag noarch 11:svn15878.3.04-69.fc39 fedora 15 k texlive-pslatex noarch 11:svn57434-69.fc39 fedora 22 k texlive-psnfss noarch 11:svn54694-69.fc39 fedora 60 k texlive-pspicture noarch 11:svn15878.0-69.fc39 fedora 16 k texlive-pst-3d noarch 11:svn17257.1.10-69.fc39 fedora 18 k texlive-pst-coil noarch 11:svn62977-69.fc39 fedora 18 k texlive-pst-eps noarch 11:svn15878.1.0-69.fc39 fedora 17 k texlive-pst-fill noarch 11:svn60671-69.fc39 fedora 18 k texlive-pst-grad noarch 11:svn15878.1.06-69.fc39 fedora 18 k texlive-pst-math noarch 11:svn64732-69.fc39 fedora 20 k texlive-pst-node noarch 11:svn61838-69.fc39 fedora 40 k texlive-pst-ovl noarch 11:svn54963-69.fc39 fedora 16 k texlive-pst-plot noarch 11:svn65346-69.fc39 fedora 37 k texlive-pst-text noarch 11:svn49542-69.fc39 fedora 19 k texlive-pst-tools noarch 11:svn60621-69.fc39 fedora 21 k texlive-pst-tree noarch 11:svn60421-69.fc39 fedora 21 k texlive-pstricks noarch 11:svn65346-69.fc39 fedora 117 k texlive-pstricks-add noarch 11:svn65067-69.fc39 fedora 37 k texlive-ragged2e noarch 11:svn66152-69.fc39 fedora 682 k texlive-rcs noarch 11:svn15878.0-69.fc39 fedora 28 k texlive-realscripts noarch 11:svn56594-69.fc39 fedora 19 k texlive-refcount noarch 11:svn53164-69.fc39 fedora 335 k texlive-rerunfilecheck noarch 11:svn63869-69.fc39 fedora 341 k texlive-rsfs noarch 11:svn15878.0-69.fc39 fedora 73 k texlive-sansmath noarch 11:svn17997.1.1-69.fc39 fedora 14 k texlive-sansmathaccent noarch 11:svn53628-69.fc39 fedora 36 k texlive-sauerj noarch 11:svn15878.0-69.fc39 fedora 20 k texlive-scheme-basic noarch 11:svn54191-69.fc39 fedora 11 k texlive-section noarch 11:svn20180.0-69.fc39 fedora 24 k texlive-seminar noarch 11:svn59801-69.fc39 fedora 52 k texlive-sepnum noarch 11:svn20186.2.0-69.fc39 fedora 17 k texlive-setspace noarch 11:svn65206-69.fc39 fedora 18 k texlive-showexpl noarch 11:svn57414-69.fc39 fedora 18 k texlive-stringenc noarch 11:svn52982-69.fc39 fedora 702 k texlive-subfig noarch 11:svn15878.1.3-69.fc39 fedora 21 k texlive-symbol noarch 11:svn61719-69.fc39 fedora 54 k texlive-tex x86_64 11:svn66186-75.fc39 fedora 211 k texlive-tex-ini-files noarch 11:svn40533-69.fc39 fedora 15 k texlive-texlive-common-doc noarch 11:svn54176-69.fc39 fedora 158 k texlive-texlive-en noarch 11:svn66572-75.fc39 fedora 2.0 M texlive-texlive-msg-translations noarch 11:svn66593-69.fc39 fedora 165 k texlive-texlive-scripts noarch 11:svn66584-75.fc39 fedora 122 k texlive-texlive.infra noarch 11:svn66512-75.fc39 fedora 295 k texlive-textcase noarch 11:svn63868-69.fc39 fedora 16 k texlive-thumbpdf noarch 11:svn62518-75.fc39 fedora 41 k texlive-times noarch 11:svn61719-69.fc39 fedora 368 k texlive-tipa noarch 11:svn29349.1.3-69.fc39 fedora 2.8 M texlive-titlesec noarch 11:svn59845-69.fc39 fedora 34 k texlive-tools noarch 11:svn64892-69.fc39 fedora 75 k texlive-translator noarch 11:svn59412-69.fc39 fedora 296 k texlive-transparent noarch 11:svn64852-69.fc39 fedora 286 k texlive-typehtml noarch 11:svn17134.0-69.fc39 fedora 21 k texlive-ucharcat noarch 11:svn38907-69.fc39 fedora 15 k texlive-ucs noarch 11:svn64114-69.fc39 fedora 423 k texlive-underscore noarch 11:svn18261.0-69.fc39 fedora 19 k texlive-unicode-data noarch 11:svn64423-69.fc39 fedora 371 k texlive-unicode-math noarch 11:svn61719-69.fc39 fedora 63 k texlive-uniquecounter noarch 11:svn53162-69.fc39 fedora 300 k texlive-url noarch 11:svn32528.3.4-69.fc39 fedora 20 k texlive-utopia noarch 11:svn15878.0-69.fc39 fedora 239 k texlive-varwidth noarch 11:svn24104.0.92-69.fc39 fedora 18 k texlive-xcolor noarch 11:svn63563-69.fc39 fedora 32 k texlive-xdvi x86_64 11:svn62387-75.fc39 fedora 351 k texlive-xetex x86_64 11:svn66203-75.fc39 fedora 1.3 M texlive-xetexconfig noarch 11:svn45845-69.fc39 fedora 11 k texlive-xifthen noarch 11:svn38929-69.fc39 fedora 16 k texlive-xkeyval noarch 11:svn63616-69.fc39 fedora 27 k texlive-xltxtra noarch 11:svn56594-69.fc39 fedora 17 k texlive-xpatch noarch 11:svn54563-69.fc39 fedora 19 k texlive-xstring noarch 11:svn65551-69.fc39 fedora 25 k texlive-xunicode noarch 11:svn30466.0.981-69.fc39 fedora 44 k texlive-zapfding noarch 11:svn61719-69.fc39 fedora 64 k texlive-zref noarch 11:svn62977-69.fc39 fedora 688 k tokyocabinet x86_64 1.4.48-22.fc39 fedora 519 k tzdata-java noarch 2023c-1.fc39 fedora 208 k unixODBC x86_64 2.3.11-3.fc39 fedora 481 k urw-base35-bookman-fonts noarch 20200910-16.fc38 fedora 848 k urw-base35-c059-fonts noarch 20200910-16.fc38 fedora 875 k urw-base35-d050000l-fonts noarch 20200910-16.fc38 fedora 76 k urw-base35-fonts noarch 20200910-16.fc38 fedora 11 k urw-base35-fonts-common noarch 20200910-16.fc38 fedora 21 k urw-base35-gothic-fonts noarch 20200910-16.fc38 fedora 643 k urw-base35-nimbus-mono-ps-fonts noarch 20200910-16.fc38 fedora 796 k urw-base35-nimbus-roman-fonts noarch 20200910-16.fc38 fedora 857 k urw-base35-nimbus-sans-fonts noarch 20200910-16.fc38 fedora 1.3 M urw-base35-p052-fonts noarch 20200910-16.fc38 fedora 974 k urw-base35-standard-symbols-ps-fonts noarch 20200910-16.fc38 fedora 42 k urw-base35-z003-fonts noarch 20200910-16.fc38 fedora 276 k vim-filesystem noarch 2:9.0.1649-1.fc39 fedora 18 k vulkan-headers noarch 1.3.250.0-1.fc39 fedora 1.1 M vulkan-loader x86_64 1.3.250.0-1.fc39 fedora 143 k vulkan-loader-devel x86_64 1.3.250.0-1.fc39 fedora 9.3 k wildmagic5 x86_64 5.17-15.fc38 fedora 1.9 M woff2 x86_64 1.0.2-17.fc38 fedora 61 k xapian-core-libs x86_64 1.4.22-1.fc39 fedora 768 k xcb-util x86_64 0.4.1-2.fc38 fedora 19 k xcb-util-image x86_64 0.4.1-2.fc38 fedora 19 k xcb-util-keysyms x86_64 0.4.1-2.fc38 fedora 14 k xcb-util-renderutil x86_64 0.3.10-2.fc38 fedora 17 k xcb-util-wm x86_64 0.4.2-2.fc38 fedora 31 k xerces-c x86_64 3.2.3-8.fc38 fedora 963 k xkbcomp x86_64 1.4.6-5.fc38 fedora 101 k xkeyboard-config noarch 2.39-1.fc39 fedora 962 k xml-common noarch 0.6.3-60.fc38 fedora 31 k xorg-x11-fonts-ISO8859-1-100dpi noarch 7.5-35.fc38 fedora 1.1 M xorg-x11-proto-devel noarch 2023.2-1.fc39 fedora 297 k xorg-x11-server-common x86_64 1.20.14-23.fc39 fedora 35 k xorg-x11-xauth x86_64 1:1.1.2-3.fc38 fedora 36 k xpdf-libs x86_64 1:4.04-9.fc39 fedora 647 k zziplib x86_64 0.13.72-3.fc38 fedora 86 k Transaction Summary ================================================================================================= Install 875 Packages Total download size: 688 M Installed size: 2.2 G Downloading Packages: (1/875): tbb-bind-2021.9.0-1.fc39.x86_64.rpm 357 kB/s | 18 kB 00:00 (2/875): tbb-2021.9.0-1.fc39.x86_64.rpm 2.5 MB/s | 159 kB 00:00 (3/875): tbb-devel-2021.9.0-1.fc39.x86_64.rpm 2.8 MB/s | 213 kB 00:00 (4/875): Lmod-8.7.25-1.fc39.x86_64.rpm 1.8 MB/s | 260 kB 00:00 (5/875): adobe-mappings-cmap-20230118-1.fc38.no 22 MB/s | 2.1 MB 00:00 (6/875): MUMPS-common-5.5.1-4.fc39.noarch.rpm 3.7 MB/s | 830 kB 00:00 (7/875): MUMPS-5.5.1-4.fc39.x86_64.rpm 8.0 MB/s | 1.9 MB 00:00 (8/875): adobe-mappings-cmap-deprecated-2023011 6.2 MB/s | 113 kB 00:00 (9/875): adobe-mappings-pdf-20190401-3.fc38.noa 27 MB/s | 698 kB 00:00 (10/875): alsa-lib-1.2.9-3.fc39.x86_64.rpm 19 MB/s | 518 kB 00:00 (11/875): annobin-docs-12.12-1.fc39.noarch.rpm 4.3 MB/s | 95 kB 00:00 (12/875): autoconf-2.71-5.fc38.noarch.rpm 10 MB/s | 733 kB 00:00 (13/875): automake-1.16.5-12.fc39.noarch.rpm 9.3 MB/s | 696 kB 00:00 (14/875): annobin-plugin-gcc-12.12-1.fc39.x86_6 9.9 MB/s | 894 kB 00:00 (15/875): boost-1.81.0-1.fc39.x86_64.rpm 445 kB/s | 14 kB 00:00 (16/875): avahi-libs-0.8-23.fc39.x86_64.rpm 983 kB/s | 67 kB 00:00 (17/875): boost-atomic-1.81.0-1.fc39.x86_64.rpm 639 kB/s | 20 kB 00:00 (18/875): boost-chrono-1.81.0-1.fc39.x86_64.rpm 802 kB/s | 26 kB 00:00 (19/875): boost-context-1.81.0-1.fc39.x86_64.rp 1.0 MB/s | 17 kB 00:00 (20/875): boost-container-1.81.0-1.fc39.x86_64. 859 kB/s | 40 kB 00:00 (21/875): boost-coroutine-1.81.0-1.fc39.x86_64. 611 kB/s | 20 kB 00:00 (22/875): boost-contract-1.81.0-1.fc39.x86_64.r 890 kB/s | 46 kB 00:00 (23/875): boost-date-time-1.81.0-1.fc39.x86_64. 946 kB/s | 16 kB 00:00 (24/875): biber-2.19-1.fc39.noarch.rpm 1.5 MB/s | 292 kB 00:00 (25/875): boost-fiber-1.81.0-1.fc39.x86_64.rpm 604 kB/s | 42 kB 00:00 (26/875): boost-filesystem-1.81.0-1.fc39.x86_64 1.4 MB/s | 66 kB 00:00 (27/875): boost-iostreams-1.81.0-1.fc39.x86_64. 1.2 MB/s | 42 kB 00:00 (28/875): boost-json-1.81.0-1.fc39.x86_64.rpm 1.3 MB/s | 110 kB 00:00 (29/875): boost-graph-1.81.0-1.fc39.x86_64.rpm 869 kB/s | 151 kB 00:00 (30/875): boost-locale-1.81.0-1.fc39.x86_64.rpm 1.5 MB/s | 222 kB 00:00 (31/875): boost-math-1.81.0-1.fc39.x86_64.rpm 1.5 MB/s | 221 kB 00:00 (32/875): boost-nowide-1.81.0-1.fc39.x86_64.rpm 1.1 MB/s | 21 kB 00:00 (33/875): boost-numpy3-1.81.0-1.fc39.x86_64.rpm 1.8 MB/s | 30 kB 00:00 (34/875): boost-program-options-1.81.0-1.fc39.x 1.5 MB/s | 109 kB 00:00 (35/875): boost-log-1.81.0-1.fc39.x86_64.rpm 1.3 MB/s | 491 kB 00:00 (36/875): boost-python3-1.81.0-1.fc39.x86_64.rp 2.0 MB/s | 97 kB 00:00 (37/875): boost-random-1.81.0-1.fc39.x86_64.rpm 807 kB/s | 24 kB 00:00 (38/875): boost-regex-1.81.0-1.fc39.x86_64.rpm 1.3 MB/s | 111 kB 00:00 (39/875): boost-stacktrace-1.81.0-1.fc39.x86_64 1.8 MB/s | 31 kB 00:00 (40/875): boost-system-1.81.0-1.fc39.x86_64.rpm 810 kB/s | 16 kB 00:00 (41/875): boost-serialization-1.81.0-1.fc39.x86 1.2 MB/s | 136 kB 00:00 (42/875): boost-thread-1.81.0-1.fc39.x86_64.rpm 1.1 MB/s | 58 kB 00:00 (43/875): boost-timer-1.81.0-1.fc39.x86_64.rpm 960 kB/s | 24 kB 00:00 (44/875): boost-test-1.81.0-1.fc39.x86_64.rpm 1.9 MB/s | 239 kB 00:00 (45/875): boost-type_erasure-1.81.0-1.fc39.x86_ 918 kB/s | 33 kB 00:00 (46/875): boost-wave-1.81.0-1.fc39.x86_64.rpm 2.2 MB/s | 225 kB 00:00 (47/875): byte-buddy-agent-1.14.2-1.fc39.noarch 2.2 MB/s | 215 kB 00:00 (48/875): bzip2-devel-1.0.8-13.fc38.x86_64.rpm 2.2 MB/s | 214 kB 00:00 (49/875): cairo-1.17.8-4.fc39.x86_64.rpm 2.6 MB/s | 706 kB 00:00 (50/875): cairo-gobject-1.17.8-4.fc39.x86_64.rp 1.1 MB/s | 18 kB 00:00 (51/875): cdparanoia-libs-10.2-41.fc38.x86_64.r 1.7 MB/s | 54 kB 00:00 (52/875): byte-buddy-1.14.2-1.fc39.noarch.rpm 2.5 MB/s | 3.2 MB 00:01 (53/875): clang-resource-filesystem-16.0.5-3.fc 336 kB/s | 13 kB 00:00 (54/875): cliquer-libs-1.22-5.fc38.x86_64.rpm 1.6 MB/s | 38 kB 00:00 (55/875): boost-devel-1.81.0-1.fc39.x86_64.rpm 3.5 MB/s | 14 MB 00:04 (56/875): cmake-3.27.0~rc3-1.fc39.x86_64.rpm 4.2 MB/s | 8.0 MB 00:01 (57/875): cmake-filesystem-3.27.0~rc3-1.fc39.x8 903 kB/s | 18 kB 00:00 (58/875): cmake-rpm-macros-3.27.0~rc3-1.fc39.no 931 kB/s | 17 kB 00:00 (59/875): coin-or-Cbc-2.10.5-12.fc38.x86_64.rpm 4.5 MB/s | 833 kB 00:00 (60/875): cmake-data-3.27.0~rc3-1.fc39.noarch.r 5.8 MB/s | 2.2 MB 00:00 (61/875): coin-or-Cbc-devel-2.10.5-12.fc38.x86_ 3.1 MB/s | 122 kB 00:00 (62/875): coin-or-Cgl-devel-0.60.3-9.fc38.x86_6 4.1 MB/s | 70 kB 00:00 (63/875): coin-or-Cgl-0.60.3-9.fc38.x86_64.rpm 5.3 MB/s | 432 kB 00:00 (64/875): coin-or-Clp-devel-1.17.6-12.fc38.x86_ 3.2 MB/s | 143 kB 00:00 (65/875): coin-or-Clp-1.17.6-12.fc38.x86_64.rpm 5.3 MB/s | 938 kB 00:00 (66/875): coin-or-CoinUtils-2.11.4-9.fc38.x86_6 5.8 MB/s | 482 kB 00:00 (67/875): coin-or-CoinUtils-devel-2.11.4-9.fc38 4.1 MB/s | 145 kB 00:00 (68/875): coin-or-Osi-devel-0.108.6-8.fc38.x86_ 2.1 MB/s | 61 kB 00:00 (69/875): coin-or-Osi-0.108.6-8.fc38.x86_64.rpm 4.2 MB/s | 320 kB 00:00 (70/875): copy-jdk-configs-4.1-2.fc38.noarch.rp 679 kB/s | 28 kB 00:00 (71/875): coin-or-Sample-1.2.12-7.fc38.noarch.r 2.8 MB/s | 179 kB 00:00 (72/875): crypto-policies-scripts-20230614-1.gi 2.3 MB/s | 116 kB 00:00 (73/875): cups-libs-2.4.4-1.fc39.x86_64.rpm 4.7 MB/s | 268 kB 00:00 (74/875): dbus-libs-1.14.8-1.fc39.x86_64.rpm 4.3 MB/s | 156 kB 00:00 (75/875): dejavu-sans-fonts-2.37-20.fc38.noarch 5.0 MB/s | 1.3 MB 00:00 (76/875): desktop-file-utils-0.26-8.fc38.x86_64 4.0 MB/s | 71 kB 00:00 (77/875): dos2unix-7.5.0-1.fc39.x86_64.rpm 6.0 MB/s | 298 kB 00:00 (78/875): double-conversion-3.1.5-8.fc38.x86_64 2.8 MB/s | 49 kB 00:00 (79/875): clang-libs-16.0.5-3.fc39.x86_64.rpm 4.6 MB/s | 22 MB 00:04 (80/875): duktape-2.7.0-4.fc39.x86_64.rpm 2.9 MB/s | 170 kB 00:00 (81/875): eigen3-devel-3.4.0-10.fc39.noarch.rpm 4.1 MB/s | 1.2 MB 00:00 (82/875): emacs-filesystem-28.2-6.fc39.noarch.r 436 kB/s | 7.8 kB 00:00 (83/875): expat-2.5.0-2.fc38.x86_64.rpm 3.3 MB/s | 110 kB 00:00 (84/875): flexiblas-3.3.1-3.fc39.x86_64.rpm 1.2 MB/s | 33 kB 00:00 (85/875): doxygen-1.9.7-2.fc39.x86_64.rpm 3.2 MB/s | 5.0 MB 00:01 (86/875): flexiblas-openblas-openmp-3.3.1-3.fc3 1.0 MB/s | 17 kB 00:00 (87/875): fontconfig-2.14.2-3.fc39.x86_64.rpm 3.7 MB/s | 296 kB 00:00 (88/875): fonts-filesystem-2.0.5-11.fc38.noarch 509 kB/s | 8.1 kB 00:00 (89/875): freetype-2.13.0-1.fc39.x86_64.rpm 4.2 MB/s | 413 kB 00:00 (90/875): fribidi-1.0.13-1.fc39.x86_64.rpm 2.7 MB/s | 90 kB 00:00 (91/875): gc-8.2.2-3.fc38.x86_64.rpm 3.3 MB/s | 110 kB 00:00 (92/875): cpp-13.1.1-4.fc39.x86_64.rpm 4.2 MB/s | 11 MB 00:02 (93/875): flexiblas-netlib-3.3.1-3.fc39.x86_64. 4.9 MB/s | 3.1 MB 00:00 (94/875): gcc-gfortran-13.1.1-4.fc39.x86_64.rpm 5.6 MB/s | 12 MB 00:02 (95/875): gcc-plugin-annobin-13.1.1-4.fc39.x86_ 2.0 MB/s | 45 kB 00:00 (96/875): gd-2.3.3-11.fc39.x86_64.rpm 2.5 MB/s | 139 kB 00:00 (97/875): gdk-pixbuf2-2.42.10-2.fc38.x86_64.rpm 3.7 MB/s | 485 kB 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perl-File-Slurper-0.014-2.fc38.noarch 352/875 Verifying : perl-File-Temp-1:0.231.100-490.fc38.noarch 353/875 Verifying : perl-File-stat-1.12-497.fc39.noarch 354/875 Verifying : perl-FileHandle-2.03-497.fc39.noarch 355/875 Verifying : perl-Filter-2:1.64-2.fc38.x86_64 356/875 Verifying : perl-GSSAPI-0.28-41.fc38.x86_64 357/875 Verifying : perl-Getopt-Long-1:2.54-2.fc38.noarch 358/875 Verifying : perl-Getopt-Std-1.13-497.fc39.noarch 359/875 Verifying : perl-HTML-Parser-3.81-1.fc38.x86_64 360/875 Verifying : perl-HTML-Tagset-3.20-53.fc38.noarch 361/875 Verifying : perl-HTTP-Cookies-6.10-9.fc38.noarch 362/875 Verifying : perl-HTTP-Date-6.05-12.fc38.noarch 363/875 Verifying : perl-HTTP-Message-6.44-2.fc38.noarch 364/875 Verifying : perl-HTTP-Negotiate-6.01-35.fc38.noarch 365/875 Verifying : perl-HTTP-Tiny-0.084-1.fc39.noarch 366/875 Verifying : perl-Hash-Util-FieldHash-1.26-497.fc39.x86_64 367/875 Verifying : perl-I18N-LangTags-0.45-497.fc39.noarch 368/875 Verifying : perl-I18N-Langinfo-0.21-497.fc39.x86_64 369/875 Verifying : perl-IO-1.50-497.fc39.x86_64 370/875 Verifying : perl-IO-Compress-2.204-1.fc39.noarch 371/875 Verifying : perl-IO-HTML-1.004-10.fc38.noarch 372/875 Verifying : perl-IO-Socket-IP-0.41-493.fc39.noarch 373/875 Verifying : perl-IO-Socket-SSL-2.083-1.fc39.noarch 374/875 Verifying : perl-IO-String-1.08-47.fc38.noarch 375/875 Verifying : perl-IPC-Cmd-2:1.04-491.fc38.noarch 376/875 Verifying : perl-IPC-Open3-1.22-497.fc39.noarch 377/875 Verifying : perl-IPC-Run3-0.048-28.fc38.noarch 378/875 Verifying : perl-IPC-SysV-2.09-491.fc38.x86_64 379/875 Verifying : perl-IPC-System-Simple-1.30-10.fc39.noarch 380/875 Verifying : perl-JSON-4.10-2.fc38.noarch 381/875 Verifying : perl-LDAP-1:0.68-10.fc38.noarch 382/875 Verifying : perl-LWP-MediaTypes-6.04-14.fc38.noarch 383/875 Verifying : perl-LWP-Protocol-https-6.10-9.fc38.noarch 384/875 Verifying : perl-Lingua-Translit-0.29-3.fc38.noarch 385/875 Verifying : perl-List-AllUtils-0.19-9.fc38.noarch 386/875 Verifying : perl-List-SomeUtils-0.59-2.fc38.noarch 387/875 Verifying : perl-List-UtilsBy-0.12-6.fc38.noarch 388/875 Verifying : perl-Locale-Maketext-1.33-1.fc39.noarch 389/875 Verifying : perl-Locale-Maketext-Simple-1:0.21-497.fc39.noar 390/875 Verifying : perl-Log-Dispatch-2.71-1.fc39.noarch 391/875 Verifying : perl-Log-Dispatch-FileRotate-1.38-6.fc39.noarch 392/875 Verifying : perl-Log-Log4perl-1.57-2.fc38.noarch 393/875 Verifying : perl-MIME-Base64-3.16-490.fc38.x86_64 394/875 Verifying : perl-MIME-Charset-1.013.1-2.fc38.noarch 395/875 Verifying : perl-MIME-Lite-3.033-7.fc39.noarch 396/875 Verifying : perl-MIME-Types-2.24-2.fc38.noarch 397/875 Verifying : perl-MRO-Compat-0.15-6.fc39.noarch 398/875 Verifying : perl-Mail-Sender-1:0.903-20.fc38.noarch 399/875 Verifying : perl-Mail-Sendmail-0.80-17.fc38.noarch 400/875 Verifying : perl-MailTools-2.21-13.fc39.noarch 401/875 Verifying : perl-Math-BigInt-1:1.9998.38-1.fc39.noarch 402/875 Verifying : perl-Math-BigRat-0.2624-3.fc38.noarch 403/875 Verifying : perl-Math-Complex-1.59-497.fc39.noarch 404/875 Verifying : perl-Module-CoreList-1:5.20230423-1.fc39.noarch 405/875 Verifying : perl-Module-Implementation-0.09-36.fc39.noarch 406/875 Verifying : perl-Module-Load-1:0.36-490.fc38.noarch 407/875 Verifying : perl-Module-Load-Conditional-0.74-490.fc38.noarc 408/875 Verifying : perl-Module-Metadata-1.000038-1.fc39.noarch 409/875 Verifying : perl-Module-Runtime-0.016-19.fc38.noarch 410/875 Verifying : perl-Mozilla-CA-20221114-2.fc38.noarch 411/875 Verifying : perl-NTLM-1.09-35.fc39.noarch 412/875 Verifying : perl-Net-HTTP-6.23-1.fc39.noarch 413/875 Verifying : perl-Net-SMTP-SSL-1.04-20.fc38.noarch 414/875 Verifying : perl-Net-SSLeay-1.92-7.fc39.x86_64 415/875 Verifying : perl-Number-Compare-0.03-35.fc38.noarch 416/875 Verifying : perl-Opcode-1.57-497.fc39.x86_64 417/875 Verifying : perl-POSIX-2.03-497.fc39.x86_64 418/875 Verifying : perl-Package-Generator-1.106-28.fc39.noarch 419/875 Verifying : perl-Package-Stash-0.40-4.fc39.noarch 420/875 Verifying : perl-Package-Stash-XS-0.30-3.fc39.x86_64 421/875 Verifying : perl-PadWalker-2.5-8.fc39.x86_64 422/875 Verifying : perl-Params-Check-1:0.38-491.fc39.noarch 423/875 Verifying : perl-Params-Classify-0.015-18.fc39.x86_64 424/875 Verifying : perl-Params-Util-1.102-10.fc38.x86_64 425/875 Verifying : perl-Params-Validate-1.31-3.fc38.x86_64 426/875 Verifying : perl-Params-ValidationCompiler-0.31-2.fc38.noarc 427/875 Verifying : perl-Parse-RecDescent-1.967015-19.fc38.noarch 428/875 Verifying : perl-PathTools-3.89-1.fc39.x86_64 429/875 Verifying : perl-Pod-Escapes-1:1.07-490.fc38.noarch 430/875 Verifying : perl-Pod-Html-1.33-497.fc39.noarch 431/875 Verifying : perl-Pod-Perldoc-3.28.01-491.fc38.noarch 432/875 Verifying : perl-Pod-Simple-1:3.45-2.fc39.noarch 433/875 Verifying : perl-Pod-Usage-4:2.03-4.fc38.noarch 434/875 Verifying : perl-Ref-Util-0.204-17.fc39.noarch 435/875 Verifying : perl-Ref-Util-XS-0.117-18.fc39.x86_64 436/875 Verifying : perl-Regexp-Common-2017060201-21.fc38.noarch 437/875 Verifying : perl-Role-Tiny-2.002004-8.fc39.noarch 438/875 Verifying : perl-Safe-2.43-497.fc39.noarch 439/875 Verifying : perl-Scalar-List-Utils-5:1.63-491.fc39.x86_64 440/875 Verifying : perl-SelectSaver-1.02-497.fc39.noarch 441/875 Verifying : perl-Socket-4:2.037-1.fc39.x86_64 442/875 Verifying : perl-Sort-Key-1.33-26.fc38.x86_64 443/875 Verifying : perl-Specio-0.48-3.fc38.noarch 444/875 Verifying : perl-Storable-1:3.32-1.fc39.x86_64 445/875 Verifying : perl-Sub-Exporter-0.989-2.fc38.noarch 446/875 Verifying : perl-Sub-Exporter-Progressive-0.001013-21.fc39.n 447/875 Verifying : perl-Sub-Identify-0.14-22.fc39.x86_64 448/875 Verifying : perl-Sub-Install-0.929-2.fc38.noarch 449/875 Verifying : perl-Symbol-1.09-497.fc39.noarch 450/875 Verifying : perl-Sys-Hostname-1.24-497.fc39.x86_64 451/875 Verifying : perl-Sys-Syslog-0.36-491.fc38.x86_64 452/875 Verifying : perl-Term-ANSIColor-5.01-491.fc38.noarch 453/875 Verifying : perl-Term-Cap-1.18-1.fc39.noarch 454/875 Verifying : perl-Text-Balanced-2.06-4.fc39.noarch 455/875 Verifying : perl-Text-BibTeX-0.89-1.fc38.x86_64 456/875 Verifying : perl-Text-CSV-2.02-2.fc38.noarch 457/875 Verifying : perl-Text-Glob-0.11-20.fc38.noarch 458/875 Verifying : perl-Text-ParseWords-3.31-490.fc38.noarch 459/875 Verifying : perl-Text-Roman-3.5-24.fc38.noarch 460/875 Verifying : perl-Text-Soundex-3.05-25.fc38.x86_64 461/875 Verifying : perl-Text-Tabs+Wrap-2023.0511-1.fc39.noarch 462/875 Verifying : perl-Text-Unidecode-1.30-21.fc39.noarch 463/875 Verifying : perl-Thread-Queue-3.14-490.fc38.noarch 464/875 Verifying : perl-Tie-4.6-497.fc39.noarch 465/875 Verifying : perl-Tie-Cycle-1.227-8.fc38.noarch 466/875 Verifying : perl-Tie-RefHash-1.40-490.fc38.noarch 467/875 Verifying : perl-Time-HiRes-4:1.9775-1.fc39.x86_64 468/875 Verifying : perl-Time-Local-2:1.350-1.fc39.noarch 469/875 Verifying : perl-TimeDate-1:2.33-10.fc38.noarch 470/875 Verifying : perl-Try-Tiny-0.31-5.fc38.noarch 471/875 Verifying : perl-URI-5.19-1.fc39.noarch 472/875 Verifying : perl-Unicode-Collate-1.31-491.fc39.x86_64 473/875 Verifying : perl-Unicode-LineBreak-2019.001-15.fc38.x86_64 474/875 Verifying : perl-Unicode-Normalize-1.32-1.fc39.x86_64 475/875 Verifying : perl-Unicode-UCD-0.78-497.fc39.noarch 476/875 Verifying : perl-Variable-Magic-0.63-2.fc38.x86_64 477/875 Verifying : perl-WWW-RobotRules-6.02-36.fc38.noarch 478/875 Verifying : perl-XML-LibXML-1:2.0208-2.fc38.x86_64 479/875 Verifying : perl-XML-LibXML-Simple-1.01-11.fc38.noarch 480/875 Verifying : perl-XML-LibXSLT-2.002.001-1.fc39.x86_64 481/875 Verifying : perl-XML-NamespaceSupport-1.12-19.fc38.noarch 482/875 Verifying : perl-XML-Parser-2.46-13.fc38.x86_64 483/875 Verifying : perl-XML-SAX-1.02-12.fc38.noarch 484/875 Verifying : perl-XML-SAX-Base-1.09-19.fc38.noarch 485/875 Verifying : perl-XML-Writer-0.900-11.fc39.noarch 486/875 Verifying : perl-XML-XPath-1.48-3.fc38.noarch 487/875 Verifying : perl-XString-0.005-8.fc39.x86_64 488/875 Verifying : perl-autodie-2.36-1.fc38.noarch 489/875 Verifying : perl-autovivification-0.18-18.fc39.x86_64 490/875 Verifying : perl-base-2.27-497.fc39.noarch 491/875 Verifying : perl-constant-1.33-492.fc39.noarch 492/875 Verifying : perl-deprecate-0.04-497.fc39.noarch 493/875 Verifying : perl-encoding-4:3.00-493.fc38.x86_64 494/875 Verifying : perl-if-0.61.000-497.fc39.noarch 495/875 Verifying : perl-interpreter-4:5.36.1-497.fc39.x86_64 496/875 Verifying : perl-libnet-3.15-1.fc39.noarch 497/875 Verifying : perl-libs-4:5.36.1-497.fc39.x86_64 498/875 Verifying : perl-libwww-perl-6.71-1.fc39.noarch 499/875 Verifying : perl-locale-1.10-497.fc39.noarch 500/875 Verifying : perl-meta-notation-5.36.1-497.fc39.noarch 501/875 Verifying : perl-mro-1.26-497.fc39.x86_64 502/875 Verifying : perl-namespace-autoclean-0.29-15.fc39.noarch 503/875 Verifying : perl-namespace-clean-0.27-23.fc39.noarch 504/875 Verifying : perl-open-1.13-497.fc39.noarch 505/875 Verifying : perl-overload-1.35-497.fc39.noarch 506/875 Verifying : perl-overloading-0.02-497.fc39.noarch 507/875 Verifying : perl-parent-1:0.241-1.fc39.noarch 508/875 Verifying : perl-podlators-1:5.01-2.fc38.noarch 509/875 Verifying : perl-sigtrap-1.10-497.fc39.noarch 510/875 Verifying : perl-subs-1.04-497.fc39.noarch 511/875 Verifying : perl-threads-1:2.27-490.fc38.x86_64 512/875 Verifying : perl-threads-shared-1.68-1.fc39.x86_64 513/875 Verifying : perl-vars-1.05-497.fc39.noarch 514/875 Verifying : perl-version-8:0.99.29-491.fc38.x86_64 515/875 Verifying : perltidy-20230309-1.fc39.noarch 516/875 Verifying : pixman-0.42.2-1.fc39.x86_64 517/875 Verifying : poppler-23.02.0-1.fc38.x86_64 518/875 Verifying : poppler-data-0.4.11-4.fc38.noarch 519/875 Verifying : poppler-glib-23.02.0-1.fc38.x86_64 520/875 Verifying : procps-ng-4.0.3-1.fc39.x86_64 521/875 Verifying : python-pip-wheel-23.1.2-1.fc39.noarch 522/875 Verifying : python-setuptools-wheel-67.7.2-2.fc39.noarch 523/875 Verifying : python3-3.11.4-1.fc39.x86_64 524/875 Verifying : python3-libs-3.11.4-1.fc39.x86_64 525/875 Verifying : python3-numpy-1:1.24.3-1.fc39.x86_64 526/875 Verifying : qt-settings-38.2-2.fc39.noarch 527/875 Verifying : qt5-qtbase-5.15.10-1.fc39.x86_64 528/875 Verifying : qt5-qtbase-common-5.15.10-1.fc39.noarch 529/875 Verifying : qt5-qtbase-devel-5.15.10-1.fc39.x86_64 530/875 Verifying : qt5-qtbase-gui-5.15.10-1.fc39.x86_64 531/875 Verifying : qt5-qtdeclarative-5.15.10-1.fc39.x86_64 532/875 Verifying : qt5-qtdeclarative-devel-5.15.10-1.fc39.x86_64 533/875 Verifying : qt5-qtlocation-5.15.10-1.fc39.x86_64 534/875 Verifying : qt5-qtlocation-devel-5.15.10-1.fc39.x86_64 535/875 Verifying : qt5-qtsensors-5.15.10-1.fc39.x86_64 536/875 Verifying : qt5-qtsvg-5.15.10-1.fc39.x86_64 537/875 Verifying : qt5-qtsvg-devel-5.15.10-1.fc39.x86_64 538/875 Verifying : qt5-qttools-common-5.15.10-1.fc39.noarch 539/875 Verifying : qt5-qttools-libs-designer-5.15.10-1.fc39.x86_64 540/875 Verifying : qt5-qtwebchannel-5.15.10-1.fc39.x86_64 541/875 Verifying : qt5-qtwebchannel-devel-5.15.10-1.fc39.x86_64 542/875 Verifying : qt5-qtwebengine-5.15.12-6.fc39.x86_64 543/875 Verifying : qt5-qtwebengine-devel-5.15.12-6.fc39.x86_64 544/875 Verifying : qt5-qtwebengine-devtools-5.15.12-6.fc39.x86_64 545/875 Verifying : qt5-qtwebkit-5.212.0-0.76alpha4.fc39.x86_64 546/875 Verifying : qt5-qtwebkit-devel-5.212.0-0.76alpha4.fc39.x86_6 547/875 Verifying : qt5-qtx11extras-5.15.10-1.fc39.x86_64 548/875 Verifying : qt5-qtx11extras-devel-5.15.10-1.fc39.x86_64 549/875 Verifying : qt5-rpm-macros-5.15.10-1.fc39.noarch 550/875 Verifying : rav1e-libs-0.5.1-9.fc39.x86_64 551/875 Verifying : re2-1:20220601-2.fc38.x86_64 552/875 Verifying : readline-devel-8.2-3.fc38.x86_64 553/875 Verifying : rhash-1.4.3-2.fc38.x86_64 554/875 Verifying : scotch-7.0.3-2.fc39.x86_64 555/875 Verifying : scotch-devel-7.0.3-2.fc39.x86_64 556/875 Verifying : shared-mime-info-2.2-3.fc38.x86_64 557/875 Verifying : snappy-1.1.10-2.fc39.x86_64 558/875 Verifying : sombok-2.4.0-18.fc38.x86_64 559/875 Verifying : sqlite-3.41.2-3.fc39.x86_64 560/875 Verifying : sqlite-devel-3.41.2-3.fc39.x86_64 561/875 Verifying : suitesparse-5.13.0-2.fc38.x86_64 562/875 Verifying : svt-av1-libs-1.4.1-2.fc38.x86_64 563/875 Verifying : tcl-1:8.6.12-4.fc39.x86_64 564/875 Verifying : teckit-2.5.11-1.fc39.x86_64 565/875 Verifying : texlive-11:2023-69.fc39.noarch 566/875 Verifying : texlive-a4wide-11:svn20943.0-69.fc39.noarch 567/875 Verifying : texlive-ae-11:svn15878.1.4-69.fc39.noarch 568/875 Verifying : texlive-algorithms-11:svn42428-69.fc39.noarch 569/875 Verifying : texlive-alphalph-11:svn53087-69.fc39.noarch 570/875 Verifying : texlive-amscls-11:svn55378-69.fc39.noarch 571/875 Verifying : texlive-amsfonts-11:svn61937-69.fc39.noarch 572/875 Verifying : texlive-amsmath-11:svn63514-69.fc39.noarch 573/875 Verifying : texlive-anysize-11:svn15878.0-69.fc39.noarch 574/875 Verifying : texlive-atbegshi-11:svn53051-69.fc39.noarch 575/875 Verifying : texlive-attachfile-11:svn42099-69.fc39.noarch 576/875 Verifying : texlive-attachfile2-11:svn57959-75.fc39.noarch 577/875 Verifying : texlive-atveryend-11:svn53108-69.fc39.noarch 578/875 Verifying : texlive-auto-pst-pdf-11:svn56596-69.fc39.noarch 579/875 Verifying : texlive-auxhook-11:svn53173-69.fc39.noarch 580/875 Verifying : texlive-avantgar-11:svn61983-69.fc39.noarch 581/875 Verifying : texlive-babel-english-11:svn44495-69.fc39.noarch 582/875 Verifying : texlive-babel-11:svn65823-69.fc39.noarch 583/875 Verifying : texlive-babelbib-11:svn57349-69.fc39.noarch 584/875 Verifying : texlive-base-11:20230311-75.fc39.x86_64 585/875 Verifying : texlive-beamer-11:svn65984-69.fc39.noarch 586/875 Verifying : texlive-bera-11:svn20031.0-69.fc39.noarch 587/875 Verifying : texlive-beton-11:svn15878.0-69.fc39.noarch 588/875 Verifying : texlive-biblatex-11:svn66403-69.fc39.noarch 589/875 Verifying : 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xerces-c-3.2.3-8.fc38.x86_64 863/875 Verifying : xerces-c-devel-3.2.3-8.fc38.x86_64 864/875 Verifying : xkbcomp-1.4.6-5.fc38.x86_64 865/875 Verifying : xkeyboard-config-2.39-1.fc39.noarch 866/875 Verifying : xml-common-0.6.3-60.fc38.noarch 867/875 Verifying : xorg-x11-fonts-ISO8859-1-100dpi-7.5-35.fc38.noar 868/875 Verifying : xorg-x11-proto-devel-2023.2-1.fc39.noarch 869/875 Verifying : xorg-x11-server-Xvfb-1.20.14-23.fc39.x86_64 870/875 Verifying : xorg-x11-server-common-1.20.14-23.fc39.x86_64 871/875 Verifying : xorg-x11-xauth-1:1.1.2-3.fc38.x86_64 872/875 Verifying : xpdf-libs-1:4.04-9.fc39.x86_64 873/875 Verifying : zlib-devel-1.2.13-3.fc38.x86_64 874/875 Verifying : zziplib-0.13.72-3.fc38.x86_64 875/875 Installed: Lmod-8.7.25-1.fc39.x86_64 MUMPS-5.5.1-4.fc39.x86_64 MUMPS-common-5.5.1-4.fc39.noarch adobe-mappings-cmap-20230118-1.fc38.noarch adobe-mappings-cmap-deprecated-20230118-1.fc38.noarch adobe-mappings-pdf-20190401-3.fc38.noarch alsa-lib-1.2.9-3.fc39.x86_64 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texlive-euenc-11:svn19795.0.1h-69.fc39.noarch texlive-euler-11:svn42428-69.fc39.noarch texlive-everysel-11:svn57489-69.fc39.noarch texlive-everyshi-11:svn57001-69.fc39.noarch texlive-extsizes-11:svn17263.1.4a-69.fc39.noarch texlive-fancybox-11:svn18304.1.4-69.fc39.noarch texlive-fancyhdr-11:svn64977-69.fc39.noarch texlive-fancyref-11:svn15878.0.9c-69.fc39.noarch texlive-fancyvrb-11:svn65585-69.fc39.noarch texlive-filecontents-11:svn52142-69.fc39.noarch texlive-filehook-11:svn64822-69.fc39.noarch texlive-finstrut-11:svn21719.0.5-69.fc39.noarch texlive-firstaid-11:svn64892-69.fc39.noarch texlive-fix2col-11:svn38770-69.fc39.noarch texlive-float-11:svn15878.1.3d-69.fc39.noarch texlive-fontspec-11:svn63386-69.fc39.noarch texlive-footmisc-11:svn62524-69.fc39.noarch texlive-footnotehyper-11:svn60374-69.fc39.noarch texlive-fp-11:svn49719-69.fc39.noarch texlive-fpl-11:svn54512-69.fc39.noarch texlive-geometry-11:svn61719-69.fc39.noarch texlive-gettitlestring-11:svn53170-69.fc39.noarch texlive-glyphlist-11:svn54074-75.fc39.noarch texlive-graphics-11:svn66204-69.fc39.noarch texlive-graphics-cfg-11:svn41448-69.fc39.noarch texlive-graphics-def-11:svn64487-69.fc39.noarch texlive-grfext-11:svn53024-69.fc39.noarch texlive-grffile-11:svn52756-69.fc39.noarch texlive-gsftopk-11:svn52851-75.fc39.x86_64 texlive-helvetic-11:svn61719-69.fc39.noarch texlive-hobsub-11:svn52810-69.fc39.noarch texlive-hologo-11:svn61719-69.fc39.noarch texlive-hopatch-11:svn65491-69.fc39.noarch texlive-hycolor-11:svn53584-69.fc39.noarch texlive-hypdoc-11:svn65678-69.fc39.noarch texlive-hyperref-11:svn65758-69.fc39.noarch texlive-hyph-utf8-11:svn61719-69.fc39.noarch texlive-hyphen-base-11:svn66413-69.fc39.noarch texlive-hyphenex-11:svn57387-69.fc39.noarch texlive-ifmtarg-11:svn47544-69.fc39.noarch texlive-ifplatform-11:svn45533-69.fc39.noarch texlive-iftex-11:svn61910-69.fc39.noarch texlive-index-11:svn24099.4.1beta-69.fc39.noarch texlive-infwarerr-11:svn53023-69.fc39.noarch texlive-intcalc-11:svn53168-69.fc39.noarch texlive-jknapltx-11:svn19440.0-69.fc39.noarch texlive-kastrup-11:svn15878.0-69.fc39.noarch texlive-knuth-lib-11:svn57963-69.fc39.noarch texlive-knuth-local-11:svn57963-69.fc39.noarch texlive-koma-script-11:svn64685-69.fc39.noarch texlive-kpathsea-11:svn66209-75.fc39.x86_64 texlive-kvdefinekeys-11:svn53193-69.fc39.noarch texlive-kvoptions-11:svn63622-69.fc39.noarch texlive-kvsetkeys-11:svn64632-69.fc39.noarch texlive-l3backend-11:svn65573-69.fc39.noarch texlive-l3experimental-11:svn65621-69.fc39.noarch texlive-l3kernel-11:svn66094-69.fc39.noarch texlive-l3packages-11:svn65722-69.fc39.noarch texlive-latex-11:svn65161-75.fc39.noarch texlive-latex-fonts-11:svn28888.0-69.fc39.noarch texlive-latex-lab-11:svn64892-69.fc39.noarch texlive-latexbug-11:svn63596-69.fc39.noarch texlive-latexconfig-11:svn53525-69.fc39.noarch texlive-letltxmacro-11:svn53022-69.fc39.noarch texlive-lib-11:20230311-75.fc39.x86_64 texlive-lineno-11:svn65586-69.fc39.noarch texlive-listings-11:svn66222-69.fc39.noarch texlive-lm-11:svn65956-69.fc39.noarch texlive-lm-math-11:svn36915.1.959-69.fc39.noarch texlive-logreq-11:svn53003-69.fc39.noarch texlive-ltabptch-11:svn17533.1.74d-69.fc39.noarch texlive-ltxcmds-11:svn56421-69.fc39.noarch texlive-ltxmisc-11:svn21927.0-69.fc39.noarch texlive-lua-alt-getopt-11:svn56414-69.fc39.noarch texlive-lua-uni-algos-11:svn62204-69.fc39.noarch texlive-luabidi-11:svn54512-69.fc39.noarch texlive-luahbtex-11:svn66186-75.fc39.x86_64 texlive-lualatex-math-11:svn61464-69.fc39.noarch texlive-lualibs-11:svn64615-69.fc39.noarch texlive-luaotfload-11:svn64616-75.fc39.noarch texlive-luatex-11:svn66967-75.fc39.x86_64 texlive-luatexbase-11:svn52663-69.fc39.noarch texlive-lwarp-11:svn66259-75.fc39.noarch texlive-makecmds-11:svn15878.0-69.fc39.noarch texlive-makeindex-11:svn62517-75.fc39.x86_64 texlive-marginnote-11:svn48383-69.fc39.noarch texlive-marvosym-11:svn29349.2.2a-69.fc39.noarch texlive-mathpazo-11:svn52663-69.fc39.noarch texlive-mathspec-11:svn42773-69.fc39.noarch texlive-mathtools-11:svn63767-69.fc39.noarch texlive-mdwtools-11:svn15878.1.05.4-69.fc39.noarch texlive-memoir-11:svn65040-69.fc39.noarch texlive-metafont-11:svn66186-75.fc39.x86_64 texlive-metalogo-11:svn18611.0.12-69.fc39.noarch texlive-mflogo-11:svn42428-69.fc39.noarch texlive-mfnfss-11:svn46036-69.fc39.noarch texlive-mfware-11:svn66186-75.fc39.x86_64 texlive-microtype-11:svn66587-69.fc39.noarch texlive-minitoc-11:svn61719-69.fc39.noarch texlive-mnsymbol-11:svn18651.1.4-69.fc39.noarch texlive-modes-11:svn61719-69.fc39.noarch texlive-mparhack-11:svn59066-69.fc39.noarch texlive-mptopdf-11:svn65952-75.fc39.noarch texlive-ms-11:svn57473-69.fc39.noarch texlive-multido-11:svn18302.1.42-69.fc39.noarch texlive-natbib-11:svn20668.8.31b-69.fc39.noarch texlive-newfloat-11:svn52906-69.fc39.noarch texlive-notoccite-11:svn18129.0-69.fc39.noarch texlive-ntgclass-11:svn65522-69.fc39.noarch texlive-oberdiek-11:svn65521-75.fc39.noarch texlive-pagesel-11:svn56105-69.fc39.noarch texlive-palatino-11:svn61719-69.fc39.noarch texlive-paralist-11:svn43021-69.fc39.noarch texlive-parallel-11:svn15878.0-69.fc39.noarch texlive-parskip-11:svn58358-69.fc39.noarch texlive-pdfcol-11:svn64469-69.fc39.noarch texlive-pdfcolfoot-11:svn65512-69.fc39.noarch texlive-pdfcolmk-11:svn52912-69.fc39.noarch texlive-pdfescape-11:svn53082-69.fc39.noarch texlive-pdflscape-11:svn64851-69.fc39.noarch texlive-pdfmanagement-testphase-11:svn66532-69.fc39.noarch texlive-pdfpages-11:svn65319-69.fc39.noarch texlive-pdftex-11:svn66243-75.fc39.x86_64 texlive-pdftexcmds-11:svn55777-69.fc39.noarch texlive-pgf-11:svn65553-69.fc39.noarch texlive-picture-11:svn54867-69.fc39.noarch texlive-placeins-11:svn19848.2.2-69.fc39.noarch texlive-plain-11:svn57963-69.fc39.noarch texlive-polyglossia-11:svn65792-69.fc39.noarch texlive-psfrag-11:svn15878.3.04-69.fc39.noarch texlive-pslatex-11:svn57434-69.fc39.noarch texlive-psnfss-11:svn54694-69.fc39.noarch texlive-pspicture-11:svn15878.0-69.fc39.noarch texlive-pst-3d-11:svn17257.1.10-69.fc39.noarch texlive-pst-coil-11:svn62977-69.fc39.noarch texlive-pst-eps-11:svn15878.1.0-69.fc39.noarch texlive-pst-fill-11:svn60671-69.fc39.noarch texlive-pst-grad-11:svn15878.1.06-69.fc39.noarch texlive-pst-math-11:svn64732-69.fc39.noarch texlive-pst-node-11:svn61838-69.fc39.noarch texlive-pst-ovl-11:svn54963-69.fc39.noarch texlive-pst-plot-11:svn65346-69.fc39.noarch texlive-pst-text-11:svn49542-69.fc39.noarch texlive-pst-tools-11:svn60621-69.fc39.noarch texlive-pst-tree-11:svn60421-69.fc39.noarch texlive-pstricks-11:svn65346-69.fc39.noarch texlive-pstricks-add-11:svn65067-69.fc39.noarch texlive-ragged2e-11:svn66152-69.fc39.noarch texlive-rcs-11:svn15878.0-69.fc39.noarch texlive-realscripts-11:svn56594-69.fc39.noarch texlive-refcount-11:svn53164-69.fc39.noarch texlive-rerunfilecheck-11:svn63869-69.fc39.noarch texlive-rsfs-11:svn15878.0-69.fc39.noarch texlive-sansmath-11:svn17997.1.1-69.fc39.noarch texlive-sansmathaccent-11:svn53628-69.fc39.noarch texlive-sauerj-11:svn15878.0-69.fc39.noarch texlive-scheme-basic-11:svn54191-69.fc39.noarch texlive-section-11:svn20180.0-69.fc39.noarch texlive-seminar-11:svn59801-69.fc39.noarch texlive-sepnum-11:svn20186.2.0-69.fc39.noarch texlive-setspace-11:svn65206-69.fc39.noarch texlive-showexpl-11:svn57414-69.fc39.noarch texlive-stringenc-11:svn52982-69.fc39.noarch texlive-subfig-11:svn15878.1.3-69.fc39.noarch texlive-symbol-11:svn61719-69.fc39.noarch texlive-tex-11:svn66186-75.fc39.x86_64 texlive-tex-ini-files-11:svn40533-69.fc39.noarch texlive-texlive-common-doc-11:svn54176-69.fc39.noarch texlive-texlive-en-11:svn66572-75.fc39.noarch texlive-texlive-msg-translations-11:svn66593-69.fc39.noarch texlive-texlive-scripts-11:svn66584-75.fc39.noarch texlive-texlive.infra-11:svn66512-75.fc39.noarch texlive-textcase-11:svn63868-69.fc39.noarch texlive-thumbpdf-11:svn62518-75.fc39.noarch texlive-times-11:svn61719-69.fc39.noarch texlive-tipa-11:svn29349.1.3-69.fc39.noarch texlive-titlesec-11:svn59845-69.fc39.noarch texlive-tools-11:svn64892-69.fc39.noarch texlive-translator-11:svn59412-69.fc39.noarch texlive-transparent-11:svn64852-69.fc39.noarch texlive-typehtml-11:svn17134.0-69.fc39.noarch texlive-ucharcat-11:svn38907-69.fc39.noarch texlive-ucs-11:svn64114-69.fc39.noarch texlive-underscore-11:svn18261.0-69.fc39.noarch texlive-unicode-data-11:svn64423-69.fc39.noarch texlive-unicode-math-11:svn61719-69.fc39.noarch texlive-uniquecounter-11:svn53162-69.fc39.noarch texlive-url-11:svn32528.3.4-69.fc39.noarch texlive-utopia-11:svn15878.0-69.fc39.noarch texlive-varwidth-11:svn24104.0.92-69.fc39.noarch texlive-xcolor-11:svn63563-69.fc39.noarch texlive-xdvi-11:svn62387-75.fc39.x86_64 texlive-xetex-11:svn66203-75.fc39.x86_64 texlive-xetexconfig-11:svn45845-69.fc39.noarch texlive-xifthen-11:svn38929-69.fc39.noarch texlive-xkeyval-11:svn63616-69.fc39.noarch texlive-xltxtra-11:svn56594-69.fc39.noarch texlive-xpatch-11:svn54563-69.fc39.noarch texlive-xstring-11:svn65551-69.fc39.noarch texlive-xtab-11:svn23347.2.3f-69.fc39.noarch texlive-xunicode-11:svn30466.0.981-69.fc39.noarch texlive-zapfding-11:svn61719-69.fc39.noarch texlive-zref-11:svn62977-69.fc39.noarch tokyocabinet-1.4.48-22.fc39.x86_64 tzdata-java-2023c-1.fc39.noarch unixODBC-2.3.11-3.fc39.x86_64 urw-base35-bookman-fonts-20200910-16.fc38.noarch urw-base35-c059-fonts-20200910-16.fc38.noarch urw-base35-d050000l-fonts-20200910-16.fc38.noarch urw-base35-fonts-20200910-16.fc38.noarch urw-base35-fonts-common-20200910-16.fc38.noarch urw-base35-gothic-fonts-20200910-16.fc38.noarch urw-base35-nimbus-mono-ps-fonts-20200910-16.fc38.noarch urw-base35-nimbus-roman-fonts-20200910-16.fc38.noarch urw-base35-nimbus-sans-fonts-20200910-16.fc38.noarch urw-base35-p052-fonts-20200910-16.fc38.noarch urw-base35-standard-symbols-ps-fonts-20200910-16.fc38.noarch urw-base35-z003-fonts-20200910-16.fc38.noarch vim-filesystem-2:9.0.1649-1.fc39.noarch vulkan-headers-1.3.250.0-1.fc39.noarch vulkan-loader-1.3.250.0-1.fc39.x86_64 vulkan-loader-devel-1.3.250.0-1.fc39.x86_64 wildmagic5-5.17-15.fc38.x86_64 wildmagic5-devel-5.17-15.fc38.x86_64 woff2-1.0.2-17.fc38.x86_64 xapian-core-libs-1.4.22-1.fc39.x86_64 xcb-util-0.4.1-2.fc38.x86_64 xcb-util-image-0.4.1-2.fc38.x86_64 xcb-util-keysyms-0.4.1-2.fc38.x86_64 xcb-util-renderutil-0.3.10-2.fc38.x86_64 xcb-util-wm-0.4.2-2.fc38.x86_64 xerces-c-3.2.3-8.fc38.x86_64 xerces-c-devel-3.2.3-8.fc38.x86_64 xkbcomp-1.4.6-5.fc38.x86_64 xkeyboard-config-2.39-1.fc39.noarch xml-common-0.6.3-60.fc38.noarch xorg-x11-fonts-ISO8859-1-100dpi-7.5-35.fc38.noarch xorg-x11-proto-devel-2023.2-1.fc39.noarch xorg-x11-server-Xvfb-1.20.14-23.fc39.x86_64 xorg-x11-server-common-1.20.14-23.fc39.x86_64 xorg-x11-xauth-1:1.1.2-3.fc38.x86_64 xpdf-libs-1:4.04-9.fc39.x86_64 zlib-devel-1.2.13-3.fc38.x86_64 zziplib-0.13.72-3.fc38.x86_64 Complete! Finish: build setup for openms-2.8.0-0.5.fc39.src.rpm Start: rpmbuild openms-2.8.0-0.5.fc39.src.rpm warning: %patchN is deprecated (3 usages found), use %patch N (or %patch -P N) Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1675209600 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.USoUpF + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf OpenMS-2.8.0 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/OpenMS-2.8.0-src.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd OpenMS-2.8.0 + /usr/bin/mkdir -p SPECPARTS + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + rm -rf cmake/MacOSX + dos2unix share/OpenMS/SIMULATION/FASTAProteinAbundanceSampling.py dos2unix: converting file share/OpenMS/SIMULATION/FASTAProteinAbundanceSampling.py to Unix format... + echo 'Patch #0 (openms-remove_testflag.patch):' Patch #0 (openms-remove_testflag.patch): + /usr/bin/patch --no-backup-if-mismatch -f -p1 -b --suffix .backup --fuzz=0 patching file src/tests/class_tests/openms/CMakeLists.txt + echo 'Patch #1 (openms-bug5864.patch):' Patch #1 (openms-bug5864.patch): + /usr/bin/patch --no-backup-if-mismatch -f -p1 -b --suffix .backup --fuzz=0 patching file src/openms/source/QC/MQEvidenceExporter.cpp + echo 'Patch #2 (openms-fix_gcc13.patch):' Patch #2 (openms-fix_gcc13.patch): + /usr/bin/patch --no-backup-if-mismatch -f -p1 -b --suffix .backup --fuzz=0 patching file src/openms/source/FORMAT/ParamCTDFile.cpp + sed -e 's| ||g' -i share/OpenMS/DESKTOP/TOPPAS.appdata.xml share/OpenMS/DESKTOP/TOPPView.appdata.xml + find . -type f -name '*.h' -exec chmod 0644 '{}' ';' + find . -type f -name '*.cpp' -exec chmod 0644 '{}' ';' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.Qgmzez + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd OpenMS-2.8.0 + mkdir -p build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX ++ gcc -dumpversion + /usr/bin/cmake -S . -B redhat-linux-build -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_DO_STRIP:BOOL=OFF -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -Wno-dev -B build -S ./ -DCMAKE_CXX_COMPILER_VERSION:STRING=13 -DENABLE_UPDATE_CHECK:BOOL=OFF -DCMAKE_COLOR_MAKEFILE:BOOL=ON '-DCMAKE_CXX_FLAGS_RELEASE:STRING=-Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' '-DCMAKE_C_FLAGS_RELEASE:STRING=-Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' -DCMAKE_BUILD_TYPE=Release -DBoost_IOSTREAMS_LIBRARY_RELEASE:FILEPATH=/usr/lib64/libboost_iostreams.so -DBoost_MATH_C99_LIBRARY_RELEASE:FILEPATH=/usr/lib64/libboost_math_c99.so -DBoost_REGEX_LIBRARY_RELEASE:FILEPATH=/usr/lib64/libboost_regex.so -DXercesC_LIBRARY_RELEASE:FILEPATH=/usr/lib64/libxerces-c.so -DCMAKE_VERBOSE_MAKEFILE=TRUE -DCMAKE_PREFIX_PATH=/usr -DENABLE_SVN=OFF -DBOOST_USE_STATIC=OFF -DCMAKE_SKIP_RPATH:BOOL=NO -DCMAKE_SKIP_INSTALL_RPATH:BOOL=NO -DMT_ENABLE_OPENMP=ON -DENABLE_GCC_WERROR:BOOL=OFF -DPERCOLATOR_BINARY:FILEPATH=/usr/bin/percolator -DBOOST_USE_STATIC:BOOL=OFF -DBoost_INCLUDE_DIR:PATH=/usr/include -DENABLE_TUTORIALS:BOOL=OFF -DENABLE_UNITYBUILD:BOOL=OFF -DHAS_XSERVER:BOOL=OFF -DCMAKE_INSTALL_PREFIX=/usr -DINSTALL_BIN_DIR:PATH=bin -DINSTALL_CMAKE_DIR:PATH=lib64/cmake/OpenMS -DINSTALL_DOC_DIR:PATH=share/doc/openms-doc -DINSTALL_INCLUDE_DIR:PATH=include -DINSTALL_LIB_DIR:PATH=lib64/OpenMS -DINSTALL_SHARE_DIR:PATH=share/OpenMS -DPACKAGE_TYPE:STRING=none -DWITH_GUI:BOOL=ON -DXercesC_INCLUDE_DIRS:PATH=/usr/include/xercesc -DOPENMS_DISABLE_UPDATE_CHECK:BOOL=OFF -DENABLE_UPDATE_CHECK:BOOL=OFF -DGIT_TRACKING:BOOL=OFF -DOPENMS_64BIT_ARCHITECTURE:BOOL=ON -DBUILD_TESTING:BOOL=OFF -DBUILD_EXAMPLES:BOOL=OFF -DENABLE_TOPP_TESTING:BOOL=OFF -DENABLE_CLASS_TESTING:BOOL=OFF -DPYOPENMS=OFF -- The C compiler identification is GNU 13.1.1 -- The CXX compiler identification is GNU 13.1.1 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Building OpenMS 2.8.0 -- [CMake is not tracking Git commits and branching ('-D GIT_TRACKING=Off')] CMake Warning at cmake/setup_lib_find_paths.cmake:46 (message): Unless you are certain that you have all contributing libraries in system paths, please specify an explicit path to the built contrib libraries via -DOPENMS_CONTRIB_LIBS Call Stack (most recent call first): CMakeLists.txt:180 (include) -- OpenMP support requested: ON -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") found components: CXX -- Architecture: 64 bit -- Performing Test WITH_FPIC -- Performing Test WITH_FPIC - Success -- Compiler checks for conversion: OFF -- Found XercesC: /usr/lib64/libxerces-c.so (found version "3.2.3") -- Found Boost: /usr/include (found suitable version "1.81.0", minimum required is "1.48.0") found components: iostreams date_time math_c99 regex -- Found Boost version 1.81.0 -- Found LIBSVM: /usr/lib64/libsvm.so (found suitable version "3.3.1", minimum required is "2.91") -- Found COIN: /usr/include -- Found GLPK: /usr/lib64/libglpk.so -- Found ZLIB: /usr/lib64/libz.so (found version "1.2.13") -- Found BZip2: /usr/lib64/libbz2.so (found version "1.0.8") -- Looking for BZ2_bzCompressInit -- Looking for BZ2_bzCompressInit - found -- Found WM5: /usr/include/WildMagic -- Found SQLite3: /usr/include (found suitable version "3.41.2", minimum required is "3.15.0") -- Found HDF5: /usr/lib64/libhdf5.so;/usr/lib64/libhdf5_cpp.so;/usr/lib64/libhdf5.so (found version "1.12.1") found components: C CXX -- Found Qt 5.15.10 -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Found Boost: /usr/include (found suitable version "1.81.0", minimum required is "1.48.0") -- Adding library OpenSwathAlgo -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY - Success -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY - Success -- Performing Test COMPILER_HAS_DEPRECATED_ATTR -- Performing Test COMPILER_HAS_DEPRECATED_ATTR - Success -- Adding library OpenSwathAlgo - SUCCESS -- Info: CF_OPENMS_DATA_PATH: -- Info: CF_OPENMS_DOC_PATH: -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of unsigned char -- Check size of unsigned char - done -- Check size of unsigned short -- Check size of unsigned short - done -- Check size of unsigned int -- Check size of unsigned int - done -- Check size of unsigned long -- Check size of unsigned long - done -- Check size of unsigned long long -- Check size of unsigned long long - done -- Check size of short -- Check size of short - done -- Check size of int -- Check size of int - done -- Check size of long -- Check size of long - done -- Check size of long long -- Check size of long long - done -- Check size of int32_t -- Check size of int32_t - done -- Check size of int64_t -- Check size of int64_t - done -- Check size of uint8_t -- Check size of uint8_t - done -- Check size of uint32_t -- Check size of uint32_t - done -- Check size of uint64_t -- Check size of uint64_t - done -- Looking for C++ include unistd.h -- Looking for C++ include unistd.h - found -- Looking for C++ include process.h -- Looking for C++ include process.h - not found -- Looking for C++ include time.h -- Looking for C++ include time.h - found -- Looking for C++ include sys/types.h -- Looking for C++ include sys/types.h - found -- Looking for C++ include sys/times.h -- Looking for C++ include sys/times.h - found -- Looking for C++ include sys/time.h -- Looking for C++ include sys/time.h - found -- Looking for C++ include sys/resource.h -- Looking for C++ include sys/resource.h - found -- Looking for C++ include stdint.h -- Looking for C++ include stdint.h - found -- Looking for kill -- Looking for kill - found -- Looking for sysconf -- Looking for sysconf - found -- Adding library OpenMS -- Adding library OpenMS - SUCCESS -- Adding library OpenMS_GUI -- Adding library OpenMS_GUI - SUCCESS -- No resource file (/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.rc) found for INIFileEditor. No icon will be embedded. -- No resource file (/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/SwathWizard.rc) found for SwathWizard. No icon will be embedded. -- No resource file (/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.rc) found for TOPPAS. No icon will be embedded. -- No resource file (/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.rc) found for TOPPView. No icon will be embedded. -- Documentation is built (-D ENABLE_DOCS=On). -- Found Doxygen: /usr/bin/doxygen (found version "1.9.7") found components: doxygen dot -- Disabled tutorials (-D ENABLE_TUTORIALS=Off). -- -- ----------------------------------------------------------------- -- -- You have successfully configured OpenMS. -- -- For a full list of make targets execute: -- 'make targets' -- -- ----------------------------------------------------------------- -- -- Configuring done (5.5s) -- Generating done (0.5s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_C_FLAGS_RELEASE CMAKE_Fortran_FLAGS_RELEASE CMAKE_INSTALL_DO_STRIP ENABLE_SVN INCLUDE_INSTALL_DIR INSTALL_CMAKE_DIR LIB_INSTALL_DIR LIB_SUFFIX OPENMS_DISABLE_UPDATE_CHECK PERCOLATOR_BINARY SHARE_INSTALL_PREFIX SYSCONF_INSTALL_DIR -- Build files have been written to: /builddir/build/BUILD/OpenMS-2.8.0/build + /usr/bin/make -O -j2 V=1 VERBOSE=1 OpenMS TOPP UTILS GUI -C build make: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/cmake -S/builddir/build/BUILD/OpenMS-2.8.0 -B/builddir/build/BUILD/OpenMS-2.8.0/build --check-build-system CMakeFiles/Makefile.cmake 0 make: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f CMakeFiles/Makefile2 OpenMS make[1]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/cmake -S/builddir/build/BUILD/OpenMS-2.8.0 -B/builddir/build/BUILD/OpenMS-2.8.0/build --check-build-system CMakeFiles/Makefile.cmake 0 make[1]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[1]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/OpenMS-2.8.0/build/CMakeFiles 56 make[1]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f CMakeFiles/Makefile2 src/openms/CMakeFiles/OpenMS.dir/all /usr/bin/make -f src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build.make src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo /builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build.make src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 0%] Building CXX object src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/StatsHelpers.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -MD -MT src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/StatsHelpers.cpp.o -MF CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/StatsHelpers.cpp.o.d -o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/StatsHelpers.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/source/OPENSWATHALGO/ALGO/StatsHelpers.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 0%] Building CXX object src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/Scoring.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -MD -MT src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/Scoring.cpp.o -MF CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/Scoring.cpp.o.d -o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/Scoring.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/source/OPENSWATHALGO/ALGO/Scoring.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 0%] Building CXX object src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/DataFrameWriter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -MD -MT src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/DataFrameWriter.cpp.o -MF CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/DataFrameWriter.cpp.o.d -o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/DataFrameWriter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/source/OPENSWATHALGO/DATAACCESS/DataFrameWriter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 0%] Building CXX object src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -MD -MT src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.cpp.o -MF CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.cpp.o.d -o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/source/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 0%] Building CXX object src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/SpectrumHelpers.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function 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-I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -MD -MT src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/MockObjects.cpp.o -MF CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/MockObjects.cpp.o.d -o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/MockObjects.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/source/OPENSWATHALGO/DATAACCESS/MockObjects.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 0%] Building CXX object src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/Transitions.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong 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src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/TransitionHelper.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects 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'/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 0%] Linking CXX shared library ../../lib/libOpenSwathAlgo.so cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathAlgo.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,--dependency-file,CMakeFiles/OpenSwathAlgo.dir/link.d -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libOpenSwathAlgo.so -o ../../lib/libOpenSwathAlgo.so CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/Scoring.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/StatsHelpers.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/DataFrameWriter.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/MockObjects.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/SpectrumHelpers.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/TransitionHelper.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/Transitions.cpp.o -Wl,-rpath,::::::::::::::: make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 0%] Built target OpenSwathAlgo make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms/CMakeFiles/OpenMS_autogen.dir/build.make src/openms/CMakeFiles/OpenMS_autogen.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/openms /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms 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"SRC:/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringCID.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoIdentification.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoIonScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoPostScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/AScore.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/AccurateMassSearchEngine.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/BasicProteinInferenceAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmAverage.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmBest.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmPEPIons.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmPEPMatrix.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmRanks.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmWorst.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusMapMergerAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/FIAMSDataProcessor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/FIAMSScheduler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/FalseDiscoveryRate.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/HiddenMarkovModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/IDBoostGraph.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/IDConflictResolverAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/IDDecoyProbability.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/IDMapper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/IDMergerAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/IDRipper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/IDScoreGetterSetter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/IDScoreSwitcherAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/MessagePasserFactory.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/MetaboliteSpectralMatching.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/PeptideIndexing.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/PeptideProteinResolution.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/PercolatorFeatureSetHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/PrecursorPurity.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ProtonDistributionModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/SimpleSearchEngineAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/SiriusAdapterAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/SiriusMSConverter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmMedian.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmQuantile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmThreshold.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureDistance.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/LabeledPairFinder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmKD.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmPrecision.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmRecall.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/SimplePairFinder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/StablePairFinder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationDescription.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationModelBSpline.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationModelInterpolated.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationModelLinear.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationModelLowess.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MRM/MRMFragmentSelection.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ChromatogramExtractor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ChromatogramExtractorAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ConfidenceScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SimpleOpenMSSpectraAccessFactory.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMS.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSCached.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSInMemory.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessQuadMZTransforming.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessTransforming.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAPrescoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/IonMobilityScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMAssay.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMBatchFeatureSelector.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMDecoy.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeaturePicker.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureQC.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureSelector.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMIonSeries.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMRTNormalizer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MasstraceCorrelator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathOSWWriter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScores.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathTSVWriter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathWorkflow.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SpectrumAddition.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SwathMapMassCorrection.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SwathQC.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SwathWindowLoader.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TransitionPQPFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TransitionTSVFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/PIP/LocalLinearMap.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/PIP/PeakIntensityPredictor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/AbsoluteQuantitation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/AbsoluteQuantitationMethod.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricNormalizer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantifier.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantifierStatistics.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsotopeLabelingMDVs.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqConstants.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureNode.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ProteinInference.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ProteinResolver.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/RNPXL/HyperScore.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/RNPXL/MorpheusScore.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/RNPXL/PScore.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/RNPXL/RNPxlFragmentAnnotationHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/RNPXL/RNPxlMarkerIonExtractor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/RNPXL/RNPxlModificationsGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/RNPXL/RNPxlReport.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/SEQUENCE/NeedlemanWunsch.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/SVM/SVMWrapper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/SVM/SimpleSVM.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/IncludeExcludeTarget.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/InclusionExclusionList.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/MRMMapping.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/MetaboTargetedAssay.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/MetaboTargetedTargetDecoy.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSProteinInference.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelection.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperimentHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/XLMS/OpenPepXLAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/XLMS/XFDRAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/XLMS/XQuestScores.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/APPLICATIONS/ConsoleUtils.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/APPLICATIONS/INIUpdater.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/APPLICATIONS/MapAlignerBase.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/APPLICATIONS/OpenSwathBase.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/APPLICATIONS/ParameterInformation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/APPLICATIONS/SearchEngineBase.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/APPLICATIONS/ToolHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/AAIndex.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/AASequence.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/AdductInfo.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/CrossLinksDB.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/DecoyGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/DigestionEnzyme.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/DigestionEnzymeDB.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/DigestionEnzymeProtein.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/DigestionEnzymeRNA.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/Element.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ElementDB.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/EnzymaticDigestion.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/EnzymaticDigestionLogModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/FineIsotopePatternGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsoSpecWrapper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopePatternGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabet.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabetParser.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabetTextParser.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSElement.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSIsotopeDistribution.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IntegerMassDecomposer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/MassDecomposer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/RealMassDecomposer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/Weights.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/MassDecomposition.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ModificationDefinition.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ModificationDefinitionsSet.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ModificationsDB.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ModifiedNASequenceGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ModifiedPeptideGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/NASequence.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/NucleicAcidSpectrumGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ProteaseDB.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ProteaseDigestion.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/RNaseDB.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/RNaseDigestion.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/Residue.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ResidueDB.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ResidueModification.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/Ribonucleotide.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/RibonucleotideDB.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/SimpleTSGXLMS.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/SpectrumAnnotator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/Tagger.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/WeightWrapper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/AverageLinkage.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterAnalyzer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterFunctor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusteringGrid.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/CompleteLinkage.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/EuclideanSimilarity.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/GridBasedCluster.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/GridBasedClustering.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/HashGrid.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/SingleLinkage.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSharedPeakCount.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrum.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSumAgreeingIntensities.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakAlignment.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectraSTSimilarityScore.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignmentScore.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumCheapDPCorr.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumPrecursorComparator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/SteinScottImproveScore.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/ClassTest.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/Constants.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/EnumHelpers.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/Exception.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/Factory.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/FactoryBase.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/FuzzyStringComparator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/GlobalExceptionHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/Helpers.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/Init.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/LogConfigHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/LogStream.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/Macros.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/MacrosTest.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/PrecisionWrapper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/ProgressLogger.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/RAIICleanup.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/SingletonRegistry.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/StreamHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/TypeAsString.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/Types.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/UniqueIdIndexer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/VersionInfo.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/Adduct.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/BinaryTreeNode.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/CVMappingRule.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/CVMappingTerm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/CVMappings.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/CVReference.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/CalibrationData.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/ChargePair.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/Compomer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/ConstRefVector.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/DRange.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/Date.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/DateTime.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/DistanceMatrix.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/FASTAContainer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/FlagSet.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/GridFeature.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/IsotopeCluster.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/KDTree.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/LPWrapper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/ListUtils.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/ListUtilsIO.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/Map.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/MassExplainer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/MatchedIterator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/Matrix.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/OSWData.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/Param.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/QTCluster.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/String.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/StringListUtils.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/StringUtils.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/StringUtilsSimple.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/StringView.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/Utils/MapUtilities.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/Utils/MatrixUtils.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/BASELINE/MorphologicalFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/CALIBRATION/InternalCalibration.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/CALIBRATION/MZTrafoModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/CALIBRATION/PrecursorCorrection.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/CALIBRATION/TOFCalibration.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/DataFilters.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/Deisotoper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/ElutionPeakDetection.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/FeatureFindingMetabo.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/IsotopeDistributionCache.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/MassTraceDetection.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/SplineInterpolatedPeaks.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/SplinePackage.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedianRapid.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/SMOOTHING/FastLowessSmoothing.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilterAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/SMOOTHING/LowessSmoothing.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/BernNorm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ComplementFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ComplementMarker.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/GoodDiffFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/IntensityBalanceFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/IsotopeDiffFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/IsotopeMarker.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/MarkerMower.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NLargest.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NeutralLossDiffFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NeutralLossMarker.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ParentPeakMower.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/PeakMarker.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Scaler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SqrtMower.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/TICFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ThresholdMower.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/WindowMower.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/AbsoluteQuantitationMethodFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/AbsoluteQuantitationStandardsFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/Base64.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/Bzip2Ifstream.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/Bzip2InputStream.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/CVMappingFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/CachedMzML.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/ChromeleonFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/CompressedInputSource.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/ConsensusXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/ControlledVocabulary.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/CsvFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataAggregatingConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataCachedConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataChainingConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataSqlConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataStoringConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataTransformingConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataWritingConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/NoopMSDataConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/SiriusFragmentAnnotation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/SiriusMzTabWriter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/SwathFileConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DTA2DFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DTAFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/EDTAFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/ExperimentalDesignFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/FASTAFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/FeatureXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/FileHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/FileTypes.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/GNPSMGFFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/GzipIfstream.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/GzipInputStream.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/AcqusHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/CachedMzMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/FidHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/IndexedMzMLDecoder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/IndexedMzMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MascotXMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzDataHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzIdentMLDOMHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzIdentMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLHandlerHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLSpectrumDecoder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLSqliteHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLSqliteSwathHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzQuantMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzXMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/PTMXMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/ParamXMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/ToolDescriptionHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/TraMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/UnimodXMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/XMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/XQuestResultXMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HDF5Connector.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/IBSpectraFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/IdXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/IndexedMzMLFileLoader.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/InspectInfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/InspectOutfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/KroenikFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/LibSVMEncoder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MRMFeaturePickerFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MRMFeatureQCFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MS2File.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MSNumpressCoder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MSPFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MSPGenericFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MSstatsFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MascotGenericFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MascotInfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MascotRemoteQuery.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MascotXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MsInspectFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MzDataFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MzIdentMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MzMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MzQCFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MzQuantMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MzTab.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MzTabBase.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MzTabFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MzTabM.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MzTabMFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MzXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/OMSFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/OMSFileLoad.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/OMSFileStore.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/OMSSACSVFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/OMSSAXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/OPTIONS/FeatureFileOptions.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/OSWFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/PTMXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/ParamCTDFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/ParamXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/PeakTypeEstimator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/PepNovoInfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/PepNovoOutfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/PepXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/PepXMLFileMascot.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/PercolatorInfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/PercolatorOutfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/ProtXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/QcMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/SVOutStream.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/SequestInfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/SequestOutfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/SpecArrayFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/SqMassFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/SqliteConnector.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/SwathFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/TextFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/ToolDescriptionFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/TraMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/TransformationXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/TriqlerFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/UnimodXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/VALIDATORS/MzDataValidator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/VALIDATORS/MzIdentMLValidator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/VALIDATORS/MzMLValidator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/VALIDATORS/MzQuantMLValidator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/VALIDATORS/SemanticValidator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/VALIDATORS/TraMLValidator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/VALIDATORS/XMLValidator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/XMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/XMassFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/XQuestResultXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/XTandemInfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/XTandemXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/ZlibCompression.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/INTERFACES/DataStructures.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/INTERFACES/IMSDataConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/INTERFACES/ISpectrumAccess.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/IONMOBILITY/FAIMSHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/IONMOBILITY/IMDataConverter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/IONMOBILITY/IMTypes.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/AreaIterator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/BaseFeature.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/ChromatogramTools.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/ConsensusMap.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/ConversionHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/DPeak.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/Feature.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/FeatureHandle.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/FeatureMap.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/MRMFeature.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/MRMTransitionGroup.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/MSChromatogram.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/MSExperiment.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/MSSpectrum.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/MassTrace.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/OnDiscMSExperiment.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/Peak1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/Peak2D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/PeakIndex.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/RangeManager.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/RangeUtils.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/RichPeak2D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/SpectrumHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/StandardDeclarations.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/StandardTypes.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/BSpline2d.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/BilinearInterpolation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/CubicSpline2d.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/EmgGradientDescent.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/GridSearch.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/LinearInterpolation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/MSNumpress.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/MathFunctions.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/NNLS/NNLS.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/NonNegativeLeastSquaresSolver.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/RANSAC.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/RANSACModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/RANSACModelLinear.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/RANSACModelQuadratic.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/SplineBisection.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/AsymmetricStatistics.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/AveragePosition.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/BasicStatistics.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/GammaDistributionFitter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/GaussFitter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/GumbelDistributionFitter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/GumbelMaxLikelihoodFitter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/Histogram.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/LinearRegression.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/LinearRegressionWithoutIntercept.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/PosteriorErrorProbabilityModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/QuadraticRegression.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/ROCCurve.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/StatisticFunctions.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/AbsoluteQuantitationStandards.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Acquisition.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/AcquisitionInfo.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/CVTerm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/CVTermList.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/CVTermListInterface.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ContactPerson.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/DataArrays.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/DataProcessing.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Digestion.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/DocumentIDTagger.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/DocumentIdentifier.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ExperimentalDesign.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ExperimentalSettings.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Gradient.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/HPLC.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/AppliedProcessingStep.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/DBSearchParam.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/IdentificationData.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/IdentificationDataConverter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/IdentifiedCompound.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/IdentifiedMolecule.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/IdentifiedSequence.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/InputFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/MetaData.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/Observation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/ObservationMatch.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/ObservationMatchGroup.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/ParentGroup.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/ParentMatch.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/ParentSequence.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/ProcessingSoftware.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/ProcessingStep.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/ScoreType.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/ScoredProcessingResult.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Identification.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/IdentificationHit.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Instrument.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/InstrumentSettings.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/IonDetector.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/IonSource.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/MSQuantifications.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/MassAnalyzer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/MetaInfo.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/MetaInfoDescription.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/MetaInfoInterface.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/MetaInfoInterfaceUtils.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/MetaInfoRegistry.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Modification.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/PeptideEvidence.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/PeptideHit.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/PeptideIdentification.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Precursor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Product.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ProteinHit.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ProteinIdentification.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Sample.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/SampleTreatment.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ScanWindow.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Software.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/SourceFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/SpectrumIdentification.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/SpectrumLookup.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/SpectrumMetaDataLookup.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/SpectrumSettings.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Tagging.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/Contaminants.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/DBSuitability.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/FWHM.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/FeatureSummary.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/FragmentMassError.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/IdentificationSummary.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/MQEvidenceExporter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/MissedCleavages.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/Ms2IdentificationRate.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/Ms2SpectrumStats.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/MzCalibration.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/PSMExplainedIonCurrent.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/PeptideMass.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/QCBase.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/RTAlignment.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/SpectrumCount.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/TIC.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/DetectabilitySimulation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/DigestSimulation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/EGHFitter1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/EGHModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/IonizationSimulation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler_impl.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/LABELING/ICPLLabeler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/LABELING/ITRAQLabeler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/LABELING/LabelFreeLabeler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/LABELING/O18Labeler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/LABELING/SILACLabeler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/MSSim.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/RTSimulation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/RawMSSignalSimulation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/RawTandemMSSignalSimulation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/SimTypes.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/BuildInfo.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/ExternalProcess.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/File.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/FileWatcher.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/JavaInfo.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/NetworkGetRequest.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/PythonInfo.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/RWrapper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/StopWatch.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/SysInfo.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/UpdateCheck.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel_impl.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BiGaussFitter1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BiGaussModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeFitter1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMetaboIdent.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderDefs.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeWavelet.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletConstants.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletTransform.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ModelDescription.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexClustering.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMasses.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredMSExperiment.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredPeak.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFiltering.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringCentroided.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexIsotopicPeakPattern.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteCentroided.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteProfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ProductModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransform.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransformNumIntegration.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/OptimizePick.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerMaxima.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakShape.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.h" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DECHARGING/FeatureDeconvolution.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DECHARGING/ILPDCWrapper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentification.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentificationBase.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentificationCID.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/CompNovoIonScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/CompNovoIonScoringBase.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/CompNovoIonScoringCID.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/DeNovoAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/DeNovoIdentification.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/DeNovoIonScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/DeNovoPostScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/AScore.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/AccurateMassSearchEngine.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/AhoCorasickAmbiguous.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/BasicProteinInferenceAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmAverage.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmBest.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPIons.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPMatrix.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmRanks.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmWorst.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusMapMergerAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/FIAMSDataProcessor.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/FIAMSScheduler.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/FalseDiscoveryRate.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/HiddenMarkovModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/IDBoostGraph.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/IDConflictResolverAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/IDDecoyProbability.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/IDMapper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/IDMergerAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/IDRipper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/IDScoreGetterSetter.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/IDScoreSwitcherAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/MessagePasserFactory.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/MetaboliteSpectralMatching.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/PeptideIndexing.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/PeptideProteinResolution.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/PercolatorFeatureSetHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/PrecursorPurity.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ProtonDistributionModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/SiriusAdapterAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/SiriusMSConverter.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/BaseSuperimposer.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmMedian.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmQuantile.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmThreshold.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/FeatureDistance.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/FeatureMapping.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/LabeledPairFinder.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmKD.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmPrecision.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmRecall.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/QTClusterFinder.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/SimplePairFinder.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/StablePairFinder.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/TransformationDescription.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModelBSpline.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModelInterpolated.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModelLinear.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModelLowess.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MRM/MRMFragmentSelection.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MRM/ReactionMonitoringTransition.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/ChromatogramExtractor.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/ChromatogramExtractorAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/ConfidenceScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SimpleOpenMSSpectraAccessFactory.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMS.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSCached.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSInMemory.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessQuadMZTransforming.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessTransforming.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DIAHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DIAPrescoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DIAScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/IonMobilityScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMAssay.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMBatchFeatureSelector.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMDecoy.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMFeaturePicker.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureQC.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureSelector.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMIonSeries.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMRTNormalizer.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MasstraceCorrelator.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathOSWWriter.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathScores.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathTSVWriter.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathWorkflow.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/PeakIntegrator.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/PeakPickerMRM.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/SONARScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/SpectrumAddition.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/SwathMapMassCorrection.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/SwathQC.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/SwathWindowLoader.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/TransitionPQPFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/TransitionTSVFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/PIP/LocalLinearMap.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/PIP/PeakIntensityPredictor.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/AbsoluteQuantitation.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/AbsoluteQuantitationMethod.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/IsobaricNormalizer.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantifier.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantifierStatistics.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/IsotopeLabelingMDVs.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/ItraqConstants.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/KDTreeFeatureNode.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/ProteinInference.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/ProteinResolver.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/RNPXL/HyperScore.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/RNPXL/MorpheusScore.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/RNPXL/PScore.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/RNPXL/RNPxlFragmentAnnotationHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/RNPXL/RNPxlMarkerIonExtractor.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/RNPXL/RNPxlModificationsGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/RNPXL/RNPxlReport.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/SEQUENCE/NeedlemanWunsch.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/SVM/SVMWrapper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/SVM/SimpleSVM.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/IncludeExcludeTarget.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/InclusionExclusionList.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/MRMMapping.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/MetaboTargetedAssay.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/MetaboTargetedTargetDecoy.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/PSLPFormulation.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/PSProteinInference.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/PrecursorIonSelection.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/TargetedExperiment.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/TargetedExperimentHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/XLMS/OPXLDataStructs.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/XLMS/OPXLHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/XLMS/OpenPepXLAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/XLMS/XFDRAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/XLMS/XQuestScores.cpp" AutoGen: Parsing "SRC:/src/openms/source/APPLICATIONS/ConsoleUtils.cpp" AutoGen: Parsing "SRC:/src/openms/source/APPLICATIONS/INIUpdater.cpp" AutoGen: Parsing "SRC:/src/openms/source/APPLICATIONS/ParameterInformation.cpp" AutoGen: Parsing "SRC:/src/openms/source/APPLICATIONS/SearchEngineBase.cpp" AutoGen: Parsing "SRC:/src/openms/source/APPLICATIONS/TOPPBase.cpp" AutoGen: Parsing "SRC:/src/openms/source/APPLICATIONS/ToolHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/AASequence.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/AdductInfo.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/CrossLinksDB.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/DecoyGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/DigestionEnzyme.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/DigestionEnzymeDB.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/DigestionEnzymeProtein.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/DigestionEnzymeRNA.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/Element.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ElementDB.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/EmpiricalFormula.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/EnzymaticDigestion.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/EnzymaticDigestionLogModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/FineIsotopePatternGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsoSpecWrapper.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopePatternGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabet.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabetTextParser.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSElement.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSIsotopeDistribution.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/RealMassDecomposer.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/Weights.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/MassDecomposition.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ModificationDefinition.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ModificationDefinitionsSet.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ModificationsDB.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ModifiedNASequenceGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ModifiedPeptideGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/NASequence.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/NucleicAcidSpectrumGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ProteaseDB.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ProteaseDigestion.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/RNaseDB.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/RNaseDigestion.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/Residue.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ResidueDB.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ResidueModification.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/Ribonucleotide.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/RibonucleotideDB.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/SimpleTSGXLMS.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/SpectrumAnnotator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/Tagger.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/TheoreticalSpectrumGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/WeightWrapper.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/AverageLinkage.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/ClusterAnalyzer.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/ClusterFunctor.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/ClusterHierarchical.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/ClusteringGrid.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/CompleteLinkage.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/EuclideanSimilarity.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/GridBasedCluster.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/GridBasedClustering.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/SingleLinkage.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/BinnedSharedPeakCount.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/BinnedSpectrum.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/BinnedSumAgreeingIntensities.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/PeakAlignment.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/SpectraSTSimilarityScore.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/SpectrumAlignment.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/SpectrumAlignmentScore.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/SpectrumCheapDPCorr.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/SpectrumPrecursorComparator.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/SteinScottImproveScore.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/ZhangSimilarityScore.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/ClassTest.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/Exception.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/FuzzyStringComparator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/GlobalExceptionHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/Init.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/LogConfigHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/LogStream.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/PrecisionWrapper.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/ProgressLogger.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/RAIICleanup.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/SingletonRegistry.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/StreamHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/TypeAsString.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/Types.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/UniqueIdGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/UniqueIdIndexer.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/UniqueIdInterface.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/VersionInfo.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/Adduct.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/BinaryTreeNode.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/CVMappingRule.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/CVMappingTerm.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/CVMappings.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/CVReference.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/CalibrationData.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/ChargePair.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/Compomer.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/ConstRefVector.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/ConvexHull2D.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/DBoundingBox.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/DIntervalBase.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/DPosition.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/DRange.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/DataValue.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/Date.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/DateTime.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/DefaultParamHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/DistanceMatrix.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/FASTAContainer.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/FlagSet.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/GridFeature.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/LPWrapper.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/ListUtils.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/ListUtilsIO.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/Map.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/MassExplainer.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/MatchedIterator.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/Matrix.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/OSWData.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/Param.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/ParamValue.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/QTCluster.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/String.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/StringConversions.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/StringListUtils.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/StringUtils.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/StringUtilsSimple.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/StringView.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/ToolDescription.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/BASELINE/MorphologicalFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/CALIBRATION/InternalCalibration.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/CALIBRATION/MZTrafoModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/CALIBRATION/PrecursorCorrection.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/CALIBRATION/TOFCalibration.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/DATAREDUCTION/DataFilters.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/DATAREDUCTION/Deisotoper.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/DATAREDUCTION/ElutionPeakDetection.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/DATAREDUCTION/FeatureFindingMetabo.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/DATAREDUCTION/IsotopeDistributionCache.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/DATAREDUCTION/MassTraceDetection.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/DATAREDUCTION/SplineInterpolatedPeaks.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/DATAREDUCTION/SplinePackage.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/ID/IDFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedianRapid.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/SMOOTHING/FastLowessSmoothing.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/SMOOTHING/GaussFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/SMOOTHING/GaussFilterAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/SMOOTHING/LowessSmoothing.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/SMOOTHING/SavitzkyGolayFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/BernNorm.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/ComplementFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/ComplementMarker.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/FilterFunctor.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/GoodDiffFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/IntensityBalanceFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/IsotopeDiffFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/IsotopeMarker.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/LinearResampler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/MarkerMower.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/NLargest.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/NeutralLossDiffFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/NeutralLossMarker.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/Normalizer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/ParentPeakMower.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/PeakMarker.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/Scaler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/SpectraMerger.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/SqrtMower.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/TICFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/ThresholdMower.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/WindowMower.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/AbsoluteQuantitationMethodFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/AbsoluteQuantitationStandardsFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/Base64.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/Bzip2Ifstream.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/Bzip2InputStream.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/CVMappingFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/CachedMzML.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/ChromeleonFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/CompressedInputSource.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/ConsensusXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/ControlledVocabulary.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/CsvFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/MSDataAggregatingConsumer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/MSDataCachedConsumer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/MSDataChainingConsumer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/MSDataSqlConsumer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/MSDataStoringConsumer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/MSDataTransformingConsumer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/MSDataWritingConsumer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/NoopMSDataConsumer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/SiriusFragmentAnnotation.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/SiriusMzTabWriter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/SwathFileConsumer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DTA2DFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DTAFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/EDTAFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/ExperimentalDesignFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/FASTAFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/FeatureXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/FileHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/FileTypes.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/GNPSMGFFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/GzipIfstream.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/GzipInputStream.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/AcqusHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/CachedMzMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/ConsensusXMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/FeatureXMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/FidHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/IndexedMzMLDecoder.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/IndexedMzMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MascotXMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzDataHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzIdentMLDOMHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzIdentMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzMLHandlerHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzMLSpectrumDecoder.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzMLSqliteHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzMLSqliteSwathHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzQuantMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzXMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/PTMXMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/ParamXMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/ToolDescriptionHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/TraMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/UnimodXMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/XMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/XQuestResultXMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HDF5Connector.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/IBSpectraFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/IdXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/IndexedMzMLFileLoader.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/InspectInfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/InspectOutfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/KroenikFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/LibSVMEncoder.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MRMFeaturePickerFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MRMFeatureQCFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MS2File.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MSNumpressCoder.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MSPFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MSPGenericFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MSstatsFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MascotGenericFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MascotInfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MascotRemoteQuery.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MascotXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MsInspectFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MzDataFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MzIdentMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MzMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MzQCFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MzQuantMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MzTab.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MzTabBase.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MzTabFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MzTabM.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MzTabMFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MzXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/OMSFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/OMSFileLoad.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/OMSFileStore.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/OMSSACSVFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/OMSSAXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/OPTIONS/FeatureFileOptions.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/OPTIONS/PeakFileOptions.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/OSWFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/PTMXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/ParamCTDFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/ParamXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/PeakTypeEstimator.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/PepNovoInfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/PepNovoOutfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/PepXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/PepXMLFileMascot.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/PercolatorInfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/PercolatorOutfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/ProtXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/QcMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/SVOutStream.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/SequestInfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/SequestOutfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/SpecArrayFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/SqMassFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/SqliteConnector.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/SwathFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/TextFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/ToolDescriptionFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/TraMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/TransformationXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/TriqlerFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/UnimodXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/VALIDATORS/MzDataValidator.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/VALIDATORS/MzIdentMLValidator.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/VALIDATORS/MzMLValidator.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/VALIDATORS/MzQuantMLValidator.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/VALIDATORS/SemanticValidator.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/VALIDATORS/TraMLValidator.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/VALIDATORS/XMLValidator.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/XMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/XMassFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/XQuestResultXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/XTandemInfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/XTandemXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/ZlibCompression.cpp" AutoGen: Parsing "SRC:/src/openms/source/INTERFACES_IMPL/MockImplementation.cpp" AutoGen: Parsing "SRC:/src/openms/source/IONMOBILITY/FAIMSHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/IONMOBILITY/IMDataConverter.cpp" AutoGen: Parsing "SRC:/src/openms/source/IONMOBILITY/IMTypes.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/AreaIterator.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/BaseFeature.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/ChromatogramPeak.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/ChromatogramTools.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/ConsensusFeature.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/ConsensusMap.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/ConversionHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/DPeak.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/Feature.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/FeatureHandle.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/FeatureMap.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/MRMFeature.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/MRMTransitionGroup.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/MSChromatogram.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/MSExperiment.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/MSSpectrum.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/MassTrace.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/OnDiscMSExperiment.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/Peak1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/Peak2D.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/PeakIndex.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/RangeManager.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/RichPeak2D.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/SpectrumHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/StandardTypes.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/BSpline2d.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/BilinearInterpolation.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/CubicSpline2d.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/EmgGradientDescent.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/GridSearch.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/LinearInterpolation.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/MSNumpress.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/MathFunctions.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/NNLS/NNLS.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/NonNegativeLeastSquaresSolver.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/RANSAC.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/RANSACModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/RANSACModelLinear.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/RANSACModelQuadratic.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/SplineBisection.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/AsymmetricStatistics.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/AveragePosition.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/BasicStatistics.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/GammaDistributionFitter.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/GaussFitter.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/GumbelDistributionFitter.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/GumbelMaxLikelihoodFitter.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/Histogram.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/LinearRegression.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/LinearRegressionWithoutIntercept.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/PosteriorErrorProbabilityModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/QuadraticRegression.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/ROCCurve.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/AbsoluteQuantitationStandards.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Acquisition.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/AcquisitionInfo.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/CVTerm.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/CVTermList.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/CVTermListInterface.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/ChromatogramSettings.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/ContactPerson.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/DataArrays.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/DataProcessing.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Digestion.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/DocumentIDTagger.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/DocumentIdentifier.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/ExperimentalDesign.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/ExperimentalSettings.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Gradient.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/HPLC.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/ID/IdentificationData.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/ID/IdentificationDataConverter.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/ID/IdentifiedMolecule.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Identification.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/IdentificationHit.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Instrument.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/InstrumentSettings.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/IonDetector.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/IonSource.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/MSQuantifications.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/MassAnalyzer.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/MetaInfo.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/MetaInfoDescription.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/MetaInfoInterface.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/MetaInfoRegistry.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Modification.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/PeptideEvidence.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/PeptideHit.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/PeptideIdentification.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Precursor.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Product.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/ProteinHit.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/ProteinIdentification.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Sample.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/SampleTreatment.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/ScanWindow.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Software.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/SourceFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/SpectrumIdentification.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/SpectrumLookup.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/SpectrumMetaDataLookup.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/SpectrumSettings.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Tagging.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/Contaminants.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/DBSuitability.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/FWHM.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/FeatureSummary.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/FragmentMassError.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/IdentificationSummary.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/MQEvidenceExporter.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/MissedCleavages.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/Ms2IdentificationRate.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/Ms2SpectrumStats.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/MzCalibration.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/PSMExplainedIonCurrent.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/PeptideMass.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/QCBase.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/RTAlignment.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/SpectrumCount.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/TIC.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/DetectabilitySimulation.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/DigestSimulation.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/EGHFitter1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/EGHModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/IonizationSimulation.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/LABELING/BaseLabeler.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/LABELING/ICPLLabeler.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/LABELING/ITRAQLabeler.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/LABELING/LabelFreeLabeler.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/LABELING/O18Labeler.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/LABELING/SILACLabeler.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/MSSim.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/RTSimulation.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/RawMSSignalSimulation.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/RawTandemMSSignalSimulation.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/ExternalProcess.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/File.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/FileWatcher.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/JavaInfo.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/NetworkGetRequest.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/PythonInfo.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/RWrapper.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/StopWatch.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/SysInfo.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/UpdateCheck.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/BaseModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussFitter1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EmgModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeFitter1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMetaboIdent.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/GaussModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWavelet.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletTransform.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ModelDescription.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexClustering.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMasses.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredMSExperiment.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredPeak.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFiltering.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringCentroided.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexIsotopicPeakPattern.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteCentroided.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteProfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ProductModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransform.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransformNumIntegration.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/OptimizePick.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerMaxima.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakShape.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.cpp" AutoMoc: Generating "SRC:/build/src/openms/OpenMS_autogen/QMGZ3XHWZJ/moc_MascotRemoteQuery.cpp", because it doesn't exist, from "SRC:/src/openms/include/OpenMS/FORMAT/MascotRemoteQuery.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/WildMagic -I/usr/include/eigen3 -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/QMGZ3XHWZJ/moc_MascotRemoteQuery.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MascotRemoteQuery.h AutoMoc: Generating "SRC:/build/src/openms/OpenMS_autogen/ACY6PAVLTH/moc_ExternalProcess.cpp", because it doesn't exist, from "SRC:/src/openms/include/OpenMS/SYSTEM/ExternalProcess.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/WildMagic -I/usr/include/eigen3 -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/ACY6PAVLTH/moc_ExternalProcess.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SYSTEM/ExternalProcess.h AutoMoc: Reading dependencies from "SRC:/build/src/openms/OpenMS_autogen/ACY6PAVLTH/moc_ExternalProcess.cpp.d" AutoMoc: Generating "SRC:/build/src/openms/OpenMS_autogen/ACY6PAVLTH/moc_FileWatcher.cpp", because it doesn't exist, from "SRC:/src/openms/include/OpenMS/SYSTEM/FileWatcher.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/WildMagic -I/usr/include/eigen3 -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/ACY6PAVLTH/moc_FileWatcher.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SYSTEM/FileWatcher.h AutoMoc: Reading dependencies from "SRC:/build/src/openms/OpenMS_autogen/QMGZ3XHWZJ/moc_MascotRemoteQuery.cpp.d" AutoMoc: Generating "SRC:/build/src/openms/OpenMS_autogen/ACY6PAVLTH/moc_NetworkGetRequest.cpp", because it doesn't exist, from "SRC:/src/openms/include/OpenMS/SYSTEM/NetworkGetRequest.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/WildMagic -I/usr/include/eigen3 -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/ACY6PAVLTH/moc_NetworkGetRequest.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SYSTEM/NetworkGetRequest.h AutoMoc: Reading dependencies from "SRC:/build/src/openms/OpenMS_autogen/ACY6PAVLTH/moc_FileWatcher.cpp.d" AutoMoc: Reading dependencies from "SRC:/build/src/openms/OpenMS_autogen/ACY6PAVLTH/moc_NetworkGetRequest.cpp.d" AutoMoc: Generating MOC compilation "SRC:/build/src/openms/OpenMS_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/src/openms/CMakeFiles/OpenMS_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/src/openms/CMakeFiles/OpenMS_autogen.dir/AutogenUsed.txt" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 0%] Built target OpenMS_autogen make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms/CMakeFiles/OpenMS.dir/build.make src/openms/CMakeFiles/OpenMS.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 0%] creating build_config.h file ({event: PRE_BUILD}, {filename: build_config.h}) cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/cmake -E copy_if_different /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include/OpenMS/build_config_Release.h /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include/OpenMS/build_config.h make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/openms /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms/CMakeFiles/OpenMS.dir/build.make src/openms/CMakeFiles/OpenMS.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 1%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/INTERFACES_IMPL/MockImplementation.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/INTERFACES_IMPL/MockImplementation.cpp.o -MF CMakeFiles/OpenMS.dir/source/INTERFACES_IMPL/MockImplementation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/INTERFACES_IMPL/MockImplementation.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/INTERFACES_IMPL/MockImplementation.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 1%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/OpenMS_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/OpenMS_autogen/mocs_compilation.cpp.o -MF CMakeFiles/OpenMS.dir/OpenMS_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/OpenMS.dir/OpenMS_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/mocs_compilation.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/QMGZ3XHWZJ/../../../../../src/openms/include/OpenMS/FORMAT/MascotRemoteQuery.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/QMGZ3XHWZJ/moc_MascotRemoteQuery.cpp:10, from /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/mocs_compilation.cpp:2: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/QMGZ3XHWZJ/../../../../../src/openms/include/OpenMS/FORMAT/MascotRemoteQuery.h:139:38: note: by 'OpenMS::MascotRemoteQuery& OpenMS::MascotRemoteQuery::operator=(const OpenMS::MascotRemoteQuery&)' 139 | OPENMS_DLLAPI MascotRemoteQuery& operator=(const MascotRemoteQuery& rhs); | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 1%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/Exception.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/Exception.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/Exception.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/Exception.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CONCEPT/Exception.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 1%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/ClassTest.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/ClassTest.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/ClassTest.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/ClassTest.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CONCEPT/ClassTest.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/ConsensusXMLFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CONCEPT/ClassTest.cpp:41: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/PrecisionWrapper.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/ClassTest.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CONCEPT/ClassTest.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 1%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/GlobalExceptionHandler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/GlobalExceptionHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/GlobalExceptionHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/GlobalExceptionHandler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CONCEPT/GlobalExceptionHandler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 1%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/Init.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/Init.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/Init.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/Init.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CONCEPT/Init.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 1%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/FuzzyStringComparator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/FuzzyStringComparator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/FuzzyStringComparator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/FuzzyStringComparator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CONCEPT/FuzzyStringComparator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 1%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/LogConfigHandler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/LogConfigHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/LogConfigHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/LogConfigHandler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CONCEPT/LogConfigHandler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 1%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/PrecisionWrapper.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/PrecisionWrapper.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/PrecisionWrapper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/PrecisionWrapper.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CONCEPT/PrecisionWrapper.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 1%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/ProgressLogger.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/ProgressLogger.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/ProgressLogger.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/ProgressLogger.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CONCEPT/ProgressLogger.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 1%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/RAIICleanup.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/RAIICleanup.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/RAIICleanup.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/RAIICleanup.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CONCEPT/RAIICleanup.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 1%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/LogStream.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/LogStream.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/LogStream.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/LogStream.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CONCEPT/LogStream.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 1%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/SingletonRegistry.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/SingletonRegistry.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/SingletonRegistry.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/SingletonRegistry.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CONCEPT/SingletonRegistry.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/TypeAsString.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/TypeAsString.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/TypeAsString.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/TypeAsString.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CONCEPT/TypeAsString.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/Types.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/Types.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/Types.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/Types.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CONCEPT/Types.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdGenerator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdGenerator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CONCEPT/UniqueIdGenerator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/StreamHandler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/StreamHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/StreamHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/StreamHandler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CONCEPT/StreamHandler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdInterface.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdInterface.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdInterface.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdInterface.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CONCEPT/UniqueIdInterface.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdIndexer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdIndexer.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdIndexer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdIndexer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CONCEPT/UniqueIdIndexer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/VersionInfo.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/VersionInfo.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/VersionInfo.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/VersionInfo.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CONCEPT/VersionInfo.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/ExternalProcess.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/ExternalProcess.cpp.o -MF CMakeFiles/OpenMS.dir/source/SYSTEM/ExternalProcess.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SYSTEM/ExternalProcess.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SYSTEM/ExternalProcess.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/FileWatcher.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/FileWatcher.cpp.o -MF CMakeFiles/OpenMS.dir/source/SYSTEM/FileWatcher.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SYSTEM/FileWatcher.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SYSTEM/FileWatcher.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/JavaInfo.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/JavaInfo.cpp.o -MF CMakeFiles/OpenMS.dir/source/SYSTEM/JavaInfo.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SYSTEM/JavaInfo.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SYSTEM/JavaInfo.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/File.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/File.cpp.o -MF CMakeFiles/OpenMS.dir/source/SYSTEM/File.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SYSTEM/File.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SYSTEM/File.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/NetworkGetRequest.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/NetworkGetRequest.cpp.o -MF CMakeFiles/OpenMS.dir/source/SYSTEM/NetworkGetRequest.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SYSTEM/NetworkGetRequest.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SYSTEM/NetworkGetRequest.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/PythonInfo.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/PythonInfo.cpp.o -MF CMakeFiles/OpenMS.dir/source/SYSTEM/PythonInfo.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SYSTEM/PythonInfo.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SYSTEM/PythonInfo.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/RWrapper.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/RWrapper.cpp.o -MF CMakeFiles/OpenMS.dir/source/SYSTEM/RWrapper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SYSTEM/RWrapper.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SYSTEM/RWrapper.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/StopWatch.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/StopWatch.cpp.o -MF CMakeFiles/OpenMS.dir/source/SYSTEM/StopWatch.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SYSTEM/StopWatch.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SYSTEM/StopWatch.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/SysInfo.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/SysInfo.cpp.o -MF CMakeFiles/OpenMS.dir/source/SYSTEM/SysInfo.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SYSTEM/SysInfo.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SYSTEM/SysInfo.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/AsymmetricStatistics.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/AsymmetricStatistics.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/AsymmetricStatistics.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/AsymmetricStatistics.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/MATH/STATISTICS/AsymmetricStatistics.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/AveragePosition.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/AveragePosition.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/AveragePosition.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/AveragePosition.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/MATH/STATISTICS/AveragePosition.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/BasicStatistics.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/BasicStatistics.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/BasicStatistics.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/BasicStatistics.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/MATH/STATISTICS/BasicStatistics.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/UpdateCheck.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/UpdateCheck.cpp.o -MF CMakeFiles/OpenMS.dir/source/SYSTEM/UpdateCheck.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SYSTEM/UpdateCheck.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SYSTEM/UpdateCheck.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GammaDistributionFitter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GammaDistributionFitter.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GammaDistributionFitter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GammaDistributionFitter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/MATH/STATISTICS/GammaDistributionFitter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GaussFitter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GaussFitter.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GaussFitter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GaussFitter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/MATH/STATISTICS/GaussFitter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GumbelDistributionFitter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GumbelDistributionFitter.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GumbelDistributionFitter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GumbelDistributionFitter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/MATH/STATISTICS/GumbelDistributionFitter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/Histogram.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/Histogram.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/Histogram.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/Histogram.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/MATH/STATISTICS/Histogram.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GumbelMaxLikelihoodFitter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GumbelMaxLikelihoodFitter.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GumbelMaxLikelihoodFitter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GumbelMaxLikelihoodFitter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/MATH/STATISTICS/GumbelMaxLikelihoodFitter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/LinearRegressionWithoutIntercept.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/LinearRegressionWithoutIntercept.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/LinearRegressionWithoutIntercept.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/LinearRegressionWithoutIntercept.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/MATH/STATISTICS/LinearRegressionWithoutIntercept.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/LinearRegression.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra 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/usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra 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/usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/PosteriorErrorProbabilityModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/PosteriorErrorProbabilityModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/PosteriorErrorProbabilityModel.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/MATH/STATISTICS/PosteriorErrorProbabilityModel.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/MATH/STATISTICS/PosteriorErrorProbabilityModel.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/MATH/STATISTICS/PosteriorErrorProbabilityModel.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/MATH/STATISTICS/PosteriorErrorProbabilityModel.h:272:40: note: by 'OpenMS::Math::PosteriorErrorProbabilityModel& OpenMS::Math::PosteriorErrorProbabilityModel::operator=(const OpenMS::Math::PosteriorErrorProbabilityModel&)' 272 | PosteriorErrorProbabilityModel & operator=(const PosteriorErrorProbabilityModel & rhs); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/BilinearInterpolation.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms 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/usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/BilinearInterpolation.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/BilinearInterpolation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/BilinearInterpolation.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/MATH/MISC/BilinearInterpolation.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/ROCCurve.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms 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/usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/ROCCurve.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/ROCCurve.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/ROCCurve.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/MATH/STATISTICS/ROCCurve.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/BSpline2d.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms 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/usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/BSpline2d.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/BSpline2d.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/BSpline2d.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/MATH/MISC/BSpline2d.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/CubicSpline2d.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/CubicSpline2d.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/CubicSpline2d.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/CubicSpline2d.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/MATH/MISC/CubicSpline2d.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/GridSearch.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/GridSearch.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/GridSearch.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/GridSearch.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/MATH/MISC/GridSearch.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/LinearInterpolation.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/LinearInterpolation.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/LinearInterpolation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/LinearInterpolation.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/MATH/MISC/LinearInterpolation.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/MathFunctions.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/MathFunctions.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/MathFunctions.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/MathFunctions.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/MATH/MISC/MathFunctions.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/NonNegativeLeastSquaresSolver.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/NonNegativeLeastSquaresSolver.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/NonNegativeLeastSquaresSolver.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/NonNegativeLeastSquaresSolver.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/MATH/MISC/NonNegativeLeastSquaresSolver.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 8%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/MSNumpress.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/MSNumpress.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/MSNumpress.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/MSNumpress.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/MATH/MISC/MSNumpress.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 8%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSAC.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSAC.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSAC.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSAC.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/MATH/MISC/RANSAC.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 8%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModel.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModel.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/MATH/MISC/RANSACModel.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 8%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModelLinear.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModelLinear.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModelLinear.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModelLinear.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/MATH/MISC/RANSACModelLinear.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 8%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModelQuadratic.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModelQuadratic.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModelQuadratic.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModelQuadratic.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/MATH/MISC/RANSACModelQuadratic.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/EmgGradientDescent.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/EmgGradientDescent.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/EmgGradientDescent.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/EmgGradientDescent.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/MATH/MISC/EmgGradientDescent.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/MATH/MISC/EmgGradientDescent.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/MATH/MISC/EmgGradientDescent.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/MATH/MISC/EmgGradientDescent.h:64:23: note: by 'OpenMS::EmgGradientDescent& OpenMS::EmgGradientDescent::operator=(const OpenMS::EmgGradientDescent&)' 64 | class OPENMS_DLLAPI EmgGradientDescent : | ^~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 8%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/SplineBisection.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/SplineBisection.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/SplineBisection.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/SplineBisection.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/MATH/MISC/SplineBisection.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 8%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/NNLS/NNLS.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/NNLS/NNLS.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/NNLS/NNLS.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/NNLS/NNLS.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/MATH/MISC/NNLS/NNLS.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 8%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/BinaryTreeNode.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/BinaryTreeNode.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/BinaryTreeNode.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/BinaryTreeNode.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/BinaryTreeNode.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 8%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Adduct.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Adduct.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Adduct.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Adduct.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/Adduct.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 8%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ChargePair.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ChargePair.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ChargePair.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ChargePair.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/ChargePair.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 8%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CalibrationData.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CalibrationData.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CalibrationData.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CalibrationData.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/CalibrationData.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 8%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Compomer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Compomer.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Compomer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Compomer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/Compomer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 10%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ConvexHull2D.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ConvexHull2D.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ConvexHull2D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ConvexHull2D.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/ConvexHull2D.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 10%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappingTerm.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappingTerm.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappingTerm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappingTerm.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/CVMappingTerm.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 10%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappingRule.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappingRule.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappingRule.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappingRule.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/CVMappingRule.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 10%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVReference.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVReference.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVReference.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVReference.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/CVReference.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 10%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappings.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappings.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappings.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappings.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/CVMappings.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 10%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DBoundingBox.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DBoundingBox.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DBoundingBox.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DBoundingBox.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/DBoundingBox.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 10%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DIntervalBase.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DIntervalBase.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DIntervalBase.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DIntervalBase.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/DIntervalBase.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 8%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ConstRefVector.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ConstRefVector.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ConstRefVector.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ConstRefVector.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/ConstRefVector.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/ConstRefVector.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ConstRefVector.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/ConstRefVector.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 10%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DPosition.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DPosition.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DPosition.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DPosition.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/DPosition.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 10%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DRange.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DRange.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DRange.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DRange.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/DRange.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 10%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Date.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Date.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Date.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Date.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/Date.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 10%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DataValue.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DataValue.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DataValue.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DataValue.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/DataValue.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 10%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DateTime.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DateTime.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DateTime.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DateTime.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/DateTime.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 12%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DistanceMatrix.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DistanceMatrix.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DistanceMatrix.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DistanceMatrix.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/DistanceMatrix.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 10%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DefaultParamHandler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DefaultParamHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DefaultParamHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DefaultParamHandler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/DefaultParamHandler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 12%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/FlagSet.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/FlagSet.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/FlagSet.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/FlagSet.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/FlagSet.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 12%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/FASTAContainer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/FASTAContainer.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/FASTAContainer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/FASTAContainer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/FASTAContainer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 12%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ListUtils.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ListUtils.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ListUtils.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ListUtils.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/ListUtils.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 12%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ListUtilsIO.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ListUtilsIO.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ListUtilsIO.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ListUtilsIO.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/ListUtilsIO.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 12%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/LPWrapper.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/LPWrapper.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/LPWrapper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/LPWrapper.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/LPWrapper.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 12%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Map.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Map.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Map.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Map.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/Map.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 12%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/GridFeature.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/GridFeature.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/GridFeature.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/GridFeature.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/GridFeature.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 12%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/MatchedIterator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/MatchedIterator.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/MatchedIterator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/MatchedIterator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/MatchedIterator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 12%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Matrix.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Matrix.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Matrix.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Matrix.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/Matrix.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 12%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/MassExplainer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/MassExplainer.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/MassExplainer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/MassExplainer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/MassExplainer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 12%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/OSWData.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/OSWData.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/OSWData.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/OSWData.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/OSWData.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/OSWData.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/OSWData.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/OSWData.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 14%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ParamValue.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ParamValue.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ParamValue.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ParamValue.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/ParamValue.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 12%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Param.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Param.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Param.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Param.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/Param.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 14%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/QTCluster.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/QTCluster.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/QTCluster.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/QTCluster.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/QTCluster.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 14%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringView.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringView.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringView.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringView.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/StringView.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 14%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringListUtils.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringListUtils.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringListUtils.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringListUtils.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/StringListUtils.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 14%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringUtils.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringUtils.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringUtils.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringUtils.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/StringUtils.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 14%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringUtilsSimple.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringUtilsSimple.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringUtilsSimple.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringUtilsSimple.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/StringUtilsSimple.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 14%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/String.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/String.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/String.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/String.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/String.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 14%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ToolDescription.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ToolDescription.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ToolDescription.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ToolDescription.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/ToolDescription.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 14%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringConversions.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringConversions.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringConversions.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringConversions.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/StringConversions.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 14%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Acquisition.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Acquisition.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/Acquisition.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/Acquisition.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/Acquisition.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 14%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/AcquisitionInfo.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/AcquisitionInfo.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/AcquisitionInfo.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/AcquisitionInfo.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/AcquisitionInfo.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/CVTerm.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/CVTerm.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/CVTerm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/CVTerm.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/CVTerm.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/CVTermList.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/CVTermList.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/CVTermList.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/CVTermList.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/CVTermList.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/CVTermListInterface.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/CVTermListInterface.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/CVTermListInterface.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/CVTermListInterface.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/CVTermListInterface.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 14%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/AbsoluteQuantitationStandards.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/AbsoluteQuantitationStandards.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/AbsoluteQuantitationStandards.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/AbsoluteQuantitationStandards.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/AbsoluteQuantitationStandards.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/AbsoluteQuantitationStandards.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/AbsoluteQuantitationStandards.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Feature.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ContactPerson.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ContactPerson.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/ContactPerson.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/ContactPerson.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/ContactPerson.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/DataArrays.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/DataArrays.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/DataArrays.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/DataArrays.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/DataArrays.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ChromatogramSettings.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ChromatogramSettings.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/ChromatogramSettings.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/ChromatogramSettings.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/ChromatogramSettings.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Digestion.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Digestion.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/Digestion.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/Digestion.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/Digestion.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/DataProcessing.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/DataProcessing.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/DataProcessing.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/DataProcessing.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/DataProcessing.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/DocumentIDTagger.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/DocumentIDTagger.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/DocumentIDTagger.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/DocumentIDTagger.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/DocumentIDTagger.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/DocumentIdentifier.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms 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/usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/DocumentIdentifier.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/DocumentIdentifier.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/DocumentIdentifier.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/DocumentIdentifier.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ExperimentalSettings.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms 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/usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra 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/usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra 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-ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/HPLC.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/HPLC.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/HPLC.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/HPLC.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ExperimentalDesign.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ExperimentalDesign.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/ExperimentalDesign.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/ExperimentalDesign.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/ExperimentalDesign.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/ExperimentalDesign.cpp:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ExperimentalDesign.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/ExperimentalDesign.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 17%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Identification.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include 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-ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Identification.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/Identification.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/Identification.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/Identification.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 17%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/IdentificationHit.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include 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-Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/IdentificationHit.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/IdentificationHit.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/IdentificationHit.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/IdentificationHit.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 17%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/InstrumentSettings.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include 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-Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/InstrumentSettings.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/InstrumentSettings.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/InstrumentSettings.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/InstrumentSettings.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 17%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Instrument.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Instrument.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/Instrument.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/Instrument.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/Instrument.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 17%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/IonDetector.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/IonDetector.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/IonDetector.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/IonDetector.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/IonDetector.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 17%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/IonSource.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/IonSource.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/IonSource.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/IonSource.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/IonSource.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 17%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MassAnalyzer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MassAnalyzer.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/MassAnalyzer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/MassAnalyzer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/MassAnalyzer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 17%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MetaInfo.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MetaInfo.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/MetaInfo.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/MetaInfo.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/MetaInfo.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 17%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoDescription.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoDescription.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoDescription.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoDescription.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/MetaInfoDescription.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 17%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoInterface.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include 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-Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoInterface.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoInterface.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoInterface.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/MetaInfoInterface.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 17%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoRegistry.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoRegistry.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoRegistry.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoRegistry.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/MetaInfoRegistry.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 19%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Modification.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Modification.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/Modification.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/Modification.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/Modification.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 19%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/PeptideEvidence.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/PeptideEvidence.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/PeptideEvidence.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/PeptideEvidence.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/PeptideEvidence.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 17%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MSQuantifications.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MSQuantifications.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/MSQuantifications.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/MSQuantifications.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/MSQuantifications.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/MSQuantifications.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/MSQuantifications.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/MSQuantifications.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 19%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/PeptideHit.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/PeptideHit.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/PeptideHit.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/PeptideHit.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/PeptideHit.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 19%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Precursor.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Precursor.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/Precursor.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/Precursor.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/Precursor.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 19%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Product.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Product.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/Product.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/Product.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/Product.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 19%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ProteinHit.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ProteinHit.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/ProteinHit.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/ProteinHit.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/ProteinHit.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 19%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/PeptideIdentification.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/PeptideIdentification.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/PeptideIdentification.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/PeptideIdentification.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/PeptideIdentification.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/PeptideIdentification.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/PeptideHit.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/PeptideIdentification.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/PeptideIdentification.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 19%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Sample.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Sample.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/Sample.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/Sample.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/Sample.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 19%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SampleTreatment.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SampleTreatment.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/SampleTreatment.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/SampleTreatment.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/SampleTreatment.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 19%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ScanWindow.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ScanWindow.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/ScanWindow.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/ScanWindow.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/ScanWindow.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 19%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Software.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Software.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/Software.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/Software.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/Software.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 21%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SourceFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SourceFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/SourceFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/SourceFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/SourceFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 21%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SpectrumIdentification.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SpectrumIdentification.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/SpectrumIdentification.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/SpectrumIdentification.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/SpectrumIdentification.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 19%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ProteinIdentification.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ProteinIdentification.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/ProteinIdentification.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/ProteinIdentification.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/ProteinIdentification.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/ProteinIdentification.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/LogStream.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/ProteinIdentification.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 21%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SpectrumMetaDataLookup.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SpectrumMetaDataLookup.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/SpectrumMetaDataLookup.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/SpectrumMetaDataLookup.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/SpectrumMetaDataLookup.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/SpectrumMetaDataLookup.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/SpectrumMetaDataLookup.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/LogStream.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/SpectrumLookup.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/SpectrumMetaDataLookup.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 21%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SpectrumSettings.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SpectrumSettings.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/SpectrumSettings.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/SpectrumSettings.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/SpectrumSettings.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 21%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SpectrumLookup.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SpectrumLookup.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/SpectrumLookup.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/SpectrumLookup.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/SpectrumLookup.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 21%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Tagging.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms 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/usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra 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-ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long 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-I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ID/IdentifiedMolecule.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/ID/IdentifiedMolecule.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/ID/IdentifiedMolecule.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/ID/IdentifiedMolecule.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 21%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/AreaIterator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/AreaIterator.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/AreaIterator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/AreaIterator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/AreaIterator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 21%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ID/IdentificationDataConverter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ID/IdentificationDataConverter.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/ID/IdentificationDataConverter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/ID/IdentificationDataConverter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/ID/IdentificationDataConverter.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ID/IdentificationDataConverter.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/ID/IdentificationDataConverter.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/MetaInfoInterface.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/DataProcessing.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ID/ProcessingStep.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ID/IdentificationData.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ID/IdentificationDataConverter.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 21%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/BaseFeature.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/BaseFeature.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/BaseFeature.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/BaseFeature.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/BaseFeature.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 21%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/ConsensusFeature.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/ConsensusFeature.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/ConsensusFeature.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/ConsensusFeature.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/ConsensusFeature.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/ConsensusFeature.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DRange.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/ConsensusFeature.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 23%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/ConversionHelper.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/ConversionHelper.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/ConversionHelper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/ConversionHelper.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/ConversionHelper.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConversionHelper.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/ConversionHelper.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 23%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/DPeak.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/DPeak.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/DPeak.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/DPeak.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/DPeak.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 21%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/ConsensusMap.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/ConsensusMap.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/ConsensusMap.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/ConsensusMap.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/ConsensusMap.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/ConsensusMap.cpp:42: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/QCBase.h:132:20: warning: identifier 'requires' is a keyword in C++20 [-Wc++20-compat] 132 | virtual Status requires() const = 0; | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/ConsensusMap.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 23%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/Feature.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/Feature.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/Feature.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/Feature.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/Feature.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 23%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/FeatureHandle.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/FeatureHandle.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/FeatureHandle.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/FeatureHandle.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/FeatureHandle.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 23%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MassTrace.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MassTrace.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/MassTrace.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/MassTrace.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/MassTrace.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MassTrace.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/MassTrace.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Peak2D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MassTrace.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 23%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/FeatureMap.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/FeatureMap.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/FeatureMap.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/FeatureMap.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/FeatureMap.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/FeatureMap.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Feature.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 23%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MRMFeature.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MRMFeature.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/MRMFeature.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/MRMFeature.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/MRMFeature.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 23%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MRMTransitionGroup.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MRMTransitionGroup.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/MRMTransitionGroup.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/MRMTransitionGroup.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/MRMTransitionGroup.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 23%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MSExperiment.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MSExperiment.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/MSExperiment.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/MSExperiment.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/MSExperiment.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/MSExperiment.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/MSExperiment.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:61:23: note: by 'OpenMS::LinearResampler& OpenMS::LinearResampler::operator=(const OpenMS::LinearResampler&)' 61 | class OPENMS_DLLAPI LinearResampler : | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h:57:23: note: by 'OpenMS::LinearResamplerAlign::operator=' 57 | class OPENMS_DLLAPI LinearResamplerAlign : | ^~~~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 23%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MSSpectrum.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MSSpectrum.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/MSSpectrum.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/MSSpectrum.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/MSSpectrum.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 23%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/Peak1D.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/Peak1D.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/Peak1D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/Peak1D.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/Peak1D.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 23%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/Peak2D.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/Peak2D.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/Peak2D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/Peak2D.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/Peak2D.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 25%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/PeakIndex.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/PeakIndex.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/PeakIndex.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/PeakIndex.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/PeakIndex.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 25%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/RangeManager.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/RangeManager.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/RangeManager.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/RangeManager.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/RangeManager.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 25%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/RichPeak2D.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/RichPeak2D.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/RichPeak2D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/RichPeak2D.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/RichPeak2D.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 25%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/StandardTypes.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/StandardTypes.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/StandardTypes.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/StandardTypes.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/StandardTypes.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 23%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/OnDiscMSExperiment.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/OnDiscMSExperiment.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/OnDiscMSExperiment.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/OnDiscMSExperiment.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/OnDiscMSExperiment.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/OnDiscMSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/OnDiscMSExperiment.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/INTERFACES/DataStructures.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/OnDiscMSExperiment.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 25%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/ChromatogramPeak.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/ChromatogramPeak.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/ChromatogramPeak.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/ChromatogramPeak.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/ChromatogramPeak.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 25%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/ChromatogramTools.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/ChromatogramTools.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/ChromatogramTools.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/ChromatogramTools.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/ChromatogramTools.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ChromatogramTools.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/ChromatogramTools.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Map.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ChromatogramTools.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 25%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/SpectrumHelper.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/SpectrumHelper.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/SpectrumHelper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/SpectrumHelper.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/SpectrumHelper.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 25%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MSChromatogram.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MSChromatogram.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/MSChromatogram.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/MSChromatogram.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/MSChromatogram.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 25%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/AdductInfo.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/AdductInfo.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/AdductInfo.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/AdductInfo.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/AdductInfo.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 25%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/AASequence.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/AASequence.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/AASequence.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/AASequence.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/AASequence.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 25%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/CrossLinksDB.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/CrossLinksDB.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/CrossLinksDB.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/CrossLinksDB.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/CrossLinksDB.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 25%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/DecoyGenerator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/DecoyGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/DecoyGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/DecoyGenerator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/DecoyGenerator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 25%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/Element.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/Element.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/Element.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/Element.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/Element.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ElementDB.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ElementDB.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ElementDB.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ElementDB.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/ElementDB.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/EmpiricalFormula.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/EmpiricalFormula.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/EmpiricalFormula.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/EmpiricalFormula.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/EmpiricalFormula.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/EnzymaticDigestionLogModel.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/EnzymaticDigestionLogModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/EnzymaticDigestionLogModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/EnzymaticDigestionLogModel.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/EnzymaticDigestionLogModel.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzyme.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzyme.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzyme.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzyme.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/DigestionEnzyme.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeProtein.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeProtein.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeProtein.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeProtein.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/DigestionEnzymeProtein.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeRNA.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include 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-Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeRNA.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeRNA.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeRNA.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/DigestionEnzymeRNA.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeDB.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include 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-Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeDB.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeDB.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeDB.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/DigestionEnzymeDB.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationDefinition.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include 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-Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationDefinition.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationDefinition.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationDefinition.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/ModificationDefinition.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationDefinitionsSet.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationDefinitionsSet.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationDefinitionsSet.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationDefinitionsSet.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/ModificationDefinitionsSet.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/EnzymaticDigestion.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/EnzymaticDigestion.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/EnzymaticDigestion.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/EnzymaticDigestion.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/EnzymaticDigestion.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModifiedNASequenceGenerator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModifiedNASequenceGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModifiedNASequenceGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModifiedNASequenceGenerator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/ModifiedNASequenceGenerator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationsDB.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationsDB.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationsDB.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationsDB.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/ModificationsDB.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/NASequence.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/NASequence.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/NASequence.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/NASequence.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/NASequence.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModifiedPeptideGenerator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModifiedPeptideGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModifiedPeptideGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModifiedPeptideGenerator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/ModifiedPeptideGenerator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ProteaseDB.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ProteaseDB.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ProteaseDB.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ProteaseDB.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/ProteaseDB.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/NucleicAcidSpectrumGenerator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/NucleicAcidSpectrumGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/NucleicAcidSpectrumGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/NucleicAcidSpectrumGenerator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/NucleicAcidSpectrumGenerator.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/NucleicAcidSpectrumGenerator.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/NucleicAcidSpectrumGenerator.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/NucleicAcidSpectrumGenerator.h:72:35: note: by 'OpenMS::NucleicAcidSpectrumGenerator& OpenMS::NucleicAcidSpectrumGenerator::operator=(const OpenMS::NucleicAcidSpectrumGenerator&)' 72 | NucleicAcidSpectrumGenerator& operator=(const NucleicAcidSpectrumGenerator& source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/Residue.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/Residue.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/Residue.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/Residue.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/Residue.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ProteaseDigestion.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ProteaseDigestion.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ProteaseDigestion.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ProteaseDigestion.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/ProteaseDigestion.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ResidueDB.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ResidueDB.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ResidueDB.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ResidueDB.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/ResidueDB.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ResidueModification.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ResidueModification.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ResidueModification.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ResidueModification.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/ResidueModification.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/RNaseDB.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/RNaseDB.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/RNaseDB.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/RNaseDB.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/RNaseDB.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/Ribonucleotide.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/Ribonucleotide.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/Ribonucleotide.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/Ribonucleotide.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/Ribonucleotide.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/RibonucleotideDB.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/RibonucleotideDB.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/RibonucleotideDB.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/RibonucleotideDB.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/RibonucleotideDB.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/RNaseDigestion.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/RNaseDigestion.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/RNaseDigestion.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/RNaseDigestion.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/RNaseDigestion.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/SimpleTSGXLMS.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/SimpleTSGXLMS.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/SimpleTSGXLMS.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/SimpleTSGXLMS.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/SimpleTSGXLMS.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/SimpleTSGXLMS.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/SimpleTSGXLMS.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63, from /usr/include/c++/13/map:62, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/Residue.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/SimpleTSGXLMS.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/SimpleTSGXLMS.h:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/SimpleTSGXLMS.h:115:23: note: by 'OpenMS::SimpleTSGXLMS& OpenMS::SimpleTSGXLMS::operator=(const OpenMS::SimpleTSGXLMS&)' 115 | SimpleTSGXLMS & operator=(const SimpleTSGXLMS & tsg); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/SpectrumAnnotator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/SpectrumAnnotator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/SpectrumAnnotator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/SpectrumAnnotator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/SpectrumAnnotator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/SpectrumAnnotator.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/SpectrumAnnotator.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/SpectrumAnnotator.h:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:87:35: note: by 'OpenMS::TheoreticalSpectrumGenerator& OpenMS::TheoreticalSpectrumGenerator::operator=(const OpenMS::TheoreticalSpectrumGenerator&)' 87 | TheoreticalSpectrumGenerator& operator=(const TheoreticalSpectrumGenerator& tsg); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/SpectrumAnnotator.h:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h:84:25: note: by 'OpenMS::SpectrumAlignment& OpenMS::SpectrumAlignment::operator=(const OpenMS::SpectrumAlignment&)' 84 | SpectrumAlignment & operator=(const SpectrumAlignment & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/SpectrumAnnotator.h:79:25: note: by 'OpenMS::SpectrumAnnotator& OpenMS::SpectrumAnnotator::operator=(const OpenMS::SpectrumAnnotator&)' 79 | SpectrumAnnotator & operator=(const SpectrumAnnotator & tsg); | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGenerator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGenerator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGenerator.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGenerator.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGenerator.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:87:35: note: by 'OpenMS::TheoreticalSpectrumGenerator& OpenMS::TheoreticalSpectrumGenerator::operator=(const OpenMS::TheoreticalSpectrumGenerator&)' 87 | TheoreticalSpectrumGenerator& operator=(const TheoreticalSpectrumGenerator& tsg); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGenerator.h:45: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63, from /usr/include/c++/13/map:62, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/Residue.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGenerator.h:197:39: note: by 'OpenMS::SvmTheoreticalSpectrumGenerator& OpenMS::SvmTheoreticalSpectrumGenerator::operator=(const OpenMS::SvmTheoreticalSpectrumGenerator&)' 197 | SvmTheoreticalSpectrumGenerator & operator=(const SvmTheoreticalSpectrumGenerator & tsg); | ^~~~~~~~ In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/DataProcessing.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/MetaInfoDescription.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/DataArrays.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:40: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Peak1D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.h:39: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.h:42: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGenerator.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.h:43: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:87:35: note: by 'OpenMS::TheoreticalSpectrumGenerator& OpenMS::TheoreticalSpectrumGenerator::operator=(const OpenMS::TheoreticalSpectrumGenerator&)' 87 | TheoreticalSpectrumGenerator& operator=(const TheoreticalSpectrumGenerator& tsg); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGenerator.h:197:39: note: by 'OpenMS::SvmTheoreticalSpectrumGenerator& OpenMS::SvmTheoreticalSpectrumGenerator::operator=(const OpenMS::SvmTheoreticalSpectrumGenerator&)' 197 | SvmTheoreticalSpectrumGenerator & operator=(const SvmTheoreticalSpectrumGenerator & tsg); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.h:105:46: note: by 'OpenMS::SvmTheoreticalSpectrumGeneratorTrainer& OpenMS::SvmTheoreticalSpectrumGeneratorTrainer::operator=(const OpenMS::SvmTheoreticalSpectrumGeneratorTrainer&)' 105 | SvmTheoreticalSpectrumGeneratorTrainer & operator=(const SvmTheoreticalSpectrumGeneratorTrainer & tsg); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h:70:18: note: by 'OpenMS::Normalizer& OpenMS::Normalizer::operator=(const OpenMS::Normalizer&)' 70 | Normalizer & operator=(const Normalizer & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NLargest.h:72:16: note: by 'OpenMS::NLargest& OpenMS::NLargest::operator=(const OpenMS::NLargest&)' 72 | NLargest & operator=(const NLargest & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SqrtMower.h:66:17: note: by 'OpenMS::SqrtMower& OpenMS::SqrtMower::operator=(const OpenMS::SqrtMower&)' 66 | SqrtMower & operator=(const SqrtMower & source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Peak1D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGenerator.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.h:44: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:87:35: note: by 'OpenMS::TheoreticalSpectrumGenerator& OpenMS::TheoreticalSpectrumGenerator::operator=(const OpenMS::TheoreticalSpectrumGenerator&)' 87 | TheoreticalSpectrumGenerator& operator=(const TheoreticalSpectrumGenerator& tsg); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGenerator.h:197:39: note: by 'OpenMS::SvmTheoreticalSpectrumGenerator& OpenMS::SvmTheoreticalSpectrumGenerator::operator=(const OpenMS::SvmTheoreticalSpectrumGenerator&)' 197 | SvmTheoreticalSpectrumGenerator & operator=(const SvmTheoreticalSpectrumGenerator & tsg); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/Tagger.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/Tagger.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/Tagger.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/Tagger.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/Tagger.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/TheoreticalSpectrumGenerator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/TheoreticalSpectrumGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/TheoreticalSpectrumGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/TheoreticalSpectrumGenerator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/TheoreticalSpectrumGenerator.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/TheoreticalSpectrumGenerator.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:87:35: note: by 'OpenMS::TheoreticalSpectrumGenerator& OpenMS::TheoreticalSpectrumGenerator::operator=(const OpenMS::TheoreticalSpectrumGenerator&)' 87 | TheoreticalSpectrumGenerator& operator=(const TheoreticalSpectrumGenerator& tsg); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63, from /usr/include/c++/13/map:62, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/Residue.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.h:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.h:90:42: note: by 'OpenMS::TheoreticalSpectrumGeneratorXLMS& OpenMS::TheoreticalSpectrumGeneratorXLMS::operator=(const OpenMS::TheoreticalSpectrumGeneratorXLMS&)' 90 | TheoreticalSpectrumGeneratorXLMS & operator=(const TheoreticalSpectrumGeneratorXLMS & tsg); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/WeightWrapper.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/WeightWrapper.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/WeightWrapper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/WeightWrapper.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/WeightWrapper.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/FineIsotopePatternGenerator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem 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-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/FineIsotopePatternGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/FineIsotopePatternGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/FineIsotopePatternGenerator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/FineIsotopePatternGenerator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopePatternGenerator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopePatternGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopePatternGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopePatternGenerator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopePatternGenerator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabet.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabet.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabet.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabet.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabet.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSElement.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSElement.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSElement.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSElement.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSElement.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsoSpecWrapper.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsoSpecWrapper.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsoSpecWrapper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsoSpecWrapper.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsoSpecWrapper.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSIsotopeDistribution.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSIsotopeDistribution.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSIsotopeDistribution.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSIsotopeDistribution.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSIsotopeDistribution.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/Weights.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/Weights.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/Weights.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/Weights.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/Weights.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabetTextParser.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabetTextParser.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabetTextParser.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabetTextParser.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabetTextParser.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/RealMassDecomposer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/RealMassDecomposer.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/RealMassDecomposer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/RealMassDecomposer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/RealMassDecomposer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/MassDecomposition.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/MassDecomposition.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/MassDecomposition.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/MassDecomposition.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/MassDecomposition.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.h:107:34: note: by 'OpenMS::MassDecompositionAlgorithm& OpenMS::MassDecompositionAlgorithm::operator=(const OpenMS::MassDecompositionAlgorithm&)' 107 | MassDecompositionAlgorithm & operator=(const MassDecompositionAlgorithm & rhs); | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataWritingConsumer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataWritingConsumer.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataWritingConsumer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataWritingConsumer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/DATAACCESS/MSDataWritingConsumer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLHandler.h:43, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataWritingConsumer.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/DATAACCESS/MSDataWritingConsumer.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/XMLFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzMLFile.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataWritingConsumer.h:39: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzTabFile.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataTransformingConsumer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataTransformingConsumer.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataTransformingConsumer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataTransformingConsumer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/DATAACCESS/MSDataTransformingConsumer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataAggregatingConsumer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataAggregatingConsumer.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataAggregatingConsumer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataAggregatingConsumer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/DATAACCESS/MSDataAggregatingConsumer.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/DATAACCESS/MSDataAggregatingConsumer.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Peak1D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataAggregatingConsumer.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/DATAACCESS/MSDataAggregatingConsumer.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:61:23: note: by 'OpenMS::LinearResampler& OpenMS::LinearResampler::operator=(const OpenMS::LinearResampler&)' 61 | class OPENMS_DLLAPI LinearResampler : | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h:57:23: note: by 'OpenMS::LinearResamplerAlign::operator=' 57 | class OPENMS_DLLAPI LinearResamplerAlign : | ^~~~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataChainingConsumer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataChainingConsumer.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataChainingConsumer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataChainingConsumer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/DATAACCESS/MSDataChainingConsumer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataCachedConsumer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataCachedConsumer.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataCachedConsumer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataCachedConsumer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/DATAACCESS/MSDataCachedConsumer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataStoringConsumer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataStoringConsumer.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataStoringConsumer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataStoringConsumer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/DATAACCESS/MSDataStoringConsumer.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataStoringConsumer.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/DATAACCESS/MSDataStoringConsumer.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/NoopMSDataConsumer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/NoopMSDataConsumer.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/NoopMSDataConsumer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/NoopMSDataConsumer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/DATAACCESS/NoopMSDataConsumer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataSqlConsumer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataSqlConsumer.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataSqlConsumer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataSqlConsumer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/DATAACCESS/MSDataSqlConsumer.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataSqlConsumer.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/DATAACCESS/MSDataSqlConsumer.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SiriusFragmentAnnotation.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SiriusFragmentAnnotation.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SiriusFragmentAnnotation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SiriusFragmentAnnotation.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/DATAACCESS/SiriusFragmentAnnotation.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzTabFile.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/DATAACCESS/SiriusMzTabWriter.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/DATAACCESS/SiriusFragmentAnnotation.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Peak1D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/DATAACCESS/SiriusFragmentAnnotation.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/DATAACCESS/SiriusFragmentAnnotation.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SwathFileConsumer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SwathFileConsumer.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SwathFileConsumer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SwathFileConsumer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/DATAACCESS/SwathFileConsumer.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLHandler.h:43, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataWritingConsumer.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/DATAACCESS/SwathFileConsumer.h:43, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/DATAACCESS/SwathFileConsumer.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/DATAACCESS/SwathFileConsumer.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h:46, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathHelper.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/DATAACCESS/SwathFileConsumer.h:47: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:159:17: note: by 'OpenMS::DIAScoring& OpenMS::DIAScoring::operator=(const OpenMS::DIAScoring&)' 159 | DIAScoring& operator=(const DIAScoring& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:43: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h:83:19: note: by 'OpenMS::SONARScoring& OpenMS::SONARScoring::operator=(const OpenMS::SONARScoring&)' 83 | SONARScoring& operator=(const SONARScoring& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:44: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:90:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 90 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:90:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:109:31: note: by 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' 109 | virtual LevMarqFitter1D & operator=(const LevMarqFitter1D & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:109:31: warning: 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:62:26: note: by 'virtual OpenMS::EmgFitter1D& OpenMS::EmgFitter1D::operator=(const OpenMS::EmgFitter1D&)' 62 | virtual EmgFitter1D& operator=(const EmgFitter1D& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:26: note: by 'OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/Fmake[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' EATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:68:16: note: by 'OpenMS::EmgModel& OpenMS::EmgModel::operator=(const OpenMS::EmgModel&)' 68 | EmgModel & operator=(const EmgModel & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:70:23: note: by 'OpenMS::GaussFilter& OpenMS::GaussFilter::operator=(const OpenMS::GaussFilter&)' 70 | class OPENMS_DLLAPI GaussFilter : | ^~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:89:23: note: by 'OpenMS::MRMFeatureFinderScoring& OpenMS::MRMFeatureFinderScoring::operator=(const OpenMS::MRMFeatureFinderScoring&)' 89 | class OPENMS_DLLAPI MRMFeatureFinderScoring : | ^~~~~~~~~~~~~~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/AcqusHandler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/AcqusHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/AcqusHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/AcqusHandler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/AcqusHandler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SiriusMzTabWriter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SiriusMzTabWriter.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SiriusMzTabWriter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SiriusMzTabWriter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/DATAACCESS/SiriusMzTabWriter.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzTabFile.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/DATAACCESS/SiriusMzTabWriter.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/DATAACCESS/SiriusMzTabWriter.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/DATAACCESS/SiriusMzTabWriter.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/CachedMzMLHandler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/CachedMzMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/CachedMzMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/CachedMzMLHandler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/CachedMzMLHandler.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/CachedMzMLHandler.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/HANDLERS/CachedMzMLHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/CachedMzMLHandler.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/FidHandler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/FidHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/FidHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/FidHandler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/FidHandler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ConsensusXMLHandler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ConsensusXMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ConsensusXMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ConsensusXMLHandler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/ConsensusXMLHandler.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/HANDLERS/ConsensusXMLHandler.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/ConsensusXMLHandler.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/HANDLERS/XMLHandler.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/HANDLERS/ConsensusXMLHandler.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/FeatureXMLHandler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/FeatureXMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/FeatureXMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/FeatureXMLHandler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/FeatureXMLHandler.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/FeatureXMLHandler.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DRange.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/OPTIONS/FeatureFileOptions.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/HANDLERS/FeatureXMLHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/FeatureXMLHandler.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/IndexedMzMLHandler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/IndexedMzMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/IndexedMzMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/IndexedMzMLHandler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/IndexedMzMLHandler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/IndexedMzMLDecoder.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/IndexedMzMLDecoder.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/IndexedMzMLDecoder.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/IndexedMzMLDecoder.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/IndexedMzMLDecoder.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MascotXMLHandler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MascotXMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MascotXMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MascotXMLHandler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/MascotXMLHandler.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/SpectrumMetaDataLookup.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/HANDLERS/MascotXMLHandler.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/MascotXMLHandler.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63, from /usr/include/c++/13/map:62, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/AASequence.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/HANDLERS/MascotXMLHandler.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzDataHandler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzDataHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzDataHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzDataHandler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/MzDataHandler.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/HANDLERS/MzDataHandler.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/MzDataHandler.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/HANDLERS/MzDataHandler.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzIdentMLHandler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzIdentMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzIdentMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzIdentMLHandler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/MzIdentMLHandler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzIdentMLDOMHandler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzIdentMLDOMHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzIdentMLDOMHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzIdentMLDOMHandler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/MzIdentMLDOMHandler.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLHelper.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/MzIdentMLDOMHandler.cpp:42: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ListUtils.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/ControlledVocabulary.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/HANDLERS/MzIdentMLDOMHandler.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/MzIdentMLDOMHandler.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLHandler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLHandler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/MzMLHandler.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLHandler.h:43, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/MzMLHandler.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Helpers.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLHandler.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzQuantMLHandler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzQuantMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzQuantMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzQuantMLHandler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/MzQuantMLHandler.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/MSQuantifications.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/HANDLERS/MzQuantMLHandler.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/MzQuantMLHandler.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/HANDLERS/XMLHandler.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/HANDLERS/MzQuantMLHandler.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLHandlerHelper.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLHandlerHelper.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLHandlerHelper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLHandlerHelper.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/MzMLHandlerHelper.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSpectrumDecoder.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSpectrumDecoder.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSpectrumDecoder.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSpectrumDecoder.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/MzMLSpectrumDecoder.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSqliteSwathHandler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSqliteSwathHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSqliteSwathHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSqliteSwathHandler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/MzMLSqliteSwathHandler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSqliteHandler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSqliteHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSqliteHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSqliteHandler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/MzMLSqliteHandler.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLSqliteHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/MzMLSqliteHandler.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzXMLHandler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzXMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzXMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzXMLHandler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/MzXMLHandler.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/HANDLERS/MzXMLHandler.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/MzXMLHandler.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DRange.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/HANDLERS/MzXMLHandler.h:39: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/PTMXMLHandler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/PTMXMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/PTMXMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/PTMXMLHandler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/PTMXMLHandler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ParamXMLHandler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ParamXMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ParamXMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ParamXMLHandler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/ParamXMLHandler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ToolDescriptionHandler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ToolDescriptionHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ToolDescriptionHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ToolDescriptionHandler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/ToolDescriptionHandler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/UnimodXMLHandler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/UnimodXMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/UnimodXMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/UnimodXMLHandler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/UnimodXMLHandler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/TraMLHandler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/TraMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/TraMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/TraMLHandler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/TraMLHandler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/XMLHandler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/XMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/XMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/XMLHandler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/XMLHandler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/XMLValidator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/XMLValidator.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/XMLValidator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/XMLValidator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/VALIDATORS/XMLValidator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzMLValidator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzMLValidator.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzMLValidator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzMLValidator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/VALIDATORS/MzMLValidator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzDataValidator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzDataValidator.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzDataValidator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzDataValidator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/VALIDATORS/MzDataValidator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/XQuestResultXMLHandler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/XQuestResultXMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/XQuestResultXMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/XQuestResultXMLHandler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/XQuestResultXMLHandler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/SemanticValidator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/SemanticValidator.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/SemanticValidator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/SemanticValidator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/VALIDATORS/SemanticValidator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzIdentMLValidator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzIdentMLValidator.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzIdentMLValidator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzIdentMLValidator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/VALIDATORS/MzIdentMLValidator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzQuantMLValidator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzQuantMLValidator.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzQuantMLValidator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzQuantMLValidator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/VALIDATORS/MzQuantMLValidator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OPTIONS/FeatureFileOptions.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OPTIONS/FeatureFileOptions.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/OPTIONS/FeatureFileOptions.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/OPTIONS/FeatureFileOptions.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/OPTIONS/FeatureFileOptions.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/TraMLValidator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/TraMLValidator.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/TraMLValidator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/TraMLValidator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/VALIDATORS/TraMLValidator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OPTIONS/PeakFileOptions.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OPTIONS/PeakFileOptions.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/OPTIONS/PeakFileOptions.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/OPTIONS/PeakFileOptions.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/OPTIONS/PeakFileOptions.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/AbsoluteQuantitationStandardsFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/AbsoluteQuantitationStandardsFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/AbsoluteQuantitationStandardsFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/AbsoluteQuantitationStandardsFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/AbsoluteQuantitationStandardsFile.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/AbsoluteQuantitationStandards.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/AbsoluteQuantitationStandardsFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/AbsoluteQuantitationStandardsFile.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/StringListUtils.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/TextFile.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/CsvFile.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/AbsoluteQuantitationStandardsFile.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/Base64.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/Base64.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/Base64.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/Base64.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/Base64.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/Bzip2Ifstream.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/Bzip2Ifstream.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/Bzip2Ifstream.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/Bzip2Ifstream.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/Bzip2Ifstream.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/Bzip2InputStream.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem 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-Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/Bzip2InputStream.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/Bzip2InputStream.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/Bzip2InputStream.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/Bzip2InputStream.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/AbsoluteQuantitationMethodFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/AbsoluteQuantitationMethodFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/AbsoluteQuantitationMethodFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/AbsoluteQuantitationMethodFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/AbsoluteQuantitationMethodFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/CachedMzML.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/CachedMzML.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/CachedMzML.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/CachedMzML.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/CachedMzML.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/CachedMzML.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/CachedMzML.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/CompressedInputSource.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/CompressedInputSource.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/CompressedInputSource.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/CompressedInputSource.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/CompressedInputSource.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/CVMappingFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/CVMappingFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/CVMappingFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/CVMappingFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/CVMappingFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ChromeleonFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ChromeleonFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/ChromeleonFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/ChromeleonFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/ChromeleonFile.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/ChromeleonFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/ChromeleonFile.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/ChromeleonFile.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ConsensusXMLFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ConsensusXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/ConsensusXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/ConsensusXMLFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/ConsensusXMLFile.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/ConsensusXMLFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/ConsensusXMLFile.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DRange.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/ConsensusXMLFile.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/CsvFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/CsvFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/CsvFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/CsvFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/CsvFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DTA2DFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DTA2DFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DTA2DFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DTA2DFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/DTA2DFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DTAFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DTAFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DTAFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DTAFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/DTAFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ControlledVocabulary.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ControlledVocabulary.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/ControlledVocabulary.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/ControlledVocabulary.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/ControlledVocabulary.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ExperimentalDesignFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ExperimentalDesignFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/ExperimentalDesignFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/ExperimentalDesignFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/ExperimentalDesignFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/EDTAFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/EDTAFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/EDTAFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/EDTAFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/EDTAFile.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/EDTAFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/EDTAFile.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/EDTAFile.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FASTAFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FASTAFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/FASTAFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/FASTAFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/FASTAFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FeatureXMLFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FeatureXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/FeatureXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/FeatureXMLFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/FeatureXMLFile.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/FeatureXMLFile.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DRange.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/OPTIONS/FeatureFileOptions.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/FeatureXMLFile.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/FeatureXMLFile.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FileTypes.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FileTypes.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/FileTypes.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/FileTypes.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/FileTypes.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FileHandler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FileHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/FileHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/FileHandler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/FileHandler.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/ConsensusXMLFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/FileHandler.cpp:42: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/FileTypes.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/FileHandler.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/FileHandler.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MascotGenericFile.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/FileHandler.cpp:44: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MascotGenericFile.h:62:23: note: by 'OpenMS::MascotGenericFile& OpenMS::MascotGenericFile::operator=(const OpenMS::MascotGenericFile&)' 62 | class OPENMS_DLLAPI MascotGenericFile : | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/FileHandler.cpp:46: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MSPFile.h:72:15: note: by 'OpenMS::MSPFile& OpenMS::MSPFile::operator=(const OpenMS::MSPFile&)' 72 | MSPFile & operator=(const MSPFile & rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/FileHandler.cpp:47: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MSPGenericFile.h:67:23: note: by 'OpenMS::MSPGenericFile& OpenMS::MSPGenericFile::operator=(const OpenMS::MSPGenericFile&)' 67 | class OPENMS_DLLAPI MSPGenericFile : | ^~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/GzipIfstream.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/GzipIfstream.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/GzipIfstream.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/GzipIfstream.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/GzipIfstream.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 42%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/GzipInputStream.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/GzipInputStream.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/GzipInputStream.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/GzipInputStream.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/GzipInputStream.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 42%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HDF5Connector.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HDF5Connector.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HDF5Connector.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HDF5Connector.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HDF5Connector.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/GNPSMGFFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/GNPSMGFFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/GNPSMGFFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/GNPSMGFFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/GNPSMGFFile.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/GNPSMGFFile.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/GNPSMGFFile.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/GNPSMGFFile.h:43:23: note: by 'OpenMS::GNPSMGFFile::operator=' 43 | class OPENMS_DLLAPI GNPSMGFFile : | ^~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/GNPSMGFFile.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:73:35: note: by 'OpenMS::BinnedSpectrumCompareFunctor& OpenMS::BinnedSpectrumCompareFunctor::operator=(const OpenMS::BinnedSpectrumCompareFunctor&)' 73 | BinnedSpectrumCompareFunctor& operator=(const BinnedSpectrumCompareFunctor& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.h:73:34: note: by 'OpenMS::BinnedSpectralContrastAngle& OpenMS::BinnedSpectralContrastAngle::operator=(const OpenMS::BinnedSpectralContrastAngle&)' 73 | BinnedSpectralContrastAngle& operator=(const BinnedSpectralContrastAngle& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/GNPSMGFFile.cpp:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:42: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h:84:25: note: by 'OpenMS::SpectrumAlignment& OpenMS::SpectrumAlignment::operator=(const OpenMS::SpectrumAlignment&)' 84 | SpectrumAlignment & operator=(const SpectrumAlignment & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:75:11: note: by 'OpenMS::SpectraMerger::SpectraDistance_::operator=' 75 | class SpectraDistance_ : | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:146:20: note: by 'OpenMS::SpectraMerger& OpenMS::SpectraMerger::operator=(const OpenMS::SpectraMerger&)' 146 | SpectraMerger& operator=(const SpectraMerger& source); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/ConsensusXMLFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/GNPSMGFFile.cpp:41: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 42%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/IBSpectraFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/IBSpectraFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/IBSpectraFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/IBSpectraFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/IBSpectraFile.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/IBSpectraFile.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/StringListUtils.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/IBSpectraFile.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/IBSpectraFile.cpp:36: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/IBSpectraFile.cpp:43: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:55:23: note: by 'OpenMS::IsobaricQuantitationMethod& OpenMS::IsobaricQuantitationMethod::operator=(const OpenMS::IsobaricQuantitationMethod&)' 55 | class OPENMS_DLLAPI IsobaricQuantitationMethod : | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/IBSpectraFile.cpp:44: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.h:60:38: note: by 'OpenMS::ItraqFourPlexQuantitationMethod& OpenMS::ItraqFourPlexQuantitationMethod::operator=(const OpenMS::ItraqFourPlexQuantitationMethod&)' 60 | ItraqFourPlexQuantitationMethod& operator=(const ItraqFourPlexQuantitationMethod& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/IBSpectraFile.cpp:45: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.h:62:40: note: by 'OpenMS::ItraqEightPlexQuantitationMethod& OpenMS::ItraqEightPlexQuantitationMethod::operator=(const OpenMS::ItraqEightPlexQuantitationMethod&)' 62 | ItraqEightPlexQuantitationMethod & operator=(const ItraqEightPlexQuantitationMethod& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/IBSpectraFile.cpp:46: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.h:62:36: note: by 'OpenMS::TMTSixPlexQuantitationMethod& OpenMS::TMTSixPlexQuantitationMethod::operator=(const OpenMS::TMTSixPlexQuantitationMethod&)' 62 | TMTSixPlexQuantitationMethod & operator=(const TMTSixPlexQuantitationMethod& rhs); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 42%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/IdXMLFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/IdXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/IdXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/IdXMLFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/IdXMLFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 42%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/IndexedMzMLFileLoader.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/IndexedMzMLFileLoader.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/IndexedMzMLFileLoader.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/IndexedMzMLFileLoader.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/IndexedMzMLFileLoader.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/OnDiscMSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/IndexedMzMLFileLoader.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DRange.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/IndexedMzMLFileLoader.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/IndexedMzMLFileLoader.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 42%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/InspectInfile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/InspectInfile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/InspectInfile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/InspectInfile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/InspectInfile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 42%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/InspectOutfile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/InspectOutfile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/InspectOutfile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/InspectOutfile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/InspectOutfile.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/InspectOutfile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/InspectOutfile.cpp:42: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/LogStream.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/InspectOutfile.cpp:41: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 42%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/KroenikFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/KroenikFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/KroenikFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/KroenikFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/KroenikFile.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/KroenikFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/KroenikFile.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/KroenikFile.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 42%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/LibSVMEncoder.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/LibSVMEncoder.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/LibSVMEncoder.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/LibSVMEncoder.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/LibSVMEncoder.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 42%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MRMFeaturePickerFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MRMFeaturePickerFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MRMFeaturePickerFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MRMFeaturePickerFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MRMFeaturePickerFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 42%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MS2File.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MS2File.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MS2File.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MS2File.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MS2File.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 42%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSNumpressCoder.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSNumpressCoder.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MSNumpressCoder.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MSNumpressCoder.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MSNumpressCoder.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 42%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MRMFeatureQCFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MRMFeatureQCFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MRMFeatureQCFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MRMFeatureQCFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MRMFeatureQCFile.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureQC.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MRMFeatureQCFile.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MRMFeatureQCFile.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/StringListUtils.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/TextFile.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/CsvFile.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MRMFeatureQCFile.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 44%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSPFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSPFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MSPFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MSPFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MSPFile.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MSPFile.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MSPFile.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MSPFile.h:72:15: note: by 'OpenMS::MSPFile& OpenMS::MSPFile::operator=(const OpenMS::MSPFile&)' 72 | MSPFile & operator=(const MSPFile & rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MSPFile.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 44%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSPGenericFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSPGenericFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MSPGenericFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MSPGenericFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MSPGenericFile.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MSPGenericFile.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MSPGenericFile.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MSPGenericFile.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MSPGenericFile.h:67:23: note: by 'OpenMS::MSPGenericFile& OpenMS::MSPGenericFile::operator=(const OpenMS::MSPGenericFile&)' 67 | class OPENMS_DLLAPI MSPGenericFile : | ^~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 44%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotInfile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotInfile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MascotInfile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MascotInfile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MascotInfile.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MascotInfile.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MascotInfile.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 44%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSstatsFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSstatsFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MSstatsFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MSstatsFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MSstatsFile.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MSstatsFile.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MSstatsFile.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ExperimentalDesign.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MSstatsFile.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 44%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotRemoteQuery.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotRemoteQuery.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MascotRemoteQuery.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MascotRemoteQuery.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MascotRemoteQuery.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MascotRemoteQuery.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MascotRemoteQuery.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MascotRemoteQuery.h:139:38: note: by 'OpenMS::MascotRemoteQuery& OpenMS::MascotRemoteQuery::operator=(const OpenMS::MascotRemoteQuery&)' 139 | OPENMS_DLLAPI MascotRemoteQuery& operator=(const MascotRemoteQuery& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MascotRemoteQuery.cpp: In member function 'void OpenMS::MascotRemoteQuery::login()': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MascotRemoteQuery.cpp:184:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 184 | loginbytes.append(boundary_string); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtCore/qobject.h:47, from /usr/include/qt5/QtCore/QObject:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MascotRemoteQuery.h:38: /usr/include/qt5/QtCore/qstring.h:1511:20: note: declared here 1511 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MascotRemoteQuery.cpp:188:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 188 | loginbytes.append(String(param_.getValue("username").toString()).toQString()); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtCore/qstring.h:1511:20: note: declared here 1511 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MascotRemoteQuery.cpp:190:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 190 | loginbytes.append(boundary_string); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /usr/include/qt5/QtCore/qstring.h:1511:20: note: declared here 1511 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MascotRemoteQuery.cpp:194:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 194 | loginbytes.append(String(param_.getValue("password").toString()).toQString()); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtCore/qstring.h:1511:20: note: declared here 1511 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MascotRemoteQuery.cpp:196:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 196 | loginbytes.append(boundary_string); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /usr/include/qt5/QtCore/qstring.h:1511:20: note: declared here 1511 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MascotRemoteQuery.cpp:201:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 201 | loginbytes.append(boundary_string); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /usr/include/qt5/QtCore/qstring.h:1511:20: note: declared here 1511 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MascotRemoteQuery.cpp:206:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 206 | loginbytes.append(boundary_string); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /usr/include/qt5/QtCore/qstring.h:1511:20: note: declared here 1511 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MascotRemoteQuery.cpp:211:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 211 | loginbytes.append(boundary_string); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /usr/include/qt5/QtCore/qstring.h:1511:20: note: declared here 1511 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MascotRemoteQuery.cpp:216:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 216 | loginbytes.append(boundary_string); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /usr/include/qt5/QtCore/qstring.h:1511:20: note: declared here 1511 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MascotRemoteQuery.cpp:221:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 221 | loginbytes.append(boundary_string); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /usr/include/qt5/QtCore/qstring.h:1511:20: note: declared here 1511 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MascotRemoteQuery.cpp:226:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 226 | loginbytes.append(boundary_string); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /usr/include/qt5/QtCore/qstring.h:1511:20: note: declared here 1511 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MascotRemoteQuery.cpp:231:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 231 | loginbytes.append("--" + boundary + "--\r\n"); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtCore/qstring.h:1511:20: note: declared here 1511 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MascotRemoteQuery.cpp: In member function 'void OpenMS::MascotRemoteQuery::execQuery()': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MascotRemoteQuery.cpp:357:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 357 | querybytes.append("--" + boundary + "--\n"); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtCore/qstring.h:1511:20: note: declared here 1511 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MascotRemoteQuery.cpp:362:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 362 | querybytes.append("--" + boundary + "--\n"); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtCore/qstring.h:1511:20: note: declared here 1511 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 44%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotGenericFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotGenericFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MascotGenericFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MascotGenericFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MascotGenericFile.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MascotGenericFile.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MascotGenericFile.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MascotGenericFile.h:62:23: note: by 'OpenMS::MascotGenericFile& OpenMS::MascotGenericFile::operator=(const OpenMS::MascotGenericFile&)' 62 | class OPENMS_DLLAPI MascotGenericFile : | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MascotGenericFile.cpp:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/FileTypes.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/FileHandler.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MascotGenericFile.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 44%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotXMLFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MascotXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MascotXMLFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MascotXMLFile.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/SpectrumMetaDataLookup.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/HANDLERS/MascotXMLHandler.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MascotXMLFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MascotXMLFile.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63, from /usr/include/c++/13/map:62, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/AASequence.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MascotXMLFile.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 44%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MsInspectFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MsInspectFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MsInspectFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MsInspectFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MsInspectFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 44%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzDataFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzDataFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MzDataFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MzDataFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MzDataFile.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzDataFile.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MzDataFile.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/StringListUtils.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SYSTEM/File.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MzDataFile.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 44%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzIdentMLFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzIdentMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MzIdentMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MzIdentMLFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MzIdentMLFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 44%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzMLFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MzMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MzMLFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MzMLFile.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLHandler.h:43, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MzMLFile.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/XMLFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzMLFile.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MzMLFile.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 44%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzQuantMLFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzQuantMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MzQuantMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MzQuantMLFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MzQuantMLFile.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/MSQuantifications.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzQuantMLFile.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MzQuantMLFile.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/FileTypes.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/FileHandler.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MzQuantMLFile.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 44%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzQCFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzQCFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MzQCFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MzQCFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MzQCFile.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/TIC.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MzQCFile.cpp:42: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/QCBase.h:132:20: warning: identifier 'requires' is a keyword in C++20 [-Wc++20-compat] 132 | virtual Status requires() const = 0; | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzQCFile.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MzQCFile.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 46%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzTabBase.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzTabBase.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MzTabBase.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MzTabBase.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MzTabBase.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 46%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzTab.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzTab.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MzTab.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MzTab.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MzTab.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MzTab.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/SVOutStream.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzTab.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MzTab.cpp:47: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::FilterPeptideEvidences(EvidenceFilter&, std::vector&) [with EvidenceFilter = DigestionFilter]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:486:68: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:728:35: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::DigestionFilter]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 728 | std::not1(filter)); | ~~~~~~~~~^~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1138:24: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1147:26: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMetaValue]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:572:26: required from 'static void OpenMS::IDFilter::keepMatchingItemsUnroll(IDContainer&, const Predicate&) [with IDContainer = std::vector; Predicate = HasMetaValue]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1210:30: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMetaValue]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1358:31: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/opmake[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' enms/include/OpenMS/FILTERING/ID/IDFilter.h:1368:35: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 46%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzTabM.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzTabM.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MzTabM.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MzTabM.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MzTabM.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzTabM.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MzTabM.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ListUtils.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/ControlledVocabulary.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MzTabM.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 46%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzTabMFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzTabMFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MzTabMFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MzTabMFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MzTabMFile.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzTabFile.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MzTabMFile.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MzTabMFile.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 46%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzXMLFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MzXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MzXMLFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MzXMLFile.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/HANDLERS/MzXMLHandler.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MzXMLFile.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/XMLFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzXMLFile.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MzXMLFile.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 46%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OMSFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OMSFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/OMSFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/OMSFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/OMSFile.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/OMSFile.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/OMSFile.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Feature.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 46%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzTabFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzTabFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MzTabFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MzTabFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MzTabFile.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzTabFile.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MzTabFile.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/SVOutStream.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzTab.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 46%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OMSFileLoad.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OMSFileLoad.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/OMSFileLoad.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/OMSFileLoad.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/OMSFileLoad.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/OMSFileLoad.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/OMSFileLoad.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Feature.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 46%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OMSSACSVFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OMSSACSVFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/OMSSACSVFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/OMSSACSVFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/OMSSACSVFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 46%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OMSFileStore.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OMSFileStore.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/OMSFileStore.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/OMSFileStore.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/OMSFileStore.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/OMSFileStore.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/OMSFileStore.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Feature.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 46%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OMSSAXMLFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OMSSAXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/OMSSAXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/OMSSAXMLFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/OMSSAXMLFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 46%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OSWFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OSWFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/OSWFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/OSWFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/OSWFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 46%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ParamCTDFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ParamCTDFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/ParamCTDFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/ParamCTDFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/ParamCTDFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 48%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PTMXMLFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PTMXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/PTMXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/PTMXMLFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/PTMXMLFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 48%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ParamXMLFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ParamXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/ParamXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/ParamXMLFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/ParamXMLFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 48%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PeakTypeEstimator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PeakTypeEstimator.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/PeakTypeEstimator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/PeakTypeEstimator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/PeakTypeEstimator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 48%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PepNovoInfile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PepNovoInfile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/PepNovoInfile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/PepNovoInfile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/PepNovoInfile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 48%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PepNovoOutfile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PepNovoOutfile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/PepNovoOutfile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/PepNovoOutfile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/PepNovoOutfile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 48%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PepXMLFileMascot.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PepXMLFileMascot.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/PepXMLFileMascot.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/PepXMLFileMascot.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/PepXMLFileMascot.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 48%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PercolatorInfile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PercolatorInfile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/PercolatorInfile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/PercolatorInfile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/PercolatorInfile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 48%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PepXMLFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PepXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/PepXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/PepXMLFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/PepXMLFile.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/SpectrumMetaDataLookup.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/PepXMLFile.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/PepXMLFile.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63, from /usr/include/c++/13/map:62, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/AASequence.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/PepXMLFile.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 48%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ProtXMLFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ProtXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/ProtXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/ProtXMLFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/ProtXMLFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 48%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PercolatorOutfile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PercolatorOutfile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/PercolatorOutfile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/PercolatorOutfile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/PercolatorOutfile.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/PercolatorOutfile.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/PercolatorOutfile.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 48%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SequestInfile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SequestInfile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/SequestInfile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/SequestInfile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/SequestInfile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 48%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/QcMLFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/QcMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/QcMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/QcMLFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/QcMLFile.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/QcMLFile.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/QcMLFile.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/HANDLERS/XMLHandler.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/QcMLFile.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SequestOutfile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SequestOutfile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/SequestOutfile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/SequestOutfile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/SequestOutfile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SqliteConnector.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SqliteConnector.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/SqliteConnector.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/SqliteConnector.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/SqliteConnector.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SqMassFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SqMassFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/SqMassFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/SqMassFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/SqMassFile.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/SqMassFile.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/SqMassFile.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SpecArrayFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SpecArrayFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/SpecArrayFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/SpecArrayFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/SpecArrayFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SVOutStream.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SVOutStream.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/SVOutStream.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/SVOutStream.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/SVOutStream.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/TextFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/TextFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/TextFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/TextFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/TextFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ToolDescriptionFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ToolDescriptionFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/ToolDescriptionFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/ToolDescriptionFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/ToolDescriptionFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/TraMLFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/TraMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/TraMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/TraMLFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/TraMLFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SwathFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SwathFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/SwathFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/SwathFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/SwathFile.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/SwathFile.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/SwathMap.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/SwathFile.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/SwathFile.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h:46, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathHelper.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/DATAACCESS/SwathFileConsumer.h:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/SwathFile.cpp:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:159:17: note: by 'OpenMS::DIAScoring& OpenMS::DIAScoring::operator=(const OpenMS::DIAScoring&)' 159 | DIAScoring& operator=(const DIAScoring& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:43: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h:83:19: note: by 'OpenMS::SONARScoring& OpenMS::SONARScoring::operator=(const OpenMS::SONARScoring&)' 83 | SONARScoring& operator=(const SONARScoring& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:44: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:90:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 90 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:90:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:109:31: note: by 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' 109 | virtual LevMarqFitter1D & operator=(const LevMarqFitter1D & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:109:31: warning: 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:62:26: note: by 'virtual OpenMS::EmgFitter1D& OpenMS::EmgFitter1D::operator=(const OpenMS::EmgFitter1D&)' 62 | virtual EmgFitter1D& operator=(const EmgFitter1D& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:26: note: by 'OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' 88 | InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:68:16: note: by 'OpenMS::EmgModel& OpenMS::EmgModel::operator=(const OpenMS::EmgModel&)' 68 | EmgModel & operator=(const EmgModel & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:70:23: note: by 'OpenMS::GaussFilter& OpenMS::GaussFilter::operator=(const OpenMS::GaussFilter&)' 70 | class OPENMS_DLLAPI GaussFilter : | ^~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:89:23: note: by 'OpenMS::MRMFeatureFinderScoring& OpenMS::MRMFeatureFinderScoring::operator=(const OpenMS::MRMFeatureFinderScoring&)' 89 | class OPENMS_DLLAPI MRMFeatureFinderScoring : | ^~~~~~~~~~~~~~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/TransformationXMLFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/TransformationXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/TransformationXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/TransformationXMLFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/TransformationXMLFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/UnimodXMLFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/UnimodXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/UnimodXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/UnimodXMLFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/UnimodXMLFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XMassFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XMassFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/XMassFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/XMassFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/XMassFile.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/XMassFile.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/XMassFile.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/HANDLERS/AcqusHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/XMassFile.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 51%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XMLFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/XMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/XMLFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/XMLFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/TriqlerFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/TriqlerFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/TriqlerFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/TriqlerFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/TriqlerFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/TriqlerFile.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/TriqlerFile.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ExperimentalDesign.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/TriqlerFile.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/IDScoreSwitcherAlgorithm.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/TriqlerFile.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/IDScoreSwitcherAlgorithm.h:48:23: note: by 'OpenMS::IDScoreSwitcherAlgorithm::operator=' 48 | class OPENMS_DLLAPI IDScoreSwitcherAlgorithm: | ^~~~~~~~~~~~~~~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 51%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XQuestResultXMLFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XQuestResultXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/XQuestResultXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/XQuestResultXMLFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/XQuestResultXMLFile.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/XQuestResultXMLFile.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/XQuestResultXMLFile.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/FileTypes.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/FileHandler.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/XQuestResultXMLFile.cpp:34: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 51%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XTandemXMLFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XTandemXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/XTandemXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/XTandemXMLFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/XTandemXMLFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 51%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ZlibCompression.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ZlibCompression.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/ZlibCompression.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/ZlibCompression.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/ZlibCompression.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 51%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XTandemInfile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XTandemInfile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/XTandemInfile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/XTandemInfile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/XTandemInfile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 51%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/IONMOBILITY/IMTypes.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/IONMOBILITY/IMTypes.cpp.o -MF CMakeFiles/OpenMS.dir/source/IONMOBILITY/IMTypes.cpp.o.d -o CMakeFiles/OpenMS.dir/source/IONMOBILITY/IMTypes.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/IONMOBILITY/IMTypes.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/IONMOBILITY/IMTypes.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/IONMOBILITY/IMTypes.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/IONMOBILITY/IMTypes.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 51%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/IONMOBILITY/FAIMSHelper.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/IONMOBILITY/FAIMSHelper.cpp.o -MF CMakeFiles/OpenMS.dir/source/IONMOBILITY/FAIMSHelper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/IONMOBILITY/FAIMSHelper.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/IONMOBILITY/FAIMSHelper.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/IONMOBILITY/FAIMSHelper.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63, from /usr/include/c++/13/set:62, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/IONMOBILITY/FAIMSHelper.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/IONMOBILITY/FAIMSHelper.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 51%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/IONMOBILITY/IMDataConverter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/IONMOBILITY/IMDataConverter.cpp.o -MF CMakeFiles/OpenMS.dir/source/IONMOBILITY/IMDataConverter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/IONMOBILITY/IMDataConverter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/IONMOBILITY/IMDataConverter.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/IONMOBILITY/IMDataConverter.cpp:42: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/IONMOBILITY/IMDataConverter.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/IONMOBILITY/IMDataConverter.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 51%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.h:84:31: note: by 'OpenMS::IsobaricChannelExtractor& OpenMS::IsobaricChannelExtractor::operator=(const OpenMS::IsobaricChannelExtractor&)' 84 | IsobaricChannelExtractor& operator=(const IsobaricChannelExtractor& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:55:23: note: by 'OpenMS::IsobaricQuantitationMethod& OpenMS::IsobaricQuantitationMethod::operator=(const OpenMS::IsobaricQuantitationMethod&)' 55 | class OPENMS_DLLAPI IsobaricQuantitationMethod : | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.h:62:36: note: by 'OpenMS::TMTTenPlexQuantitationMethod& OpenMS::TMTTenPlexQuantitationMethod::operator=(const OpenMS::TMTTenPlexQuantitationMethod&)' 62 | TMTTenPlexQuantitationMethod & operator=(const TMTTenPlexQuantitationMethod& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.h:62:39: note: by 'OpenMS::TMTElevenPlexQuantitationMethod& OpenMS::TMTElevenPlexQuantitationMethod::operator=(const OpenMS::TMTElevenPlexQuantitationMethod&)' 62 | TMTElevenPlexQuantitationMethod & operator=(const TMTElevenPlexQuantitationMethod& rhs); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 51%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricNormalizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricNormalizer.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricNormalizer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricNormalizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/IsobaricNormalizer.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/IsobaricNormalizer.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:55:23: note: by 'OpenMS::IsobaricQuantitationMethod& OpenMS::IsobaricQuantitationMethod::operator=(const OpenMS::IsobaricQuantitationMethod&)' 55 | class OPENMS_DLLAPI IsobaricQuantitationMethod : | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/IsobaricNormalizer.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricNormalizer.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/IsobaricNormalizer.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 51%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:55:23: note: by 'OpenMS::IsobaricQuantitationMethod& OpenMS::IsobaricQuantitationMethod::operator=(const OpenMS::IsobaricQuantitationMethod&)' 55 | class OPENMS_DLLAPI IsobaricQuantitationMethod : | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.cpp:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Matrix.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 51%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantifierStatistics.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantifierStatistics.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantifierStatistics.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantifierStatistics.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantifierStatistics.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 53%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:55:23: note: by 'OpenMS::IsobaricQuantitationMethod& OpenMS::IsobaricQuantitationMethod::operator=(const OpenMS::IsobaricQuantitationMethod&)' 55 | class OPENMS_DLLAPI IsobaricQuantitationMethod : | ^~~~~~~~~~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 51%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantifier.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantifier.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantifier.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantifier.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantifier.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantifier.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantifier.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantifier.h:66:25: note: by 'OpenMS::IsobaricQuantifier& OpenMS::IsobaricQuantifier::operator=(const OpenMS::IsobaricQuantifier&)' 66 | IsobaricQuantifier& operator=(const IsobaricQuantifier& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantifier.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantifier.cpp:41: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:55:23: note: by 'OpenMS::IsobaricQuantitationMethod& OpenMS::IsobaricQuantitationMethod::operator=(const OpenMS::IsobaricQuantitationMethod&)' 55 | class OPENMS_DLLAPI IsobaricQuantitationMethod : | ^~~~~~~~~~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 53%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqConstants.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqConstants.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqConstants.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqConstants.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/ItraqConstants.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 53%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:55:23: note: by 'OpenMS::IsobaricQuantitationMethod& OpenMS::IsobaricQuantitationMethod::operator=(const OpenMS::IsobaricQuantitationMethod&)' 55 | class OPENMS_DLLAPI IsobaricQuantitationMethod : | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.h:62:40: note: by 'OpenMS::ItraqEightPlexQuantitationMethod& OpenMS::ItraqEightPlexQuantitationMethod::operator=(const OpenMS::ItraqEightPlexQuantitationMethod&)' 62 | ItraqEightPlexQuantitationMethod & operator=(const ItraqEightPlexQuantitationMethod& rhs); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 53%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:55:23: note: by 'OpenMS::IsobaricQuantitationMethod& OpenMS::IsobaricQuantitationMethod::operator=(const OpenMS::IsobaricQuantitationMethod&)' 55 | class OPENMS_DLLAPI IsobaricQuantitationMethod : | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.h:60:38: note: by 'OpenMS::ItraqFourPlexQuantitationMethod& OpenMS::ItraqFourPlexQuantitationMethod::operator=(const OpenMS::ItraqFourPlexQuantitationMethod&)' 60 | ItraqFourPlexQuantitationMethod& operator=(const ItraqFourPlexQuantitationMethod& rhs); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 53%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsotopeLabelingMDVs.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsotopeLabelingMDVs.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsotopeLabelingMDVs.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsotopeLabelingMDVs.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/IsotopeLabelingMDVs.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsotopeLabelingMDVs.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/IsotopeLabelingMDVs.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsotopeLabelingMDVs.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsotopeLabelingMDVs.h:48:23: note: by 'OpenMS::IsotopeLabelingMDVs& OpenMS::IsotopeLabelingMDVs::operator=(const OpenMS::IsotopeLabelingMDVs&)' 48 | class OPENMS_DLLAPI IsotopeLabelingMDVs : | ^~~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 53%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:49:21: note: by 'OpenMS::KDTreeFeatureMaps& OpenMS::KDTreeFeatureMaps::operator=(const OpenMS::KDTreeFeatureMaps&)' 49 | class OPENMS_DLLAPI KDTreeFeatureMaps : public DefaultParamHandler | ^~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 53%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/KDTreeFeatureNode.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/KDTreeFeatureNode.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/KDTreeFeatureNode.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/KDTreeFeatureNode.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/KDTreeFeatureNode.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/KDTreeFeatureNode.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:49:21: note: by 'OpenMS::KDTreeFeatureMaps& OpenMS::KDTreeFeatureMaps::operator=(const OpenMS::KDTreeFeatureMaps&)' 49 | class OPENMS_DLLAPI KDTreeFeatureMaps : public DefaultParamHandler | ^~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 53%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ProteinInference.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ProteinInference.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ProteinInference.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ProteinInference.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/ProteinInference.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/ProteinInference.cpp:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Peak2D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ProteinInference.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/ProteinInference.cpp:36: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 53%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.h:53:23: note: by 'OpenMS::PeptideAndProteinQuant& OpenMS::PeptideAndProteinQuant::operator=(const OpenMS::PeptideAndProteinQuant&)' 53 | class OPENMS_DLLAPI PeptideAndProteinQuant : | ^~~~~~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 53%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ProteinResolver.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ProteinResolver.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ProteinResolver.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ProteinResolver.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/ProteinResolver.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ProteinResolver.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/ProteinResolver.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ProteinResolver.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ProteinResolver.h:67:23: note: by 'OpenMS::ProteinResolver& OpenMS::ProteinResolver::operator=(const OpenMS::ProteinResolver&)' 67 | ProteinResolver & operator=(const ProteinResolver & rhs); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 53%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:55:23: note: by 'OpenMS::IsobaricQuantitationMethod& OpenMS::IsobaricQuantitationMethod::operator=(const OpenMS::IsobaricQuantitationMethod&)' 55 | class OPENMS_DLLAPI IsobaricQuantitationMethod : | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.h:62:40: note: by 'OpenMS::TMTSixteenPlexQuantitationMethod& OpenMS::TMTSixteenPlexQuantitationMethod::operator=(const OpenMS::TMTSixteenPlexQuantitationMethod&)' 62 | TMTSixteenPlexQuantitationMethod & operator=(const TMTSixteenPlexQuantitationMethod& rhs); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 53%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.h:53:23: note: by 'OpenMS::PeptideAndProteinQuant& OpenMS::PeptideAndProteinQuant::operator=(const OpenMS::PeptideAndProteinQuant&)' 53 | class OPENMS_DLLAPI PeptideAndProteinQuant : | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.h:41: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ProteinResolver.h:67:23: note: by 'OpenMS::ProteinResolver& OpenMS::ProteinResolver::operator=(const OpenMS::ProteinResolver&)' 67 | ProteinResolver & operator=(const ProteinResolver & rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.h:79:38: note: by 'OpenMS::QuantitativeExperimentalDesign& OpenMS::QuantitativeExperimentalDesign::operator=(const OpenMS::QuantitativeExperimentalDesign&)' 79 | QuantitativeExperimentalDesign & operator=(const QuantitativeExperimentalDesign &); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 53%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:55:23: note: by 'OpenMS::IsobaricQuantitationMethod& OpenMS::IsobaricQuantitationMethod::operator=(const OpenMS::IsobaricQuantitationMethod&)' 55 | class OPENMS_DLLAPI IsobaricQuantitationMethod : | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.h:62:39: note: by 'OpenMS::TMTElevenPlexQuantitationMethod& OpenMS::TMTElevenPlexQuantitationMethod::operator=(const OpenMS::TMTElevenPlexQuantitationMethod&)' 62 | TMTElevenPlexQuantitationMethod & operator=(const TMTElevenPlexQuantitationMethod& rhs); | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 55%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:55:23: note: by 'OpenMS::IsobaricQuantitationMethod& OpenMS::IsobaricQuantitationMethod::operator=(const OpenMS::IsobaricQuantitationMethod&)' 55 | class OPENMS_DLLAPI IsobaricQuantitationMethod : | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.h:62:36: note: by 'OpenMS::TMTSixPlexQuantitationMethod& OpenMS::TMTSixPlexQuantitationMethod::operator=(const OpenMS::TMTSixPlexQuantitationMethod&)' 62 | TMTSixPlexQuantitationMethod & operator=(const TMTSixPlexQuantitationMethod& rhs); | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 55%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:55:23: note: by 'OpenMS::IsobaricQuantitationMethod& OpenMS::IsobaricQuantitationMethod::operator=(const OpenMS::IsobaricQuantitationMethod&)' 55 | class OPENMS_DLLAPI IsobaricQuantitationMethod : | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.h:62:36: note: by 'OpenMS::TMTTenPlexQuantitationMethod& OpenMS::TMTTenPlexQuantitationMethod::operator=(const OpenMS::TMTTenPlexQuantitationMethod&)' 62 | TMTTenPlexQuantitationMethod & operator=(const TMTTenPlexQuantitationMethod& rhs); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 55%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/AbsoluteQuantitationMethod.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/AbsoluteQuantitationMethod.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/AbsoluteQuantitationMethod.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/AbsoluteQuantitationMethod.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/AbsoluteQuantitationMethod.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 55%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/SEQUENCE/NeedlemanWunsch.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/SEQUENCE/NeedlemanWunsch.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/SEQUENCE/NeedlemanWunsch.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/SEQUENCE/NeedlemanWunsch.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/SEQUENCE/NeedlemanWunsch.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 55%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/SVM/SimpleSVM.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/SVM/SimpleSVM.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/SVM/SimpleSVM.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/SVM/SimpleSVM.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/SVM/SimpleSVM.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/SVM/SimpleSVM.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/SVM/SimpleSVM.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/SVM/SimpleSVM.h:65:23: note: by 'OpenMS::SimpleSVM& OpenMS::SimpleSVM::operator=(const OpenMS::SimpleSVM&)' 65 | class OPENMS_DLLAPI SimpleSVM : | ^~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 55%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/AbsoluteQuantitation.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/AbsoluteQuantitation.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/AbsoluteQuantitation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/AbsoluteQuantitation.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/AbsoluteQuantitation.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/AbsoluteQuantitation.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/AbsoluteQuantitation.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/AbsoluteQuantitation.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/AbsoluteQuantitation.h:84:23: note: by 'OpenMS::AbsoluteQuantitation& OpenMS::AbsoluteQuantitation::operator=(const OpenMS::AbsoluteQuantitation&)' 84 | class OPENMS_DLLAPI AbsoluteQuantitation : | ^~~~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 55%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/SVM/SVMWrapper.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/SVM/SVMWrapper.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/SVM/SVMWrapper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/SVM/SVMWrapper.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/SVM/SVMWrapper.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 55%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:97:23: note: by 'OpenMS::BaseGroupFinder& OpenMS::BaseGroupFinder::operator=(const OpenMS::BaseGroupFinder&)' 97 | BaseGroupFinder & operator=(const BaseGroupFinder &); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/SimplePairFinder.h:81:23: note: by 'OpenMS::SimplePairFinder& OpenMS::SimplePairFinder::operator=(const OpenMS::SimplePairFinder&)' 81 | class OPENMS_DLLAPI SimplePairFinder : | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/LabeledPairFinder.h:114:25: note: by 'OpenMS::LabeledPairFinder& OpenMS::LabeledPairFinder::operator=(const OpenMS::LabeledPairFinder&)' 114 | LabeledPairFinder & operator=(const LabeledPairFinder & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/StablePairFinder.h:109:23: note: by 'OpenMS::StablePairFinder& OpenMS::StablePairFinder::operator=(const OpenMS::StablePairFinder&)' 109 | class OPENMS_DLLAPI StablePairFinder : | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/CLUSTERING/HashGrid.h:95:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 95 | public std::iterator | ^~~~~~~~ /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/CLUSTERING/HashGrid.h:173:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 173 | public std::iterator | ^~~~~~~~ /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h:42: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureDistance.h:109:23: note: by 'OpenMS::FeatureDistance& OpenMS::FeatureDistance::operator=(const OpenMS::FeatureDistance&)' 109 | FeatureDistance & operator=(const FeatureDistance & other); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h:104:23: note: by 'OpenMS::QTClusterFinder& OpenMS::QTClusterFinder::operator=(const OpenMS::QTClusterFinder&)' 104 | class OPENMS_DLLAPI QTClusterFinder : | ^~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 55%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/BaseSuperimposer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/BaseSuperimposer.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/BaseSuperimposer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/BaseSuperimposer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/BaseSuperimposer.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/BaseSuperimposer.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationDescription.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:42: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:86:23: note: by 'OpenMS::BaseSuperimposer& OpenMS::BaseSuperimposer::operator=(const OpenMS::BaseSuperimposer&)' 86 | BaseSuperimposer& operator=(const BaseSuperimposer&); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 55%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmThreshold.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmThreshold.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmThreshold.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmThreshold.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmThreshold.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmThreshold.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmThreshold.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 55%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmQuantile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmQuantile.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmQuantile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmQuantile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmQuantile.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmQuantile.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmQuantile.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 55%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmMedian.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmMedian.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmMedian.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmMedian.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmMedian.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmMedian.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmMedian.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 57%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureDistance.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureDistance.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureDistance.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureDistance.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/FeatureDistance.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureDistance.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/FeatureDistance.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureDistance.h:109:23: note: by 'OpenMS::FeatureDistance& OpenMS::FeatureDistance::operator=(const OpenMS::FeatureDistance&)' 109 | FeatureDistance & operator=(const FeatureDistance & other); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 57%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:120:32: note: by 'OpenMS::FeatureGroupingAlgorithm& OpenMS::FeatureGroupingAlgorithm::operator=(const OpenMS::FeatureGroupingAlgorithm&)' 120 | FeatureGroupingAlgorithm & operator=(const FeatureGroupingAlgorithm &); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.h:88:39: note: by 'OpenMS::FeatureGroupingAlgorithmLabeled& OpenMS::FeatureGroupingAlgorithmLabeled::operator=(const OpenMS::FeatureGroupingAlgorithmLabeled&)' 88 | FeatureGroupingAlgorithmLabeled & operator=(const FeatureGroupingAlgorithmLabeled &); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/LabeledPairFinder.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:97:23: note: by 'OpenMS::BaseGroupFinder& OpenMS::BaseGroupFinder::operator=(const OpenMS::BaseGroupFinder&)' 97 | BaseGroupFinder & operator=(const BaseGroupFinder &); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/LabeledPairFinder.h:114:25: note: by 'OpenMS::LabeledPairFinder& OpenMS::LabeledPairFinder::operator=(const OpenMS::LabeledPairFinder&)' 114 | LabeledPairFinder & operator=(const LabeledPairFinder & source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 57%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:120:32: note: by 'OpenMS::FeatureGroupingAlgorithm& OpenMS::FeatureGroupingAlgorithm::operator=(const OpenMS::FeatureGroupingAlgorithm&)' 120 | FeatureGroupingAlgorithm & operator=(const FeatureGroupingAlgorithm &); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.h:88:39: note: by 'OpenMS::FeatureGroupingAlgorithmLabeled& OpenMS::FeatureGroupingAlgorithmLabeled::operator=(const OpenMS::FeatureGroupingAlgorithmLabeled&)' 88 | FeatureGroupingAlgorithmLabeled & operator=(const FeatureGroupingAlgorithmLabeled &); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.h:136:41: note: by 'OpenMS::FeatureGroupingAlgorithmUnlabeled& OpenMS::FeatureGroupingAlgorithmUnlabeled::operator=(const OpenMS::FeatureGroupingAlgorithmUnlabeled&)' 136 | FeatureGroupingAlgorithmUnlabeled & operator=(const FeatureGroupingAlgorithmUnlabeled &); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.h:99:33: note: by 'OpenMS::FeatureGroupingAlgorithmQT& OpenMS::FeatureGroupingAlgorithmQT::operator=(const OpenMS::FeatureGroupingAlgorithmQT&)' 99 | FeatureGroupingAlgorithmQT& operator=(const FeatureGroupingAlgorithmQT&); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp:41: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:49:21: note: by 'OpenMS::KDTreeFeatureMaps& OpenMS::KDTreeFeatureMaps::operator=(const OpenMS::KDTreeFeatureMaps&)' 49 | class OPENMS_DLLAPI KDTreeFeatureMaps : public DefaultParamHandler | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.h:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureDistance.h:109:23: note: by 'OpenMS::FeatureDistance& OpenMS::FeatureDistance::operator=(const OpenMS::FeatureDistance&)' 109 | FeatureDistance & operator=(const FeatureDistance & other); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.h:224:33: note: by 'OpenMS::FeatureGroupingAlgorithmKD& OpenMS::FeatureGroupingAlgorithmKD::operator=(const OpenMS::FeatureGroupingAlgorithmKD&)' 224 | FeatureGroupingAlgorithmKD& operator=(const FeatureGroupingAlgorithmKD&); | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 57%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:120:32: note: by 'OpenMS::FeatureGroupingAlgorithm& OpenMS::FeatureGroupingAlgorithm::operator=(const OpenMS::FeatureGroupingAlgorithm&)' 120 | FeatureGroupingAlgorithm & operator=(const FeatureGroupingAlgorithm &); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.h:99:33: note: by 'OpenMS::FeatureGroupingAlgorithmQT& OpenMS::FeatureGroupingAlgorithmQT::operator=(const OpenMS::FeatureGroupingAlgorithmQT&)' 99 | FeatureGroupingAlgorithmQT& operator=(const FeatureGroupingAlgorithmQT&); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:97:23: note: by 'OpenMS::BaseGroupFinder& OpenMS::BaseGroupFinder::operator=(const OpenMS::BaseGroupFinder&)' 97 | BaseGroupFinder & operator=(const BaseGroupFinder &); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/CLUSTERING/HashGrid.h:95:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 95 | public std::iterator | ^~~~~~~~ /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/CLUSTERING/HashGrid.h:173:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 173 | public std::iterator | ^~~~~~~~ /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h:42: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureDistance.h:109:23: note: by 'OpenMS::FeatureDistance& OpenMS::FeatureDistance::operator=(const OpenMS::FeatureDistance&)' 109 | FeatureDistance & operator=(const FeatureDistance & other); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h:104:23: note: by 'OpenMS::QTClusterFinder& OpenMS::QTClusterFinder::operator=(const OpenMS::QTClusterFinder&)' 104 | class OPENMS_DLLAPI QTClusterFinder : | ^~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 57%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:120:32: note: by 'OpenMS::FeatureGroupingAlgorithm& OpenMS::FeatureGroupingAlgorithm::operator=(const OpenMS::FeatureGroupingAlgorithm&)' 120 | FeatureGroupingAlgorithm & operator=(const FeatureGroupingAlgorithm &); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.h:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:49:21: note: by 'OpenMS::KDTreeFeatureMaps& OpenMS::KDTreeFeatureMaps::operator=(const OpenMS::KDTreeFeatureMaps&)' 49 | class OPENMS_DLLAPI KDTreeFeatureMaps : public DefaultParamHandler | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.h:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureDistance.h:109:23: note: by 'OpenMS::FeatureDistance& OpenMS::FeatureDistance::operator=(const OpenMS::FeatureDistance&)' 109 | FeatureDistance & operator=(const FeatureDistance & other); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.h:224:33: note: by 'OpenMS::FeatureGroupingAlgorithmKD& OpenMS::FeatureGroupingAlgorithmKD::operator=(const OpenMS::FeatureGroupingAlgorithmKD&)' 224 | FeatureGroupingAlgorithmKD& operator=(const FeatureGroupingAlgorithmKD&); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 57%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureMapping.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureMapping.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureMapping.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureMapping.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/FeatureMapping.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/FeatureMapping.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Peak2D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:49:21: note: by 'OpenMS::KDTreeFeatureMaps& OpenMS::KDTreeFeatureMaps::operator=(const OpenMS::KDTreeFeatureMaps&)' 49 | class OPENMS_DLLAPI KDTreeFeatureMaps : public DefaultParamHandler | ^~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 57%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:120:32: note: by 'OpenMS::FeatureGroupingAlgorithm& OpenMS::FeatureGroupingAlgorithm::operator=(const OpenMS::FeatureGroupingAlgorithm&)' 120 | FeatureGroupingAlgorithm & operator=(const FeatureGroupingAlgorithm &); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.h:136:41: note: by 'OpenMS::FeatureGroupingAlgorithmUnlabeled& OpenMS::FeatureGroupingAlgorithmUnlabeled::operator=(const OpenMS::FeatureGroupingAlgorithmUnlabeled&)' 136 | FeatureGroupingAlgorithmUnlabeled & operator=(const FeatureGroupingAlgorithmUnlabeled &); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/StablePairFinder.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:97:23: note: by 'OpenMS::BaseGroupFinder& OpenMS::BaseGroupFinder::operator=(const OpenMS::BaseGroupFinder&)' 97 | BaseGroupFinder & operator=(const BaseGroupFinder &); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/StablePairFinder.h:109:23: note: by 'OpenMS::StablePairFinder& OpenMS::StablePairFinder::operator=(const OpenMS::StablePairFinder&)' 109 | class OPENMS_DLLAPI StablePairFinder : | ^~~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 57%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/LabeledPairFinder.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/LabeledPairFinder.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/LabeledPairFinder.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/LabeledPairFinder.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/LabeledPairFinder.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/LabeledPairFinder.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/LabeledPairFinder.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:97:23: note: by 'OpenMS::BaseGroupFinder& OpenMS::BaseGroupFinder::operator=(const OpenMS::BaseGroupFinder&)' 97 | BaseGroupFinder & operator=(const BaseGroupFinder &); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/LabeledPairFinder.h:114:25: note: by 'OpenMS::LabeledPairFinder& OpenMS::LabeledPairFinder::operator=(const OpenMS::LabeledPairFinder&)' 114 | LabeledPairFinder & operator=(const LabeledPairFinder & source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 57%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationDescription.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.h:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.h:363:42: note: by 'OpenMS::MapAlignmentAlgorithmIdentification& OpenMS::MapAlignmentAlgorithmIdentification::operator=(const OpenMS::MapAlignmentAlgorithmIdentification&)' 363 | MapAlignmentAlgorithmIdentification& operator=(const MapAlignmentAlgorithmIdentification&); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 57%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmKD.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmKD.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmKD.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmKD.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmKD.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmKD.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmKD.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:49:21: note: by 'OpenMS::KDTreeFeatureMaps& OpenMS::KDTreeFeatureMaps::operator=(const OpenMS::KDTreeFeatureMaps&)' 49 | class OPENMS_DLLAPI KDTreeFeatureMaps : public DefaultParamHandler | ^~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 57%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/StablePairFinder.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationDescription.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:97:23: note: by 'OpenMS::BaseGroupFinder& OpenMS::BaseGroupFinder::operator=(const OpenMS::BaseGroupFinder&)' 97 | BaseGroupFinder & operator=(const BaseGroupFinder &); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/StablePairFinder.h:109:23: note: by 'OpenMS::StablePairFinder& OpenMS::StablePairFinder::operator=(const OpenMS::StablePairFinder&)' 109 | class OPENMS_DLLAPI StablePairFinder : | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.h:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:86:23: note: by 'OpenMS::BaseSuperimposer& OpenMS::BaseSuperimposer::operator=(const OpenMS::BaseSuperimposer&)' 86 | BaseSuperimposer& operator=(const BaseSuperimposer&); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.h:66:23: note: by 'OpenMS::PoseClusteringAffineSuperimposer& OpenMS::PoseClusteringAffineSuperimposer::operator=(const OpenMS::PoseClusteringAffineSuperimposer&)' 66 | class OPENMS_DLLAPI PoseClusteringAffineSuperimposer : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.h:110:42: note: by 'OpenMS::MapAlignmentAlgorithmPoseClustering& OpenMS::MapAlignmentAlgorithmPoseClustering::operator=(const OpenMS::MapAlignmentAlgorithmPoseClustering&)' 110 | MapAlignmentAlgorithmPoseClustering& operator=(const MapAlignmentAlgorithmPoseClustering&); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 57%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.h:72:46: note: by 'OpenMS::MapAlignmentAlgorithmSpectrumAlignment& OpenMS::MapAlignmentAlgorithmSpectrumAlignment::operator=(const OpenMS::MapAlignmentAlgorithmSpectrumAlignment&)' 72 | MapAlignmentAlgorithmSpectrumAlignment & operator=(const MapAlignmentAlgorithmSpectrumAlignment &); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationDescription.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 57%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.h:363:42: note: by 'OpenMS::MapAlignmentAlgorithmIdentification& OpenMS::MapAlignmentAlgorithmIdentification::operator=(const OpenMS::MapAlignmentAlgorithmIdentification&)' 363 | MapAlignmentAlgorithmIdentification& operator=(const MapAlignmentAlgorithmIdentification&); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.h:179:38: note: by 'OpenMS::MapAlignmentAlgorithmTreeGuided& OpenMS::MapAlignmentAlgorithmTreeGuided::operator=(const OpenMS::MapAlignmentAlgorithmTreeGuided&)' 179 | MapAlignmentAlgorithmTreeGuided& operator=(const MapAlignmentAlgorithmTreeGuided&); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.cpp:42: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h:49: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:73:35: note: by 'OpenMS::BinnedSpectrumCompareFunctor& OpenMS::BinnedSpectrumCompareFunctor::operator=(const OpenMS::BinnedSpectrumCompareFunctor&)' 73 | BinnedSpectrumCompareFunctor& operator=(const BinnedSpectrumCompareFunctor& source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmPrecision.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmPrecision.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmPrecision.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmPrecision.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmPrecision.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmPrecision.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmPrecision.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmRecall.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmRecall.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmRecall.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmRecall.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmRecall.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmRecall.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmRecall.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationDescription.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:42: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:86:23: note: by 'OpenMS::BaseSuperimposer& OpenMS::BaseSuperimposer::operator=(const OpenMS::BaseSuperimposer&)' 86 | BaseSuperimposer& operator=(const BaseSuperimposer&); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.h:66:23: note: by 'OpenMS::PoseClusteringAffineSuperimposer& OpenMS::PoseClusteringAffineSuperimposer::operator=(const OpenMS::PoseClusteringAffineSuperimposer&)' 66 | class OPENMS_DLLAPI PoseClusteringAffineSuperimposer : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/BASELINE/MorphologicalFilter.h:60:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 60 | public std::iterator | ^~~~~~~~ /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/BASELINE/MorphologicalFilter.h:160:23: note: by 'OpenMS::MorphologicalFilter& OpenMS::MorphologicalFilter::operator=(const OpenMS::MorphologicalFilter&)' 160 | class OPENMS_DLLAPI MorphologicalFilter : | ^~~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationDescription.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:42: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:86:23: note: by 'OpenMS::BaseSuperimposer& OpenMS::BaseSuperimposer::operator=(const OpenMS::BaseSuperimposer&)' 86 | BaseSuperimposer& operator=(const BaseSuperimposer&); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.h:64:23: note: by 'OpenMS::PoseClusteringShiftSuperimposer& OpenMS::PoseClusteringShiftSuperimposer::operator=(const OpenMS::PoseClusteringShiftSuperimposer&)' 64 | class OPENMS_DLLAPI PoseClusteringShiftSuperimposer : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/BASELINE/MorphologicalFilter.h:60:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 60 | public std::iterator | ^~~~~~~~ /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/BASELINE/MorphologicalFilter.h:160:23: note: by 'OpenMS::MorphologicalFilter& OpenMS::MorphologicalFilter::operator=(const OpenMS::MorphologicalFilter&)' 160 | class OPENMS_DLLAPI MorphologicalFilter : | ^~~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/SimplePairFinder.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/SimplePairFinder.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/SimplePairFinder.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/SimplePairFinder.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/SimplePairFinder.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/SimplePairFinder.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/SimplePairFinder.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:97:23: note: by 'OpenMS::BaseGroupFinder& OpenMS::BaseGroupFinder::operator=(const OpenMS::BaseGroupFinder&)' 97 | BaseGroupFinder & operator=(const BaseGroupFinder &); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/SimplePairFinder.h:81:23: note: by 'OpenMS::SimplePairFinder& OpenMS::SimplePairFinder::operator=(const OpenMS::SimplePairFinder&)' 81 | class OPENMS_DLLAPI SimplePairFinder : | ^~~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/QTClusterFinder.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/QTClusterFinder.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/QTClusterFinder.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/QTClusterFinder.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/QTClusterFinder.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/QTClusterFinder.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:97:23: note: by 'OpenMS::BaseGroupFinder& OpenMS::BaseGroupFinder::operator=(const OpenMS::BaseGroupFinder&)' 97 | BaseGroupFinder & operator=(const BaseGroupFinder &); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/CLUSTERING/HashGrid.h:95:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 95 | public std::iterator | ^~~~~~~~ /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/CLUSTERING/HashGrid.h:173:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 173 | public std::iterator | ^~~~~~~~ /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h:42: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureDistance.h:109:23: note: by 'OpenMS::FeatureDistance& OpenMS::FeatureDistance::operator=(const OpenMS::FeatureDistance&)' 109 | FeatureDistance & operator=(const FeatureDistance & other); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h:104:23: note: by 'OpenMS::QTClusterFinder& OpenMS::QTClusterFinder::operator=(const OpenMS::QTClusterFinder&)' 104 | class OPENMS_DLLAPI QTClusterFinder : | ^~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationDescription.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationDescription.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationDescription.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationDescription.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/TransformationDescription.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/StablePairFinder.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/StablePairFinder.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/StablePairFinder.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/StablePairFinder.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/StablePairFinder.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/StablePairFinder.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/StablePairFinder.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:97:23: note: by 'OpenMS::BaseGroupFinder& OpenMS::BaseGroupFinder::operator=(const OpenMS::BaseGroupFinder&)' 97 | BaseGroupFinder & operator=(const BaseGroupFinder &); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/StablePairFinder.h:109:23: note: by 'OpenMS::StablePairFinder& OpenMS::StablePairFinder::operator=(const OpenMS::StablePairFinder&)' 109 | class OPENMS_DLLAPI StablePairFinder : | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/StablePairFinder.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureDistance.h:109:23: note: by 'OpenMS::FeatureDistance& OpenMS::FeatureDistance::operator=(const OpenMS::FeatureDistance&)' 109 | FeatureDistance & operator=(const FeatureDistance & other); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModel.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModel.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModel.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelBSpline.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelBSpline.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelBSpline.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelBSpline.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModelBSpline.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelLowess.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelLowess.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelLowess.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelLowess.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModelLowess.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelLinear.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelLinear.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelLinear.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelLinear.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModelLinear.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelInterpolated.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelInterpolated.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelInterpolated.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelInterpolated.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModelInterpolated.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/FeatureDeconvolution.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/FeatureDeconvolution.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/FeatureDeconvolution.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/FeatureDeconvolution.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/DECHARGING/FeatureDeconvolution.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DECHARGING/FeatureDeconvolution.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/DECHARGING/FeatureDeconvolution.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Feature.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DECHARGING/FeatureDeconvolution.h:44: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DECHARGING/FeatureDeconvolution.h:80:27: note: by 'OpenMS::FeatureDeconvolution& OpenMS::FeatureDeconvolution::operator=(const OpenMS::FeatureDeconvolution&)' 80 | FeatureDeconvolution& operator=(const FeatureDeconvolution& source); | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Feature.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.h:44: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.h:80:37: note: by 'OpenMS::MetaboliteFeatureDeconvolution& OpenMS::MetaboliteFeatureDeconvolution::operator=(const OpenMS::MetaboliteFeatureDeconvolution&)' 80 | MetaboliteFeatureDeconvolution& operator=(const MetaboliteFeatureDeconvolution& source); | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/ILPDCWrapper.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/ILPDCWrapper.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/ILPDCWrapper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/ILPDCWrapper.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/DECHARGING/ILPDCWrapper.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/DECHARGING/ILPDCWrapper.cpp:42: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Map.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DECHARGING/ILPDCWrapper.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/DECHARGING/ILPDCWrapper.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AhoCorasickAmbiguous.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AhoCorasickAmbiguous.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AhoCorasickAmbiguous.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AhoCorasickAmbiguous.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/AhoCorasickAmbiguous.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AScore.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AScore.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AScore.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AScore.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/AScore.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/AScore.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/AScore.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/AScore.h:72:23: note: by 'OpenMS::AScore& OpenMS::AScore::operator=(const OpenMS::AScore&)' 72 | class OPENMS_DLLAPI AScore: public DefaultParamHandler | ^~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/AScore.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:87:35: note: by 'OpenMS::TheoreticalSpectrumGenerator& OpenMS::TheoreticalSpectrumGenerator::operator=(const OpenMS::TheoreticalSpectrumGenerator&)' 87 | TheoreticalSpectrumGenerator& operator=(const TheoreticalSpectrumGenerator& tsg); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AccurateMassSearchEngine.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AccurateMassSearchEngine.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AccurateMassSearchEngine.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AccurateMassSearchEngine.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/AccurateMassSearchEngine.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MassTrace.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/AccurateMassSearchEngine.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/AccurateMassSearchEngine.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Peak2D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MassTrace.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/AccurateMassSearchEngine.h:44: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/AccurateMassSearchEngine.h:206:23: note: by 'OpenMS::AccurateMassSearchEngine& OpenMS::AccurateMassSearchEngine::operator=(const OpenMS::AccurateMassSearchEngine&)' 206 | class OPENMS_DLLAPI AccurateMassSearchEngine : | ^~~~~~~~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/BasicProteinInferenceAlgorithm.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/BasicProteinInferenceAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/BasicProteinInferenceAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/BasicProteinInferenceAlgorithm.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/BasicProteinInferenceAlgorithm.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/BasicProteinInferenceAlgorithm.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/BasicProteinInferenceAlgorithm.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/BasicProteinInferenceAlgorithm.h:36: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/BasicProteinInferenceAlgorithm.h:60:23: note: by 'OpenMS::BasicProteinInferenceAlgorithm::operator=' 60 | class OPENMS_DLLAPI BasicProteinInferenceAlgorithm : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/BasicProteinInferenceAlgorithm.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/IDScoreSwitcherAlgorithm.h:48:23: note: by 'OpenMS::IDScoreSwitcherAlgorithm::operator=' 48 | class OPENMS_DLLAPI IDScoreSwitcherAlgorithm: | ^~~~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/BasicProteinInferenceAlgorithm.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::FilterPeptideEvidences(EvidenceFilter&, std::vector&) [with EvidenceFilter = DigestionFilter]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:486:68: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:728:35: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::DigestionFilter]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 728 | std::not1(filter)); | ~~~~~~~~~^~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1138:24: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1147:26: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMetaValue]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:572:26: required from 'static void OpenMS::IDFilter::keepMatchingItemsUnroll(IDContainer&, const Predicate&) [with IDContainer = std::vector; Predicate = HasMetaValue]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1210:30: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMetaValue]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Contamake[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' iner&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1358:31: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1368:35: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithm.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithm.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithm.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithm.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:146:27: note: by 'OpenMS::ConsensusIDAlgorithm& OpenMS::ConsensusIDAlgorithm::operator=(const OpenMS::ConsensusIDAlgorithm&)' 146 | ConsensusIDAlgorithm& operator=(const ConsensusIDAlgorithm&); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithm.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::FilterPeptideEvidences(EvidenceFilter&, std::vector&) [with EvidenceFilter = DigestionFilter]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:486:68: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:728:35: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::DigestionFilter]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 728 | std::not1(filter)); | ~~~~~~~~~^~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1138:24: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1147:26: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMetaValue]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:572:26: required from 'static void OpenMS::IDFilter::keepMatchingItemsUnroll(IDContainer&, const Predicate&) [with IDContainer = std::vector; Predicate = HasMetaValue]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1210:30: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMetaValue]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1358:31: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1368:35: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmAverage.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmAverage.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmAverage.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmAverage.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmAverage.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmAverage.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmAverage.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:146:27: note: by 'OpenMS::ConsensusIDAlgorithm& OpenMS::ConsensusIDAlgorithm::operator=(const OpenMS::ConsensusIDAlgorithm&)' 146 | ConsensusIDAlgorithm& operator=(const ConsensusIDAlgorithm&); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.h:86:35: note: by 'OpenMS::ConsensusIDAlgorithmIdentity& OpenMS::ConsensusIDAlgorithmIdentity::operator=(const OpenMS::ConsensusIDAlgorithmIdentity&)' 86 | ConsensusIDAlgorithmIdentity& operator=(const ConsensusIDAlgorithmIdentity&); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmAverage.h:60:34: note: by 'OpenMS::ConsensusIDAlgorithmAverage& OpenMS::ConsensusIDAlgorithmAverage::operator=(const OpenMS::ConsensusIDAlgorithmAverage&)' 60 | ConsensusIDAlgorithmAverage& operator=(const ConsensusIDAlgorithmAverage&); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmBest.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmBest.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmBest.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmBest.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmBest.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmBest.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmBest.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:146:27: note: by 'OpenMS::ConsensusIDAlgorithm& OpenMS::ConsensusIDAlgorithm::operator=(const OpenMS::ConsensusIDAlgorithm&)' 146 | ConsensusIDAlgorithm& operator=(const ConsensusIDAlgorithm&); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.h:86:35: note: by 'OpenMS::ConsensusIDAlgorithmIdentity& OpenMS::ConsensusIDAlgorithmIdentity::operator=(const OpenMS::ConsensusIDAlgorithmIdentity&)' 86 | ConsensusIDAlgorithmIdentity& operator=(const ConsensusIDAlgorithmIdentity&); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmBest.h:60:31: note: by 'OpenMS::ConsensusIDAlgorithmBest& OpenMS::ConsensusIDAlgorithmBest::operator=(const OpenMS::ConsensusIDAlgorithmBest&)' 60 | ConsensusIDAlgorithmBest& operator=(const ConsensusIDAlgorithmBest&); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:146:27: note: by 'OpenMS::ConsensusIDAlgorithm& OpenMS::ConsensusIDAlgorithm::operator=(const OpenMS::ConsensusIDAlgorithm&)' 146 | ConsensusIDAlgorithm& operator=(const ConsensusIDAlgorithm&); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.h:86:35: note: by 'OpenMS::ConsensusIDAlgorithmIdentity& OpenMS::ConsensusIDAlgorithmIdentity::operator=(const OpenMS::ConsensusIDAlgorithmIdentity&)' 86 | ConsensusIDAlgorithmIdentity& operator=(const ConsensusIDAlgorithmIdentity&); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPIons.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPIons.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPIons.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPIons.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPIons.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmPEPIons.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPIons.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:146:27: note: by 'OpenMS::ConsensusIDAlgorithm& OpenMS::ConsensusIDAlgorithm::operator=(const OpenMS::ConsensusIDAlgorithm&)' 146 | ConsensusIDAlgorithm& operator=(const ConsensusIDAlgorithm&); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.h:81:37: note: by 'OpenMS::ConsensusIDAlgorithmSimilarity& OpenMS::ConsensusIDAlgorithmSimilarity::operator=(const OpenMS::ConsensusIDAlgorithmSimilarity&)' 81 | ConsensusIDAlgorithmSimilarity& operator=(const ConsensusIDAlgorithmSimilarity&); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmPEPIons.h:66:34: note: by 'OpenMS::ConsensusIDAlgorithmPEPIons& OpenMS::ConsensusIDAlgorithmPEPIons::operator=(const OpenMS::ConsensusIDAlgorithmPEPIons&)' 66 | ConsensusIDAlgorithmPEPIons& operator=(const ConsensusIDAlgorithmPEPIons&); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPMatrix.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPMatrix.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPMatrix.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPMatrix.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPMatrix.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmPEPMatrix.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPMatrix.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:146:27: note: by 'OpenMS::ConsensusIDAlgorithm& OpenMS::ConsensusIDAlgorithm::operator=(const OpenMS::ConsensusIDAlgorithm&)' 146 | ConsensusIDAlgorithm& operator=(const ConsensusIDAlgorithm&); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.h:81:37: note: by 'OpenMS::ConsensusIDAlgorithmSimilarity& OpenMS::ConsensusIDAlgorithmSimilarity::operator=(const OpenMS::ConsensusIDAlgorithmSimilarity&)' 81 | ConsensusIDAlgorithmSimilarity& operator=(const ConsensusIDAlgorithmSimilarity&); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmPEPMatrix.h:68:36: note: by 'OpenMS::ConsensusIDAlgorithmPEPMatrix& OpenMS::ConsensusIDAlgorithmPEPMatrix::operator=(const OpenMS::ConsensusIDAlgorithmPEPMatrix&)' 68 | ConsensusIDAlgorithmPEPMatrix& operator=(const ConsensusIDAlgorithmPEPMatrix&); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmRanks.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmRanks.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmRanks.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmRanks.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmRanks.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmRanks.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmRanks.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:146:27: note: by 'OpenMS::ConsensusIDAlgorithm& OpenMS::ConsensusIDAlgorithm::operator=(const OpenMS::ConsensusIDAlgorithm&)' 146 | ConsensusIDAlgorithm& operator=(const ConsensusIDAlgorithm&); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.h:86:35: note: by 'OpenMS::ConsensusIDAlgorithmIdentity& OpenMS::ConsensusIDAlgorithmIdentity::operator=(const OpenMS::ConsensusIDAlgorithmIdentity&)' 86 | ConsensusIDAlgorithmIdentity& operator=(const ConsensusIDAlgorithmIdentity&); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmRanks.h:66:32: note: by 'OpenMS::ConsensusIDAlgorithmRanks& OpenMS::ConsensusIDAlgorithmRanks::operator=(const OpenMS::ConsensusIDAlgorithmRanks&)' 66 | ConsensusIDAlgorithmRanks& operator=(const ConsensusIDAlgorithmRanks&); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:146:27: note: by 'OpenMS::ConsensusIDAlgorithm& OpenMS::ConsensusIDAlgorithm::operator=(const OpenMS::ConsensusIDAlgorithm&)' 146 | ConsensusIDAlgorithm& operator=(const ConsensusIDAlgorithm&); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.h:81:37: note: by 'OpenMS::ConsensusIDAlgorithmSimilarity& OpenMS::ConsensusIDAlgorithmSimilarity::operator=(const OpenMS::ConsensusIDAlgorithmSimilarity&)' 81 | ConsensusIDAlgorithmSimilarity& operator=(const ConsensusIDAlgorithmSimilarity&); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmWorst.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmWorst.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmWorst.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmWorst.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmWorst.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmWorst.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmWorst.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:146:27: note: by 'OpenMS::ConsensusIDAlgorithm& OpenMS::ConsensusIDAlgorithm::operator=(const OpenMS::ConsensusIDAlgorithm&)' 146 | ConsensusIDAlgorithm& operator=(const ConsensusIDAlgorithm&); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.h:86:35: note: by 'OpenMS::ConsensusIDAlgorithmIdentity& OpenMS::ConsensusIDAlgorithmIdentity::operator=(const OpenMS::ConsensusIDAlgorithmIdentity&)' 86 | ConsensusIDAlgorithmIdentity& operator=(const ConsensusIDAlgorithmIdentity&); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmWorst.h:60:32: note: by 'OpenMS::ConsensusIDAlgorithmWorst& OpenMS::ConsensusIDAlgorithmWorst::operator=(const OpenMS::ConsensusIDAlgorithmWorst&)' 60 | ConsensusIDAlgorithmWorst& operator=(const ConsensusIDAlgorithmWorst&); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusMapMergerAlgorithm.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusMapMergerAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusMapMergerAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusMapMergerAlgorithm.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/ConsensusMapMergerAlgorithm.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusMapMergerAlgorithm.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/ConsensusMapMergerAlgorithm.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusMapMergerAlgorithm.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusMapMergerAlgorithm.h:63:23: note: by 'OpenMS::ConsensusMapMergerAlgorithm::operator=' 63 | class OPENMS_DLLAPI ConsensusMapMergerAlgorithm: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FalseDiscoveryRate.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FalseDiscoveryRate.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FalseDiscoveryRate.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FalseDiscoveryRate.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/FalseDiscoveryRate.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/FalseDiscoveryRate.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/FalseDiscoveryRate.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/FalseDiscoveryRate.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/FalseDiscoveryRate.h:236:25: note: by 'OpenMS::FalseDiscoveryRate& OpenMS::FalseDiscoveryRate::operator=(const OpenMS::FalseDiscoveryRate&)' 236 | FalseDiscoveryRate& operator=(const FalseDiscoveryRate&); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FIAMSDataProcessor.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FIAMSDataProcessor.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FIAMSDataProcessor.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FIAMSDataProcessor.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/FIAMSDataProcessor.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/FIAMSDataProcessor.h:36, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/FIAMSDataProcessor.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:101:23: note: by 'OpenMS::SavitzkyGolayFilter& OpenMS::SavitzkyGolayFilter::operator=(const OpenMS::SavitzkyGolayFilter&)' 101 | class OPENMS_DLLAPI SavitzkyGolayFilter : | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/FIAMSDataProcessor.h:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/FIAMSDataProcessor.h:74:25: note: by 'OpenMS::FIAMSDataProcessor& OpenMS::FIAMSDataProcessor::operator=(const OpenMS::FIAMSDataProcessor&)' 74 | FIAMSDataProcessor& operator=(const FIAMSDataProcessor& fdp) = default; | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/FIAMSDataProcessor.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/AccurateMassSearchEngine.h:206:23: note: by 'OpenMS::AccurateMassSearchEngine& OpenMS::AccurateMassSearchEngine::operator=(const OpenMS::AccurateMassSearchEngine&)' 206 | class OPENMS_DLLAPI AccurateMassSearchEngine : | ^~~~~~~~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.h:75:23: note: by 'OpenMS::BayesianProteinInferenceAlgorithm& OpenMS::BayesianProteinInferenceAlgorithm::operator=(const OpenMS::BayesianProteinInferenceAlgorithm&)' 75 | class OPENMS_DLLAPI BayesianProteinInferenceAlgorithm : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/FalseDiscoveryRate.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/FalseDiscoveryRate.h:236:25: note: by 'OpenMS::FalseDiscoveryRate& OpenMS::FalseDiscoveryRate::operator=(const OpenMS::FalseDiscoveryRate&)' 236 | FalseDiscoveryRate& operator=(const FalseDiscoveryRate&); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:41: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/IDScoreSwitcherAlgorithm.h:48:23: note: by 'OpenMS::IDScoreSwitcherAlgorithm::operator=' 48 | class OPENMS_DLLAPI IDScoreSwitcherAlgorithm: | ^~~~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:47: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::FilterPeptideEvidences(EvidenceFilter&, std::vector&) [with EvidenceFilter = DigestionFilter]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:486:68: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:728:35: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::DigestionFilter]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 728 | std::not1(filter)); | ~~~~~~~~~^~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1138:24: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1147:26: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMetaValue]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:572:26: required from 'static void OpenMS::IDFilter::keepMatchingItemsUnroll(IDContainer&, const Predicate&) [with IDContainer = std::vector; Predicate = HasMetaValue]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1210:30: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMetaValue]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1358:31: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1368:35: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FIAMSScheduler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FIAMSScheduler.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FIAMSScheduler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FIAMSScheduler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/FIAMSScheduler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/FIAMSDataProcessor.h:36, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/FIAMSScheduler.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/StringListUtils.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/TextFile.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/CsvFile.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/FIAMSScheduler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/FIAMSScheduler.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:101:23: note: by 'OpenMS::SavitzkyGolayFilter& OpenMS::SavitzkyGolayFilter::operator=(const OpenMS::SavitzkyGolayFilter&)' 101 | class OPENMS_DLLAPI SavitzkyGolayFilter : | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/FIAMSDataProcessor.h:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/FIAMSDataProcessor.h:74:25: note: by 'OpenMS::FIAMSDataProcessor& OpenMS::FIAMSDataProcessor::operator=(const OpenMS::FIAMSDataProcessor&)' 74 | FIAMSDataProcessor& operator=(const FIAMSDataProcessor& fdp) = default; | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/HiddenMarkovModel.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/HiddenMarkovModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/HiddenMarkovModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/HiddenMarkovModel.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/HiddenMarkovModel.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 64%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDConflictResolverAlgorithm.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDConflictResolverAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDConflictResolverAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDConflictResolverAlgorithm.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/IDConflictResolverAlgorithm.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/IDConflictResolverAlgorithm.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/IDConflictResolverAlgorithm.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 64%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDMapper.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDMapper.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDMapper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDMapper.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/IDMapper.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/IDMapper.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/IDMapper.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/IDMapper.h:44: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/IDMapper.h:77:15: note: by 'OpenMS::IDMapper& OpenMS::IDMapper::operator=(const OpenMS::IDMapper&)' 77 | IDMapper& operator=(const IDMapper& rhs); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDBoostGraph.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDBoostGraph.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDBoostGraph.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDBoostGraph.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/IDBoostGraph.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/FalseDiscoveryRate.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/IDBoostGraph.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/specfun.h:43, from /usr/include/c++/13/cmath:3699, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/MessagePasserFactory.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/IDBoostGraph.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/IDBoostGraph.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/FalseDiscoveryRate.h:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/FalseDiscoveryRate.h:236:25: note: by 'OpenMS::FalseDiscoveryRate& OpenMS::FalseDiscoveryRate::operator=(const OpenMS::FalseDiscoveryRate&)' 236 | FalseDiscoveryRate& operator=(const FalseDiscoveryRate&); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 64%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDMergerAlgorithm.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDMergerAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDMergerAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDMergerAlgorithm.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/IDMergerAlgorithm.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/IDMergerAlgorithm.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/IDMergerAlgorithm.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/IDMergerAlgorithm.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/IDMergerAlgorithm.h:61:23: note: by 'OpenMS::IDMergerAlgorithm::operator=' 61 | class OPENMS_DLLAPI IDMergerAlgorithm: | ^~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 64%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDRipper.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDRipper.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDRipper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDRipper.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/IDRipper.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/IDRipper.h:36, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/IDRipper.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/IDRipper.h:180:16: note: by 'OpenMS::IDRipper& OpenMS::IDRipper::operator=(const OpenMS::IDRipper&)' 180 | IDRipper & operator=(const IDRipper & rhs); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 64%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDDecoyProbability.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDDecoyProbability.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDDecoyProbability.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDDecoyProbability.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/IDDecoyProbability.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/IDDecoyProbability.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/IDDecoyProbability.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/IDDecoyProbability.h:72:26: note: by 'OpenMS::IDDecoyProbability& OpenMS::IDDecoyProbability::operator=(const OpenMS::IDDecoyProbability&)' 72 | IDDecoyProbability & operator=(const IDDecoyProbability & rhs); | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 64%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDScoreGetterSetter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDScoreGetterSetter.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDScoreGetterSetter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDScoreGetterSetter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/IDScoreGetterSetter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/IDScoreGetterSetter.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/IDScoreGetterSetter.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/IDScoreGetterSetter.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 64%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/MessagePasserFactory.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/MessagePasserFactory.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/MessagePasserFactory.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/MessagePasserFactory.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/MessagePasserFactory.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 64%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDScoreSwitcherAlgorithm.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDScoreSwitcherAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDScoreSwitcherAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDScoreSwitcherAlgorithm.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/IDScoreSwitcherAlgorithm.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/IDScoreSwitcherAlgorithm.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/IDScoreSwitcherAlgorithm.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/IDScoreSwitcherAlgorithm.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/IDScoreSwitcherAlgorithm.h:48:23: note: by 'OpenMS::IDScoreSwitcherAlgorithm::operator=' 48 | class OPENMS_DLLAPI IDScoreSwitcherAlgorithm: | ^~~~~~~~~~~~~~~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 64%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PeptideProteinResolution.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PeptideProteinResolution.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PeptideProteinResolution.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PeptideProteinResolution.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/PeptideProteinResolution.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/PeptideProteinResolution.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ProteinHit.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ProteinIdentification.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/PeptideProteinResolution.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/PeptideProteinResolution.cpp:34: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::FilterPeptideEvidences(EvidenceFilter&, std::vector&) [with EvidenceFilter = DigestionFilter]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:486:68: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:728:35: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::DigestionFilter]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 728 | std::not1(filter)); | ~~~~~~~~~^~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68: /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1138:24: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1147:26: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMetaValue]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:572:26: required from 'static void OpenMS::IDFilter::keepMatchingItemsUnroll(IDContainer&, const Predicate&) [with IDContainer = std::vector; Predicate = HasMetaValue]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1210:30: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMetaValue]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1358:31: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1368:35: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 64%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/MetaboliteSpectralMatching.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/MetaboliteSpectralMatching.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/MetaboliteSpectralMatching.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/MetaboliteSpectralMatching.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/MetaboliteSpectralMatching.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MassTrace.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/MetaboliteSpectralMatching.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/MetaboliteSpectralMatching.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Peak2D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MassTrace.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/MetaboliteSpectralMatching.h:43: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/MetaboliteSpectralMatching.h:148:23: note: by 'OpenMS::MetaboliteSpectralMatching& OpenMS::MetaboliteSpectralMatching::operator=(const OpenMS::MetaboliteSpectralMatching&)' 148 | class OPENMS_DLLAPI MetaboliteSpectralMatching : | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/MetaboliteSpectralMatching.cpp:43: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h:49: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:73:35: note: by 'OpenMS::BinnedSpectrumCompareFunctor& OpenMS::BinnedSpectrumCompareFunctor::operator=(const OpenMS::BinnedSpectrumCompareFunctor&)' 73 | BinnedSpectrumCompareFunctor& operator=(const BinnedSpectrumCompareFunctor& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:42: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h:84:25: note: by 'OpenMS::SpectrumAlignment& OpenMS::SpectrumAlignment::operator=(const OpenMS::SpectrumAlignment&)' 84 | SpectrumAlignment & operator=(const SpectrumAlignment & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:75:11: note: by 'OpenMS::SpectraMerger::SpectraDistance_::operator=' 75 | class SpectraDistance_ : | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:146:20: note: by 'OpenMS::SpectraMerger& OpenMS::SpectraMerger::operator=(const OpenMS::SpectraMerger&)' 146 | SpectraMerger& operator=(const SpectraMerger& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/MetaboliteSpectralMatching.cpp:44: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/WindowMower.h:69:18: note: by 'OpenMS::WindowMower& OpenMS::WindowMower::operator=(const OpenMS::WindowMower&)' 69 | WindowMower& operator=(const WindowMower& source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 64%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PrecursorPurity.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PrecursorPurity.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PrecursorPurity.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PrecursorPurity.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/PrecursorPurity.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/PrecursorPurity.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/PrecursorPurity.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 64%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ProtonDistributionModel.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ProtonDistributionModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ProtonDistributionModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ProtonDistributionModel.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/ProtonDistributionModel.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ProtonDistributionModel.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/ProtonDistributionModel.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ProtonDistributionModel.h:89:31: note: by 'OpenMS::ProtonDistributionModel& OpenMS::ProtonDistributionModel::operator=(const OpenMS::ProtonDistributionModel&)' 89 | ProtonDistributionModel & operator=(const ProtonDistributionModel & pdm); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PercolatorFeatureSetHelper.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PercolatorFeatureSetHelper.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PercolatorFeatureSetHelper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PercolatorFeatureSetHelper.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/PercolatorFeatureSetHelper.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 64%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PeptideIndexing.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PeptideIndexing.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PeptideIndexing.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PeptideIndexing.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/PeptideIndexing.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/PeptideIndexing.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/PeptideIndexing.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/PeptideIndexing.h:113:22: note: by 'OpenMS::PeptideIndexing& OpenMS::PeptideIndexing::operator=(const OpenMS::PeptideIndexing&)' 113 | class OPENMS_DLLAPI PeptideIndexing : | ^~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/SiriusAdapterAlgorithm.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/SiriusAdapterAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/SiriusAdapterAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/SiriusAdapterAlgorithm.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/SiriusAdapterAlgorithm.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/SiriusAdapterAlgorithm.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/SiriusAdapterAlgorithm.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Peak2D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:49:21: note: by 'OpenMS::KDTreeFeatureMaps& OpenMS::KDTreeFeatureMaps::operator=(const OpenMS::KDTreeFeatureMaps&)' 49 | class OPENMS_DLLAPI KDTreeFeatureMaps : public DefaultParamHandler | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/SiriusAdapterAlgorithm.h:52:23: note: by 'OpenMS::SiriusAdapterAlgorithm::operator=' 52 | class OPENMS_DLLAPI SiriusAdapterAlgorithm : public DefaultParamHandler | ^~~~~~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/SimpleSearchEngineAlgorithm.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/SimpleSearchEngineAlgorithm.h:36: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/SimpleSearchEngineAlgorithm.h:47:21: note: by 'OpenMS::SimpleSearchEngineAlgorithm::operator=' 47 | class OPENMS_DLLAPI SimpleSearchEngineAlgorithm : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/PeptideIndexing.h:113:22: note: by 'OpenMS::PeptideIndexing& OpenMS::PeptideIndexing::operator=(const OpenMS::PeptideIndexing&)' 113 | class OPENMS_DLLAPI PeptideIndexing : | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp:43: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:87:35: note: by 'OpenMS::TheoreticalSpectrumGenerator& OpenMS::TheoreticalSpectrumGenerator::operator=(const OpenMS::TheoreticalSpectrumGenerator&)' 87 | TheoreticalSpectrumGenerator& operator=(const TheoreticalSpectrumGenerator& tsg); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp:44: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h:84:25: note: by 'OpenMS::SpectrumAlignment& OpenMS::SpectrumAlignment::operator=(const OpenMS::SpectrumAlignment&)' 84 | SpectrumAlignment & operator=(const SpectrumAlignment & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp:51: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NLargest.h:72:16: note: by 'OpenMS::NLargest& OpenMS::NLargest::operator=(const OpenMS::NLargest&)' 72 | NLargest & operator=(const NLargest & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp:52: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h:70:18: note: by 'OpenMS::Normalizer& OpenMS::Normalizer::operator=(const OpenMS::Normalizer&)' 70 | Normalizer & operator=(const Normalizer & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp:53: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ThresholdMower.h:66:22: note: by 'OpenMS::ThresholdMower& OpenMS::ThresholdMower::operator=(const OpenMS::ThresholdMower&)' 66 | ThresholdMower & operator=(const ThresholdMower & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp:54: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/WindowMower.h:69:18: note: by 'OpenMS::WindowMower& OpenMS::WindowMower::operator=(const OpenMS::WindowMower&)' 69 | WindowMower& operator=(const WindowMower& source); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp:50: /builddir/build/BUILD/Omake[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' penMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::FilterPeptideEvidences(EvidenceFilter&, std::vector&) [with EvidenceFilter = DigestionFilter]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:486:68: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:728:35: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::DigestionFilter]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 728 | std::not1(filter)); | ~~~~~~~~~^~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1138:24: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1147:26: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMetaValue]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:572:26: required from 'static void OpenMS::IDFilter::keepMatchingItemsUnroll(IDContainer&, const Predicate&) [with IDContainer = std::vector; Predicate = HasMetaValue]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1210:30: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMetaValue]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1358:31: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1368:35: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoIonScoring.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoIonScoring.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoIonScoring.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoIonScoring.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/DENOVO/DeNovoIonScoring.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoIonScoring.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/DENOVO/DeNovoIonScoring.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoIonScoring.h:118:24: note: by 'OpenMS::DeNovoIonScoring& OpenMS::DeNovoIonScoring::operator=(const OpenMS::DeNovoIonScoring&)' 118 | DeNovoIonScoring & operator=(const DeNovoIonScoring & rhs); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoAlgorithm.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoAlgorithm.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/DENOVO/DeNovoAlgorithm.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoAlgorithm.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/DENOVO/DeNovoAlgorithm.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoAlgorithm.h:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoIonScoring.h:118:24: note: by 'OpenMS::DeNovoIonScoring& OpenMS::DeNovoIonScoring::operator=(const OpenMS::DeNovoIonScoring&)' 118 | DeNovoIonScoring & operator=(const DeNovoIonScoring & rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoAlgorithm.h:70:23: note: by 'OpenMS::DeNovoAlgorithm& OpenMS::DeNovoAlgorithm::operator=(const OpenMS::DeNovoAlgorithm&)' 70 | DeNovoAlgorithm & operator=(const DeNovoAlgorithm & rhs); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoPostScoring.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoPostScoring.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoPostScoring.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoPostScoring.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/DENOVO/DeNovoPostScoring.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoPostScoring.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/DENOVO/DeNovoPostScoring.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoPostScoring.h:70:25: note: by 'OpenMS::DeNovoPostScoring& OpenMS::DeNovoPostScoring::operator=(const OpenMS::DeNovoPostScoring&)' 70 | DeNovoPostScoring & operator=(const DeNovoPostScoring & rhs); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoIdentification.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoIdentification.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoIdentification.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoIdentification.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/DENOVO/DeNovoIdentification.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoIdentification.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/DENOVO/DeNovoIdentification.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoIdentification.h:70:28: note: by 'OpenMS::DeNovoIdentification& OpenMS::DeNovoIdentification::operator=(const OpenMS::DeNovoIdentification&)' 70 | DeNovoIdentification & operator=(const DeNovoIdentification & rhs); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/SiriusMSConverter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/SiriusMSConverter.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/SiriusMSConverter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/SiriusMSConverter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/SiriusMSConverter.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/SiriusMSConverter.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/SiriusMSConverter.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Peak2D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:49:21: note: by 'OpenMS::KDTreeFeatureMaps& OpenMS::KDTreeFeatureMaps::operator=(const OpenMS::KDTreeFeatureMaps&)' 49 | class OPENMS_DLLAPI KDTreeFeatureMaps : public DefaultParamHandler | ^~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIdentificationBase.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIdentificationBase.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIdentificationBase.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIdentificationBase.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentificationBase.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentificationBase.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:42: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h:74:28: note: by 'OpenMS::ZhangSimilarityScore& OpenMS::ZhangSimilarityScore::operator=(const OpenMS::ZhangSimilarityScore&)' 74 | ZhangSimilarityScore & operator=(const ZhangSimilarityScore & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:44: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.h:107:34: note: by 'OpenMS::MassDecompositionAlgorithm& OpenMS::MassDecompositionAlgorithm::operator=(const OpenMS::MassDecompositionAlgorithm&)' 107 | MassDecompositionAlgorithm & operator=(const MassDecompositionAlgorithm & rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:45: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/PeptideHit.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/PeptideIdentification.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:39: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h:102:30: note: by 'OpenMS::CompNovoIonScoringBase& OpenMS::CompNovoIonScoringBase::operator=(const OpenMS::CompNovoIonScoringBase&)' 102 | CompNovoIonScoringBase & operator=(const CompNovoIonScoringBase & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:77:34: note: by 'OpenMS::CompNovoIdentificationBase& OpenMS::CompNovoIdentificationBase::operator=(const OpenMS::CompNovoIdentificationBase&)' 77 | CompNovoIdentificationBase & operator=(const CompNovoIdentificationBase & source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIdentificationCID.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIdentificationCID.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIdentificationCID.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIdentificationCID.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentificationCID.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationCID.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentificationCID.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:42: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h:74:28: note: by 'OpenMS::ZhangSimilarityScore& OpenMS::ZhangSimilarityScore::operator=(const OpenMS::ZhangSimilarityScore&)' 74 | ZhangSimilarityScore & operator=(const ZhangSimilarityScore & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:44: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.h:107:34: note: by 'OpenMS::MassDecompositionAlgorithm& OpenMS::MassDecompositionAlgorithm::operator=(const OpenMS::MassDecompositionAlgorithm&)' 107 | MassDecompositionAlgorithm & operator=(const MassDecompositionAlgorithm & rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:45: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/PeptideHit.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/PeptideIdentification.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:39: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h:102:30: note: by 'OpenMS::CompNovoIonScoringBase& OpenMS::CompNovoIonScoringBase::operator=(const OpenMS::CompNovoIonScoringBase&)' 102 | CompNovoIonScoringBase & operator=(const CompNovoIonScoringBase & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:77:34: note: by 'OpenMS::CompNovoIdentificationBase& OpenMS::CompNovoIdentificationBase::operator=(const OpenMS::CompNovoIdentificationBase&)' 77 | CompNovoIdentificationBase & operator=(const CompNovoIdentificationBase & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationCID.h:73:33: note: by 'OpenMS::CompNovoIdentificationCID& OpenMS::CompNovoIdentificationCID::operator=(const OpenMS::CompNovoIdentificationCID&)' 73 | CompNovoIdentificationCID & operator=(const CompNovoIdentificationCID & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentificationCID.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h:70:18: note: by 'OpenMS::Normalizer& OpenMS::Normalizer::operator=(const OpenMS::Normalizer&)' 70 | Normalizer & operator=(const Normalizer & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignmentScore.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentificationCID.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h:84:25: note: by 'OpenMS::SpectrumAlignment& OpenMS::SpectrumAlignment::operator=(const OpenMS::SpectrumAlignment&)' 84 | SpectrumAlignment & operator=(const SpectrumAlignment & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignmentScore.h:88:30: note: by 'OpenMS::SpectrumAlignmentScore& OpenMS::SpectrumAlignmentScore::operator=(const OpenMS::SpectrumAlignmentScore&)' 88 | SpectrumAlignmentScore & operator=(const SpectrumAlignmentScore & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentificationCID.cpp:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringCID.h:84:29: note: by 'OpenMS::CompNovoIonScoringCID& OpenMS::CompNovoIonScoringCID::operator=(const OpenMS::CompNovoIonScoringCID&)' 84 | CompNovoIonScoringCID & operator=(const CompNovoIonScoringCID & source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIonScoring.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIonScoring.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIonScoring.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIonScoring.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/DENOVO/CompNovoIonScoring.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoring.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/DENOVO/CompNovoIonScoring.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoring.h:43: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h:74:28: note: by 'OpenMS::ZhangSimilarityScore& OpenMS::ZhangSimilarityScore::operator=(const OpenMS::ZhangSimilarityScore&)' 74 | ZhangSimilarityScore & operator=(const ZhangSimilarityScore & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoring.h:45: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.h:107:34: note: by 'OpenMS::MassDecompositionAlgorithm& OpenMS::MassDecompositionAlgorithm::operator=(const OpenMS::MassDecompositionAlgorithm&)' 107 | MassDecompositionAlgorithm & operator=(const MassDecompositionAlgorithm & rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoring.h:46: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/PeptideHit.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/PeptideIdentification.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoring.h:39: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h:102:30: note: by 'OpenMS::CompNovoIonScoringBase& OpenMS::CompNovoIonScoringBase::operator=(const OpenMS::CompNovoIonScoringBase&)' 102 | CompNovoIonScoringBase & operator=(const CompNovoIonScoringBase & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoring.h:84:26: note: by 'OpenMS::CompNovoIonScoring& OpenMS::CompNovoIonScoring::operator=(const OpenMS::CompNovoIonScoring&)' 84 | CompNovoIonScoring & operator=(const CompNovoIonScoring & source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIonScoringBase.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIonScoringBase.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIonScoringBase.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIonScoringBase.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/DENOVO/CompNovoIonScoringBase.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/DENOVO/CompNovoIonScoringBase.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h:102:30: note: by 'OpenMS::CompNovoIonScoringBase& OpenMS::CompNovoIonScoringBase::operator=(const OpenMS::CompNovoIonScoringBase&)' 102 | CompNovoIonScoringBase & operator=(const CompNovoIonScoringBase & source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIdentification.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIdentification.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIdentification.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIdentification.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentification.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentification.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentification.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:42: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h:74:28: note: by 'OpenMS::ZhangSimilarityScore& OpenMS::ZhangSimilarityScore::operator=(const OpenMS::ZhangSimilarityScore&)' 74 | ZhangSimilarityScore & operator=(const ZhangSimilarityScore & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:44: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.h:107:34: note: by 'OpenMS::MassDecompositionAlgorithm& OpenMS::MassDecompositionAlgorithm::operator=(const OpenMS::MassDecompositionAlgorithm&)' 107 | MassDecompositionAlgorithm & operator=(const MassDecompositionAlgorithm & rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:45: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/PeptideHit.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/PeptideIdentification.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:39: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h:102:30: note: by 'OpenMS::CompNovoIonScoringBase& OpenMS::CompNovoIonScoringBase::operator=(const OpenMS::CompNovoIonScoringBase&)' 102 | CompNovoIonScoringBase & operator=(const CompNovoIonScoringBase & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:77:34: note: by 'OpenMS::CompNovoIdentificationBase& OpenMS::CompNovoIdentificationBase::operator=(const OpenMS::CompNovoIdentificationBase&)' 77 | CompNovoIdentificationBase & operator=(const CompNovoIdentificationBase & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentification.h:73:30: note: by 'OpenMS::CompNovoIdentification& OpenMS::CompNovoIdentification::operator=(const OpenMS::CompNovoIdentification&)' 73 | CompNovoIdentification & operator=(const CompNovoIdentification & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentification.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h:70:18: note: by 'OpenMS::Normalizer& OpenMS::Normalizer::operator=(const OpenMS::Normalizer&)' 70 | Normalizer & operator=(const Normalizer & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignmentScore.h:39, make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentification.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h:84:25: note: by 'OpenMS::SpectrumAlignment& OpenMS::SpectrumAlignment::operator=(const OpenMS::SpectrumAlignment&)' 84 | SpectrumAlignment & operator=(const SpectrumAlignment & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignmentScore.h:88:30: note: by 'OpenMS::SpectrumAlignmentScore& OpenMS::SpectrumAlignmentScore::operator=(const OpenMS::SpectrumAlignmentScore&)' 88 | SpectrumAlignmentScore & operator=(const SpectrumAlignmentScore & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentification.cpp:42: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoring.h:84:26: note: by 'OpenMS::CompNovoIonScoring& OpenMS::CompNovoIonScoring::operator=(const OpenMS::CompNovoIonScoring&)' 84 | CompNovoIonScoring & operator=(const CompNovoIonScoring & source); | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 67%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/PIP/LocalLinearMap.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/PIP/LocalLinearMap.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/PIP/LocalLinearMap.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/PIP/LocalLinearMap.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/PIP/LocalLinearMap.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 67%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIonScoringCID.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIonScoringCID.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIonScoringCID.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIonScoringCID.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/DENOVO/CompNovoIonScoringCID.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringCID.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/DENOVO/CompNovoIonScoringCID.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringCID.h:43: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h:74:28: note: by 'OpenMS::ZhangSimilarityScore& OpenMS::ZhangSimilarityScore::operator=(const OpenMS::ZhangSimilarityScore&)' 74 | ZhangSimilarityScore & operator=(const ZhangSimilarityScore & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringCID.h:45: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.h:107:34: note: by 'OpenMS::MassDecompositionAlgorithm& OpenMS::MassDecompositionAlgorithm::operator=(const OpenMS::MassDecompositionAlgorithm&)' 107 | MassDecompositionAlgorithm & operator=(const MassDecompositionAlgorithm & rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringCID.h:46: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/PeptideHit.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/PeptideIdentification.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringCID.h:39: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h:102:30: note: by 'OpenMS::CompNovoIonScoringBase& OpenMS::CompNovoIonScoringBase::operator=(const OpenMS::CompNovoIonScoringBase&)' 102 | CompNovoIonScoringBase & operator=(const CompNovoIonScoringBase & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringCID.h:84:29: note: by 'OpenMS::CompNovoIonScoringCID& OpenMS::CompNovoIonScoringCID::operator=(const OpenMS::CompNovoIonScoringCID&)' 84 | CompNovoIonScoringCID & operator=(const CompNovoIonScoringCID & source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 67%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/PIP/PeakIntensityPredictor.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/PIP/PeakIntensityPredictor.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/PIP/PeakIntensityPredictor.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/PIP/PeakIntensityPredictor.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/PIP/PeakIntensityPredictor.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 67%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MRM/MRMFragmentSelection.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MRM/MRMFragmentSelection.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MRM/MRMFragmentSelection.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MRM/MRMFragmentSelection.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MRM/MRMFragmentSelection.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MRM/MRMFragmentSelection.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MRM/MRMFragmentSelection.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MRM/MRMFragmentSelection.h:78:28: note: by 'OpenMS::MRMFragmentSelection& OpenMS::MRMFragmentSelection::operator=(const OpenMS::MRMFragmentSelection&)' 78 | MRMFragmentSelection & operator=(const MRMFragmentSelection & rhs); | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 67%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MRM/ReactionMonitoringTransition.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MRM/ReactionMonitoringTransition.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MRM/ReactionMonitoringTransition.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MRM/ReactionMonitoringTransition.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MRM/ReactionMonitoringTransition.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 67%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/MetaboTargetedTargetDecoy.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/MetaboTargetedTargetDecoy.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/MetaboTargetedTargetDecoy.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/MetaboTargetedTargetDecoy.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/TARGETED/MetaboTargetedTargetDecoy.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 67%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/MetaboTargetedAssay.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/MetaboTargetedAssay.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/MetaboTargetedAssay.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/MetaboTargetedAssay.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/TARGETED/MetaboTargetedAssay.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/SiriusMSConverter.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/MetaboTargetedAssay.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/TARGETED/MetaboTargetedAssay.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63, from /usr/include/c++/13/map:62, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/MetaboTargetedAssay.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:49:21: note: by 'OpenMS::KDTreeFeatureMaps& OpenMS::KDTreeFeatureMaps::operator=(const OpenMS::KDTreeFeatureMaps&)' 49 | class OPENMS_DLLAPI KDTreeFeatureMaps : public DefaultParamHandler | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/TARGETED/MetaboTargetedAssay.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:120:32: note: by 'OpenMS::FeatureGroupingAlgorithm& OpenMS::FeatureGroupingAlgorithm::operator=(const OpenMS::FeatureGroupingAlgorithm&)' 120 | FeatureGroupingAlgorithm & operator=(const FeatureGroupingAlgorithm &); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.h:99:33: note: by 'OpenMS::FeatureGroupingAlgorithmQT& OpenMS::FeatureGroupingAlgorithmQT::operator=(const OpenMS::FeatureGroupingAlgorithmQT&)' 99 | FeatureGroupingAlgorithmQT& operator=(const FeatureGroupingAlgorithmQT&); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/TARGETED/MetaboTargetedAssay.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:73:35: note: by 'OpenMS::BinnedSpectrumCompareFunctor& OpenMS::BinnedSpectrumCompareFunctor::operator=(const OpenMS::BinnedSpectrumCompareFunctor&)' 73 | BinnedSpectrumCompareFunctor& operator=(const BinnedSpectrumCompareFunctor& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.h:73:34: note: by 'OpenMS::BinnedSpectralContrastAngle& OpenMS::BinnedSpectralContrastAngle::operator=(const OpenMS::BinnedSpectralContrastAngle&)' 73 | BinnedSpectralContrastAngle& operator=(const BinnedSpectralContrastAngle& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/TARGETED/MetaboTargetedAssay.cpp:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:42: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h:84:25: note: by 'OpenMS::SpectrumAlignment& OpenMS::SpectrumAlignment::operator=(const OpenMS::SpectrumAlignment&)' 84 | SpectrumAlignment & operatormake[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' =(const SpectrumAlignment & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:75:11: note: by 'OpenMS::SpectraMerger::SpectraDistance_::operator=' 75 | class SpectraDistance_ : | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:146:20: note: by 'OpenMS::SpectraMerger& OpenMS::SpectraMerger::operator=(const OpenMS::SpectraMerger&)' 146 | SpectraMerger& operator=(const SpectraMerger& source); | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 67%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/MRMMapping.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/MRMMapping.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/MRMMapping.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/MRMMapping.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/TARGETED/MRMMapping.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/MRMMapping.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/TARGETED/MRMMapping.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/MRMMapping.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/MRMMapping.h:95:18: note: by 'OpenMS::MRMMapping& OpenMS::MRMMapping::operator=(const OpenMS::MRMMapping&)' 95 | MRMMapping & operator=(const MRMMapping & rhs); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 67%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.h:60:42: note: by 'OpenMS::PrecursorIonSelectionPreprocessing& OpenMS::PrecursorIonSelectionPreprocessing::operator=(const OpenMS::PrecursorIonSelectionPreprocessing&)' 60 | PrecursorIonSelectionPreprocessing & operator=(const PrecursorIonSelectionPreprocessing & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/DetectabilitySimulation.h:71:30: note: by 'OpenMS::DetectabilitySimulation& OpenMS::DetectabilitySimulation::operator=(const OpenMS::DetectabilitySimulation&)' 71 | DetectabilitySimulation& operator=(const DetectabilitySimulation& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.cpp:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/RTSimulation.h:78:19: note: by 'OpenMS::RTSimulation& OpenMS::RTSimulation::operator=(const OpenMS::RTSimulation&)' 78 | RTSimulation& operator=(const RTSimulation& source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 67%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PrecursorIonSelection.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PrecursorIonSelection.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PrecursorIonSelection.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PrecursorIonSelection.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/TARGETED/PrecursorIonSelection.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelection.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/TARGETED/PrecursorIonSelection.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Feature.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelection.h:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:55:23: note: by 'OpenMS::PSLPFormulation& OpenMS::PSLPFormulation::operator=(const OpenMS::PSLPFormulation&)' 55 | class OPENMS_DLLAPI PSLPFormulation : | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelection.h:52:23: note: by 'OpenMS::PrecursorIonSelection& OpenMS::PrecursorIonSelection::operator=(const OpenMS::PrecursorIonSelection&)' 52 | class OPENMS_DLLAPI PrecursorIonSelection : | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/TARGETED/PrecursorIonSelection.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.h:60:42: note: by 'OpenMS::PrecursorIonSelectionPreprocessing& OpenMS::PrecursorIonSelectionPreprocessing::operator=(const OpenMS::PrecursorIonSelectionPreprocessing&)' 60 | PrecursorIonSelectionPreprocessing & operator=(const PrecursorIonSelectionPreprocessing & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/TARGETED/PrecursorIonSelection.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/IDMapper.h:77:15: note: by 'OpenMS::IDMapper& OpenMS::IDMapper::operator=(const OpenMS::IDMapper&)' 77 | IDMapper& operator=(const IDMapper& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.h:61:23: note: by 'OpenMS::OfflinePrecursorIonSelection& OpenMS::OfflinePrecursorIonSelection::operator=(const OpenMS::OfflinePrecursorIonSelection&)' 61 | class OPENMS_DLLAPI OfflinePrecursorIonSelection : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 67%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.cpp:34: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Feature.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/IDMapper.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.h:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/IDMapper.h:77:15: note: by 'OpenMS::IDMapper& OpenMS::IDMapper::operator=(const OpenMS::IDMapper&)' 77 | IDMapper& operator=(const IDMapper& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.h:42: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:55:23: note: by 'OpenMS::PSLPFormulation& OpenMS::PSLPFormulation::operator=(const OpenMS::PSLPFormulation&)' 55 | class OPENMS_DLLAPI PSLPFormulation : | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.h:61:23: note: by 'OpenMS::OfflinePrecursorIonSelection& OpenMS::OfflinePrecursorIonSelection::operator=(const OpenMS::OfflinePrecursorIonSelection&)' 61 | class OPENMS_DLLAPI OfflinePrecursorIonSelection : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.h:60:42: note: by 'OpenMS::PrecursorIonSelectionPreprocessing& OpenMS::PrecursorIonSelectionPreprocessing::operator=(const OpenMS::PrecursorIonSelectionPreprocessing&)' 60 | PrecursorIonSelectionPreprocessing & operator=(const PrecursorIonSelectionPreprocessing & source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PSProteinInference.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PSProteinInference.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PSProteinInference.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PSProteinInference.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/TARGETED/PSProteinInference.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 67%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PSLPFormulation.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PSLPFormulation.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PSLPFormulation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PSLPFormulation.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/TARGETED/PSLPFormulation.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/TARGETED/PSLPFormulation.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Feature.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:42: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:55:23: note: by 'OpenMS::PSLPFormulation& OpenMS::PSLPFormulation::operator=(const OpenMS::PSLPFormulation&)' 55 | class OPENMS_DLLAPI PSLPFormulation : | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/TARGETED/PSLPFormulation.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.h:60:42: note: by 'OpenMS::PrecursorIonSelectionPreprocessing& OpenMS::PrecursorIonSelectionPreprocessing::operator=(const OpenMS::PrecursorIonSelectionPreprocessing&)' 60 | PrecursorIonSelectionPreprocessing & operator=(const PrecursorIonSelectionPreprocessing & source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/IncludeExcludeTarget.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/IncludeExcludeTarget.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/IncludeExcludeTarget.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/IncludeExcludeTarget.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/TARGETED/IncludeExcludeTarget.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/TargetedExperimentHelper.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/TargetedExperimentHelper.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/TargetedExperimentHelper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/TargetedExperimentHelper.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/TARGETED/TargetedExperimentHelper.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/TargetedExperiment.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/TargetedExperiment.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/TargetedExperiment.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/TargetedExperiment.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/TARGETED/TargetedExperiment.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/InclusionExclusionList.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/InclusionExclusionList.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/InclusionExclusionList.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/InclusionExclusionList.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/TARGETED/InclusionExclusionList.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/InclusionExclusionList.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/TARGETED/InclusionExclusionList.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/InclusionExclusionList.h:52:23: note: by 'OpenMS::InclusionExclusionList::operator=' 52 | class OPENMS_DLLAPI InclusionExclusionList : | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/SimTypes.h:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/RTSimulation.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/TARGETED/InclusionExclusionList.cpp:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperimentHelper.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/InclusionExclusionList.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/RTSimulation.h:78:19: note: by 'OpenMS::RTSimulation& OpenMS::RTSimulation::operator=(const OpenMS::RTSimulation&)' 78 | RTSimulation& operator=(const RTSimulation& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/TARGETED/InclusionExclusionList.cpp:43: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h:49: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:73:35: note: by 'OpenMS::BinnedSpectrumCompareFunctor& OpenMS::BinnedSpectrumCompareFunctor::operator=(const OpenMS::BinnedSpectrumCompareFunctor&)' 73 | BinnedSpectrumCompareFunctor& operator=(const BinnedSpectrumCompareFunctor& source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/MorpheusScore.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/MorpheusScore.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/MorpheusScore.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/MorpheusScore.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/RNPXL/MorpheusScore.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/PScore.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/PScore.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/PScore.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/PScore.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/RNPXL/PScore.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/AScore.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/RNPXL/PScore.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/AScore.h:72:23: note: by 'OpenMS::AScore& OpenMS::AScore::operator=(const OpenMS::AScore&)' 72 | class OPENMS_DLLAPI AScore: public DefaultParamHandler | ^~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/RNPXL/PScore.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/RNPXL/PScore.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/RNPXL/PScore.cpp:36: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/HyperScore.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/HyperScore.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/HyperScore.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/HyperScore.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/RNPXL/HyperScore.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlFragmentAnnotationHelper.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlFragmentAnnotationHelper.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlFragmentAnnotationHelper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlFragmentAnnotationHelper.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/RNPXL/RNPxlFragmentAnnotationHelper.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlMarkerIonExtractor.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlMarkerIonExtractor.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlMarkerIonExtractor.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlMarkerIonExtractor.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/RNPXL/RNPxlMarkerIonExtractor.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/RNPXL/RNPxlMarkerIonExtractor.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63, from /usr/include/c++/13/map:62, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/RNPXL/RNPxlMarkerIonExtractor.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/RNPXL/RNPxlMarkerIonExtractor.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h:70:18: note: by 'OpenMS::Normalizer& OpenMS::Normalizer::operator=(const OpenMS::Normalizer&)' 70 | Normalizer & operator=(const Normalizer & source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlModificationsGenerator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlModificationsGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlModificationsGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlModificationsGenerator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/RNPXL/RNPxlModificationsGenerator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlReport.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlReport.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlReport.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlReport.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/RNPXL/RNPxlReport.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/RNPXL/RNPxlReport.h:43, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/RNPXL/RNPxlReport.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63, from /usr/include/c++/13/map:62, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/RNPXL/RNPxlMarkerIonExtractor.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/RNPXL/RNPxlReport.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.h:39: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.h:103:23: note: by 'OpenMS::OpenPepXLLFAlgorithm& OpenMS::OpenPepXLLFAlgorithm::operator=(const OpenMS::OpenPepXLLFAlgorithm&)' 103 | class OPENMS_DLLAPI OpenPepXLLFAlgorithm : | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/PeptideIndexing.h:113:22: note: by 'OpenMS::PeptideIndexing& OpenMS::PeptideIndexing::operator=(const OpenMS::PeptideIndexing&)' 113 | class OPENMS_DLLAPI PeptideIndexing : | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.cpp:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/SimpleTSGXLMS.h:115:23: note: by 'OpenMS::SimpleTSGXLMS& OpenMS::SimpleTSGXLMS::operator=(const OpenMS::SimpleTSGXLMS&)' 115 | SimpleTSGXLMS & operator=(const SimpleTSGXLMS & tsg); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.cpp:48: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.h:90:42: note: by 'OpenMS::TheoreticalSpectrumGeneratorXLMS& OpenMS::TheoreticalSpectrumGeneratorXLMS::operator=(const OpenMS::TheoreticalSpectrumGeneratorXLMS&)' 90 | TheoreticalSpectrumGeneratorXLMS & operator=(const TheoreticalSpectrumGeneratorXLMS & tsg); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.cpp:51: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OPXLDataStructs.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OPXLDataStructs.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OPXLDataStructs.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OPXLDataStructs.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/XLMS/OPXLDataStructs.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OpenPepXLAlgorithm.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OpenPepXLAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OpenPepXLAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OpenPepXLAlgorithm.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/XLMS/OpenPepXLAlgorithm.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/XLMS/OpenPepXLAlgorithm.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/XLMS/OpenPepXLAlgorithm.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/XLMS/OpenPepXLAlgorithm.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/XLMS/OpenPepXLAlgorithm.h:113:23: note: by 'OpenMS::OpenPepXLAlgorithm& OpenMS::OpenPepXLAlgorithm::operator=(const OpenMS::OpenPepXLAlgorithm&)' 113 | class OPENMS_DLLAPI OpenPepXLAlgorithm : | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/XLMS/OpenPepXLAlgorithm.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/IDMapper.h:77:15: note: by 'OpenMS::IDMapper& OpenMS::IDMapper::operator=(const OpenMS::IDMapper&)' 77 | IDMapper& operator=(const IDMapper& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/XLMS/OpenPepXLAlgorithm.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/PeptideIndexing.h:113:22: note: by 'OpenMS::PeptideIndexing& OpenMS::PeptideIndexing::operator=(const OpenMS::PeptideIndexing&)' 113 | class OPENMS_DLLAPI PeptideIndexing : | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/XLMS/OpenPepXLAlgorithm.cpp:41: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/SimpleTSGXLMS.h:115:23: note: by 'OpenMS::SimpleTSGXLMS& OpenMS::SimpleTSGXLMS::operator=(const OpenMS::SimpleTSGXLMS&)' 115 | SimpleTSGXLMS & operator=(const SimpleTSGXLMS & tsg); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/XLMS/OpenPepXLAlgorithm.cpp:48: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.h:90:42: note: by 'OpenMS::TheoreticalSpectrumGeneratorXLMS& OpenMS::TheoreticalSpectrumGeneratorXLMS::operator=(const OpenMS::TheoreticalSpectrumGeneratorXLMS&)' 90 | TheoreticalSpectrumGeneratorXLMS & operator=(const TheoreticalSpectrumGeneratorXLMS & tsg); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/XLMS/OpenPepXLAlgorithm.cpp:49: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NLargest.h:72:16: note: by 'OpenMS::NLargest& OpenMS::NLargest::operator=(const OpenMS::NLargest&)' 72 | NLargest & operator=(const NLargest & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/XLMS/OpenPepXLAlgorithm.cpp:51: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/SimpleTSGXLMS.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Peak1D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.h:39: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/SimpleTSGXLMS.h:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/SimpleTSGXLMS.h:115:23: note: by 'OpenMS::SimpleTSGXLMS& OpenMS::SimpleTSGXLMS::operator=(const OpenMS::SimpleTSGXLMS&)' 115 | SimpleTSGXLMS & operator=(const SimpleTSGXLMS & tsg); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.cpp:41: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ThresholdMower.h:66:22: note: by 'OpenMS::ThresholdMower& OpenMS::ThresholdMower::operator=(const OpenMS::ThresholdMower&)' 66 | ThresholdMower & operator=(const ThresholdMower & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.cpp:42: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h:70:18: note: by 'OpenMS::Normalizer& OpenMS::Normalizer::operator=(const OpenMS::Normalizer&)' 70 | Normalizer & operator=(const Normalizer & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.cpp:43: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NLargest.h:72:16: note: by 'OpenMS::NLargest& OpenMS::NLargest::operator=(const OpenMS::NLargest&)' 72 | NLargest & operator=(const NLargest & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.cpp:44: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/WindowMower.h:69:18: note: by 'OpenMS::WindowMower& OpenMS::WindowMower::operator=(const OpenMS::WindowMower&)' 69 | WindowMower& operator=(const WindowMower& source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OPXLHelper.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OPXLHelper.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OPXLHelper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OPXLHelper.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/XLMS/OPXLHelper.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLHelper.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/XLMS/OPXLHelper.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/PeptideHit.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/XFDRAlgorithm.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/XFDRAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/XFDRAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/XFDRAlgorithm.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/XLMS/XFDRAlgorithm.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/XLMS/XFDRAlgorithm.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/XLMS/XFDRAlgorithm.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/XLMS/XFDRAlgorithm.h:65:23: note: by 'OpenMS::XFDRAlgorithm& OpenMS::XFDRAlgorithm::operator=(const OpenMS::XFDRAlgorithm&)' 65 | class OPENMS_DLLAPI XFDRAlgorithm : | ^~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/BASELINE/MorphologicalFilter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/BASELINE/MorphologicalFilter.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/BASELINE/MorphologicalFilter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/BASELINE/MorphologicalFilter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/BASELINE/MorphologicalFilter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/XQuestScores.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/XQuestScores.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/XQuestScores.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/XQuestScores.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/XLMS/XQuestScores.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/SimpleTSGXLMS.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/XLMS/XQuestScores.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/XLMS/XQuestScores.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Peak1D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/XLMS/XQuestScores.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/SimpleTSGXLMS.h:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/SimpleTSGXLMS.h:115:23: note: by 'OpenMS::SimpleTSGXLMS& OpenMS::SimpleTSGXLMS::operator=(const OpenMS::SimpleTSGXLMS&)' 115 | SimpleTSGXLMS & operator=(const SimpleTSGXLMS & tsg); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/BernNorm.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/BernNorm.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/BernNorm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/BernNorm.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/BernNorm.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/BernNorm.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/BernNorm.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/BernNorm.h:76:16: note: by 'OpenMS::BernNorm& OpenMS::BernNorm::operator=(const OpenMS::BernNorm&)' 76 | BernNorm & operator=(const BernNorm & source); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/BernNorm.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ComplementFilter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ComplementFilter.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ComplementFilter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ComplementFilter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/ComplementFilter.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ComplementFilter.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/ComplementFilter.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h:59:21: note: by 'OpenMS::FilterFunctor& OpenMS::FilterFunctor::operator=(const OpenMS::FilterFunctor&)' 59 | FilterFunctor & operator=(const FilterFunctor & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ComplementFilter.h:71:24: note: by 'OpenMS::ComplementFilter& OpenMS::ComplementFilter::operator=(const OpenMS::ComplementFilter&)' 71 | ComplementFilter & operator=(const ComplementFilter & source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ComplementMarker.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ComplementMarker.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ComplementMarker.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ComplementMarker.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/ComplementMarker.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/PeakMarker.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ComplementMarker.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/ComplementMarker.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/PeakMarker.h:62:18: note: by 'OpenMS::PeakMarker& OpenMS::PeakMarker::operator=(const OpenMS::PeakMarker&)' 62 | PeakMarker & operator=(const PeakMarker & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ComplementMarker.h:71:24: note: by 'OpenMS::ComplementMarker& OpenMS::ComplementMarker::operator=(const OpenMS::ComplementMarker&)' 71 | ComplementMarker & operator=(const ComplementMarker & source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/GoodDiffFilter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/GoodDiffFilter.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/GoodDiffFilter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/GoodDiffFilter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/GoodDiffFilter.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/GoodDiffFilter.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/GoodDiffFilter.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h:59:21: note: by 'OpenMS::FilterFunctor& OpenMS::FilterFunctor::operator=(const OpenMS::FilterFunctor&)' 59 | FilterFunctor & operator=(const FilterFunctor & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/GoodDiffFilter.h:73:22: note: by 'OpenMS::GoodDiffFilter& OpenMS::GoodDiffFilter::operator=(const OpenMS::GoodDiffFilter&)' 73 | GoodDiffFilter & operator=(const GoodDiffFilter & source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/FilterFunctor.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/FilterFunctor.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/FilterFunctor.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/FilterFunctor.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/FilterFunctor.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/FilterFunctor.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h:59:21: note: by 'OpenMS::FilterFunctor& OpenMS::FilterFunctor::operator=(const OpenMS::FilterFunctor&)' 59 | FilterFunctor & operator=(const FilterFunctor & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/FilterFunctor.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ComplementFilter.h:71:24: note: by 'OpenMS::ComplementFilter& OpenMS::ComplementFilter::operator=(const OpenMS::ComplementFilter&)' 71 | ComplementFilter & operator=(const ComplementFilter & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/FilterFunctor.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/GoodDiffFilter.h:73:22: note: by 'OpenMS::GoodDiffFilter& OpenMS::GoodDiffFilter::operator=(const OpenMS::GoodDiffFilter&)' 73 | GoodDiffFilter & operator=(const GoodDiffFilter & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/FilterFunctor.cpp:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/IntensityBalanceFilter.h:73:30: note: by 'OpenMS::IntensityBalanceFilter& OpenMS::IntensityBalanceFilter::operator=(const OpenMS::IntensityBalanceFilter&)' 73 | IntensityBalanceFilter & operator=(const IntensityBalanceFilter & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/FilterFunctor.cpp:41: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NeutralLossDiffFilter.h:71:29: note: by 'OpenMS::NeutralLossDiffFilter& OpenMS::NeutralLossDiffFilter::operator=(const OpenMS::NeutralLossDiffFilter&)' 71 | NeutralLossDiffFilter & operator=(const NeutralLossDiffFilter & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/FilterFunctor.cpp:42: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/IsotopeDiffFilter.h:70:25: note: by 'OpenMS::IsotopeDiffFilter& OpenMS::IsotopeDiffFilter::operator=(const OpenMS::IsotopeDiffFilter&)' 70 | IsotopeDiffFilter & operator=(const IsotopeDiffFilter & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/FilterFunctor.cpp:43: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/TICFilter.h:68:17: note: by 'OpenMS::TICFilter& OpenMS::TICFilter::operator=(const OpenMS::TICFilter&)' 68 | TICFilter & operator=(const TICFilter & source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/IntensityBalanceFilter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/IntensityBalanceFilter.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/IntensityBalanceFilter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/IntensityBalanceFilter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/IntensityBalanceFilter.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/IntensityBalanceFilter.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/IntensityBalanceFilter.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h:59:21: note: by 'OpenMS::FilterFunctor& OpenMS::FilterFunctor::operator=(const OpenMS::FilterFunctor&)' 59 | FilterFunctor & operator=(const FilterFunctor & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/IntensityBalanceFilter.h:73:30: note: by 'OpenMS::IntensityBalanceFilter& OpenMS::IntensityBalanceFilter::operator=(const OpenMS::IntensityBalanceFilter&)' 73 | IntensityBalanceFilter & operator=(const IntensityBalanceFilter & source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/IsotopeDiffFilter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/IsotopeDiffFilter.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/IsotopeDiffFilter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/IsotopeDiffFilter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/IsotopeDiffFilter.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/IsotopeDiffFilter.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/IsotopeDiffFilter.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h:59:21: note: by 'OpenMS::FilterFunctor& OpenMS::FilterFunctor::operator=(const OpenMS::FilterFunctor&)' 59 | FilterFunctor & operator=(const FilterFunctor & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/IsotopeDiffFilter.h:70:25: note: by 'OpenMS::IsotopeDiffFilter& OpenMS::IsotopeDiffFilter::operator=(const OpenMS::IsotopeDiffFilter&)' 70 | IsotopeDiffFilter & operator=(const IsotopeDiffFilter & source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/IsotopeMarker.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/IsotopeMarker.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/IsotopeMarker.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/IsotopeMarker.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/IsotopeMarker.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/PeakMarker.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/IsotopeMarker.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/IsotopeMarker.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/PeakMarker.h:62:18: note: by 'OpenMS::PeakMarker& OpenMS::PeakMarker::operator=(const OpenMS::PeakMarker&)' 62 | PeakMarker & operator=(const PeakMarker & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/IsotopeMarker.h:77:21: note: by 'OpenMS::IsotopeMarker& OpenMS::IsotopeMarker::operator=(const OpenMS::IsotopeMarker&)' 77 | IsotopeMarker & operator=(const IsotopeMarker & source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/LinearResampler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/LinearResampler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/LinearResampler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/LinearResampler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/LinearResampler.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/LinearResampler.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:61:23: note: by 'OpenMS::LinearResampler& OpenMS::LinearResampler::operator=(const OpenMS::LinearResampler&)' 61 | class OPENMS_DLLAPI LinearResampler : | ^~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/MarkerMower.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/MarkerMower.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/MarkerMower.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/MarkerMower.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/MarkerMower.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/MarkerMower.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/MarkerMower.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/MarkerMower.h:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/PeakMarker.h:62:18: note: by 'OpenMS::PeakMarker& OpenMS::PeakMarker::operator=(const OpenMS::PeakMarker&)' 62 | PeakMarker & operator=(const PeakMarker & source); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/MarkerMower.h:42: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/MarkerMower.h:69:19: note: by 'OpenMS::MarkerMower& OpenMS::MarkerMower::operator=(const OpenMS::MarkerMower&)' 69 | MarkerMower & operator=(const MarkerMower & source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/NeutralLossDiffFilter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/NeutralLossDiffFilter.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/NeutralLossDiffFilter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/NeutralLossDiffFilter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/NeutralLossDiffFilter.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NeutralLossDiffFilter.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/NeutralLossDiffFilter.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h:59:21: note: by 'OpenMS::FilterFunctor& OpenMS::FilterFunctor::operator=(const OpenMS::FilterFunctor&)' 59 | FilterFunctor & operator=(const FilterFunctor & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NeutralLossDiffFilter.h:71:29: note: by 'OpenMS::NeutralLossDiffFilter& OpenMS::NeutralLossDiffFilter::operator=(const OpenMS::NeutralLossDiffFilter&)' 71 | NeutralLossDiffFilter & operator=(const NeutralLossDiffFilter & source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/NeutralLossMarker.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/NeutralLossMarker.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/NeutralLossMarker.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/NeutralLossMarker.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/NeutralLossMarker.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/PeakMarker.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NeutralLossMarker.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/NeutralLossMarker.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/PeakMarker.h:62:18: note: by 'OpenMS::PeakMarker& OpenMS::PeakMarker::operator=(const OpenMS::PeakMarker&)' 62 | PeakMarker & operator=(const PeakMarker & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NeutralLossMarker.h:71:25: note: by 'OpenMS::NeutralLossMarker& OpenMS::NeutralLossMarker::operator=(const OpenMS::NeutralLossMarker&)' 71 | NeutralLossMarker & operator=(const NeutralLossMarker & source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/NLargest.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/NLargest.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/NLargest.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/NLargest.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/NLargest.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NLargest.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/NLargest.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NLargest.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NLargest.h:72:16: note: by 'OpenMS::NLargest& OpenMS::NLargest::operator=(const OpenMS::NLargest&)' 72 | NLargest & operator=(const NLargest & source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/Normalizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/Normalizer.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/Normalizer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/Normalizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/Normalizer.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/Normalizer.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h:39: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h:70:18: note: by 'OpenMS::Normalizer& OpenMS::Normalizer::operator=(const OpenMS::Normalizer&)' 70 | Normalizer & operator=(const Normalizer & source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/PeakMarker.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/PeakMarker.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/PeakMarker.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/PeakMarker.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/PeakMarker.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/PeakMarker.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/PeakMarker.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/PeakMarker.h:62:18: note: by 'OpenMS::PeakMarker& OpenMS::PeakMarker::operator=(const OpenMS::PeakMarker&)' 62 | PeakMarker & operator=(const PeakMarker & source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ParentPeakMower.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ParentPeakMower.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ParentPeakMower.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ParentPeakMower.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/ParentPeakMower.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ParentPeakMower.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/ParentPeakMower.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ParentPeakMower.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ParentPeakMower.h:74:22: note: by 'OpenMS::ParentPeakMower& OpenMS::ParentPeakMower::operator=(const OpenMS::ParentPeakMower&)' 74 | ParentPeakMower& operator=(const ParentPeakMower& source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/Scaler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/Scaler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/Scaler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/Scaler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/Scaler.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Scaler.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/Scaler.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Scaler.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Scaler.h:66:14: note: by 'OpenMS::Scaler& OpenMS::Scaler::operator=(const OpenMS::Scaler&)' 66 | Scaler & operator=(const Scaler & source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/SqrtMower.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/SqrtMower.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/SqrtMower.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/SqrtMower.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/SqrtMower.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SqrtMower.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/SqrtMower.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SqrtMower.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SqrtMower.h:66:17: note: by 'OpenMS::SqrtMower& OpenMS::SqrtMower::operator=(const OpenMS::SqrtMower&)' 66 | SqrtMower & operator=(const SqrtMower & source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/SpectraMerger.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/SpectraMerger.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/SpectraMerger.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/SpectraMerger.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/SpectraMerger.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/SpectraMerger.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:41: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h:49: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:73:35: note: by 'OpenMS::BinnedSpectrumCompareFunctor& OpenMS::BinnedSpectrumCompareFunctor::operator=(const OpenMS::BinnedSpectrumCompareFunctor&)' 73 | BinnedSpectrumCompareFunctor& operator=(const BinnedSpectrumCompareFunctor& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:42: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h:84:25: note: by 'OpenMS::SpectrumAlignment& OpenMS::SpectrumAlignment::operator=(const OpenMS::SpectrumAlignment&)' 84 | SpectrumAlignment & operator=(const SpectrumAlignment & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:75:11: note: by 'OpenMS::SpectraMerger::SpectraDistance_::operator=' 75 | class SpectraDistance_ : | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:146:20: note: by 'OpenMS::SpectraMerger& OpenMS::SpectraMerger::operator=(const OpenMS::SpectraMerger&)' 146 | SpectraMerger& operator=(const SpectraMerger& source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/TICFilter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/TICFilter.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/TICFilter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/TICFilter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/TICFilter.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/TICFilter.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/TICFilter.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h:59:21: note: by 'OpenMS::FilterFunctor& OpenMS::FilterFunctor::operator=(const OpenMS::FilterFunctor&)' 59 | FilterFunctor & operator=(const FilterFunctor & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/TICFilter.h:68:17: note: by 'OpenMS::TICFilter& OpenMS::TICFilter::operator=(const OpenMS::TICFilter&)' 68 | TICFilter & operator=(const TICFilter & source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ThresholdMower.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ThresholdMower.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ThresholdMower.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ThresholdMower.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/ThresholdMower.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ThresholdMower.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/ThresholdMower.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ThresholdMower.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ThresholdMower.h:66:22: note: by 'OpenMS::ThresholdMower& OpenMS::ThresholdMower::operator=(const OpenMS::ThresholdMower&)' 66 | ThresholdMower & operator=(const ThresholdMower & source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/WindowMower.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/WindowMower.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/WindowMower.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/WindowMower.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/WindowMower.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/WindowMower.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/WindowMower.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/WindowMower.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/WindowMower.h:69:18: note: by 'OpenMS::WindowMower& OpenMS::WindowMower::operator=(const OpenMS::WindowMower&)' 69 | WindowMower& operator=(const WindowMower& source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/Deisotoper.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/Deisotoper.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/Deisotoper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/Deisotoper.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/DATAREDUCTION/Deisotoper.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NLargest.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/DATAREDUCTION/Deisotoper.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Peak1D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/DATAREDUCTION/Deisotoper.cpp:36: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NLargest.h:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NLargest.h:72:16: note: by 'OpenMS::NLargest& OpenMS::NLargest::operator=(const OpenMS::NLargest&)' 72 | NLargest & operator=(const NLargest & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/DATAREDUCTION/Deisotoper.cpp:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ThresholdMower.h:66:22: note: by 'OpenMS::ThresholdMower& OpenMS::ThresholdMower::operator=(const OpenMS::ThresholdMower&)' 66 | ThresholdMower & operator=(const ThresholdMower & source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/DataFilters.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/DataFilters.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/DataFilters.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/DataFilters.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/DATAREDUCTION/DataFilters.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/ElutionPeakDetection.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/ElutionPeakDetection.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/ElutionPeakDetection.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/ElutionPeakDetection.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/DATAREDUCTION/ElutionPeakDetection.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/ElutionPeakDetection.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/DATAREDUCTION/ElutionPeakDetection.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ListUtils.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/DATAREDUCTION/ElutionPeakDetection.cpp:36: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/ElutionPeakDetection.h:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/ElutionPeakDetection.h:76:23: note: by 'OpenMS::ElutionPeakDetection& OpenMS::ElutionPeakDetection::operator=(const OpenMS::ElutionPeakDetection&)' 76 | class OPENMS_DLLAPI ElutionPeakDetection : | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/DATAREDUCTION/ElutionPeakDetection.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:101:23: note: by 'OpenMS::SavitzkyGolayFilter& OpenMS::SavitzkyGolayFilter::operator=(const OpenMS::SavitzkyGolayFilter&)' 101 | class OPENMS_DLLAPI SavitzkyGolayFilter : | ^~~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/IsotopeDistributionCache.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/IsotopeDistributionCache.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/IsotopeDistributionCache.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/IsotopeDistributionCache.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/DATAREDUCTION/IsotopeDistributionCache.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/FeatureFindingMetabo.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/FeatureFindingMetabo.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/FeatureFindingMetabo.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/FeatureFindingMetabo.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/DATAREDUCTION/FeatureFindingMetabo.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MassTrace.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/FeatureFindingMetabo.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/DATAREDUCTION/FeatureFindingMetabo.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Peak2D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MassTrace.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/FeatureFindingMetabo.h:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/FeatureFindingMetabo.h:181:23: note: by 'OpenMS::FeatureFindingMetabo& OpenMS::FeatureFindingMetabo::operator=(const OpenMS::FeatureFindingMetabo&)' 181 | class OPENMS_DLLAPI FeatureFindingMetabo : | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h:46, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathHelper.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/DATAREDUCTION/FeatureFindingMetabo.cpp:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:159:17: note: by 'OpenMS::DIAScoring& OpenMS::DIAScoring::operator=(const OpenMS::DIAScoring&)' 159 | DIAScoring& operator=(const DIAScoring& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:43: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h:83:19: note: by 'OpenMS::SONARScoring& OpenMS::SONARScoring::operator=(const OpenMS::SONARScoring&)' 83 | SONARScoring& operator=(const SONARScoring& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:44: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:90:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 90 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:90:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:109:31: note: by 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' 109 | virtual LevMarqFitter1D & operator=(const LevMarqFitter1D & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:109:31: warning: 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:62:26: note: by 'virtual OpenMS::EmgFitter1D& OpenMS::EmgFitter1D::operator=(const OpenMS::EmgFitter1D&)' 62 | virtual EmgFitter1D& operator=(const EmgFitter1D& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:26: note: by 'OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:68:16: note: by 'OpenMS::EmgModel& OpenMS::EmgModel::operator=(const OpenMS::EmgModel&)' 68 | EmgModel & operator=(const EmgModel & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:70:23: note: by 'OpenMS::GaussFilter& OpenMS::GaussFilter::operator=(const OpenMS::GaussFilter&)' 70 | class OPENMS_DLLAPI GaussFilter : | ^~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:89:23: note: by 'OpenMS::MRMFeatureFinderScoring& OpenMS::MRMFeatureFinderScoring::operator=(const OpenMS::MRMFeatureFinderScoring&)' 89 | class OPENMS_DLLAPI MRMFeatureFinderScoring : | ^~~~~~~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/SplineInterpolatedPeaks.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/SplineInterpolatedPeaks.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/SplineInterpolatedPeaks.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/SplineInterpolatedPeaks.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/DATAREDUCTION/SplineInterpolatedPeaks.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/DATAREDUCTION/SplineInterpolatedPeaks.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DRange.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/SplinePackage.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/DATAREDUCTION/SplineInterpolatedPeaks.cpp:36: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/SplinePackage.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/SplinePackage.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/SplinePackage.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/SplinePackage.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/DATAREDUCTION/SplinePackage.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/MassTraceDetection.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/MassTraceDetection.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/MassTraceDetection.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/MassTraceDetection.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/DATAREDUCTION/MassTraceDetection.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MassTrace.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/MassTraceDetection.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/DATAREDUCTION/MassTraceDetection.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Peak2D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MassTrace.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/MassTraceDetection.h:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/MassTraceDetection.h:72:25: note: by 'OpenMS::MassTraceDetection& OpenMS::MassTraceDetection::operator=(const OpenMS::MassTraceDetection&)' 72 | class OPENMS_DLLAPI MassTraceDetection : | ^~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/MZTrafoModel.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/MZTrafoModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/MZTrafoModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/MZTrafoModel.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/CALIBRATION/MZTrafoModel.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/InternalCalibration.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/InternalCalibration.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/InternalCalibration.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/InternalCalibration.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/CALIBRATION/InternalCalibration.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/CALIBRATION/InternalCalibration.h:43, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/CALIBRATION/InternalCalibration.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/LogStream.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/CALIBRATION/InternalCalibration.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/TOFCalibration.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/TOFCalibration.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/TOFCalibration.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/TOFCalibration.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/CALIBRATION/TOFCalibration.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/CALIBRATION/TOFCalibration.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/CALIBRATION/TOFCalibration.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/CALIBRATION/TOFCalibration.h:39: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/CALIBRATION/TOFCalibration.h:41: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.h:140:40: note: by 'OpenMS::OptimizePeakDeconvolution& OpenMS::OptimizePeakDeconvolution::operator=(const OpenMS::OptimizePeakDeconvolution&)' 140 | inline OptimizePeakDeconvolution & operator=(const OptimizePeakDeconvolution & opt) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.h:78:23: note: by 'OpenMS::PeakPickerCWT& OpenMS::PeakPickerCWT::operator=(const OpenMS::PeakPickerCWT&)' 78 | class OPENMS_DLLAPI PeakPickerCWT : | ^~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/CALIBRATION/TOFCalibration.h:66:23: note: by 'OpenMS::TOFCalibration& OpenMS::TOFCalibration::operator=(const OpenMS::TOFCalibration&)' 66 | class OPENMS_DLLAPI TOFCalibration : | ^~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/PrecursorCorrection.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/PrecursorCorrection.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/PrecursorCorrection.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/PrecursorCorrection.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/CALIBRATION/PrecursorCorrection.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/CALIBRATION/PrecursorCorrection.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/CALIBRATION/PrecursorCorrection.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/GaussFilterAlgorithm.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/GaussFilterAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/GaussFilterAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/GaussFilterAlgorithm.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/SMOOTHING/GaussFilterAlgorithm.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/LowessSmoothing.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/LowessSmoothing.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/LowessSmoothing.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/LowessSmoothing.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/SMOOTHING/LowessSmoothing.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/SMOOTHING/LowessSmoothing.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/SMOOTHING/LowessSmoothing.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/SMOOTHING/LowessSmoothing.h:60:23: note: by 'OpenMS::LowessSmoothing& OpenMS::LowessSmoothing::operator=(const OpenMS::LowessSmoothing&)' 60 | class OPENMS_DLLAPI LowessSmoothing : | ^~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/FastLowessSmoothing.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/FastLowessSmoothing.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/FastLowessSmoothing.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/FastLowessSmoothing.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/SMOOTHING/FastLowessSmoothing.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/GaussFilter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/GaussFilter.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/GaussFilter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/GaussFilter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/SMOOTHING/GaussFilter.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/SMOOTHING/GaussFilter.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:70:23: note: by 'OpenMS::GaussFilter& OpenMS::GaussFilter::operator=(const OpenMS::GaussFilter&)' 70 | class OPENMS_DLLAPI GaussFilter : | ^~~~~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/SMOOTHING/GaussFilter.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Constants.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Peak1D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.cpp:36: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h: In instantiation of 'class OpenMS::SignalToNoiseEstimator': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.h:70:9: required from 'class OpenMS::SignalToNoiseEstimatorMeanIterative<>' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.cpp:40:41: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:86:37: note: by 'OpenMS::SignalToNoiseEstimator& OpenMS::SignalToNoiseEstimator::operator=(const OpenMS::SignalToNoiseEstimator&) [with Container = OpenMS::MSSpectrum]' 86 | inline SignalToNoiseEstimator & operator=(const SignalToNoiseEstimator & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.h: In instantiation of 'class OpenMS::SignalToNoiseEstimatorMeanIterative<>': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.cpp:40:41: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.h:144:50: note: by 'OpenMS::SignalToNoiseEstimatorMeanIterative& OpenMS::SignalToNoiseEstimatorMeanIterative::operator=(const OpenMS::SignalToNoiseEstimatorMeanIterative&) [with Container = OpenMS::MSSpectrum]' 144 | inline SignalToNoiseEstimatorMeanIterative & operator=(const SignalToNoiseEstimatorMeanIterative & source) | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h: In instantiation of 'class OpenMS::SignalToNoiseEstimator': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:81:9: required from 'class OpenMS::SignalToNoiseEstimatorMedian<>' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.cpp:40:34: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:86:37: note: by 'OpenMS::SignalToNoiseEstimator& OpenMS::SignalToNoiseEstimator::operator=(const OpenMS::SignalToNoiseEstimator&) [with Container = OpenMS::MSSpectrum]' 86 | inline SignalToNoiseEstimator & operator=(const SignalToNoiseEstimator & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h: In instantiation of 'class OpenMS::SignalToNoiseEstimatorMedian<>': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.cpp:40:34: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:153:43: note: by 'OpenMS::SignalToNoiseEstimatorMedian& OpenMS::SignalToNoiseEstimatorMedian::operator=(const OpenMS::SignalToNoiseEstimatorMedian&) [with Container = OpenMS::MSSpectrum]' 153 | inline SignalToNoiseEstimatorMedian & operator=(const SignalToNoiseEstimatorMedian & source) | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedianRapid.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedianRapid.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedianRapid.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedianRapid.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedianRapid.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/SavitzkyGolayFilter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/SavitzkyGolayFilter.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/SavitzkyGolayFilter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/SavitzkyGolayFilter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/SMOOTHING/SavitzkyGolayFilter.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/SMOOTHING/SavitzkyGolayFilter.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:101:23: note: by 'OpenMS::SavitzkyGolayFilter& OpenMS::SavitzkyGolayFilter::operator=(const OpenMS::SavitzkyGolayFilter&)' 101 | class OPENMS_DLLAPI SavitzkyGolayFilter : | ^~~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BaseModel.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BaseModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BaseModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BaseModel.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/BaseModel.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/BaseModel.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussModel.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel_impl.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/BaseModel.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:26: note: by 'OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussModel.h:67:26: note: by 'virtual OpenMS::GaussModel& OpenMS::GaussModel::operator=(const OpenMS::GaussModel&)' 67 | virtual GaussModel & operator=(const GaussModel & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel_impl.h:41: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BiGaussModel.h:67:28: note: by 'virtual OpenMS::BiGaussModel& OpenMS::BiGaussModel::operator=(const OpenMS::BiGaussModel&)' 67 | virtual BiGaussModel & operator=(const BiGaussModel & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel_impl.h:42: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.h:78:28: note: by 'virtual OpenMS::IsotopeModel& OpenMS::IsotopeModel::operator=(const OpenMS::IsotopeModel&)' 78 | virtual IsotopeModel & operator=(const IsotopeModel & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel_impl.h:43: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeModel.h:75:36: note: by 'virtual OpenMS::ExtendedIsotopeModel& OpenMS::ExtendedIsotopeModel::operator=(const OpenMS::ExtendedIsotopeModel&)' 75 | virtual ExtendedIsotopeModel & operator=(const ExtendedIsotopeModel & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<2>': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ProductModel.h:65:12: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 2]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 2]' was hidden [-Woverloaded-virtual=] In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel_impl.h:44: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ProductModel.h:124:28: note: by 'virtual OpenMS::ProductModel<2>& OpenMS::ProductModel<2>::operator=(const OpenMS::ProductModel<2>&)' 124 | virtual ProductModel & operator=(const ProductModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel_impl.h:45: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:68:16: note: by 'OpenMS::EmgModel& OpenMS::EmgModel::operator=(const OpenMS::EmgModel&)' 68 | EmgModel & operator=(const EmgModel & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/Omake[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' penMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel_impl.h:46: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/EGHModel.h:72:24: note: by 'virtual OpenMS::EGHModel& OpenMS::EGHModel::operator=(const OpenMS::EGHModel&)' 72 | virtual EGHModel & operator=(const EGHModel & source); | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussFitter1D.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussFitter1D.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussFitter1D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussFitter1D.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussFitter1D.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BiGaussFitter1D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussFitter1D.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:90:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 90 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:90:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:70:33: note: by 'virtual OpenMS::MaxLikeliFitter1D& OpenMS::MaxLikeliFitter1D::operator=(const OpenMS::MaxLikeliFitter1D&)' 70 | virtual MaxLikeliFitter1D & operator=(const MaxLikeliFitter1D & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:70:33: warning: 'virtual OpenMS::MaxLikeliFitter1D& OpenMS::MaxLikeliFitter1D::operator=(const OpenMS::MaxLikeliFitter1D&)' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BiGaussFitter1D.h:64:31: note: by 'virtual OpenMS::BiGaussFitter1D& OpenMS::BiGaussFitter1D::operator=(const OpenMS::BiGaussFitter1D&)' 64 | virtual BiGaussFitter1D & operator=(const BiGaussFitter1D & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussFitter1D.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:26: note: by 'OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/ID/IDFilter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/ID/IDFilter.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/ID/IDFilter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/ID/IDFilter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/ID/IDFilter.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/ID/IDFilter.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63, from /usr/include/c++/13/map:62, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/AASequence.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/ProteaseDigestion.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/ID/IDFilter.cpp: In static member function 'static std::map > OpenMS::IDFilter::extractUnassignedProteins(OpenMS::ConsensusMap&)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/ID/IDFilter.cpp:261:50: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccessionUnordered]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 261 | moveMatchingItems(prot.getHits(), std::not1(acc_filter), target.first->second); | ~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65: /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/ID/IDFilter.cpp: In lambda function: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/ID/IDFilter.cpp:380:28: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccessionUnordered]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 380 | not1(acc_filter)); | ~~~~^~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/ID/IDFilter.cpp: In lambda function: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/ID/IDFilter.cpp:421:32: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccessionUnordered]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 421 | not1(acc_filter)); | ~~~~^~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/ID/IDFilter.cpp: In static member function 'static void OpenMS::IDFilter::updateProteinReferences(std::vector&, const std::vector&, bool)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/ID/IDFilter.cpp:464:28: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccessionUnordered]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 464 | not1(acc_filter)); | ~~~~^~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/ID/IDFilter.cpp: In static member function 'static void OpenMS::IDFilter::removeUngroupedProteins(const std::vector&, std::vector&)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/ID/IDFilter.cpp:532:59: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccessionUnordered]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 532 | std::remove_if(hits.begin(), hits.end(), std::not1(HasMatchingAccessionUnordered(valid_accessions))), | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::FilterPeptideEvidences(EvidenceFilter&, std::vector&) [with EvidenceFilter = DigestionFilter]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:486:68: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:728:35: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::DigestionFilter]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 728 | std::not1(filter)); | ~~~~~~~~~^~~~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::moveMatchingItems(Container&, const Predicate&, Container&) [with Container = std::vector; Predicate = std::unary_negate >]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/ID/IDFilter.cpp:261:24: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:551:73: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = unary_negate >]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 551 | auto part = std::partition(items.begin(), items.end(), std::not1(pred)); | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccessionUnordered]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/ID/IDFilter.cpp:293:24: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(comake[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' nst _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccessionUnordered]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMinPeptideLength]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/ID/IDFilter.cpp:601:26: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMinPeptideLength]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMinCharge]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/ID/IDFilter.cpp:622:24: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMinCharge]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasRTInRange]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/ID/IDFilter.cpp:640:22: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasRTInRange]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMZInRange]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/ID/IDFilter.cpp:648:22: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMZInRange]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasLowMZError]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/ID/IDFilter.cpp:658:24: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasLowMZError]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMetaValue]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/ID/IDFilter.cpp:674:24: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMetaValue]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMaxMetaValue]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/ID/IDFilter.cpp:677:24: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMaxMetaValue]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingModification]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/ID/IDFilter.cpp:726:24: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingModification]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingSequence]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/ID/IDFilter.cpp:754:24: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingSequence]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1138:24: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1147:26: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1358:31: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1368:35: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussModel.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussModel.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussModel.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BiGaussModel.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussModel.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:26: note: by 'OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BiGaussModel.h:67:28: note: by 'virtual OpenMS::BiGaussModel& OpenMS::BiGaussModel::operator=(const OpenMS::BiGaussModel&)' 67 | virtual BiGaussModel & operator=(const BiGaussModel & source); | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:94:18: note: by 'OpenMS::TraceFitter& OpenMS::TraceFitter::operator=(const OpenMS::TraceFitter&)' 94 | TraceFitter& operator=(const TraceFitter& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.h:82:21: note: by 'OpenMS::EGHTraceFitter& OpenMS::EGHTraceFitter::operator=(const OpenMS::EGHTraceFitter&)' 82 | EGHTraceFitter& operator=(const EGHTraceFitter& source); | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.h:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:94:18: note: by 'OpenMS::TraceFitter& OpenMS::TraceFitter::operator=(const OpenMS::TraceFitter&)' 94 | TraceFitter& operator=(const TraceFitter& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.h:49:23: note: by 'OpenMS::ElutionModelFitter& OpenMS::ElutionModelFitter::operator=(const OpenMS::ElutionModelFitter&)' 49 | class OPENMS_DLLAPI ElutionModelFitter : | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.cpp:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.h:82:21: note: by 'OpenMS::EGHTraceFitter& OpenMS::EGHTraceFitter::operator=(const OpenMS::EGHTraceFitter&)' 82 | EGHTraceFitter& operator=(const EGHTraceFitter& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.cpp:41: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.h:57:23: note: by 'OpenMS::GaussTraceFitter& OpenMS::GaussTraceFitter::operator=(const OpenMS::GaussTraceFitter&)' 57 | GaussTraceFitter& operator=(const GaussTraceFitter& source); | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:90:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 90 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:90:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:109:31: note: by 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' 109 | virtual LevMarqFitter1D & operator=(const LevMarqFitter1D & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:109:31: warning: 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:62:26: note: by 'virtual OpenMS::EmgFitter1D& OpenMS::EmgFitter1D::operator=(const OpenMS::EmgFitter1D&)' 62 | virtual EmgFitter1D& operator=(const EmgFitter1D& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:26: note: by 'OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgModel.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgModel.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EmgModel.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EmgModel.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:26: note: by 'OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:68:16: note: by 'OpenMS::EmgModel& OpenMS::EmgModel::operator=(const OpenMS::EmgModel&)' 68 | EmgModel & operator=(const EmgModel & source); | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeModel.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeModel.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeModel.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeModel.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeModel.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:26: note: by 'OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeModel.h:75:36: note: by 'virtual OpenMS::ExtendedIsotopeModel& OpenMS::ExtendedIsotopeModel::operator=(const OpenMS::ExtendedIsotopeModel&)' 75 | virtual ExtendedIsotopeModel & operator=(const ExtendedIsotopeModel & source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeFitter1D.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeFitter1D.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeFitter1D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeFitter1D.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeFitter1D.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeFitter1D.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeFitter1D.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:90:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 90 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:90:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:70:33: note: by 'virtual OpenMS::MaxLikeliFitter1D& OpenMS::MaxLikeliFitter1D::operator=(const OpenMS::MaxLikeliFitter1D&)' 70 | virtual MaxLikeliFitter1D & operator=(const MaxLikeliFitter1D & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:70:33: warning: 'virtual OpenMS::MaxLikeliFitter1D& OpenMS::MaxLikeliFitter1D::operator=(const OpenMS::MaxLikeliFitter1D&)' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeFitter1D.h:61:39: note: by 'virtual OpenMS::ExtendedIsotopeFitter1D& OpenMS::ExtendedIsotopeFitter1D::operator=(const OpenMS::ExtendedIsotopeFitter1D&)' 61 | virtual ExtendedIsotopeFitter1D & operator=(const ExtendedIsotopeFitter1D & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeFitter1D.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:26: note: by 'OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/IsotopeCluster.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderDefs.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:150:29: note: by 'OpenMS::FeatureFinderAlgorithm& OpenMS::FeatureFinderAlgorithm::operator=(const OpenMS::FeatureFinderAlgorithm&)' 150 | FeatureFinderAlgorithm& operator=(const FeatureFinderAlgorithm&); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:150:29: note: by 'OpenMS::FeatureFinderAlgorithm& OpenMS::FeatureFinderAlgorithm::operator=(const OpenMS::FeatureFinderAlgorithm&)' 150 | FeatureFinderAlgorithm& operator=(const FeatureFinderAlgorithm&); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.h:59:23: note: by 'OpenMS::FeatureFinderAlgorithmIsotopeWavelet& OpenMS::FeatureFinderAlgorithmIsotopeWavelet::operator=(const OpenMS::FeatureFinderAlgorithmIsotopeWavelet&)' 59 | class OPENMS_DLLAPI FeatureFinderAlgorithmIsotopeWavelet : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.h:59:23: note: by 'OpenMS::FeatureFinderAlgorithmMRM::operator=' 59 | class OPENMS_DLLAPI FeatureFinderAlgorithmMRM : | ^~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:94:18: note: by 'OpenMS::TraceFitter& OpenMS::TraceFitter::operator=(const OpenMS::TraceFitter&)' 94 | TraceFitter& operator=(const TraceFitter& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.h:309:35: note: by 'OpenMS::FeatureFinderAlgorithmPicked& OpenMS::FeatureFinderAlgorithmPicked::operator=(const OpenMS::FeatureFinderAlgorithmPicked&)' 309 | FeatureFinderAlgorithmPicked& operator=(const FeatureFinderAlgorithmPicked&); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:150:29: note: by 'OpenMS::FeatureFinderAlgorithm& OpenMS::FeatureFinderAlgorithm::operator=(const OpenMS::FeatureFinderAlgorithm&)' 150 | FeatureFinderAlgorithm& operator=(const FeatureFinderAlgorithm&); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.h:59:23: note: by 'OpenMS::FeatureFinderAlgorithmIsotopeWavelet& OpenMS::FeatureFinderAlgorithmIsotopeWavelet::operator=(const OpenMS::FeatureFinderAlgorithmIsotopeWavelet&)' 59 | class OPENMS_DLLAPI FeatureFinderAlgorithmIsotopeWavelet : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp:34: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:150:29: note: by 'OpenMS::FeatureFinderAlgorithm& OpenMS::FeatureFinderAlgorithm::operator=(const OpenMS::FeatureFinderAlgorithm&)' 150 | FeatureFinderAlgorithm& operator=(const FeatureFinderAlgorithm&); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.h:59:23: note: by 'OpenMS::FeatureFinderAlgorithmMRM::operator=' 59 | class OPENMS_DLLAPI FeatureFinderAlgorithmMRM : | ^~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ProductModel.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ProductModel.h:41: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:26: note: by 'OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.h:78:28: note: by 'virtual OpenMS::IsotopeModel& OpenMS::IsotopeModel::operator=(const OpenMS::IsotopeModel&)' 78 | virtual IsotopeModel & operator=(const IsotopeModel & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<2>': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ProductModel.h:65:12: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 2]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 2]' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ProductModel.h:124:28: note: by 'virtual OpenMS::ProductModel<2>& OpenMS::ProductModel<2>::operator=(const OpenMS::ProductModel<2>&)' 124 | virtual ProductModel & operator=(const ProductModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:90:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 90 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:90:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:109:31: note: by 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' 109 | virtual LevMarqFitter1D & operator=(const LevMarqFitter1D & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:109:31: warning: 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:62:26: note: by 'virtual OpenMS::EmgFitter1D& OpenMS::EmgFitter1D::operator=(const OpenMS::EmgFitter1D&)' 62 | virtual EmgFitter1D& operator=(const EmgFitter1D& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:68:16: note: by 'OpenMS::EmgModel& OpenMS::EmgModel::operator=(const OpenMS::EmgModel&)' 68 | EmgModel & operator=(const EmgModel & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:70:23: note: by 'OpenMS::GaussFilter& OpenMS::GaussFilter::operator=(const OpenMS::GaussFilter&)' 70 | class OPENMS_DLLAPI GaussFilter : | ^~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp:42: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:61:23: note: by 'OpenMS::LinearResampler& OpenMS::LinearResampler::operator=(const OpenMS::LinearResampler&)' 61 | class OPENMS_DLLAPI LinearResampler : | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h: In instantiation of 'class OpenMS::SignalToNoiseEstimator': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.h:70:9: required from 'class OpenMS::SignalToNoiseEstimatorMeanIterative' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp:77:55: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp:41: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:86:37: note: by 'OpenMS::SignalToNoiseEstimator& OpenMS::SignalToNoiseEstimator::operator=(const OpenMS::SignalToNoiseEstimator&) [with Container = OpenMS::MSSpectrum]' 86 | inline SignalToNoiseEstimator & operator=(const SignalToNoiseEstimator & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.h: In instantiation of 'class OpenMS::SignalToNoiseEstimatorMeanIterative': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp:77:55: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.h:144:50: note: by 'OpenMS::SignalToNoiseEstimatorMeanIterative& OpenMS::SignalToNoiseEstimatorMeanIterative::operator=(const OpenMS::SignalToNoiseEstimatorMeanIterative&) [with Container = OpenMS::MSSpectrum]' 144 | inline SignalToNoiseEstimatorMeanIterative & operator=(const SignalToNoiseEstimatorMeanIterative & source) | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:150:29: note: by 'OpenMS::FeatureFinderAlgorithm& OpenMS::FeatureFinderAlgorithm::operator=(const OpenMS::FeatureFinderAlgorithm&)' 150 | FeatureFinderAlgorithm& operator=(const FeatureFinderAlgorithm&); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.h:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:94:18: note: by 'OpenMS::TraceFitter& OpenMS::TraceFitter::operator=(const OpenMS::TraceFitter&)' 94 | TraceFitter& operator=(const TraceFitter& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.h:309:35: note: by 'OpenMS::FeatureFinderAlgorithmPicked& OpenMS::FeatureFinderAlgorithmPicked::operator=(const OpenMS::FeatureFinderAlgorithmPicked&)' 309 | FeatureFinderAlgorithmPicked& operator=(const FeatureFinderAlgorithmPicked&); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.h:82:21: note: by 'OpenMS::EGHTraceFitter& OpenMS::EGHTraceFitter::operator=(const OpenMS::EGHTraceFitter&)' 82 | EGHTraceFitter& operator=(const EGHTraceFitter& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.h:57:23: note: by 'OpenMS::GaussTraceFitter& OpenMS::GaussTraceFitter::operator=(const OpenMS::GaussTraceFitter&)' 57 | GaussTraceFitter& operator=(const GaussTraceFitter& source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h:46, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:159:17: note: by 'OpenMS::DIAScoring& OpenMS::DIAScoring::operator=(const OpenMS::DIAScoring&)' 159 | DIAScoring& operator=(const DIAScoring& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:43: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h:83:19: note: by 'OpenMS::SONARScoring& OpenMS::SONARScoring::operator=(const OpenMS::SONARScoring&)' 83 | SONARScoring& operator=(const SONARScoring& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:44: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:90:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 90 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:90:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:109:31: note: by 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' 109 | virtual LevMarqFitter1D & operator=(const LevMarqFitter1D & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:109:31: warning: 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:62:26: note: by 'virtual OpenMS::EmgFitter1D& OpenMS::EmgFitter1D::operator=(const OpenMS::EmgFitter1D&)' 62 | virtual EmgFitter1D& operator=(const EmgFitter1D& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:26: note: by 'OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:68:16: note: by 'OpenMS::EmgModel& OpenMS::EmgModel::operator=(const OpenMS::EmgModel&)' 68 | EmgModel & operator=(const EmgModel & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:70:23: note: by 'OpenMS::GaussFilter& OpenMS::GaussFilter::operator=(const OpenMS::GaussFilter&)' 70 | class OPENMS_DLLAPI GaussFilter : | ^~~~~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/Openmake[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' MS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:49: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperimentHelper.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:89:23: note: by 'OpenMS::MRMFeatureFinderScoring& OpenMS::MRMFeatureFinderScoring::operator=(const OpenMS::MRMFeatureFinderScoring&)' 89 | class OPENMS_DLLAPI MRMFeatureFinderScoring : | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.h:56:21: note: by 'OpenMS::FeatureFinderIdentificationAlgorithm::operator=' 56 | class OPENMS_DLLAPI FeatureFinderIdentificationAlgorithm : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:94:18: note: by 'OpenMS::TraceFitter& OpenMS::TraceFitter::operator=(const OpenMS::TraceFitter&)' 94 | TraceFitter& operator=(const TraceFitter& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.h:82:21: note: by 'OpenMS::EGHTraceFitter& OpenMS::EGHTraceFitter::operator=(const OpenMS::EGHTraceFitter&)' 82 | EGHTraceFitter& operator=(const EGHTraceFitter& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.h:49:23: note: by 'OpenMS::ElutionModelFitter& OpenMS::ElutionModelFitter::operator=(const OpenMS::ElutionModelFitter&)' 49 | class OPENMS_DLLAPI ElutionModelFitter : | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.h:57:23: note: by 'OpenMS::GaussTraceFitter& OpenMS::GaussTraceFitter::operator=(const OpenMS::GaussTraceFitter&)' 57 | GaussTraceFitter& operator=(const GaussTraceFitter& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp:44: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/SVM/SimpleSVM.h:65:23: note: by 'OpenMS::SimpleSVM& OpenMS::SimpleSVM::operator=(const OpenMS::SimpleSVM&)' 65 | class OPENMS_DLLAPI SimpleSVM : | ^~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp:45: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.h:363:42: note: by 'OpenMS::MapAlignmentAlgorithmIdentification& OpenMS::MapAlignmentAlgorithmIdentification::operator=(const OpenMS::MapAlignmentAlgorithmIdentification&)' 363 | MapAlignmentAlgorithmIdentification& operator=(const MapAlignmentAlgorithmIdentification&); | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMetaboIdent.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMetaboIdent.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMetaboIdent.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMetaboIdent.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMetaboIdent.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h:46, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMetaboIdent.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMetaboIdent.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:159:17: note: by 'OpenMS::DIAScoring& OpenMS::DIAScoring::operator=(const OpenMS::DIAScoring&)' 159 | DIAScoring& operator=(const DIAScoring& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:43: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h:83:19: note: by 'OpenMS::SONARScoring& OpenMS::SONARScoring::operator=(const OpenMS::SONARScoring&)' 83 | SONARScoring& operator=(const SONARScoring& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:44: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:90:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 90 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:90:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:109:31: note: by 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' 109 | virtual LevMarqFitter1D & operator=(const LevMarqFitter1D & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:109:31: warning: 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:62:26: note: by 'virtual OpenMS::EmgFitter1D& OpenMS::EmgFitter1D::operator=(const OpenMS::EmgFitter1D&)' 62 | virtual EmgFitter1D& operator=(const EmgFitter1D& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:26: note: by 'OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:68:16: note: by 'OpenMS::EmgModel& OpenMS::EmgModel::operator=(const OpenMS::EmgModel&)' 68 | EmgModel & operator=(const EmgModel & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:70:23: note: by 'OpenMS::GaussFilter& OpenMS::GaussFilter::operator=(const OpenMS::GaussFilter&)' 70 | class OPENMS_DLLAPI GaussFilter : | ^~~~~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:49: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperimentHelper.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMetaboIdent.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:89:23: note: by 'OpenMS::MRMFeatureFinderScoring& OpenMS::MRMFeatureFinderScoring::operator=(const OpenMS::MRMFeatureFinderScoring&)' 89 | class OPENMS_DLLAPI MRMFeatureFinderScoring : | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMetaboIdent.h:53:21: note: by 'OpenMS::FeatureFinderAlgorithmMetaboIdent::operator=' 53 | class OPENMS_DLLAPI FeatureFinderAlgorithmMetaboIdent : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMetaboIdent.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:94:18: note: by 'OpenMS::TraceFitter& OpenMS::TraceFitter::operator=(const OpenMS::TraceFitter&)' 94 | TraceFitter& operator=(const TraceFitter& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.h:82:21: note: by 'OpenMS::EGHTraceFitter& OpenMS::EGHTraceFitter::operator=(const OpenMS::EGHTraceFitter&)' 82 | EGHTraceFitter& operator=(const EGHTraceFitter& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMetaboIdent.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.h:49:23: note: by 'OpenMS::ElutionModelFitter& OpenMS::ElutionModelFitter::operator=(const OpenMS::ElutionModelFitter&)' 49 | class OPENMS_DLLAPI ElutionModelFitter : | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMetaboIdent.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.h:57:23: note: by 'OpenMS::GaussTraceFitter& OpenMS::GaussTraceFitter::operator=(const OpenMS::GaussTraceFitter&)' 57 | GaussTraceFitter& operator=(const GaussTraceFitter& source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:90:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 90 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:90:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:70:33: note: by 'virtual OpenMS::MaxLikeliFitter1D& OpenMS::MaxLikeliFitter1D::operator=(const OpenMS::MaxLikeliFitter1D&)' 70 | virtual MaxLikeliFitter1D & operator=(const MaxLikeliFitter1D & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:70:33: warning: 'virtual OpenMS::MaxLikeliFitter1D& OpenMS::MaxLikeliFitter1D::operator=(const OpenMS::MaxLikeliFitter1D&)' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.h:62:29: note: by 'virtual OpenMS::GaussFitter1D& OpenMS::GaussFitter1D::operator=(const OpenMS::GaussFitter1D&)' 62 | virtual GaussFitter1D & operator=(const GaussFitter1D & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:70:33: warning: 'virtual OpenMS::MaxLikeliFitter1D& OpenMS::MaxLikeliFitter1D::operator=(const OpenMS::MaxLikeliFitter1D&)' was hidden [-Woverloaded-virtual=] 70 | virtual MaxLikeliFitter1D & operator=(const MaxLikeliFitter1D & source) | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BiGaussFitter1D.h:64:31: note: by 'virtual OpenMS::BiGaussFitter1D& OpenMS::BiGaussFitter1D::operator=(const OpenMS::BiGaussFitter1D&)' 64 | virtual BiGaussFitter1D & operator=(const BiGaussFitter1D & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:70:33: warning: 'virtual OpenMS::MaxLikeliFitter1D& OpenMS::MaxLikeliFitter1D::operator=(const OpenMS::MaxLikeliFitter1D&)' was hidden [-Woverloaded-virtual=] 70 | virtual MaxLikeliFitter1D & operator=(const MaxLikeliFitter1D & source) | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.cpp:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.h:61:31: note: by 'virtual OpenMS::IsotopeFitter1D& OpenMS::IsotopeFitter1D::operator=(const OpenMS::IsotopeFitter1D&)' 61 | virtual IsotopeFitter1D & operator=(const IsotopeFitter1D & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:70:33: warning: 'virtual OpenMS::MaxLikeliFitter1D& OpenMS::MaxLikeliFitter1D::operator=(const OpenMS::MaxLikeliFitter1D&)' was hidden [-Woverloaded-virtual=] 70 | virtual MaxLikeliFitter1D & operator=(const MaxLikeliFitter1D & source) | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.cpp:41: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeFitter1D.h:61:39: note: by 'virtual OpenMS::ExtendedIsotopeFitter1D& OpenMS::ExtendedIsotopeFitter1D::operator=(const OpenMS::ExtendedIsotopeFitter1D&)' 61 | virtual ExtendedIsotopeFitter1D & operator=(const ExtendedIsotopeFitter1D & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:90:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] 90 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.cpp:42: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:109:31: note: by 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' 109 | virtual LevMarqFitter1D & operator=(const LevMarqFitter1D & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:109:31: warning: 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:62:26: note: by 'virtual OpenMS::EmgFitter1D& OpenMS::EmgFitter1D::operator=(const OpenMS::EmgFitter1D&)' 62 | virtual EmgFitter1D& operator=(const EmgFitter1D& source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:90:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 90 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:90:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:70:33: note: by 'virtual OpenMS::MaxLikeliFitter1D& OpenMS::MaxLikeliFitter1D::operator=(const OpenMS::MaxLikeliFitter1D&)' 70 | virtual MaxLikeliFitter1D & operator=(const MaxLikeliFitter1D & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:70:33: warning: 'virtual OpenMS::MaxLikeliFitter1D& OpenMS::MaxLikeliFitter1D::operator=(const OpenMS::MaxLikeliFitter1D&)' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.h:62:29: note: by 'virtual OpenMS::GaussFitter1D& OpenMS::GaussFitter1D::operator=(const OpenMS::GaussFitter1D&)' 62 | virtual GaussFitter1D & operator=(const GaussFitter1D & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:26: note: by 'OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.h:56:21: note: by 'OpenMS::FeatureFinderMultiplexAlgorithm::operator=' 56 | class OPENMS_DLLAPI FeatureFinderMultiplexAlgorithm : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.h:60:23: note: by 'OpenMS::MultiplexDeltaMassesGenerator::operator=' 60 | class OPENMS_DLLAPI MultiplexDeltaMassesGenerator : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringCentroided.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.cpp:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.cpp:45: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/MATH/MISC/EmgGradientDescent.h:64:23: note: by 'OpenMS::EmgGradientDescent& OpenMS::EmgGradientDescent::operator=(const OpenMS::EmgGradientDescent&)' 64 | class OPENMS_DLLAPI EmgGradientDescent : | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h:72:23: note: by 'OpenMS::PeakIntegrator& OpenMS::PeakIntegrator::operator=(const OpenMS::PeakIntegrator&)' 72 | class OPENMS_DLLAPI PeakIntegrator : | ^~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussModel.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussModel.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/GaussModel.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussModel.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/GaussModel.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:26: note: by 'OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussModel.h:67:26: note: by 'virtual OpenMS::GaussModel& OpenMS::GaussModel::operator=(const OpenMS::GaussModel&)' 67 | virtual GaussModel & operator=(const GaussModel & source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:94:18: note: by 'OpenMS::TraceFitter& OpenMS::TraceFitter::operator=(const OpenMS::TraceFitter&)' 94 | TraceFitter& operator=(const TraceFitter& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.h:57:23: note: by 'OpenMS::GaussTraceFitter& OpenMS::GaussTraceFitter::operator=(const OpenMS::GaussTraceFitter&)' 57 | GaussTraceFitter& operator=(const GaussTraceFitter& source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:26: note: by 'OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.h:78:28: note: by 'virtual OpenMS::IsotopeModel& OpenMS::IsotopeModel::operator=(const OpenMS::IsotopeModel&)' 78 | virtual IsotopeModel & operator=(const IsotopeModel & source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:90:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 90 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:90:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:70:33: note: by 'virtual OpenMS::MaxLikeliFitter1D& OpenMS::MaxLikeliFitter1D::operator=(const OpenMS::MaxLikeliFitter1D&)' 70 | virtual MaxLikeliFitter1D & operator=(const MaxLikeliFitter1D & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:70:33: warning: 'virtual OpenMS::MaxLikeliFitter1D& OpenMS::MaxLikeliFitter1D::operator=(const OpenMS::MaxLikeliFitter1D&)' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.h:61:31: note: by 'virtual OpenMS::IsotopeFitter1D& OpenMS::IsotopeFitter1D::operator=(const OpenMS::IsotopeFitter1D&)' 61 | virtual IsotopeFitter1D & operator=(const IsotopeFitter1D & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:26: note: by 'OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.h:78:28: note: by 'virtual OpenMS::IsotopeModel& OpenMS::IsotopeModel::operator=(const OpenMS::IsotopeModel&)' 78 | virtual IsotopeModel & operator=(const IsotopeModel & source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletTransform.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletTransform.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletTransform.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletTransform.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletTransform.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWavelet.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWavelet.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWavelet.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWavelet.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWavelet.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:90:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 90 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:90:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:70:33: note: by 'virtual OpenMS::MaxLikeliFitter1D& OpenMS::MaxLikeliFitter1D::operator=(const OpenMS::MaxLikeliFitter1D&)' 70 | virtual MaxLikeliFitter1D & operator=(const MaxLikeliFitter1D & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:26: note: by 'OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ModelDescription.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ModelDescription.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ModelDescription.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ModelDescription.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ModelDescription.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexClustering.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexClustering.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexClustering.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexClustering.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexClustering.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexClustering.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexClustering.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMasses.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMasses.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMasses.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMasses.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMasses.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:90:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 90 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:90:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:109:31: note: by 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' 109 | virtual LevMarqFitter1D & operator=(const LevMarqFitter1D & source) | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.h:60:23: note: by 'OpenMS::MultiplexDeltaMassesGenerator::operator=' 60 | class OPENMS_DLLAPI MultiplexDeltaMassesGenerator : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredPeak.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredPeak.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredPeak.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredPeak.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredPeak.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredMSExperiment.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredMSExperiment.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredMSExperiment.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredMSExperiment.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredMSExperiment.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredMSExperiment.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Constants.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredMSExperiment.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFiltering.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFiltering.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFiltering.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFiltering.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFiltering.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFiltering.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Peak2D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFiltering.cpp:36: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFiltering.cpp:41: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringCentroided.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringCentroided.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringCentroided.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringCentroided.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringCentroided.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringCentroided.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Peak2D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringCentroided.cpp:36: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexIsotopicPeakPattern.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexIsotopicPeakPattern.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexIsotopicPeakPattern.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexIsotopicPeakPattern.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexIsotopicPeakPattern.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteCentroided.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteCentroided.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteCentroided.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteCentroided.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteCentroided.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Peak2D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.cpp:36: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/MATH/MISC/BSpline2d.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.h:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ProductModel.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ProductModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ProductModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ProductModel.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ProductModel.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteProfile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteProfile.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteProfile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteProfile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteProfile.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteProfile.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Peak2D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransform.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransform.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransform.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransform.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransform.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransformNumIntegration.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransformNumIntegration.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransformNumIntegration.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransformNumIntegration.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransformNumIntegration.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:94:18: note: by 'OpenMS::TraceFitter& OpenMS::TraceFitter::operator=(const OpenMS::TraceFitter&)' 94 | TraceFitter& operator=(const TraceFitter& source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.h:140:40: note: by 'OpenMS::OptimizePeakDeconvolution& OpenMS::OptimizePeakDeconvolution::operator=(const OpenMS::OptimizePeakDeconvolution&)' 140 | inline OptimizePeakDeconvolution & operator=(const OptimizePeakDeconvolution & opt) | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/OptimizePick.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/OptimizePick.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/OptimizePick.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/OptimizePick.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/RAW2PEAK/OptimizePick.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.h:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.h:41: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.h:140:40: note: by 'OpenMS::OptimizePeakDeconvolution& OpenMS::OptimizePeakDeconvolution::operator=(const OpenMS::OptimizePeakDeconvolution&)' 140 | inline OptimizePeakDeconvolution & operator=(const OptimizePeakDeconvolution & opt) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.h:78:23: note: by 'OpenMS::PeakPickerCWT& OpenMS::PeakPickerCWT::operator=(const OpenMS::PeakPickerCWT&)' 78 | class OPENMS_DLLAPI PeakPickerCWT : | ^~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.h:102:23: note: by 'OpenMS::TwoDOptimization& OpenMS::TwoDOptimization::operator=(const OpenMS::TwoDOptimization&)' 102 | TwoDOptimization& operator=(const TwoDOptimization& opt); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/TICFilter.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h:59:21: note: by 'OpenMS::FilterFunctor& OpenMS::FilterFunctor::operator=(const OpenMS::FilterFunctor&)' 59 | FilterFunctor & operator=(const FilterFunctor & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/TICFilter.h:68:17: note: by 'OpenMS::TICFilter& OpenMS::TICFilter::operator=(const OpenMS::TICFilter&)' 68 | TICFilter & operator=(const TICFilter & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h: In instantiation of 'class OpenMS::SignalToNoiseEstimator': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.h:70:9: required from 'class OpenMS::SignalToNoiseEstimatorMeanIterative' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.cpp:168:53: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:86:37: note: by 'OpenMS::SignalToNoiseEstimator& OpenMS::SignalToNoiseEstimator::operator=(const OpenMS::SignalToNoiseEstimator&) [with Container = OpenMS::MSSpectrum]' 86 | inline SignalToNoiseEstimator & operator=(const SignalToNoiseEstimator & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.h: In instantiation of 'class OpenMS::SignalToNoiseEstimatorMeanIterative': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.cpp:168:53: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.h:144:50: note: by 'OpenMS::SignalToNoiseEstimatorMeanIterative& OpenMS::SignalToNoiseEstimatorMeanIterative::operator=(const OpenMS::SignalToNoiseEstimatorMeanIterative&) [with Container = OpenMS::MSSpectrum]' 144 | inline SignalToNoiseEstimatorMeanIterative & operator=(const SignalToNoiseEstimatorMeanIterative & source) | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 85%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.h:97:23: note: by 'OpenMS::PeakPickerIterative& OpenMS::PeakPickerIterative::operator=(const OpenMS::PeakPickerIterative&)' 97 | class OPENMS_DLLAPI PeakPickerIterative : | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h: In instantiation of 'class OpenMS::SignalToNoiseEstimator': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:81:9: required from 'class OpenMS::SignalToNoiseEstimatorMedian' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.h:213:20: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.h:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:86:37: note: by 'OpenMS::SignalToNoiseEstimator& OpenMS::SignalToNoiseEstimator::operator=(const OpenMS::SignalToNoiseEstimator&) [with Container = OpenMS::MSSpectrum]' 86 | inline SignalToNoiseEstimator & operator=(const SignalToNoiseEstimator & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h: In instantiation of 'class OpenMS::SignalToNoiseEstimatorMedian': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.h:213:20: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:153:43: note: by 'OpenMS::SignalToNoiseEstimatorMedian& OpenMS::SignalToNoiseEstimatorMedian::operator=(const OpenMS::SignalToNoiseEstimatorMedian&) [with Container = OpenMS::MSSpectrum]' 153 | inline SignalToNoiseEstimatorMedian & operator=(const SignalToNoiseEstimatorMedian & source) | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 85%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerMaxima.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerMaxima.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerMaxima.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerMaxima.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerMaxima.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 85%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h: In instantiation of 'class OpenMS::SignalToNoiseEstimator': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:81:9: required from 'class OpenMS::SignalToNoiseEstimatorMedian' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp:76:83: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:86:37: note: by 'OpenMS::SignalToNoiseEstimator& OpenMS::SignalToNoiseEstimator::operator=(const OpenMS::SignalToNoiseEstimator&) [with Container = OpenMS::MSSpectrum]' 86 | inline SignalToNoiseEstimator & operator=(const SignalToNoiseEstimator & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h: In instantiation of 'class OpenMS::SignalToNoiseEstimatorMedian': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp:76:83: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:153:43: note: by 'OpenMS::SignalToNoiseEstimatorMedian& OpenMS::SignalToNoiseEstimatorMedian::operator=(const OpenMS::SignalToNoiseEstimatorMedian&) [with Container = OpenMS::MSSpectrum]' 153 | inline SignalToNoiseEstimatorMedian & operator=(const SignalToNoiseEstimatorMedian & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h: In instantiation of 'class OpenMS::SignalToNoiseEstimator': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:81:9: required from 'class OpenMS::SignalToNoiseEstimatorMedian' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp:142:51: required from 'void OpenMS::PeakPickerHiRes::pick_(const ContainerType&, ContainerType&, std::vector&, bool) const [with ContainerType = OpenMS::MSChromatogram]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp:116:10: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:86:37: note: by 'OpenMS::SignalToNoiseEstimator& OpenMS::SignalToNoiseEstimator::operator=(const OpenMS::SignalToNoiseEstimator&) [with Container = OpenMS::MSChromatogram]' 86 | inline SignalToNoiseEstimator & operator=(const SignalToNoiseEstimator & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h: In instantiation of 'class OpenMS::SignalToNoiseEstimatorMedian': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp:142:51: required from 'void OpenMS::PeakPickerHiRes::pick_(const ContainerType&, ContainerType&, std::vector&, bool) const [with ContainerType = OpenMS::MSChromatogram]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp:116:10: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:153:43: note: by 'OpenMS::SignalToNoiseEstimatorMedian& OpenMS::SignalToNoiseEstimatorMedian::operator=(const OpenMS::SignalToNoiseEstimatorMedian&) [with Container = OpenMS::MSChromatogram]' 153 | inline SignalToNoiseEstimatorMedian & operator=(const SignalToNoiseEstimatorMedian & source) | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 85%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakShape.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakShape.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakShape.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakShape.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakShape.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 85%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.h:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.h:48:23: note: by 'OpenMS::PeakPickerSH& OpenMS::PeakPickerSH::operator=(const OpenMS::PeakPickerSH&)' 48 | class OPENMS_DLLAPI PeakPickerSH : | ^~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 85%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/AverageLinkage.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/AverageLinkage.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/AverageLinkage.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/AverageLinkage.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/CLUSTERING/AverageLinkage.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 85%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusterAnalyzer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusterAnalyzer.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusterAnalyzer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusterAnalyzer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/CLUSTERING/ClusterAnalyzer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 85%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusterFunctor.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusterFunctor.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusterFunctor.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusterFunctor.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/CLUSTERING/ClusterFunctor.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 85%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusterHierarchical.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusterHierarchical.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusterHierarchical.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusterHierarchical.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/CLUSTERING/ClusterHierarchical.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/CLUSTERING/ClusterHierarchical.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h:49: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:73:35: note: by 'OpenMS::BinnedSpectrumCompareFunctor& OpenMS::BinnedSpectrumCompareFunctor::operator=(const OpenMS::BinnedSpectrumCompareFunctor&)' 73 | BinnedSpectrumCompareFunctor& operator=(const BinnedSpectrumCompareFunctor& source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 85%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusteringGrid.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusteringGrid.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusteringGrid.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusteringGrid.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/CLUSTERING/ClusteringGrid.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 85%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/CompleteLinkage.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/CompleteLinkage.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/CompleteLinkage.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/CompleteLinkage.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/CLUSTERING/CompleteLinkage.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 85%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/EuclideanSimilarity.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/EuclideanSimilarity.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/EuclideanSimilarity.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/EuclideanSimilarity.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/CLUSTERING/EuclideanSimilarity.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/GridBasedCluster.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/GridBasedCluster.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/GridBasedCluster.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/GridBasedCluster.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/CLUSTERING/GridBasedCluster.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/GridBasedClustering.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/GridBasedClustering.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/GridBasedClustering.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/GridBasedClustering.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/CLUSTERING/GridBasedClustering.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/SingleLinkage.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/SingleLinkage.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/SingleLinkage.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/SingleLinkage.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/CLUSTERING/SingleLinkage.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSharedPeakCount.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSharedPeakCount.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSharedPeakCount.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSharedPeakCount.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/SPECTRA/BinnedSharedPeakCount.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSharedPeakCount.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/SPECTRA/BinnedSharedPeakCount.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:73:35: note: by 'OpenMS::BinnedSpectrumCompareFunctor& OpenMS::BinnedSpectrumCompareFunctor::operator=(const OpenMS::BinnedSpectrumCompareFunctor&)' 73 | BinnedSpectrumCompareFunctor& operator=(const BinnedSpectrumCompareFunctor& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSharedPeakCount.h:75:28: note: by 'OpenMS::BinnedSharedPeakCount& OpenMS::BinnedSharedPeakCount::operator=(const OpenMS::BinnedSharedPeakCount&)' 75 | BinnedSharedPeakCount& operator=(const BinnedSharedPeakCount& source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:73:35: note: by 'OpenMS::BinnedSpectrumCompareFunctor& OpenMS::BinnedSpectrumCompareFunctor::operator=(const OpenMS::BinnedSpectrumCompareFunctor&)' 73 | BinnedSpectrumCompareFunctor& operator=(const BinnedSpectrumCompareFunctor& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.h:73:34: note: by 'OpenMS::BinnedSpectralContrastAngle& OpenMS::BinnedSpectralContrastAngle::operator=(const OpenMS::BinnedSpectralContrastAngle&)' 73 | BinnedSpectralContrastAngle& operator=(const BinnedSpectralContrastAngle& source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 85%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.h:52, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.h:140:40: note: by 'OpenMS::OptimizePeakDeconvolution& OpenMS::OptimizePeakDeconvolution::operator=(const OpenMS::OptimizePeakDeconvolution&)' 140 | inline OptimizePeakDeconvolution & operator=(const OptimizePeakDeconvolution & opt) | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.h:53: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.h:45: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.h:102:23: note: by 'OpenMS::TwoDOptimization& OpenMS::TwoDOptimization::operator=(const OpenMS::TwoDOptimization&)' 102 | TwoDOptimization& operator=(const TwoDOptimization& opt); | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSpectrum.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSpectrum.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSpectrum.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSpectrum.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/SPECTRA/BinnedSpectrum.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:73:35: note: by 'OpenMS::BinnedSpectrumCompareFunctor& OpenMS::BinnedSpectrumCompareFunctor::operator=(const OpenMS::BinnedSpectrumCompareFunctor&)' 73 | BinnedSpectrumCompareFunctor& operator=(const BinnedSpectrumCompareFunctor& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSharedPeakCount.h:75:28: note: by 'OpenMS::BinnedSharedPeakCount& OpenMS::BinnedSharedPeakCount::operator=(const OpenMS::BinnedSharedPeakCount&)' 75 | BinnedSharedPeakCount& operator=(const BinnedSharedPeakCount& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.h:73:34: note: by 'OpenMS::BinnedSpectralContrastAngle& OpenMS::BinnedSpectralContrastAngle::operator=(const OpenMS::BinnedSpectralContrastAngle&)' 73 | BinnedSpectralContrastAngle& operator=(const BinnedSpectralContrastAngle& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSumAgreeingIntensities.h:79:35: note: by 'OpenMS::BinnedSumAgreeingIntensities& OpenMS::BinnedSumAgreeingIntensities::operator=(const OpenMS::BinnedSumAgreeingIntensities&)' 79 | BinnedSumAgreeingIntensities& operator=(const BinnedSumAgreeingIntensities& source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSumAgreeingIntensities.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSumAgreeingIntensities.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSumAgreeingIntensities.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSumAgreeingIntensities.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/SPECTRA/BinnedSumAgreeingIntensities.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSumAgreeingIntensities.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/SPECTRA/BinnedSumAgreeingIntensities.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:73:35: note: by 'OpenMS::BinnedSpectrumCompareFunctor& OpenMS::BinnedSpectrumCompareFunctor::operator=(const OpenMS::BinnedSpectrumCompareFunctor&)' 73 | BinnedSpectrumCompareFunctor& operator=(const BinnedSpectrumCompareFunctor& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSumAgreeingIntensities.h:79:35: note: by 'OpenMS::BinnedSumAgreeingIntensities& OpenMS::BinnedSumAgreeingIntensities::operator=(const OpenMS::BinnedSumAgreeingIntensities&)' 79 | BinnedSumAgreeingIntensities& operator=(const BinnedSumAgreeingIntensities& source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/PeakAlignment.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/PeakAlignment.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/PeakAlignment.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/PeakAlignment.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/SPECTRA/PeakAlignment.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakAlignment.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/SPECTRA/PeakAlignment.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakAlignment.h:68:21: note: by 'OpenMS::PeakAlignment& OpenMS::PeakAlignment::operator=(const OpenMS::PeakAlignment&)' 68 | PeakAlignment & operator=(const PeakAlignment & source); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/SPECTRA/PeakAlignment.cpp:41: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectraSTSimilarityScore.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectraSTSimilarityScore.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectraSTSimilarityScore.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectraSTSimilarityScore.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/SPECTRA/SpectraSTSimilarityScore.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectraSTSimilarityScore.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/SPECTRA/SpectraSTSimilarityScore.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectraSTSimilarityScore.h:80:32: note: by 'OpenMS::SpectraSTSimilarityScore& OpenMS::SpectraSTSimilarityScore::operator=(const OpenMS::SpectraSTSimilarityScore&)' 80 | SpectraSTSimilarityScore & operator=(const SpectraSTSimilarityScore & source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumCheapDPCorr.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumCheapDPCorr.h:80:27: note: by 'OpenMS::SpectrumCheapDPCorr& OpenMS::SpectrumCheapDPCorr::operator=(const OpenMS::SpectrumCheapDPCorr&)' 80 | SpectrumCheapDPCorr & operator=(const SpectrumCheapDPCorr & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumPrecursorComparator.h:69:35: note: by 'OpenMS::SpectrumPrecursorComparator& OpenMS::SpectrumPrecursorComparator::operator=(const OpenMS::SpectrumPrecursorComparator&)' 69 | SpectrumPrecursorComparator & operator=(const SpectrumPrecursorComparator & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h:74:28: note: by 'OpenMS::ZhangSimilarityScore& OpenMS::ZhangSimilarityScore::operator=(const OpenMS::ZhangSimilarityScore&)' 74 | ZhangSimilarityScore & operator=(const ZhangSimilarityScore & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignmentScore.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.cpp:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h:84:25: note: by 'OpenMS::SpectrumAlignment& OpenMS::SpectrumAlignment::operator=(const OpenMS::SpectrumAlignment&)' 84 | SpectrumAlignment & operator=(const SpectrumAlignment & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignmentScore.h:88:30: note: by 'OpenMS::SpectrumAlignmentScore& OpenMS::SpectrumAlignmentScore::operator=(const OpenMS::SpectrumAlignmentScore&)' 88 | SpectrumAlignmentScore & operator=(const SpectrumAlignmentScore & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.cpp:41: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/SteinScottImproveScore.h:86:30: note: by 'OpenMS::SteinScottImproveScore& OpenMS::SteinScottImproveScore::operator=(const OpenMS::SteinScottImproveScore&)' 86 | SteinScottImproveScore & operator=(const SteinScottImproveScore & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.cpp:4make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' 2: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakAlignment.h:68:21: note: by 'OpenMS::PeakAlignment& OpenMS::PeakAlignment::operator=(const OpenMS::PeakAlignment&)' 68 | PeakAlignment & operator=(const PeakAlignment & source); | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumAlignment.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumAlignment.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumAlignment.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumAlignment.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/SPECTRA/SpectrumAlignment.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/SPECTRA/SpectrumAlignment.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h:84:25: note: by 'OpenMS::SpectrumAlignment& OpenMS::SpectrumAlignment::operator=(const OpenMS::SpectrumAlignment&)' 84 | SpectrumAlignment & operator=(const SpectrumAlignment & source); | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumAlignmentScore.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumAlignmentScore.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumAlignmentScore.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumAlignmentScore.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/SPECTRA/SpectrumAlignmentScore.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignmentScore.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/SPECTRA/SpectrumAlignmentScore.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h:84:25: note: by 'OpenMS::SpectrumAlignment& OpenMS::SpectrumAlignment::operator=(const OpenMS::SpectrumAlignment&)' 84 | SpectrumAlignment & operator=(const SpectrumAlignment & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignmentScore.h:42: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignmentScore.h:88:30: note: by 'OpenMS::SpectrumAlignmentScore& OpenMS::SpectrumAlignmentScore::operator=(const OpenMS::SpectrumAlignmentScore&)' 88 | SpectrumAlignmentScore & operator=(const SpectrumAlignmentScore & source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 89%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumPrecursorComparator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumPrecursorComparator.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumPrecursorComparator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumPrecursorComparator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/SPECTRA/SpectrumPrecursorComparator.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumPrecursorComparator.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/SPECTRA/SpectrumPrecursorComparator.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumPrecursorComparator.h:69:35: note: by 'OpenMS::SpectrumPrecursorComparator& OpenMS::SpectrumPrecursorComparator::operator=(const OpenMS::SpectrumPrecursorComparator&)' 69 | SpectrumPrecursorComparator & operator=(const SpectrumPrecursorComparator & source); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/SPECTRA/SpectrumPrecursorComparator.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 89%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumCheapDPCorr.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumCheapDPCorr.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumCheapDPCorr.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumCheapDPCorr.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/SPECTRA/SpectrumCheapDPCorr.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumCheapDPCorr.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/SPECTRA/SpectrumCheapDPCorr.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumCheapDPCorr.h:42: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumCheapDPCorr.h:80:27: note: by 'OpenMS::SpectrumCheapDPCorr& OpenMS::SpectrumCheapDPCorr::operator=(const OpenMS::SpectrumCheapDPCorr&)' 80 | SpectrumCheapDPCorr & operator=(const SpectrumCheapDPCorr & source); | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 89%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SteinScottImproveScore.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SteinScottImproveScore.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SteinScottImproveScore.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SteinScottImproveScore.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/SPECTRA/SteinScottImproveScore.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/SteinScottImproveScore.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/SPECTRA/SteinScottImproveScore.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/SteinScottImproveScore.h:86:30: note: by 'OpenMS::SteinScottImproveScore& OpenMS::SteinScottImproveScore::operator=(const OpenMS::SteinScottImproveScore&)' 86 | SteinScottImproveScore & operator=(const SteinScottImproveScore & source); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/SPECTRA/SteinScottImproveScore.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 89%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/ZhangSimilarityScore.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/ZhangSimilarityScore.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/ZhangSimilarityScore.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/ZhangSimilarityScore.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/SPECTRA/ZhangSimilarityScore.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/SPECTRA/ZhangSimilarityScore.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h:74:28: note: by 'OpenMS::ZhangSimilarityScore& OpenMS::ZhangSimilarityScore::operator=(const OpenMS::ZhangSimilarityScore&)' 74 | ZhangSimilarityScore & operator=(const ZhangSimilarityScore & source); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/SPECTRA/ZhangSimilarityScore.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 89%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/DetectabilitySimulation.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/DetectabilitySimulation.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/DetectabilitySimulation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/DetectabilitySimulation.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/DetectabilitySimulation.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/SimTypes.h:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/DetectabilitySimulation.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/DetectabilitySimulation.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/DetectabilitySimulation.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/DetectabilitySimulation.h:71:30: note: by 'OpenMS::DetectabilitySimulation& OpenMS::DetectabilitySimulation::operator=(const OpenMS::DetectabilitySimulation&)' 71 | DetectabilitySimulation& operator=(const DetectabilitySimulation& source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 89%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/EGHModel.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/EGHModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/EGHModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/EGHModel.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/EGHModel.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/EGHModel.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/EGHModel.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:26: note: by 'OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/EGHModel.h:72:24: note: by 'virtual OpenMS::EGHModel& OpenMS::EGHModel::operator=(const OpenMS::EGHModel&)' 72 | virtual EGHModel & operator=(const EGHModel & source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 89%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/DigestSimulation.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/DigestSimulation.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/DigestSimulation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/DigestSimulation.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/DigestSimulation.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/SimTypes.h:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/DigestSimulation.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/DigestSimulation.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/DigestSimulation.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/DigestSimulation.h:74:23: note: by 'OpenMS::DigestSimulation& OpenMS::DigestSimulation::operator=(const OpenMS::DigestSimulation&)' 74 | DigestSimulation& operator=(const DigestSimulation& source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 89%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/EGHFitter1D.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/EGHFitter1D.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/EGHFitter1D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/EGHFitter1D.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/EGHFitter1D.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/EGHFitter1D.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/EGHFitter1D.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:90:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 90 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:90:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:109:31: note: by 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' 109 | virtual LevMarqFitter1D & operator=(const LevMarqFitter1D & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:109:31: warning: 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/EGHFitter1D.h:62:27: note: by 'virtual OpenMS::EGHFitter1D& OpenMS::EGHFitter1D::operator=(const OpenMS::EGHFitter1D&)' 62 | virtual EGHFitter1D & operator=(const EGHFitter1D & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/EGHFitter1D.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:26: note: by 'OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 89%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/IonizationSimulation.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/IonizationSimulation.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/IonizationSimulation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/IonizationSimulation.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/IonizationSimulation.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/SimTypes.h:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/IonizationSimulation.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/IonizationSimulation.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/IonizationSimulation.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/IonizationSimulation.h:93:27: note: by 'OpenMS::IonizationSimulation& OpenMS::IonizationSimulation::operator=(const OpenMS::IonizationSimulation&)' 93 | IonizationSimulation& operator=(const IonizationSimulation& source); | ^~~~~~~~ In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/SimTypes.h:41: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 89%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/MSSim.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/MSSim.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/MSSim.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/MSSim.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/MSSim.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/SimTypes.h:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/MSSim.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/MSSim.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/MSSim.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/MSSim.h:68:23: note: by 'OpenMS::MSSim& OpenMS::MSSim::operator=(const OpenMS::MSSim&)' 68 | class OPENMS_DLLAPI MSSim : | ^~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/MSSim.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/DigestSimulation.h:74:23: note: by 'OpenMS::DigestSimulation& OpenMS::DigestSimulation::operator=(const OpenMS::DigestSimulation&)' 74 | DigestSimulation& operator=(const DigestSimulation& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/MSSim.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/DetectabilitySimulation.h:71:30: note: by 'OpenMS::DetectabilitySimulation& OpenMS::DetectabilitySimulation::operator=(const OpenMS::DetectabilitySimulation&)' 71 | DetectabilitySimulation& operator=(const DetectabilitySimulation& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/EGHModel.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/RawMSSignalSimulation.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/MSSim.cpp:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:26: note: by 'OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/EGHModel.h:72:24: note: by 'virtual OpenMS::EGHModel& OpenMS::EGHModel::operator=(const OpenMS::EGHModel&)' 72 | virtual EGHModel & operator=(const EGHModel & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ProductModel.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/RawMSSignalSimulation.h:43: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.h:78:28: note: by 'virtual OpenMS::IsotopeModel& OpenMS::IsotopeModel::operator=(const OpenMS::IsotopeModel&)' 78 | virtual IsotopeModel & operator=(const IsotopeModel & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<2>': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ProductModel.h:65:12: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operatormake[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' =(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 2]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 2]' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ProductModel.h:124:28: note: by 'virtual OpenMS::ProductModel<2>& OpenMS::ProductModel<2>::operator=(const OpenMS::ProductModel<2>&)' 124 | virtual ProductModel & operator=(const ProductModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/RawMSSignalSimulation.h:82:28: note: by 'OpenMS::RawMSSignalSimulation& OpenMS::RawMSSignalSimulation::operator=(const OpenMS::RawMSSignalSimulation&)' 82 | RawMSSignalSimulation& operator=(const RawMSSignalSimulation& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/MSSim.cpp:41: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/RawTandemMSSignalSimulation.h:75:34: note: by 'OpenMS::RawTandemMSSignalSimulation& OpenMS::RawTandemMSSignalSimulation::operator=(const OpenMS::RawTandemMSSignalSimulation&)' 75 | RawTandemMSSignalSimulation& operator=(const RawTandemMSSignalSimulation& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/MSSim.cpp:42: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/IonizationSimulation.h:93:27: note: by 'OpenMS::IonizationSimulation& OpenMS::IonizationSimulation::operator=(const OpenMS::IonizationSimulation&)' 93 | IonizationSimulation& operator=(const IonizationSimulation& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/MSSim.cpp:43: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/RTSimulation.h:78:19: note: by 'OpenMS::RTSimulation& OpenMS::RTSimulation::operator=(const OpenMS::RTSimulation&)' 78 | RTSimulation& operator=(const RTSimulation& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/MSSim.cpp:45: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:49:23: note: by 'OpenMS::BaseLabeler& OpenMS::BaseLabeler::operator=(const OpenMS::BaseLabeler&)' 49 | class OPENMS_DLLAPI BaseLabeler : | ^~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 89%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/RTSimulation.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/RTSimulation.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/RTSimulation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/RTSimulation.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/RTSimulation.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/SimTypes.h:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/RTSimulation.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/RTSimulation.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Map.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/RTSimulation.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/RTSimulation.h:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/RTSimulation.h:78:19: note: by 'OpenMS::RTSimulation& OpenMS::RTSimulation::operator=(const OpenMS::RTSimulation&)' 78 | RTSimulation& operator=(const RTSimulation& source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 89%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/RawMSSignalSimulation.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/RawMSSignalSimulation.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/RawMSSignalSimulation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/RawMSSignalSimulation.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/RawMSSignalSimulation.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/SimTypes.h:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/RawMSSignalSimulation.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/RawMSSignalSimulation.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/RawMSSignalSimulation.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/EGHModel.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/RawMSSignalSimulation.h:41: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:26: note: by 'OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/EGHModel.h:72:24: note: by 'virtual OpenMS::EGHModel& OpenMS::EGHModel::operator=(const OpenMS::EGHModel&)' 72 | virtual EGHModel & operator=(const EGHModel & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ProductModel.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/RawMSSignalSimulation.h:43: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.h:78:28: note: by 'virtual OpenMS::IsotopeModel& OpenMS::IsotopeModel::operator=(const OpenMS::IsotopeModel&)' 78 | virtual IsotopeModel & operator=(const IsotopeModel & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<2>': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ProductModel.h:65:12: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 2]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 2]' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ProductModel.h:124:28: note: by 'virtual OpenMS::ProductModel<2>& OpenMS::ProductModel<2>::operator=(const OpenMS::ProductModel<2>&)' 124 | virtual ProductModel & operator=(const ProductModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/RawMSSignalSimulation.h:82:28: note: by 'OpenMS::RawMSSignalSimulation& OpenMS::RawMSSignalSimulation::operator=(const OpenMS::RawMSSignalSimulation&)' 82 | RawMSSignalSimulation& operator=(const RawMSSignalSimulation& source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/RawTandemMSSignalSimulation.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/RawTandemMSSignalSimulation.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/RawTandemMSSignalSimulation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/RawTandemMSSignalSimulation.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/RawTandemMSSignalSimulation.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/SimTypes.h:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/RawTandemMSSignalSimulation.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/RawTandemMSSignalSimulation.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/RawTandemMSSignalSimulation.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/RawTandemMSSignalSimulation.h:75:34: note: by 'OpenMS::RawTandemMSSignalSimulation& OpenMS::RawTandemMSSignalSimulation::operator=(const OpenMS::RawTandemMSSignalSimulation&)' 75 | RawTandemMSSignalSimulation& operator=(const RawTandemMSSignalSimulation& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/RawTandemMSSignalSimulation.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/IDMapper.h:77:15: note: by 'OpenMS::IDMapper& OpenMS::IDMapper::operator=(const OpenMS::IDMapper&)' 77 | IDMapper& operator=(const IDMapper& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.h:42: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:55:23: note: by 'OpenMS::PSLPFormulation& OpenMS::PSLPFormulation::operator=(const OpenMS::PSLPFormulation&)' 55 | class OPENMS_DLLAPI PSLPFormulation : | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.h:61:23: note: by 'OpenMS::OfflinePrecursorIonSelection& OpenMS::OfflinePrecursorIonSelection::operator=(const OpenMS::OfflinePrecursorIonSelection&)' 61 | class OPENMS_DLLAPI OfflinePrecursorIonSelection : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGenerator.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/RawTandemMSSignalSimulation.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:87:35: note: by 'OpenMS::TheoreticalSpectrumGenerator& OpenMS::TheoreticalSpectrumGenerator::operator=(const OpenMS::TheoreticalSpectrumGenerator&)' 87 | TheoreticalSpectrumGenerator& operator=(const TheoreticalSpectrumGenerator& tsg); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGenerator.h:197:39: note: by 'OpenMS::SvmTheoreticalSpectrumGenerator& OpenMS::SvmTheoreticalSpectrumGenerator::operator=(const OpenMS::SvmTheoreticalSpectrumGenerator&)' 197 | SvmTheoreticalSpectrumGenerator & operator=(const SvmTheoreticalSpectrumGenerator & tsg); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/RawTandemMSSignalSimulation.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h:49: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:73:35: note: by 'OpenMS::BinnedSpectrumCompareFunctor& OpenMS::BinnedSpectrumCompareFunctor::operator=(const OpenMS::BinnedSpectrumCompareFunctor&)' 73 | BinnedSpectrumCompareFunctor& operator=(const BinnedSpectrumCompareFunctor& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:42: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h:84:25: note: by 'OpenMS::SpectrumAlignment& OpenMS::SpectrumAlignment::operator=(const OpenMS::SpectrumAlignment&)' 84 | SpectrumAlignment & operator=(const SpectrumAlignment & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:75:11: note: by 'OpenMS::SpectraMerger::SpectraDistance_::operator=' 75 | class SpectraDistance_ : | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:146:20: note: by 'OpenMS::SpectraMerger& OpenMS::SpectraMerger::operator=(const OpenMS::SpectraMerger&)' 146 | SpectraMerger& operator=(const SpectraMerger& source); | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/BaseLabeler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/BaseLabeler.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/BaseLabeler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/BaseLabeler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/LABELING/BaseLabeler.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/LABELING/BaseLabeler.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:49:23: note: by 'OpenMS::BaseLabeler& OpenMS::BaseLabeler::operator=(const OpenMS::BaseLabeler&)' 49 | class OPENMS_DLLAPI BaseLabeler : | ^~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler_impl.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/LABELING/BaseLabeler.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/LABELING/ITRAQLabeler.h:62:23: note: by 'OpenMS::ITRAQLabeler& OpenMS::ITRAQLabeler::operator=(const OpenMS::ITRAQLabeler&)' 62 | class OPENMS_DLLAPI ITRAQLabeler : | ^~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler_impl.h:41: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/LABELING/LabelFreeLabeler.h:45:23: note: by 'OpenMS::LabelFreeLabeler& OpenMS::LabelFreeLabeler::operator=(const OpenMS::LabelFreeLabeler&)' 45 | class OPENMS_DLLAPI LabelFreeLabeler : | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler_impl.h:42: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/LABELING/O18Labeler.h:49:23: note: by 'OpenMS::O18Labeler& OpenMS::O18Labeler::operator=(const OpenMS::O18Labeler&)' 49 | class OPENMS_DLLAPI O18Labeler : | ^~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler_impl.h:43: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/LABELING/SILACLabeler.h:50:23: note: by 'OpenMS::SILACLabeler& OpenMS::SILACLabeler::operator=(const OpenMS::SILACLabeler&)' 50 | class OPENMS_DLLAPI SILACLabeler : | ^~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler_impl.h:44: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/LABELING/ICPLLabeler.h:49:23: note: by 'OpenMS::ICPLLabeler& OpenMS::ICPLLabeler::operator=(const OpenMS::ICPLLabeler&)' 49 | class OPENMS_DLLAPI ICPLLabeler : | ^~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/ITRAQLabeler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/ITRAQLabeler.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/ITRAQLabeler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/ITRAQLabeler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/LABELING/ITRAQLabeler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/LABELING/ITRAQLabeler.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/LABELING/ITRAQLabeler.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Map.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqConstants.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/LABELING/ITRAQLabeler.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:49:23: note: by 'OpenMS::BaseLabeler& OpenMS::BaseLabeler::operator=(const OpenMS::BaseLabeler&)' 49 | class OPENMS_DLLAPI BaseLabeler : | ^~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/LABELING/ITRAQLabeler.h:62:23: note: by 'OpenMS::ITRAQLabeler& OpenMS::ITRAQLabeler::operator=(const OpenMS::ITRAQLabeler&)' 62 | class OPENMS_DLLAPI ITRAQLabeler : | ^~~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/LabelFreeLabeler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/LabelFreeLabeler.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/LabelFreeLabeler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/LabelFreeLabeler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/LABELING/LabelFreeLabeler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/LABELING/LabelFreeLabeler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/LABELING/LabelFreeLabeler.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:49:23: note: by 'OpenMS::BaseLabeler& OpenMS::BaseLabeler::operator=(const OpenMS::BaseLabeler&)' 49 | class OPENMS_DLLAPI BaseLabeler : | ^~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/LABELING/LabelFreeLabeler.h:45:23: note: by 'OpenMS::LabelFreeLabeler& OpenMS::LabelFreeLabeler::operator=(const OpenMS::LabelFreeLabeler&)' 45 | class OPENMS_DLLAPI LabelFreeLabeler : | ^~~~~~~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/O18Labeler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/O18Labeler.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/O18Labeler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/O18Labeler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/LABELING/O18Labeler.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/LABELING/O18Labeler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/LABELING/O18Labeler.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:49:23: note: by 'OpenMS::BaseLabeler& OpenMS::BaseLabeler::operator=(const OpenMS::BaseLabeler&)' 49 | class OPENMS_DLLAPI BaseLabeler : | ^~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/LABELING/O18Labeler.h:49:23: note: by 'OpenMS::O18Labeler& OpenMS::O18Labeler::operator=(const OpenMS::O18Labeler&)' 49 | class OPENMS_DLLAPI O18Labeler : | ^~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/SILACLabeler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/SILACLabeler.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/SILACLabeler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/SILACLabeler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/LABELING/SILACLabeler.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/LABELING/SILACLabeler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/LABELING/SILACLabeler.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:49:23: note: by 'OpenMS::BaseLabeler& OpenMS::BaseLabeler::operator=(const OpenMS::BaseLabeler&)' 49 | class OPENMS_DLLAPI BaseLabeler : | ^~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/LABELING/SILACLabeler.h:50:23: note: by 'OpenMS::SILACLabeler& OpenMS::SILACLabeler::operator=(const OpenMS::SILACLabeler&)' 50 | class OPENMS_DLLAPI SILACLabeler : | ^~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/ICPLLabeler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/ICPLLabeler.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/ICPLLabeler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/ICPLLabeler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/LABELING/ICPLLabeler.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/LABELING/ICPLLabeler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/LABELING/ICPLLabeler.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:49:23: note: by 'OpenMS::BaseLabeler& OpenMS::BaseLabeler::operator=(const OpenMS::BaseLabeler&)' 49 | class OPENMS_DLLAPI BaseLabeler : | ^~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/LABELING/ICPLLabeler.h:49:23: note: by 'OpenMS::ICPLLabeler& OpenMS::ICPLLabeler::operator=(const OpenMS::ICPLLabeler&)' 49 | class OPENMS_DLLAPI ICPLLabeler : | ^~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/Contaminants.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/Contaminants.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/Contaminants.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/Contaminants.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/Contaminants.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/Contaminants.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/Contaminants.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/QCBase.h:132:20: warning: identifier 'requires' is a keyword in C++20 [-Wc++20-compat] 132 | virtual Status requires() const = 0; | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/Contaminants.h:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Feature.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/FeatureSummary.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/FeatureSummary.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/FeatureSummary.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/FeatureSummary.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/FeatureSummary.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/FeatureSummary.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/FeatureSummary.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/QCBase.h:132:20: warning: identifier 'requires' is a keyword in C++20 [-Wc++20-compat] 132 | virtual Status requires() const = 0; | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/FeatureSummary.h:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/FlagSet.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/QCBase.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/FragmentMassError.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/FragmentMassError.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/FragmentMassError.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/FragmentMassError.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/FragmentMassError.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/FragmentMassError.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/FragmentMassError.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/QCBase.h:132:20: warning: identifier 'requires' is a keyword in C++20 [-Wc++20-compat] 132 | virtual Status requires() const = 0; | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/FragmentMassError.cpp:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:87:35: note: by 'OpenMS::TheoreticalSpectrumGenerator& OpenMS::TheoreticalSpectrumGenerator::operator=(const OpenMS::TheoreticalSpectrumGenerator&)' 87 | TheoreticalSpectrumGenerator& operator=(const TheoreticalSpectrumGenerator& tsg); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/WindowMower.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/FragmentMassError.cpp:45: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ProteinHit.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ProteinIdentification.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/FragmentMassError.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/WindowMower.h:69:18: note: by 'OpenMS::WindowMower& OpenMS::WindowMower::operator=(const OpenMS::WindowMower&)' 69 | WindowMower& operator=(const WindowMower& source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/IdentificationSummary.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/IdentificationSummary.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/IdentificationSummary.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/IdentificationSummary.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/IdentificationSummary.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/IdentificationSummary.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/IdentificationSummary.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/QCBase.h:132:20: warning: identifier 'requires' is a keyword in C++20 [-Wc++20-compat] 132 | virtual Status requires() const = 0; | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/FWHM.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/FWHM.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/FWHM.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/FWHM.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/FWHM.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/FWHM.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/FWHM.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/QCBase.h:132:20: warning: identifier 'requires' is a keyword in C++20 [-Wc++20-compat] 132 | virtual Status requires() const = 0; | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/FWHM.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/FlagSet.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/QCBase.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/MissedCleavages.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/MissedCleavages.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/MissedCleavages.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/MissedCleavages.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/MissedCleavages.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/MissedCleavages.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/MissedCleavages.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/QCBase.h:132:20: warning: identifier 'requires' is a keyword in C++20 [-Wc++20-compat] 132 | virtual Status requires() const = 0; | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/MissedCleavages.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/FlagSet.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/QCBase.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 92%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/MQEvidenceExporter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/MQEvidenceExporter.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/MQEvidenceExporter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/MQEvidenceExporter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/MQEvidenceExporter.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/MQEvidenceExporter.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/MQEvidenceExporter.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /usr/include/c++/13/bits/locale_classes.h:40, from /usr/include/c++/13/bits/ios_base.h:41, from /usr/include/c++/13/ios:44, from /usr/include/c++/13/istream:40, from /usr/include/c++/13/fstream:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/MQEvidenceExporter.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 92%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/Ms2IdentificationRate.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/Ms2IdentificationRate.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/Ms2IdentificationRate.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/Ms2IdentificationRate.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/Ms2IdentificationRate.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/Ms2IdentificationRate.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/Ms2IdentificationRate.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/QCBase.h:132:20: warning: identifier 'requires' is a keyword in C++20 [-Wc++20-compat] 132 | virtual Status requires() const = 0; | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/Ms2IdentificationRate.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/FlagSet.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/QCBase.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 92%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/Ms2SpectrumStats.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/Ms2SpectrumStats.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/Ms2SpectrumStats.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/Ms2SpectrumStats.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/Ms2SpectrumStats.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/Ms2SpectrumStats.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/Ms2SpectrumStats.cpp:34: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/QCBase.h:132:20: warning: identifier 'requires' is a keyword in C++20 [-Wc++20-compat] 132 | virtual Status requires() const = 0; | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/Ms2SpectrumStats.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/FlagSet.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/QCBase.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 92%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/MzCalibration.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/MzCalibration.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/MzCalibration.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/MzCalibration.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/MzCalibration.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/MzCalibration.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/MzCalibration.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/QCBase.h:132:20: warning: identifier 'requires' is a keyword in C++20 [-Wc++20-compat] 132 | virtual Status requires() const = 0; | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/MzCalibration.cpp:41: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/FlagSet.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/QCBase.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 92%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/PeptideMass.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/PeptideMass.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/PeptideMass.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/PeptideMass.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/PeptideMass.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/PeptideMass.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/PeptideMass.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/QCBase.h:132:20: warning: identifier 'requires' is a keyword in C++20 [-Wc++20-compat] 132 | virtual Status requires() const = 0; | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/PeptideMass.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/FlagSet.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/QCBase.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 92%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/PSMExplainedIonCurrent.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/PSMExplainedIonCurrent.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/PSMExplainedIonCurrent.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/PSMExplainedIonCurrent.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/PSMExplainedIonCurrent.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/PSMExplainedIonCurrent.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/PSMExplainedIonCurrent.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/QCBase.h:132:20: warning: identifier 'requires' is a keyword in C++20 [-Wc++20-compat] 132 | virtual Status requires() const = 0; | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/PSMExplainedIonCurrent.cpp:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:87:35: note: by 'OpenMS::TheoreticalSpectrumGenerator& OpenMS::TheoreticalSpectrumGenerator::operator=(const OpenMS::TheoreticalSpectrumGenerator&)' 87 | TheoreticalSpectrumGenerator& operator=(const TheoreticalSpectrumGenerator& tsg); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/WindowMower.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/PSMExplainedIonCurrent.cpp:43: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ProteinHit.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ProteinIdentification.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/PSMExplainedIonCurrent.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/WindowMower.h:69:18: note: by 'OpenMS::WindowMower& OpenMS::WindowMower::operator=(const OpenMS::WindowMower&)' 69 | WindowMower& operator=(const WindowMower& source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 92%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/QCBase.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/QCBase.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/QCBase.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/QCBase.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/QCBase.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/QCBase.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/QCBase.h:132:20: warning: identifier 'requires' is a keyword in C++20 [-Wc++20-compat] 132 | virtual Status requires() const = 0; | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/QCBase.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/FlagSet.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/QCBase.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 92%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/SpectrumCount.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/SpectrumCount.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/SpectrumCount.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/SpectrumCount.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/SpectrumCount.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/SpectrumCount.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/SpectrumCount.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/QCBase.h:132:20: warning: identifier 'requires' is a keyword in C++20 [-Wc++20-compat] 132 | virtual Status requires() const = 0; | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/SpectrumCount.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/FlagSet.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/QCBase.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 92%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/RTAlignment.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/RTAlignment.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/RTAlignment.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/RTAlignment.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/RTAlignment.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/RTAlignment.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/RTAlignment.cpp:34: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/QCBase.h:132:20: warning: identifier 'requires' is a keyword in C++20 [-Wc++20-compat] 132 | virtual Status requires() const = 0; | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/RTAlignment.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/FlagSet.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/QCBase.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 92%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/TIC.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/TIC.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/TIC.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/TIC.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/TIC.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/TIC.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/TIC.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/QCBase.h:132:20: warning: identifier 'requires' is a keyword in C++20 [-Wc++20-compat] 132 | virtual Status requires() const = 0; | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/TIC.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/FlagSet.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/QCBase.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:61:23: note: by 'OpenMS::LinearResampler& OpenMS::LinearResampler::operator=(const OpenMS::LinearResampler&)' 61 | class OPENMS_DLLAPI LinearResampler : | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h:57:23: note: by 'OpenMS::LinearResamplerAlign::operator=' 57 | class OPENMS_DLLAPI LinearResamplerAlign : | ^~~~~~~~~~~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 92%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/ChromatogramExtractor.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/ChromatogramExtractor.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/ChromatogramExtractor.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/ChromatogramExtractor.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/ChromatogramExtractor.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ChromatogramExtractor.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/ChromatogramExtractor.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ChromatogramExtractorAlgorithm.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ChromatogramExtractor.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h:46, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathHelper.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ChromatogramExtractor.h:44: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:159:17: note: by 'OpenMS::DIAScoring& OpenMS::DIAScoring::operator=(const OpenMS::DIAScoring&)' 159 | DIAScoring& operator=(const DIAScoring& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:43: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h:83:19: note: by 'OpenMS::SONARScoring& OpenMS::SONARScoring::operator=(const OpenMS::SONARScoring&)' 83 | SONARScoring& operator=(const SONARScoring& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:44: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:90:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 90 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:90:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:109:31: note: by 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' 109 | virtual LevMarqFitter1D & operator=(const LevMarqFitter1D & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:109:31: warning: 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:62:26: note: by 'virtual OpenMS::EmgFitter1D& OpenMS::EmgFitter1D::operator=(const OpenMS::EmgFitter1D&)' 62 | virtual EmgFitter1D& operator=(const EmgFitter1D& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:26: note: by 'OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:68:16: note: by 'OpenMS::EmgModel& OpenMS::EmgModel::operator=(const OpenMS::EmgModel&)' 68 | EmgModel & operator=(const EmgModel & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:70:23: note: by 'OpenMS::GaussFilter& OpenMS::GaussFilter::operator=(const OpenMS::GaussFilter&)' 70 | class OPENMS_DLLAPI GaussFilter : | ^~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:89:23: note: by 'OpenMS::MRMFeatureFinderScoring& OpenMS::MRMFeatureFinderScoring::operator=(const OpenMS::MRMFeatureFinderScoring&)' 89 | class OPENMS_DLLAPI MRMFeatureFinderScoring : | ^~~~~~~~~~~~~~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 92%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/DBSuitability.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/DBSuitability.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/DBSuitability.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/DBSuitability.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/DBSuitability.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/FalseDiscoveryRate.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/DBSuitability.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/FalseDiscoveryRate.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/FalseDiscoveryRate.h:236:25: note: by 'OpenMS::FalseDiscoveryRate& OpenMS::FalseDiscoveryRate::operator=(const OpenMS::FalseDiscoveryRate&)' 236 | FalseDiscoveryRate& operator=(const FalseDiscoveryRate&); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/DBSuitability.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/PeptideIndexing.h:113:22: note: by 'OpenMS::PeptideIndexing& OpenMS::PeptideIndexing::operator=(const OpenMS::PeptideIndexing&)' 113 | class OPENMS_DLLAPI PeptideIndexing : | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/DBSuitability.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMDecoy.h:81:23: note: by 'OpenMS::MRMDecoy::operator=' 81 | class OPENMS_DLLAPI MRMDecoy : | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/DBSuitability.cpp:48: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/DBSuitability.h:70:23: note: by 'OpenMS::DBSuitability& OpenMS::DBSuitability::operator=(const OpenMS::DBSuitability&)' 70 | class OPENMS_DLLAPI DBSuitability: | ^~~~~~~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/DBSuitability.cpp:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::FilterPeptideEvidences(EvidenceFilter&, std::vector&) [with EvidenceFilter = DigestionFilter]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:486:68: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:728:35: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::DigestionFilter]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 728 | std::not1(filter)); | ~~~~~~~~~^~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1138:24: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1147:26: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openmake[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' ms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMetaValue]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:572:26: required from 'static void OpenMS::IDFilter::keepMatchingItemsUnroll(IDContainer&, const Predicate&) [with IDContainer = std::vector; Predicate = HasMetaValue]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1210:30: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMetaValue]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1358:31: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1368:35: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 92%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/ChromatogramExtractorAlgorithm.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/ChromatogramExtractorAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/ChromatogramExtractorAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/ChromatogramExtractorAlgorithm.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/ChromatogramExtractorAlgorithm.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAHelper.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAHelper.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAHelper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAHelper.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/DIAHelper.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/DIAHelper.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:87:35: note: by 'OpenMS::TheoreticalSpectrumGenerator& OpenMS::TheoreticalSpectrumGenerator::operator=(const OpenMS::TheoreticalSpectrumGenerator&)' 87 | TheoreticalSpectrumGenerator& operator=(const TheoreticalSpectrumGenerator& tsg); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/DIAHelper.cpp:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63, from /usr/include/c++/13/map:62, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/AASequence.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAHelper.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/DIAHelper.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:150:29: note: by 'OpenMS::FeatureFinderAlgorithm& OpenMS::FeatureFinderAlgorithm::operator=(const OpenMS::FeatureFinderAlgorithm&)' 150 | FeatureFinderAlgorithm& operator=(const FeatureFinderAlgorithm&); | ^~~~~~~~ In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, from /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAHelper.h:38: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/ConfidenceScoring.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/ConfidenceScoring.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/ConfidenceScoring.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/ConfidenceScoring.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/ConfidenceScoring.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ConfidenceScoring.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/ConfidenceScoring.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/specfun.h:43, from /usr/include/c++/13/cmath:3699, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ConfidenceScoring.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAPrescoring.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAPrescoring.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAPrescoring.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAPrescoring.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/DIAPrescoring.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAPrescoring.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/DIAPrescoring.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAPrescoring.h:59:23: note: by 'OpenMS::DiaPrescore::operator=' 59 | class OPENMS_DLLAPI DiaPrescore : | ^~~~~~~~~~~ In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, from /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAPrescoring.h:38: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/IonMobilityScoring.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/IonMobilityScoring.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/IonMobilityScoring.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/IonMobilityScoring.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/IonMobilityScoring.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h:46, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/IonMobilityScoring.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/IonMobilityScoring.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:159:17: note: by 'OpenMS::DIAScoring& OpenMS::DIAScoring::operator=(const OpenMS::DIAScoring&)' 159 | DIAScoring& operator=(const DIAScoring& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/IonMobilityScoring.cpp:43: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h:83:19: note: by 'OpenMS::SONARScoring& OpenMS::SONARScoring::operator=(const OpenMS::SONARScoring&)' 83 | SONARScoring& operator=(const SONARScoring& rhs); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAScoring.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAScoring.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAScoring.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAScoring.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/DIAScoring.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/DIAScoring.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:159:17: note: by 'OpenMS::DIAScoring& OpenMS::DIAScoring::operator=(const OpenMS::DIAScoring&)' 159 | DIAScoring& operator=(const DIAScoring& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/DIAScoring.cpp:41: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63, from /usr/include/c++/13/map:62, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/AASequence.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:150:29: note: by 'OpenMS::FeatureFinderAlgorithm& OpenMS::FeatureFinderAlgorithm::operator=(const OpenMS::FeatureFinderAlgorithm&)' 150 | FeatureFinderAlgorithm& operator=(const FeatureFinderAlgorithm&); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/DIAScoring.cpp:46: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAPrescoring.h:59:23: note: by 'OpenMS::DiaPrescore::operator=' 59 | class OPENMS_DLLAPI DiaPrescore : | ^~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/DIAScoring.cpp:48: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:87:35: note: by 'OpenMS::TheoreticalSpectrumGenerator& OpenMS::TheoreticalSpectrumGenerator::operator=(const OpenMS::TheoreticalSpectrumGenerator&)' 87 | TheoreticalSpectrumGenerator& operator=(const TheoreticalSpectrumGenerator& tsg); | ^~~~~~~~ In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, from /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:40: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MasstraceCorrelator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MasstraceCorrelator.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MasstraceCorrelator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MasstraceCorrelator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/MasstraceCorrelator.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MasstraceCorrelator.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/MasstraceCorrelator.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MasstraceCorrelator.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MasstraceCorrelator.h:53:23: note: by 'OpenMS::MasstraceCorrelator& OpenMS::MasstraceCorrelator::operator=(const OpenMS::MasstraceCorrelator&)' 53 | class OPENMS_DLLAPI MasstraceCorrelator : | ^~~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMAssay.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMAssay.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMAssay.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMAssay.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/MRMAssay.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMDecoy.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMDecoy.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMDecoy.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMDecoy.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/MRMDecoy.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMDecoy.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/MRMDecoy.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMDecoy.h:81:23: note: by 'OpenMS::MRMDecoy::operator=' 81 | class OPENMS_DLLAPI MRMDecoy : | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureQC.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFilter.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Feature.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MRMFeature.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureQC.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFilter.h:44: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFilter.h:59:23: note: by 'OpenMS::MRMFeatureFilter& OpenMS::MRMFeatureFilter::operator=(const OpenMS::MRMFeatureFilter&)' 59 | class OPENMS_DLLAPI MRMFeatureFilter : | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp: In member function 'void OpenMS::MRMFeatureFilter::FilterFeatureMap(OpenMS::FeatureMap&, const OpenMS::MRMFeatureQC&, const OpenMS::TargetedExperiment&)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp:205:70: warning: loop variable 'kv' of type 'const std::pair >&' binds to a temporary constructed from type 'const std::pair >' [-Wrange-loop-construct] 205 | for (const std::pair>& kv : filter_criteria.component_group_qcs.at(cg_qc_it).meta_value_qc) | ^~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp:205:70: note: use non-reference type 'const std::pair >' to make the copy explicit or 'const std::pair >&' to prevent copying /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp: In member function 'void OpenMS::MRMFeatureFilter::FilterFeatureMapPercRSD(OpenMS::FeatureMap&, const OpenMS::MRMFeatureQC&, const OpenMS::MRMFeatureQC&)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp:399:70: warning: loop variable 'kv' of type 'const std::pair >&' binds to a temporary constructed from type 'const std::pair >' [-Wrange-loop-construct] 399 | for (const std::pair>& kv : filter_criteria.component_group_qcs.at(cg_qc_it).meta_value_qc) | ^~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp:399:70: note: use non-reference type 'const std::pair >' to make the copy explicit or 'const std::pair >&' to prevent copying make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeaturePicker.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeaturePicker.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeaturePicker.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeaturePicker.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/MRMFeaturePicker.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureQC.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureQC.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureQC.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureQC.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureQC.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureQC.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureQC.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Feature.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MRMFeature.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureQC.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h:46, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:159:17: note: by 'OpenMS::DIAScoring& OpenMS::DIAScoring::operator=(const OpenMS::DIAScoring&)' 159 | DIAScoring& operator=(const DIAScoring& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:43: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h:83:19: note: by 'OpenMS::SONARScoring& OpenMS::SONARScoring::operator=(const OpenMS::SONARScoring&)' 83 | SONARScoring& operator=(const SONARScoring& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:44: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:90:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 90 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:90:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:109:31: note: by 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' 109 | virtual LevMarqFitter1D & operator=(const LevMarqFitter1D & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:109:31: warning: 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:62:26: note: by 'virtual OpenMS::EmgFitter1D& OpenMS::EmgFitter1D::operator=(const OpenMS::EmgFitter1D&)' 62 | virtual EmgFitter1D& operator=(const EmgFitter1D& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:26: note: by 'OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:68:16: note: by 'OpenMS::EmgModel& OpenMS::EmgModel::operator=(const OpenMS::EmgModel&)' 68 | EmgModel & operator=(const EmgModel & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:70:23: note: by 'OpenMS::GaussFilter& OpenMS::GaussFilter::operator=(const OpenMS::GaussFilter&)' 70 | class OPENMS_DLLAPI GaussFilter : | ^~~~~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:49: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:89:23: note: by 'OpenMS::MRMFeatureFinderScoring& OpenMS::MRMFeatureFinderScoring::operator=(const OpenMS::MRMFeatureFinderScoring&)' 89 | class OPENMS_DLLAPI MRMFeatureFinderScoring : | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.cpp:44: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/MATH/MISC/EmgGradientDescent.h:64:23: note: by 'OpenMS::EmgGradientDescent& OpenMS::EmgGradientDescent::operator=(const OpenMS::EmgGradientDescent&)' 64 | class OPENMS_DLLAPI EmgGradientDescent : | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h:72:23: note: by 'OpenMS::PeakIntegrator& OpenMS::PeakIntegrator::operator=(const OpenMS::PeakIntegrator&)' 72 | class OPENMS_DLLAPI PeakIntegrator : | ^~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h:44: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:101:23: note: by 'OpenMS::SavitzkyGolayFilter& OpenMS::SavitzkyGolayFilter::operator=(const OpenMS::SavitzkyGolayFilter&)' 101 | class OPENMS_DLLAPI SavitzkyGolayFilter : | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:47: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h: In instantiation of 'class OpenMS::SignalToNoiseEstimator': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:81:9: required from 'class OpenMS::SignalToNoiseEstimatorMedian' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:174:51: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.cpp:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:86:37: note: by 'OpenMS::SignalToNoiseEstimator& OpenMS::SignalToNoiseEstimator::operator=(const OpenMS::SignalToNoiseEstimator&) [with Container = OpenMS::MSChromatogram]' 86 | inline SignalToNoiseEstimator & operator=(const SignalToNoiseEstimator & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h: In instantiation of 'class OpenMS::SignalToNoiseEstimatorMedian': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:174:51: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:153:43: note: by 'OpenMS::SignalToNoiseEstimatorMedian& OpenMS::SignalToNoiseEstimatorMedian::operator=(const OpenMS::SignalToNoiseEstimatorMedimake[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' an&) [with Container = OpenMS::MSChromatogram]' 153 | inline SignalToNoiseEstimatorMedian & operator=(const SignalToNoiseEstimatorMedian & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:136:20: note: by 'OpenMS::PeakPickerMRM& OpenMS::PeakPickerMRM::operator=(const OpenMS::PeakPickerMRM&)' 136 | PeakPickerMRM& operator=(const PeakPickerMRM& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h:45: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:61:23: note: by 'OpenMS::LinearResampler& OpenMS::LinearResampler::operator=(const OpenMS::LinearResampler&)' 61 | class OPENMS_DLLAPI LinearResampler : | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h:57:23: note: by 'OpenMS::LinearResamplerAlign::operator=' 57 | class OPENMS_DLLAPI LinearResamplerAlign : | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h:784:31: note: by 'OpenMS::MRMTransitionGroupPicker& OpenMS::MRMTransitionGroupPicker::operator=(const OpenMS::MRMTransitionGroupPicker&)' 784 | MRMTransitionGroupPicker& operator=(const MRMTransitionGroupPicker& rhs); | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMBatchFeatureSelector.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMBatchFeatureSelector.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMBatchFeatureSelector.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMBatchFeatureSelector.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/MRMBatchFeatureSelector.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureSelector.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMBatchFeatureSelector.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/MRMBatchFeatureSelector.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/LPWrapper.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureSelector.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 96%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMIonSeries.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMIonSeries.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMIonSeries.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMIonSeries.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/MRMIonSeries.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 96%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMRTNormalizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMRTNormalizer.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMRTNormalizer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMRTNormalizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/MRMRTNormalizer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 96%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureSelector.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureSelector.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureSelector.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureSelector.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureSelector.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureSelector.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureSelector.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/LPWrapper.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureSelector.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 96%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMScoring.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMScoring.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMScoring.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMScoring.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/MRMScoring.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 96%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h:44: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/MATH/MISC/EmgGradientDescent.h:64:23: note: by 'OpenMS::EmgGradientDescent& OpenMS::EmgGradientDescent::operator=(const OpenMS::EmgGradientDescent&)' 64 | class OPENMS_DLLAPI EmgGradientDescent : | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h:72:23: note: by 'OpenMS::PeakIntegrator& OpenMS::PeakIntegrator::operator=(const OpenMS::PeakIntegrator&)' 72 | class OPENMS_DLLAPI PeakIntegrator : | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h:44: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MRMTransitionGroup.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:101:23: note: by 'OpenMS::SavitzkyGolayFilter& OpenMS::SavitzkyGolayFilter::operator=(const OpenMS::SavitzkyGolayFilter&)' 101 | class OPENMS_DLLAPI SavitzkyGolayFilter : | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:45: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:70:23: note: by 'OpenMS::GaussFilter& OpenMS::GaussFilter::operator=(const OpenMS::GaussFilter&)' 70 | class OPENMS_DLLAPI GaussFilter : | ^~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:47: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h: In instantiation of 'class OpenMS::SignalToNoiseEstimator': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:81:9: required from 'class OpenMS::SignalToNoiseEstimatorMedian' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:174:51: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:43: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:86:37: note: by 'OpenMS::SignalToNoiseEstimator& OpenMS::SignalToNoiseEstimator::operator=(const OpenMS::SignalToNoiseEstimator&) [with Container = OpenMS::MSChromatogram]' 86 | inline SignalToNoiseEstimator & operator=(const SignalToNoiseEstimator & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h: In instantiation of 'class OpenMS::SignalToNoiseEstimatorMedian': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:174:51: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& opmake[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' erator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:153:43: note: by 'OpenMS::SignalToNoiseEstimatorMedian& OpenMS::SignalToNoiseEstimatorMedian::operator=(const OpenMS::SignalToNoiseEstimatorMedian&) [with Container = OpenMS::MSChromatogram]' 153 | inline SignalToNoiseEstimatorMedian & operator=(const SignalToNoiseEstimatorMedian & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:136:20: note: by 'OpenMS::PeakPickerMRM& OpenMS::PeakPickerMRM::operator=(const OpenMS::PeakPickerMRM&)' 136 | PeakPickerMRM& operator=(const PeakPickerMRM& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h:45: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:61:23: note: by 'OpenMS::LinearResampler& OpenMS::LinearResampler::operator=(const OpenMS::LinearResampler&)' 61 | class OPENMS_DLLAPI LinearResampler : | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h:57:23: note: by 'OpenMS::LinearResamplerAlign::operator=' 57 | class OPENMS_DLLAPI LinearResamplerAlign : | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h:784:31: note: by 'OpenMS::MRMTransitionGroupPicker& OpenMS::MRMTransitionGroupPicker::operator=(const OpenMS::MRMTransitionGroupPicker&)' 784 | MRMTransitionGroupPicker& operator=(const MRMTransitionGroupPicker& rhs); | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 96%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathScores.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathScores.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathScores.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathScores.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathScores.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 96%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathHelper.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathHelper.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathHelper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathHelper.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathHelper.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathHelper.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathHelper.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h:46, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathHelper.h:41: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:159:17: note: by 'OpenMS::DIAScoring& OpenMS::DIAScoring::operator=(const OpenMS::DIAScoring&)' 159 | DIAScoring& operator=(const DIAScoring& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:43: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h:83:19: note: by 'OpenMS::SONARScoring& OpenMS::SONARScoring::operator=(const OpenMS::SONARScoring&)' 83 | SONARScoring& operator=(const SONARScoring& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:44: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:90:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 90 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:90:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:109:31: note: by 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' 109 | virtual LevMarqFitter1D & operator=(const LevMarqFitter1D & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:109:31: warning: 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:62:26: note: by 'virtual OpenMS::EmgFitter1D& OpenMS::EmgFitter1D::operator=(const OpenMS::EmgFitter1D&)' 62 | virtual EmgFitter1D& operator=(const EmgFitter1D& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:26: note: by 'OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:68:16: note: by 'Omake[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' penMS::EmgModel& OpenMS::EmgModel::operator=(const OpenMS::EmgModel&)' 68 | EmgModel & operator=(const EmgModel & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:70:23: note: by 'OpenMS::GaussFilter& OpenMS::GaussFilter::operator=(const OpenMS::GaussFilter&)' 70 | class OPENMS_DLLAPI GaussFilter : | ^~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:89:23: note: by 'OpenMS::MRMFeatureFinderScoring& OpenMS::MRMFeatureFinderScoring::operator=(const OpenMS::MRMFeatureFinderScoring&)' 89 | class OPENMS_DLLAPI MRMFeatureFinderScoring : | ^~~~~~~~~~~~~~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 96%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathScoring.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathScoring.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathScoring.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathScoring.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathScoring.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h:46, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathScoring.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:159:17: note: by 'OpenMS::DIAScoring& OpenMS::DIAScoring::operator=(const OpenMS::DIAScoring&)' 159 | DIAScoring& operator=(const DIAScoring& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathScoring.cpp:42: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h:83:19: note: by 'OpenMS::SONARScoring& OpenMS::SONARScoring::operator=(const OpenMS::SONARScoring&)' 83 | SONARScoring& operator=(const SONARScoring& rhs); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 96%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathTSVWriter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathTSVWriter.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathTSVWriter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathTSVWriter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathTSVWriter.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathTSVWriter.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathTSVWriter.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/TransitionExperiment.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathTSVWriter.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 96%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathOSWWriter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathOSWWriter.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathOSWWriter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathOSWWriter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathOSWWriter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathOSWWriter.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathOSWWriter.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/TransitionExperiment.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathOSWWriter.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 96%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/PeakIntegrator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/PeakIntegrator.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/PeakIntegrator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/PeakIntegrator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/PeakIntegrator.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/PeakIntegrator.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h:44: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/MATH/MISC/EmgGradientDescent.h:64:23: note: by 'OpenMS::EmgGradientDescent& OpenMS::EmgGradientDescent::operator=(const OpenMS::EmgGradientDescent&)' 64 | class OPENMS_DLLAPI EmgGradientDescent : | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h:72:23: note: by 'OpenMS::PeakIntegrator& OpenMS::PeakIntegrator::operator=(const OpenMS::PeakIntegrator&)' 72 | class OPENMS_DLLAPI PeakIntegrator : | ^~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/PeakPickerMRM.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/PeakPickerMRM.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/PeakPickerMRM.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/PeakPickerMRM.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/PeakPickerMRM.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/PeakPickerMRM.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:101:23: note: by 'OpenMS::SavitzkyGolayFilter& OpenMS::SavitzkyGolayFilter::operator=(const OpenMS::SavitzkyGolayFilter&)' 101 | class OPENMS_DLLAPI SavitzkyGolayFilter : | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:45: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:70:23: note: by 'OpenMS::GaussFilter& OpenMS::GaussFilter::operator=(const OpenMS::GaussFilter&)' 70 | class OPENMS_DLLAPI GaussFilter : | ^~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:47: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h: In instantiation of 'class OpenMS::SignalToNoiseEstimator': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:81:9: required from 'class OpenMS::SignalToNoiseEstimatorMedian' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:174:51: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:43: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:86:37: note: by 'OpenMS::SignalToNoiseEstimator& OpenMS::SignalToNoiseEstimator::operator=(const OpenMS::SignalToNoiseEstimator&) [with Container = OpenMS::MSChromatogram]' 86 | inline SignalToNoiseEstimator & operator=(const SignalToNoiseEstimator & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h: In instantiation of 'class OpenMS::SignalToNoiseEstimatorMedian': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:174:51: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:153:43: note: by 'OpenMS::SignalToNoiseEstimatorMedian& OpenMS::SignalToNoiseEstimatorMedian::operator=(const OpenMS::SignalToNoiseEstimatorMedian&) [with Container = OpenMS::MSChromatogram]' 153 | inline SignalToNoiseEstimatorMedian & operator=(const SignalToNoiseEstimatorMedian & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:136:20: note: by 'OpenMS::PeakPickerMRM& OpenMS::PeakPickerMRM::operator=(const OpenMS::PeakPickerMRM&)' 136 | PeakPickerMRM& operator=(const PeakPickerMRM& rhs); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SONARScoring.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SONARScoring.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SONARScoring.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SONARScoring.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/SONARScoring.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/SONARScoring.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h:46, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h:44: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:159:17: note: by 'OpenMS::DIAScoring& OpenMS::DIAScoring::operator=(const OpenMS::DIAScoring&)' 159 | DIAScoring& operator=(const DIAScoring& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h:83:19: note: by 'OpenMS::SONARScoring& OpenMS::SONARScoring::operator=(const OpenMS::SONARScoring&)' 83 | SONARScoring& operator=(const SONARScoring& rhs); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 96%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathWorkflow.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathWorkflow.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathWorkflow.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathWorkflow.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathWorkflow.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathWorkflow.h:46, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathWorkflow.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathWorkflow.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h:46, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathHelper.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathWorkflow.h:53: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:159:17: note: by 'OpenMS::DIAScoring& OpenMS::DIAScoring::operator=(const OpenMS::DIAScoring&)' 159 | DIAScoring& operator=(const DIAScoring& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:43: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h:83:19: note: by 'OpenMS::SONARScoring& OpenMS::SONARScoring::operator=(const OpenMS::SONARScoring&)' 83 | SONARScoring& operator=(const SONARScoring& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:44: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:90:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 90 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:90:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:109:31: note: by 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' 109 | virtual LevMarqFitter1D & operator=(const LevMarqFitter1D & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:109:31: warning: 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:62:26: note: by 'virtual OpenMS::EmgFitter1D& OpenMS::EmgFitter1D::operator=(const OpenMS::EmgFitter1D&)' 62 | virtual EmgFitter1D& operator=(const EmgFitter1D& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:26: note: by 'OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const Opemake[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' nMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:68:16: note: by 'OpenMS::EmgModel& OpenMS::EmgModel::operator=(const OpenMS::EmgModel&)' 68 | EmgModel & operator=(const EmgModel & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:70:23: note: by 'OpenMS::GaussFilter& OpenMS::GaussFilter::operator=(const OpenMS::GaussFilter&)' 70 | class OPENMS_DLLAPI GaussFilter : | ^~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:89:23: note: by 'OpenMS::MRMFeatureFinderScoring& OpenMS::MRMFeatureFinderScoring::operator=(const OpenMS::MRMFeatureFinderScoring&)' 89 | class OPENMS_DLLAPI MRMFeatureFinderScoring : | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathWorkflow.h:63: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/MATH/MISC/EmgGradientDescent.h:64:23: note: by 'OpenMS::EmgGradientDescent& OpenMS::EmgGradientDescent::operator=(const OpenMS::EmgGradientDescent&)' 64 | class OPENMS_DLLAPI EmgGradientDescent : | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h:72:23: note: by 'OpenMS::PeakIntegrator& OpenMS::PeakIntegrator::operator=(const OpenMS::PeakIntegrator&)' 72 | class OPENMS_DLLAPI PeakIntegrator : | ^~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h:44: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:101:23: note: by 'OpenMS::SavitzkyGolayFilter& OpenMS::SavitzkyGolayFilter::operator=(const OpenMS::SavitzkyGolayFilter&)' 101 | class OPENMS_DLLAPI SavitzkyGolayFilter : | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:47: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h: In instantiation of 'class OpenMS::SignalToNoiseEstimator': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:81:9: required from 'class OpenMS::SignalToNoiseEstimatorMedian' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:174:51: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:43: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:86:37: note: by 'OpenMS::SignalToNoiseEstimator& OpenMS::SignalToNoiseEstimator::operator=(const OpenMS::SignalToNoiseEstimator&) [with Container = OpenMS::MSChromatogram]' 86 | inline SignalToNoiseEstimator & operator=(const SignalToNoiseEstimator & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h: In instantiation of 'class OpenMS::SignalToNoiseEstimatorMedian': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:174:51: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:153:43: note: by 'OpenMS::SignalToNoiseEstimatorMedian& OpenMS::SignalToNoiseEstimatorMedian::operator=(const OpenMS::SignalToNoiseEstimatorMedian&) [with Container = OpenMS::MSChromatogram]' 153 | inline SignalToNoiseEstimatorMedian & operator=(const SignalToNoiseEstimatorMedian & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:136:20: note: by 'OpenMS::PeakPickerMRM& OpenMS::PeakPickerMRM::operator=(const OpenMS::PeakPickerMRM&)' 136 | PeakPickerMRM& operator=(const PeakPickerMRM& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h:45: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:61:23: note: by 'OpenMS::LinearResampler& OpenMS::LinearResampler::operator=(const OpenMS::LinearResampler&)' 61 | class OPENMS_DLLAPI LinearResampler : | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h:57:23: note: by 'OpenMS::LinearResamplerAlign::operator=' 57 | class OPENMS_DLLAPI LinearResamplerAlign : | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h:784:31: note: by 'OpenMS::MRMTransitionGroupPicker& OpenMS::MRMTransitionGroupPicker::operator=(const OpenMS::MRMTransitionGroupPicker&)' 784 | MRMTransitionGroupPicker& operator=(const MRMTransitionGroupPicker& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathWorkflow.h:64: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SwathMapMassCorrection.h:52:23: note: by 'OpenMS::SwathMapMassCorrection& OpenMS::SwathMapMassCorrection::operator=(const OpenMS::SwathMapMassCorrection&)' 52 | class OPENMS_DLLAPI SwathMapMassCorrection : | ^~~~~~~~~~~~~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SwathWindowLoader.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SwathWindowLoader.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SwathWindowLoader.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SwathWindowLoader.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/SwathWindowLoader.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SwathMapMassCorrection.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SwathMapMassCorrection.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SwathMapMassCorrection.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SwathMapMassCorrection.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/SwathMapMassCorrection.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h:46, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SwathMapMassCorrection.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/SwathMapMassCorrection.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:159:17: note: by 'OpenMS::DIAScoring& OpenMS::DIAScoring::operator=(const OpenMS::DIAScoring&)' 159 | DIAScoring& operator=(const DIAScoring& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:43: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h:83:19: note: by 'OpenMS::SONARScoring& OpenMS::SONARScoring::operator=(const OpenMS::SONARScoring&)' 83 | SONARScoring& operator=(const SONARScoring& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:44: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:90:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 90 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:90:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:109:31: note: by 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' 109 | virtual LevMarqFitter1D & operator=(const LevMarqFitter1D & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:109:31: warning: 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:62:26: note: by 'virtual OpenMS::EmgFitter1D& OpenMS::EmgFitter1D::operator=(const OpenMS::EmgFitter1D&)' 62 | virtual EmgFitter1D& operator=(const EmgFitter1D& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:26: note: by 'OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:68:16: note: by 'OpenMS::EmgModel& OpenMS::EmgModel::operator=(const OpenMS::EmgModel&)' 68 | EmgModel & operator=(const EmgModel & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:70:23: note: by 'OpenMS::GaussFilter& OpenMS::GaussFilter::operator=(const OpenMS::GaussFilter&)' 70 | class OPENMS_DLLAPI GaussFilter : | ^~~~~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:49: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SwathMapMassCorrection.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:89:23: note: by 'OpenMS::MRMFeatureFinderScoring& OpenMS::MRMFeatureFinderScoring::operator=(const OpenMS::MRMFeatureFinderScoring&)' 89 | class OPENMS_DLLAPI MRMFeatureFinderScoring : | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SwathMapMassCorrection.h:52:23: note: by 'OpenMS::SwathMapMassCorrection& OpenMS::SwathMapMassCorrection::operator=(const OpenMS::SwathMapMassCorrection&)' 52 | class OPENMS_DLLAPI SwathMapMassCorrection : | ^~~~~~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SwathQC.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SwathQC.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SwathQC.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SwathQC.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/SwathQC.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/SwathQC.cpp:41: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/SwathMap.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SwathQC.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/SwathQC.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SpectrumAddition.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SpectrumAddition.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SpectrumAddition.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SpectrumAddition.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/SpectrumAddition.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/SpectrumAddition.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SpectrumAddition.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/SpectrumAddition.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/SpectrumAddition.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:61:23: note: by 'OpenMS::LinearResampler& OpenMS::LinearResampler::operator=(const OpenMS::LinearResampler&)' 61 | class OPENMS_DLLAPI LinearResampler : | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h:57:23: note: by 'OpenMS::LinearResamplerAlign::operator=' 57 | class OPENMS_DLLAPI LinearResamplerAlign : | ^~~~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/TransitionTSVFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/TransitionTSVFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/TransitionTSVFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/TransitionTSVFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/TransitionTSVFile.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TransitionTSVFile.h:43, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/TransitionTSVFile.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TransitionTSVFile.h:144:23: note: by 'OpenMS::TransitionTSVFile& OpenMS::TransitionTSVFile::operator=(const OpenMS::TransitionTSVFile&)' 144 | class OPENMS_DLLAPI TransitionTSVFile : | ^~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:73:35: note: by 'OpenMS::BinnedSpectrumCompareFunctor& OpenMS::BinnedSpectrumCompareFunctor::operator=(const OpenMS::BinnedSpectrumCompareFunctor&)' 73 | BinnedSpectrumCompareFunctor& operator=(const BinnedSpectrumCompareFunctor& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.h:73:34: note: by 'OpenMS::BinnedSpectralContrastAngle& OpenMS::BinnedSpectralContrastAngle::operator=(const OpenMS::BinnedSpectralContrastAngle&)' 73 | BinnedSpectralContrastAngle& operator=(const BinnedSpectralContrastAngle& source); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.h:42: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperimentHelper.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.h:69:23: note: by 'OpenMS::TargetedSpectraExtractor& OpenMS::TargetedSpectraExtractor::operator=(const OpenMS::TargetedSpectraExtractor&)' 69 | class OPENMS_DLLAPI TargetedSpectraExtractor : | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.cpp:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:70:23: note: by 'OpenMS::GaussFilter& OpenMS::GaussFilter::operator=(const OpenMS::GaussFilter&)' 70 | class OPENMS_DLLAPI GaussFilter : | ^~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.cpp:41: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:101:23: note: by 'OpenMS::SavitzkyGolayFilter& OpenMS::SavitzkyGolayFilter::operator=(const OpenMS::SavitzkyGolayFilter&)' 101 | class OPENMS_DLLAPI SavitzkyGolayFilter : | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.cpp:42: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.cpp:43: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MSPGenericFile.h:67:23: note: by 'OpenMS::MSPGenericFile& OpenMS::MSPGenericFile::operator=(const OpenMS::MSPGenericFile&)' 67 | class OPENMS_DLLAPI MSPGenericFile : | ^~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' .8.0/src/openms/source/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.cpp:48: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/AccurateMassSearchEngine.h:206:23: note: by 'OpenMS::AccurateMassSearchEngine& OpenMS::AccurateMassSearchEngine::operator=(const OpenMS::AccurateMassSearchEngine&)' 206 | class OPENMS_DLLAPI AccurateMassSearchEngine : | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.cpp:49: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TransitionTSVFile.h:144:23: note: by 'OpenMS::TransitionTSVFile& OpenMS::TransitionTSVFile::operator=(const OpenMS::TransitionTSVFile&)' 144 | class OPENMS_DLLAPI TransitionTSVFile : | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h: In instantiation of 'class OpenMS::SignalToNoiseEstimator': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:81:9: required from 'class OpenMS::SignalToNoiseEstimatorMedian' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.cpp:480:48: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:86:37: note: by 'OpenMS::SignalToNoiseEstimator& OpenMS::SignalToNoiseEstimator::operator=(const OpenMS::SignalToNoiseEstimator&) [with Container = OpenMS::MSSpectrum]' 86 | inline SignalToNoiseEstimator & operator=(const SignalToNoiseEstimator & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h: In instantiation of 'class OpenMS::SignalToNoiseEstimatorMedian': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.cpp:480:48: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:153:43: note: by 'OpenMS::SignalToNoiseEstimatorMedian& OpenMS::SignalToNoiseEstimatorMedian::operator=(const OpenMS::SignalToNoiseEstimatorMedian&) [with Container = OpenMS::MSSpectrum]' 153 | inline SignalToNoiseEstimatorMedian & operator=(const SignalToNoiseEstimatorMedian & source) | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/TransitionPQPFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/TransitionPQPFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/TransitionPQPFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/TransitionPQPFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/TransitionPQPFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TransitionTSVFile.h:43, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TransitionPQPFile.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/TransitionPQPFile.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TransitionTSVFile.h:144:23: note: by 'OpenMS::TransitionTSVFile& OpenMS::TransitionTSVFile::operator=(const OpenMS::TransitionTSVFile&)' 144 | class OPENMS_DLLAPI TransitionTSVFile : | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TransitionPQPFile.h:215:23: note: by 'OpenMS::TransitionPQPFile& OpenMS::TransitionPQPFile::operator=(const OpenMS::TransitionPQPFile&)' 215 | class OPENMS_DLLAPI TransitionPQPFile : | ^~~~~~~~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMS.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMS.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMS.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMS.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMS.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMS.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMS.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Peak1D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMS.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h: In instantiation of 'class OpenMS::SignalToNoiseEstimator': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:81:9: required from 'class OpenMS::SignalToNoiseEstimatorMedian' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.h:221:56: required from 'class OpenMS::SignalToNoiseOpenMS' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.cpp:156:64: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:86:37: note: by 'OpenMS::SignalToNoiseEstimator& OpenMS::SignalToNoiseEstimator::operator=(const OpenMS::SignalToNoiseEstimator&) [with Container = OpenMS::MSSpectrum]' 86 | inline SignalToNoiseEstimator & operator=(const SignalToNoiseEstimator & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h: In instantiation of 'class OpenMS::SignalToNoiseEstimatorMedian': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.h:221:56: required from 'class OpenMS::SignalToNoiseOpenMS' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.cpp:156:64: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:153:43: note: by 'OpenMS::SignalToNoiseEstimatorMedian& OpenMS::SignalToNoiseEstimatorMedian::operator=(const OpenMS::SignalToNoiseEstimatorMedian&) [with Container = OpenMS::MSSpectrum]' 153 | inline SignalToNoiseEstimatorMedian & operator=(const SignalToNoiseEstimatorMedian & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h: In instantiation of 'class OpenMS::SignalToNoiseEstimator': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:81:9: required from 'class OpenMS::SignalToNoiseEstimatorMedian' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.h:221:56: required from 'class OpenMS::SignalToNoiseOpenMS' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.cpp:157:70: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:86:37: note: by 'OpenMS::SignalToNoiseEstimator& OpenMS::SignalToNoiseEstimator::operator=(const OpenMS::SignalToNoiseEstimator&) [with Container = OpenMS::MSChromatogram]' 86 | inline SignalToNoiseEstimator & operator=(const SignalToNoiseEstimator & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h: In instantiation of 'class OpenMS::SignalToNoiseEstimatorMedian': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.h:221:56: required from 'class OpenMS::SignalToNoiseOpenMS' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.cpp:157:70: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:153:43: note: by 'OpenMS::SignalToNoiseEstimatorMedian& OpenMS::SignalToNoiseEstimatorMedian::operator=(const OpenMS::SignalToNoiseEstimatorMedian&) [with Container = OpenMS::MSChromatogram]' 153 | inline SignalToNoiseEstimatorMedian & operator=(const SignalToNoiseEstimatorMedian & source) | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSCached.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSCached.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSCached.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSCached.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSCached.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSCached.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSCached.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Peak1D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSCached.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSInMemory.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSInMemory.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSInMemory.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSInMemory.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSInMemory.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSInMemory.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSInMemory.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Peak1D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSInMemory.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessTransforming.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessTransforming.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessTransforming.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessTransforming.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessTransforming.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessQuadMZTransforming.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessQuadMZTransforming.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessQuadMZTransforming.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessQuadMZTransforming.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessQuadMZTransforming.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Peak1D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SimpleOpenMSSpectraAccessFactory.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SimpleOpenMSSpectraAccessFactory.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SimpleOpenMSSpectraAccessFactory.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SimpleOpenMSSpectraAccessFactory.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SimpleOpenMSSpectraAccessFactory.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SimpleOpenMSSpectraAccessFactory.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SimpleOpenMSSpectraAccessFactory.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /usr/include/c++/13/bits/locale_classes.h:40, from /usr/include/c++/13/bits/ios_base.h:41, from /usr/include/c++/13/ios:44, from /usr/include/c++/13/istream:40, from /usr/include/c++/13/fstream:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SimpleOpenMSSpectraAccessFactory.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/APPLICATIONS/ConsoleUtils.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/APPLICATIONS/ConsoleUtils.cpp.o -MF CMakeFiles/OpenMS.dir/source/APPLICATIONS/ConsoleUtils.cpp.o.d -o CMakeFiles/OpenMS.dir/source/APPLICATIONS/ConsoleUtils.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/APPLICATIONS/ConsoleUtils.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/APPLICATIONS/ParameterInformation.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/APPLICATIONS/ParameterInformation.cpp.o -MF CMakeFiles/OpenMS.dir/source/APPLICATIONS/ParameterInformation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/APPLICATIONS/ParameterInformation.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/APPLICATIONS/ParameterInformation.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/APPLICATIONS/INIUpdater.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/APPLICATIONS/INIUpdater.cpp.o -MF CMakeFiles/OpenMS.dir/source/APPLICATIONS/INIUpdater.cpp.o.d -o CMakeFiles/OpenMS.dir/source/APPLICATIONS/INIUpdater.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/APPLICATIONS/INIUpdater.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/APPLICATIONS/SearchEngineBase.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/APPLICATIONS/SearchEngineBase.cpp.o -MF CMakeFiles/OpenMS.dir/source/APPLICATIONS/SearchEngineBase.cpp.o.d -o CMakeFiles/OpenMS.dir/source/APPLICATIONS/SearchEngineBase.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/APPLICATIONS/SearchEngineBase.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/PeptideIndexing.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/APPLICATIONS/SearchEngineBase.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/PeptideIndexing.h:113:22: note: by 'OpenMS::PeptideIndexing& OpenMS::PeptideIndexing::operator=(const OpenMS::PeptideIndexing&)' 113 | class OPENMS_DLLAPI PeptideIndexing : | ^~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/APPLICATIONS/ToolHandler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/APPLICATIONS/ToolHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/APPLICATIONS/ToolHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/APPLICATIONS/ToolHandler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/APPLICATIONS/ToolHandler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/APPLICATIONS/TOPPBase.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/APPLICATIONS/TOPPBase.cpp.o -MF CMakeFiles/OpenMS.dir/source/APPLICATIONS/TOPPBase.cpp.o.d -o CMakeFiles/OpenMS.dir/source/APPLICATIONS/TOPPBase.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/APPLICATIONS/TOPPBase.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/APPLICATIONS/TOPPBase.cpp:55: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/APPLICATIONS/TOPPBase.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Linking CXX shared library ../../lib/libOpenMS.so cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenMS.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer 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Dependencies file "src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/MockObjects.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/compiler_depend.internal". Dependencies file "src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/SpectrumHelpers.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/compiler_depend.internal". Dependencies file "src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/TransitionHelper.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/compiler_depend.internal". Dependencies file "src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/Transitions.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/compiler_depend.internal". Dependencies file "src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/link.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenSwathAlgo make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build.make src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 0%] Linking CXX shared library ../../lib/libOpenSwathAlgo.so cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathAlgo.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,--dependency-file,CMakeFiles/OpenSwathAlgo.dir/link.d -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libOpenSwathAlgo.so -o ../../lib/libOpenSwathAlgo.so CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/Scoring.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/StatsHelpers.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/DataFrameWriter.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/MockObjects.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/SpectrumHelpers.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/TransitionHelper.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/Transitions.cpp.o -Wl,-rpath,::::::::::::::: make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 0%] Built target OpenSwathAlgo make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms/CMakeFiles/OpenMS_autogen.dir/build.make src/openms/CMakeFiles/OpenMS_autogen.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/openms /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS_autogen.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms/CMakeFiles/OpenMS_autogen.dir/build.make src/openms/CMakeFiles/OpenMS_autogen.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 0%] Automatic MOC for target OpenMS cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS_autogen.dir/AutogenInfo.json Release make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 0%] Built target OpenMS_autogen make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms/CMakeFiles/OpenMS.dir/build.make src/openms/CMakeFiles/OpenMS.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/openms /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/DependInfo.cmake "--color=" Dependencies file "src/openms/CMakeFiles/OpenMS.dir/OpenMS_autogen/mocs_compilation.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". 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Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoPostScoring.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AScore.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AccurateMassSearchEngine.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AhoCorasickAmbiguous.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". 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Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmBest.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPIons.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPMatrix.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmRanks.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmWorst.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusMapMergerAlgorithm.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". 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Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDBoostGraph.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDConflictResolverAlgorithm.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDDecoyProbability.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDMapper.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDMergerAlgorithm.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDRipper.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDScoreGetterSetter.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDScoreSwitcherAlgorithm.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/MessagePasserFactory.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/MetaboliteSpectralMatching.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PeptideIndexing.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PeptideProteinResolution.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". 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Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmMedian.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmQuantile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmThreshold.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureDistance.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". 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Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAPrescoring.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAScoring.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/IonMobilityScoring.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMAssay.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMBatchFeatureSelector.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMDecoy.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeaturePicker.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureQC.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureSelector.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMIonSeries.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMRTNormalizer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMScoring.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MasstraceCorrelator.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". 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Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SONARScoring.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SpectrumAddition.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SwathMapMassCorrection.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SwathQC.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SwathWindowLoader.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/TransitionPQPFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/TransitionTSVFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/PIP/LocalLinearMap.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/PIP/PeakIntensityPredictor.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/AbsoluteQuantitation.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/AbsoluteQuantitationMethod.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricNormalizer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantifier.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". 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Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/MZTrafoModel.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/PrecursorCorrection.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/TOFCalibration.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/DataFilters.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/Deisotoper.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/ElutionPeakDetection.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/FeatureFindingMetabo.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/IsotopeDistributionCache.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/MassTraceDetection.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/SplineInterpolatedPeaks.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/SplinePackage.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/ID/IDFilter.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedianRapid.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/FastLowessSmoothing.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/GaussFilter.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/GaussFilterAlgorithm.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/LowessSmoothing.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/SavitzkyGolayFilter.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/BernNorm.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ComplementFilter.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ComplementMarker.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/FilterFunctor.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/GoodDiffFilter.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/IntensityBalanceFilter.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/IsotopeDiffFilter.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/IsotopeMarker.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/LinearResampler.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/MarkerMower.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/NLargest.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/NeutralLossDiffFilter.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/NeutralLossMarker.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/Normalizer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ParentPeakMower.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/PeakMarker.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/Scaler.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/SpectraMerger.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/SqrtMower.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/TICFilter.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ThresholdMower.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/WindowMower.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/AbsoluteQuantitationMethodFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/AbsoluteQuantitationStandardsFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/Base64.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/Bzip2Ifstream.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/Bzip2InputStream.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/CVMappingFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/CachedMzML.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ChromeleonFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/CompressedInputSource.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ConsensusXMLFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ControlledVocabulary.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/CsvFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataAggregatingConsumer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataCachedConsumer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataChainingConsumer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataSqlConsumer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataStoringConsumer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataTransformingConsumer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataWritingConsumer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/NoopMSDataConsumer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SiriusFragmentAnnotation.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SiriusMzTabWriter.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SwathFileConsumer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DTA2DFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DTAFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/EDTAFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ExperimentalDesignFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FASTAFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FeatureXMLFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FileHandler.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FileTypes.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/GNPSMGFFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/GzipIfstream.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/GzipInputStream.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/AcqusHandler.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/CachedMzMLHandler.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ConsensusXMLHandler.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/FeatureXMLHandler.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/FidHandler.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/IndexedMzMLDecoder.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/IndexedMzMLHandler.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MascotXMLHandler.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzDataHandler.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzIdentMLDOMHandler.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzIdentMLHandler.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLHandler.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLHandlerHelper.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSpectrumDecoder.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSqliteHandler.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSqliteSwathHandler.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzQuantMLHandler.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzXMLHandler.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/PTMXMLHandler.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ParamXMLHandler.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ToolDescriptionHandler.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/TraMLHandler.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/UnimodXMLHandler.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/XMLHandler.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/XQuestResultXMLHandler.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HDF5Connector.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/IBSpectraFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/IdXMLFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/IndexedMzMLFileLoader.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/InspectInfile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/InspectOutfile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/KroenikFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/LibSVMEncoder.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MRMFeaturePickerFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MRMFeatureQCFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MS2File.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSNumpressCoder.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSPFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSPGenericFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSstatsFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotGenericFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotInfile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotRemoteQuery.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotXMLFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MsInspectFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzDataFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzIdentMLFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzMLFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzQCFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzQuantMLFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzTab.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzTabBase.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzTabFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzTabM.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzTabMFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzXMLFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OMSFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OMSFileLoad.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OMSFileStore.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OMSSACSVFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OMSSAXMLFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OPTIONS/FeatureFileOptions.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OPTIONS/PeakFileOptions.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OSWFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PTMXMLFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ParamCTDFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ParamXMLFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PeakTypeEstimator.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PepNovoInfile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PepNovoOutfile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PepXMLFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PepXMLFileMascot.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PercolatorInfile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PercolatorOutfile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ProtXMLFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/QcMLFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SVOutStream.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SequestInfile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SequestOutfile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SpecArrayFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SqMassFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SqliteConnector.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SwathFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/TextFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ToolDescriptionFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/TraMLFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/TransformationXMLFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/TriqlerFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/UnimodXMLFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzDataValidator.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzIdentMLValidator.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzMLValidator.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzQuantMLValidator.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/SemanticValidator.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/TraMLValidator.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/XMLValidator.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XMLFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XMassFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XQuestResultXMLFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XTandemInfile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XTandemXMLFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". 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Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/IONMOBILITY/IMTypes.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/AreaIterator.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/BaseFeature.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/ChromatogramPeak.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". 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Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletTransform.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ModelDescription.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexClustering.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMasses.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". 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-I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/BaselineFilter.dir/BaselineFilter.cpp.o -MF CMakeFiles/BaselineFilter.dir/BaselineFilter.cpp.o.d -o CMakeFiles/BaselineFilter.dir/BaselineFilter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/BaselineFilter.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/BaselineFilter.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/LogStream.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/BaselineFilter.cpp:36: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/BaselineFilter.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/BASELINE/MorphologicalFilter.h:60:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 60 | public std::iterator | ^~~~~~~~ /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/BASELINE/MorphologicalFilter.h:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/BASELINE/MorphologicalFilter.h:160:23: note: by 'OpenMS::MorphologicalFilter& OpenMS::MorphologicalFilter::operator=(const OpenMS::MorphologicalFilter&)' 160 | class OPENMS_DLLAPI MorphologicalFilter : | ^~~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 65%] Linking CXX executable ../../bin/BaselineFilter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/BaselineFilter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/BaselineFilter.dir/link.d CMakeFiles/BaselineFilter.dir/BaselineFilter.cpp.o -o ../../bin/BaselineFilter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 65%] Built target BaselineFilter make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/CometAdapter.dir/build.make src/topp/CMakeFiles/CometAdapter.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/CometAdapter.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/CometAdapter.dir/build.make src/topp/CMakeFiles/CometAdapter.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Building CXX object src/topp/CMakeFiles/CometAdapter.dir/CometAdapter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/CometAdapter.dir/CometAdapter.cpp.o -MF CMakeFiles/CometAdapter.dir/CometAdapter.cpp.o.d -o CMakeFiles/CometAdapter.dir/CometAdapter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/CometAdapter.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/PeptideIndexing.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/CometAdapter.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/PeptideIndexing.h:113:22: note: by 'OpenMS::PeptideIndexing& OpenMS::PeptideIndexing::operator=(const OpenMS::PeptideIndexing&)' 113 | class OPENMS_DLLAPI PeptideIndexing : | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/SpectrumMetaDataLookup.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/PepXMLFile.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/CometAdapter.cpp:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ProteinHit.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ProteinIdentification.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/SearchEngineBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/CometAdapter.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Linking CXX executable ../../bin/CometAdapter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/CometAdapter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/CometAdapter.dir/link.d CMakeFiles/CometAdapter.dir/CometAdapter.cpp.o -o ../../bin/CometAdapter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Built target CometAdapter make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/CompNovo.dir/build.make src/topp/CMakeFiles/CompNovo.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/CompNovo.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/CompNovo.dir/build.make src/topp/CMakeFiles/CompNovo.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Building CXX object src/topp/CMakeFiles/CompNovo.dir/CompNovo.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/CompNovo.dir/CompNovo.cpp.o -MF CMakeFiles/CompNovo.dir/CompNovo.cpp.o.d -o CMakeFiles/CompNovo.dir/CompNovo.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/CompNovo.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentification.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/CompNovo.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:42: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h:74:28: note: by 'OpenMS::ZhangSimilarityScore& OpenMS::ZhangSimilarityScore::operator=(const OpenMS::ZhangSimilarityScore&)' 74 | ZhangSimilarityScore & operator=(const ZhangSimilarityScore & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:44: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.h:107:34: note: by 'OpenMS::MassDecompositionAlgorithm& OpenMS::MassDecompositionAlgorithm::operator=(const OpenMS::MassDecompositionAlgorithm&)' 107 | MassDecompositionAlgorithm & operator=(const MassDecompositionAlgorithm & rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:45: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/CompNovo.cpp:36: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h:102:30: note: by 'OpenMS::CompNovoIonScoringBase& OpenMS::CompNovoIonScoringBase::operator=(const OpenMS::CompNovoIonScoringBase&)' 102 | CompNovoIonScoringBase & operator=(const CompNovoIonScoringBase & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:77:34: note: by 'OpenMS::CompNovoIdentificationBase& OpenMS::CompNovoIdentificationBase::operator=(const OpenMS::CompNovoIdentificationBase&)' 77 | CompNovoIdentificationBase & operator=(const CompNovoIdentificationBase & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentification.h:73:30: note: by 'OpenMS::CompNovoIdentification& OpenMS::CompNovoIdentification::operator=(const OpenMS::CompNovoIdentification&)' 73 | CompNovoIdentification & operator=(const CompNovoIdentification & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/CompNovo.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationCID.h:73:33: note: by 'OpenMS::CompNovoIdentificationCID& OpenMS::CompNovoIdentificationCID::operator=(const OpenMS::CompNovoIdentificationCID&)' 73 | CompNovoIdentificationCID & operator=(const CompNovoIdentificationCID & source); | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Linking CXX executable ../../bin/CompNovo cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/CompNovo.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/CompNovo.dir/link.d CMakeFiles/CompNovo.dir/CompNovo.cpp.o -o ../../bin/CompNovo -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Built target CompNovo make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/CompNovoCID.dir/build.make src/topp/CMakeFiles/CompNovoCID.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/CompNovoCID.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/CompNovoCID.dir/build.make src/topp/CMakeFiles/CompNovoCID.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 65%] Automatic MOC for target OpenMS_GUI cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotation1DCaret.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotation1DDistanceItem.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotation1DItem.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotation1DPeakItem.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotation1DTextItem.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotation1DVerticalLineItem.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotations1DContainer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/INIFileEditorWindow.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/SwathWizardBase.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPASBase.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPViewBase.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/AxisPainter.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/AxisTickCalculator.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/AxisWidget.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/ColorSelector.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/DataFilterDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/FeatureEditDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/LayerStatisticsDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/HistogramDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/ListFilterDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Plot1DGoToDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Plot1DPrefDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Plot2DGoToDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Plot2DPrefDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Plot3DPrefDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/PythonModuleRequirement.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/PythonSelector.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/SaveImageDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/SpectrumAlignmentDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/SwathTabWidget.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASIOMappingDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASInputFileDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASInputFilesDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASOutputFilesDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASToolConfigDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASVertexNameDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPViewOpenDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPViewPrefDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/ToolsDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIATreeTab.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DataSelectionTabs.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/EnhancedTabBar.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/EnhancedTabBarWidgetInterface.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/EnhancedWorkspace.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/FilterList.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/GUIProgressLoggerImpl.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/HistogramWidget.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/INTERFACES/IPeptideIds.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/InputFile.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/InputFileList.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/LayerDataChrom.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/LayerDataConsensus.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/LayerDataFeature.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/LayerDataIdent.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/LayerDataPeak.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/LayerListView.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/ListEditor.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/LogWindow.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/MISC/CommonDefs.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/MISC/ExternalProcessMBox.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/MISC/FilterableList.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/MISC/GUIHelpers.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/MetaDataBrowser.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/MultiGradient.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/MultiGradientSelector.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/OutputDirectory.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/Painter1DBase.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/ParamEditor.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/Plot1DCanvas.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/Plot1DWidget.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/Plot2DCanvas.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/Plot2DWidget.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/Plot3DCanvas.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/Plot3DOpenGLCanvas.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/Plot3DWidget.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/PlotWidget.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/RecentFilesMenu.h" AutoGen: Parsing 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"SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASToolVertex.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASTreeView.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASVertex.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASWidget.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPViewMenu.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TVControllerBase.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TVDIATreeTabController.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TVIdentificationViewController.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TVSpectraViewController.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TVToolDiscovery.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TableView.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TreeView.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISITORS/LayerStatistics.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/AcquisitionInfoVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/AcquisitionVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/BaseVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/BaseVisualizerGUI.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ContactPersonVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/DataProcessingVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/DigestionVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/DocumentIdentifierVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/GradientVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/HPLCVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/InstrumentSettingsVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/InstrumentVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/IonDetectorVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/IonSourceVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/MassAnalyzerVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/MetaInfoDescriptionVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/MetaInfoVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ModificationVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/PeptideHitVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/PrecursorVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ProductVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ProteinHitVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/SampleVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ScanWindowVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/SoftwareVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/SourceFileVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/SpectrumSettingsVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/TaggingVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DDistanceItem.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DItem.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DTextItem.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DVerticalLineItem.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/ANNOTATION/Annotations1DContainer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/APPLICATIONS/INIFileEditorWindow.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/APPLICATIONS/SwathWizardBase.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/AxisPainter.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/AxisTickCalculator.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/AxisWidget.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/ColorSelector.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/DataFilterDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/FeatureEditDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/HistogramDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/LayerStatisticsDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/ListFilterDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/Plot1DGoToDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/Plot1DPrefDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/Plot2DGoToDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/Plot2DPrefDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/Plot3DPrefDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/PythonModuleRequirement.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/PythonSelector.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/SaveImageDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/SpectrumAlignmentDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/SwathTabWidget.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/TOPPASIOMappingDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/TOPPASInputFileDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/TOPPASInputFilesDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/TOPPASOutputFilesDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/TOPPASToolConfigDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/TOPPASVertexNameDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/TOPPViewOpenDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/TOPPViewPrefDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/ToolsDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIATreeTab.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DataSelectionTabs.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/EnhancedTabBar.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/EnhancedTabBarWidgetInterface.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/EnhancedWorkspace.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/FilterList.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/GUIProgressLoggerImpl.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/HistogramWidget.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/INTERFACES/IPeptideIds.cpp" AutoGen warning: "SRC:/src/openms_gui/source/VISUAL/INTERFACES/IPeptideIds.cpp" is empty. AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/InputFile.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/InputFileList.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/LayerDataBase.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/LayerDataChrom.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/LayerDataConsensus.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/LayerDataFeature.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/LayerDataIdent.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/LayerDataPeak.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/LayerListView.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/ListEditor.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/LogWindow.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/MISC/CommonDefs.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/MISC/ExternalProcessMBox.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/MISC/FilterableList.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/MISC/GUIHelpers.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/MetaDataBrowser.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/MultiGradient.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/MultiGradientSelector.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/OutputDirectory.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/Painter1DBase.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/ParamEditor.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/Plot1DCanvas.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/Plot1DWidget.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/Plot2DCanvas.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/Plot2DWidget.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/Plot3DCanvas.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/Plot3DOpenGLCanvas.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/Plot3DWidget.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/PlotCanvas.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/PlotWidget.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/RecentFilesMenu.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/SequenceVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/SpectraIDViewTab.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/SpectraTreeTab.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/SwathLibraryStats.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPASEdge.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPASInputFileListVertex.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPASMergerVertex.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPASOutputFileListVertex.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPASResource.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPASResources.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPASScene.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPASSplitterVertex.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPASToolVertex.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPASTreeView.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPASVertex.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPASWidget.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPViewMenu.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TVControllerBase.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TVDIATreeTabController.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TVIdentificationViewController.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TVSpectraViewController.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TVToolDiscovery.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TableView.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TreeView.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISITORS/LayerStatistics.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/AcquisitionInfoVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/AcquisitionVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/BaseVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/BaseVisualizerGUI.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/ContactPersonVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/DataProcessingVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/DigestionVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/DocumentIdentifierVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/GradientVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/HPLCVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/InstrumentSettingsVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/InstrumentVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/IonDetectorVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/IonSourceVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/MassAnalyzerVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/MetaInfoDescriptionVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/MetaInfoVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/ModificationVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/PeptideHitVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/PrecursorVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/ProductVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/ProteinHitVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/SampleVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/ScanWindowVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/SoftwareVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/SourceFileVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/SpectrumSettingsVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/TaggingVisualizer.cpp" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/moc_INIFileEditorWindow.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/INIFileEditorWindow.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/moc_INIFileEditorWindow.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/INIFileEditorWindow.h AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QB5Z5ESAYE/moc_QApplicationTOPP.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/QB5Z5ESAYE/moc_QApplicationTOPP.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/moc_INIFileEditorWindow.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/moc_SwathWizardBase.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/SwathWizardBase.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/moc_SwathWizardBase.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/SwathWizardBase.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QB5Z5ESAYE/moc_QApplicationTOPP.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/moc_TOPPASBase.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPASBase.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/moc_TOPPASBase.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPASBase.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/moc_SwathWizardBase.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/moc_TOPPViewBase.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPViewBase.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/moc_TOPPViewBase.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPViewBase.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/moc_TOPPASBase.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_AxisWidget.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/AxisWidget.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_AxisWidget.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/AxisWidget.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_AxisWidget.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_ColorSelector.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/ColorSelector.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_ColorSelector.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/ColorSelector.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_ColorSelector.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_DataFilterDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/DataFilterDialog.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_DataFilterDialog.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/DataFilterDialog.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_DataFilterDialog.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_FeatureEditDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/FeatureEditDialog.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_FeatureEditDialog.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/FeatureEditDialog.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/moc_TOPPViewBase.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_HistogramDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/HistogramDialog.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_HistogramDialog.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/HistogramDialog.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_HistogramDialog.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_LayerStatisticsDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/LayerStatisticsDialog.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_LayerStatisticsDialog.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/LayerStatisticsDialog.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_LayerStatisticsDialog.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_ListFilterDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/ListFilterDialog.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_ListFilterDialog.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/ListFilterDialog.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_FeatureEditDialog.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Plot1DGoToDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Plot1DGoToDialog.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Plot1DGoToDialog.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Plot1DGoToDialog.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Plot1DGoToDialog.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Plot1DPrefDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Plot1DPrefDialog.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Plot1DPrefDialog.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Plot1DPrefDialog.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_ListFilterDialog.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Plot2DGoToDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Plot2DGoToDialog.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Plot2DGoToDialog.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Plot2DGoToDialog.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Plot1DPrefDialog.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Plot2DPrefDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Plot2DPrefDialog.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Plot2DPrefDialog.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Plot2DPrefDialog.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Plot2DGoToDialog.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Plot3DPrefDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Plot3DPrefDialog.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Plot3DPrefDialog.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Plot3DPrefDialog.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Plot2DPrefDialog.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_PythonModuleRequirement.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/PythonModuleRequirement.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_PythonModuleRequirement.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/PythonModuleRequirement.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Plot3DPrefDialog.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_PythonSelector.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/PythonSelector.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_PythonSelector.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/PythonSelector.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_PythonModuleRequirement.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_SaveImageDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/SaveImageDialog.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_SaveImageDialog.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/SaveImageDialog.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_SaveImageDialog.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_SpectrumAlignmentDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/SpectrumAlignmentDialog.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_SpectrumAlignmentDialog.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/SpectrumAlignmentDialog.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_PythonSelector.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_SwathTabWidget.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/SwathTabWidget.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_SwathTabWidget.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/SwathTabWidget.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_SpectrumAlignmentDialog.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASIOMappingDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASIOMappingDialog.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASIOMappingDialog.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASIOMappingDialog.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_SwathTabWidget.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASInputFileDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASInputFileDialog.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASInputFileDialog.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASInputFileDialog.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASInputFileDialog.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASInputFilesDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASInputFilesDialog.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASInputFilesDialog.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASInputFilesDialog.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASInputFilesDialog.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASOutputFilesDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASOutputFilesDialog.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASOutputFilesDialog.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASOutputFilesDialog.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASIOMappingDialog.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASToolConfigDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASToolConfigDialog.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASToolConfigDialog.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASToolConfigDialog.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASOutputFilesDialog.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASVertexNameDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASVertexNameDialog.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASVertexNameDialog.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASVertexNameDialog.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASVertexNameDialog.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPViewOpenDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPViewOpenDialog.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPViewOpenDialog.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPViewOpenDialog.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASToolConfigDialog.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPViewPrefDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPViewPrefDialog.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPViewPrefDialog.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPViewPrefDialog.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPViewOpenDialog.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TheoreticalSpectrumGenerationDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TheoreticalSpectrumGenerationDialog.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPViewPrefDialog.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_ToolsDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/ToolsDialog.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_ToolsDialog.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/ToolsDialog.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TheoreticalSpectrumGenerationDialog.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_DIATreeTab.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIATreeTab.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_DIATreeTab.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DIATreeTab.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_DIATreeTab.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_DataSelectionTabs.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DataSelectionTabs.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_DataSelectionTabs.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DataSelectionTabs.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_ToolsDialog.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_EnhancedTabBar.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/EnhancedTabBar.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_EnhancedTabBar.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/EnhancedTabBar.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_EnhancedTabBar.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_EnhancedTabBarWidgetInterface.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/EnhancedTabBarWidgetInterface.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_EnhancedTabBarWidgetInterface.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/EnhancedTabBarWidgetInterface.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_DataSelectionTabs.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_EnhancedWorkspace.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/EnhancedWorkspace.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_EnhancedWorkspace.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/EnhancedWorkspace.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_EnhancedTabBarWidgetInterface.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_FilterList.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/FilterList.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_FilterList.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/FilterList.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_EnhancedWorkspace.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_HistogramWidget.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/HistogramWidget.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_HistogramWidget.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/HistogramWidget.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_FilterList.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_InputFile.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/InputFile.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_InputFile.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/InputFile.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_InputFile.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_InputFileList.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/InputFileList.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_InputFileList.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/InputFileList.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_InputFileList.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_LayerListView.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/LayerListView.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_LayerListView.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerListView.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_LayerListView.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_ListEditor.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/ListEditor.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_ListEditor.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/ListEditor.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_HistogramWidget.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_LogWindow.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/LogWindow.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_LogWindow.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LogWindow.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_ListEditor.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/LHKLGULMBE/moc_FilterableList.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/MISC/FilterableList.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/LHKLGULMBE/moc_FilterableList.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/MISC/FilterableList.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/LHKLGULMBE/moc_FilterableList.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_MetaDataBrowser.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/MetaDataBrowser.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_MetaDataBrowser.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/MetaDataBrowser.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_LogWindow.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_MultiGradientSelector.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/MultiGradientSelector.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_MultiGradientSelector.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/MultiGradientSelector.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_MultiGradientSelector.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_OutputDirectory.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/OutputDirectory.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_OutputDirectory.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/OutputDirectory.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_OutputDirectory.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_ParamEditor.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/ParamEditor.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_ParamEditor.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/ParamEditor.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_ParamEditor.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Plot1DCanvas.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/Plot1DCanvas.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Plot1DCanvas.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot1DCanvas.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_MetaDataBrowser.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Plot1DWidget.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/Plot1DWidget.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Plot1DWidget.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot1DWidget.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Plot1DCanvas.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Plot2DCanvas.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/Plot2DCanvas.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Plot2DCanvas.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot2DCanvas.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Plot1DWidget.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Plot2DWidget.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/Plot2DWidget.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Plot2DWidget.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot2DWidget.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Plot2DCanvas.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Plot3DCanvas.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/Plot3DCanvas.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Plot3DCanvas.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot3DCanvas.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Plot2DWidget.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Plot3DOpenGLCanvas.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/Plot3DOpenGLCanvas.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Plot3DOpenGLCanvas.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot3DOpenGLCanvas.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Plot3DOpenGLCanvas.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Plot3DWidget.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/Plot3DWidget.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Plot3DWidget.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot3DWidget.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Plot3DCanvas.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_PlotCanvas.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_PlotCanvas.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Plot3DWidget.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_PlotWidget.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/PlotWidget.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_PlotWidget.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotWidget.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_PlotCanvas.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_RecentFilesMenu.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/RecentFilesMenu.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_RecentFilesMenu.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/RecentFilesMenu.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_RecentFilesMenu.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SequenceVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/SequenceVisualizer.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SequenceVisualizer.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/SequenceVisualizer.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SequenceVisualizer.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SpectraIDViewTab.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/SpectraIDViewTab.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SpectraIDViewTab.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/SpectraIDViewTab.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_PlotWidget.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SpectraTreeTab.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/SpectraTreeTab.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SpectraTreeTab.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/SpectraTreeTab.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SpectraIDViewTab.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SwathLibraryStats.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/SwathLibraryStats.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SwathLibraryStats.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/SwathLibraryStats.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SwathLibraryStats.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASEdge.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASEdge.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASEdge.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TOPPASEdge.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASEdge.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASInputFileListVertex.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASInputFileListVertex.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASInputFileListVertex.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TOPPASInputFileListVertex.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASInputFileListVertex.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASMergerVertex.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASMergerVertex.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASMergerVertex.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TOPPASMergerVertex.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASMergerVertex.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASOutputFileListVertex.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASOutputFileListVertex.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASOutputFileListVertex.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TOPPASOutputFileListVertex.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASOutputFileListVertex.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASResource.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASResource.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASResource.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TOPPASResource.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASResource.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASResources.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASResources.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASResources.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TOPPASResources.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASResources.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASScene.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASScene.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASScene.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TOPPASScene.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASScene.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASSplitterVertex.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASSplitterVertex.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASSplitterVertex.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TOPPASSplitterVertex.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASSplitterVertex.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASToolVertex.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASToolVertex.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASToolVertex.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TOPPASToolVertex.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASToolVertex.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASTreeView.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASTreeView.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASTreeView.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TOPPASTreeView.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASTreeView.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASVertex.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASVertex.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASVertex.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TOPPASVertex.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASVertex.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASWidget.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASWidget.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASWidget.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TOPPASWidget.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SpectraTreeTab.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPViewMenu.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPViewMenu.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPViewMenu.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TOPPViewMenu.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASWidget.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TVControllerBase.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TVControllerBase.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TVControllerBase.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TVControllerBase.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TVControllerBase.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TVDIATreeTabController.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TVDIATreeTabController.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TVDIATreeTabController.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TVDIATreeTabController.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPViewMenu.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TVIdentificationViewController.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TVIdentificationViewController.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TVIdentificationViewController.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TVIdentificationViewController.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TVDIATreeTabController.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TVSpectraViewController.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TVSpectraViewController.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TVSpectraViewController.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TVSpectraViewController.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TVIdentificationViewController.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TableView.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TableView.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TableView.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TableView.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TableView.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TreeView.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TreeView.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TreeView.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TreeView.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TreeView.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_AcquisitionInfoVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/AcquisitionInfoVisualizer.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_AcquisitionInfoVisualizer.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/AcquisitionInfoVisualizer.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_AcquisitionInfoVisualizer.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_AcquisitionVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/AcquisitionVisualizer.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_AcquisitionVisualizer.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/AcquisitionVisualizer.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_AcquisitionVisualizer.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_BaseVisualizerGUI.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/BaseVisualizerGUI.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_BaseVisualizerGUI.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/BaseVisualizerGUI.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_BaseVisualizerGUI.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ContactPersonVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ContactPersonVisualizer.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ContactPersonVisualizer.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ContactPersonVisualizer.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ContactPersonVisualizer.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_DataProcessingVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/DataProcessingVisualizer.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_DataProcessingVisualizer.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/DataProcessingVisualizer.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_DataProcessingVisualizer.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_DigestionVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/DigestionVisualizer.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_DigestionVisualizer.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/DigestionVisualizer.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_DigestionVisualizer.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_DocumentIdentifierVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/DocumentIdentifierVisualizer.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_DocumentIdentifierVisualizer.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/DocumentIdentifierVisualizer.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TVSpectraViewController.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ExperimentalSettingsVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ExperimentalSettingsVisualizer.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_DocumentIdentifierVisualizer.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_GradientVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/GradientVisualizer.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_GradientVisualizer.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/GradientVisualizer.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_GradientVisualizer.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_HPLCVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/HPLCVisualizer.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_HPLCVisualizer.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/HPLCVisualizer.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ExperimentalSettingsVisualizer.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_InstrumentSettingsVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/InstrumentSettingsVisualizer.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_InstrumentSettingsVisualizer.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/InstrumentSettingsVisualizer.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_HPLCVisualizer.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_InstrumentVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/InstrumentVisualizer.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_InstrumentVisualizer.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/InstrumentVisualizer.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_InstrumentSettingsVisualizer.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_IonDetectorVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/IonDetectorVisualizer.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_IonDetectorVisualizer.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/IonDetectorVisualizer.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_IonDetectorVisualizer.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_IonSourceVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/IonSourceVisualizer.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_IonSourceVisualizer.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/IonSourceVisualizer.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_InstrumentVisualizer.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_MassAnalyzerVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/MassAnalyzerVisualizer.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_MassAnalyzerVisualizer.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/MassAnalyzerVisualizer.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_IonSourceVisualizer.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_MetaInfoDescriptionVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/MetaInfoDescriptionVisualizer.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_MetaInfoDescriptionVisualizer.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/MetaInfoDescriptionVisualizer.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_MassAnalyzerVisualizer.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_MetaInfoVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/MetaInfoVisualizer.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_MetaInfoVisualizer.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/MetaInfoVisualizer.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_MetaInfoDescriptionVisualizer.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ModificationVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ModificationVisualizer.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ModificationVisualizer.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ModificationVisualizer.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_MetaInfoVisualizer.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_PeptideHitVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/PeptideHitVisualizer.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_PeptideHitVisualizer.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/PeptideHitVisualizer.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ModificationVisualizer.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_PeptideIdentificationVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_PeptideIdentificationVisualizer.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_PeptideHitVisualizer.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_PrecursorVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/PrecursorVisualizer.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_PrecursorVisualizer.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/PrecursorVisualizer.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_PeptideIdentificationVisualizer.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ProductVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ProductVisualizer.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ProductVisualizer.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ProductVisualizer.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_PrecursorVisualizer.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ProteinHitVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ProteinHitVisualizer.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ProteinHitVisualizer.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ProteinHitVisualizer.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ProductVisualizer.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ProteinIdentificationVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ProteinIdentificationVisualizer.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ProteinHitVisualizer.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_SampleVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/SampleVisualizer.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_SampleVisualizer.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/SampleVisualizer.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_SampleVisualizer.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ScanWindowVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ScanWindowVisualizer.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ScanWindowVisualizer.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ScanWindowVisualizer.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ProteinIdentificationVisualizer.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_SoftwareVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/SoftwareVisualizer.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_SoftwareVisualizer.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/SoftwareVisualizer.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ScanWindowVisualizer.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_SourceFileVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/SourceFileVisualizer.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_SourceFileVisualizer.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/SourceFileVisualizer.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_SoftwareVisualizer.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_SpectrumSettingsVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/SpectrumSettingsVisualizer.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_SpectrumSettingsVisualizer.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/SpectrumSettingsVisualizer.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_SourceFileVisualizer.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_TaggingVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/TaggingVisualizer.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_TaggingVisualizer.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/TaggingVisualizer.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_SpectrumSettingsVisualizer.cpp.d" AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_TaggingVisualizer.cpp.d" AutoMoc: Generating MOC compilation "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/AutogenUsed.txt" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Built target OpenMS_GUI_autogen make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/ConsensusID.dir/build.make src/topp/CMakeFiles/ConsensusID.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/ConsensusID.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/ConsensusID.dir/build.make src/topp/CMakeFiles/ConsensusID.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Building CXX object src/topp/CMakeFiles/CompNovoCID.dir/CompNovoCID.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/CompNovoCID.dir/CompNovoCID.cpp.o -MF CMakeFiles/CompNovoCID.dir/CompNovoCID.cpp.o.d -o CMakeFiles/CompNovoCID.dir/CompNovoCID.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/CompNovoCID.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentification.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/CompNovoCID.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:42: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h:74:28: note: by 'OpenMS::ZhangSimilarityScore& OpenMS::ZhangSimilarityScore::operator=(const OpenMS::ZhangSimilarityScore&)' 74 | ZhangSimilarityScore & operator=(const ZhangSimilarityScore & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:44: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.h:107:34: note: by 'OpenMS::MassDecompositionAlgorithm& OpenMS::MassDecompositionAlgorithm::operator=(const OpenMS::MassDecompositionAlgorithm&)' 107 | MassDecompositionAlgorithm & operator=(const MassDecompositionAlgorithm & rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:45: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/CompNovoCID.cpp:36: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h:102:30: note: by 'OpenMS::CompNovoIonScoringBase& OpenMS::CompNovoIonScoringBase::operator=(const OpenMS::CompNovoIonScoringBase&)' 102 | CompNovoIonScoringBase & operator=(const CompNovoIonScoringBase & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:77:34: note: by 'OpenMS::CompNovoIdentificationBase& OpenMS::CompNovoIdentificationBase::operator=(const OpenMS::CompNovoIdentificationBase&)' 77 | CompNovoIdentificationBase & operator=(const CompNovoIdentificationBase & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentification.h:73:30: note: by 'OpenMS::CompNovoIdentification& OpenMS::CompNovoIdentification::operator=(const OpenMS::CompNovoIdentification&)' 73 | CompNovoIdentification & operator=(const CompNovoIdentification & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/CompNovoCID.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationCID.h:73:33: note: by 'OpenMS::CompNovoIdentificationCID& OpenMS::CompNovoIdentificationCID::operator=(const OpenMS::CompNovoIdentificationCID&)' 73 | CompNovoIdentificationCID & operator=(const CompNovoIdentificationCID & source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Linking CXX executable ../../bin/CompNovoCID cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/CompNovoCID.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/CompNovoCID.dir/link.d CMakeFiles/CompNovoCID.dir/CompNovoCID.cpp.o -o ../../bin/CompNovoCID -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Built target CompNovoCID make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/ConsensusMapNormalizer.dir/build.make src/topp/CMakeFiles/ConsensusMapNormalizer.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/ConsensusMapNormalizer.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/ConsensusMapNormalizer.dir/build.make src/topp/CMakeFiles/ConsensusMapNormalizer.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Building CXX object src/topp/CMakeFiles/ConsensusMapNormalizer.dir/ConsensusMapNormalizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/ConsensusMapNormalizer.dir/ConsensusMapNormalizer.cpp.o -MF CMakeFiles/ConsensusMapNormalizer.dir/ConsensusMapNormalizer.cpp.o.d -o CMakeFiles/ConsensusMapNormalizer.dir/ConsensusMapNormalizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/ConsensusMapNormalizer.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/ConsensusXMLFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/ConsensusMapNormalizer.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/FileTypes.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/FileHandler.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/ConsensusMapNormalizer.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Linking CXX executable ../../bin/ConsensusMapNormalizer cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/ConsensusMapNormalizer.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/ConsensusMapNormalizer.dir/link.d CMakeFiles/ConsensusMapNormalizer.dir/ConsensusMapNormalizer.cpp.o -o ../../bin/ConsensusMapNormalizer -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Built target ConsensusMapNormalizer make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/CruxAdapter.dir/build.make src/topp/CMakeFiles/CruxAdapter.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/CruxAdapter.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/CruxAdapter.dir/build.make src/topp/CMakeFiles/CruxAdapter.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Building CXX object src/topp/CMakeFiles/ConsensusID.dir/ConsensusID.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/ConsensusID.dir/ConsensusID.cpp.o -MF CMakeFiles/ConsensusID.dir/ConsensusID.cpp.o.d -o CMakeFiles/ConsensusID.dir/ConsensusID.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/ConsensusID.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/ConsensusID.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:146:27: note: by 'OpenMS::ConsensusIDAlgorithm& OpenMS::ConsensusIDAlgorithm::operator=(const OpenMS::ConsensusIDAlgorithm&)' 146 | ConsensusIDAlgorithm& operator=(const ConsensusIDAlgorithm&); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmPEPMatrix.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/ConsensusID.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.h:81:37: note: by 'OpenMS::ConsensusIDAlgorithmSimilarity& OpenMS::ConsensusIDAlgorithmSimilarity::operator=(const OpenMS::ConsensusIDAlgorithmSimilarity&)' 81 | ConsensusIDAlgorithmSimilarity& operator=(const ConsensusIDAlgorithmSimilarity&); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmPEPMatrix.h:68:36: note: by 'OpenMS::ConsensusIDAlgorithmPEPMatrix& OpenMS::ConsensusIDAlgorithmPEPMatrix::operator=(const OpenMS::ConsensusIDAlgorithmPEPMatrix&)' 68 | ConsensusIDAlgorithmPEPMatrix& operator=(const ConsensusIDAlgorithmPEPMatrix&); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/ConsensusID.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmPEPIons.h:66:34: note: by 'OpenMS::ConsensusIDAlgorithmPEPIons& OpenMS::ConsensusIDAlgorithmPEPIons::operator=(const OpenMS::ConsensusIDAlgorithmPEPIons&)' 66 | ConsensusIDAlgorithmPEPIons& operator=(const ConsensusIDAlgorithmPEPIons&); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmBest.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/ConsensusID.cpp:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.h:86:35: note: by 'OpenMS::ConsensusIDAlgorithmIdentity& OpenMS::ConsensusIDAlgorithmIdentity::operator=(const OpenMS::ConsensusIDAlgorithmIdentity&)' 86 | ConsensusIDAlgorithmIdentity& operator=(const ConsensusIDAlgorithmIdentity&); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmBest.h:60:31: note: by 'OpenMS::ConsensusIDAlgorithmBest& OpenMS::ConsensusIDAlgorithmBest::operator=(const OpenMS::ConsensusIDAlgorithmBest&)' 60 | ConsensusIDAlgorithmBest& operator=(const ConsensusIDAlgorithmBest&); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/ConsensusID.cpp:41: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmWorst.h:60:32: note: by 'OpenMS::ConsensusIDAlgorithmWorst& OpenMS::ConsensusIDAlgorithmWorst::operator=(const OpenMS::ConsensusIDAlgorithmWorst&)' 60 | ConsensusIDAlgorithmWorst& operator=(const ConsensusIDAlgorithmWorst&); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/ConsensusID.cpp:42: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmAverage.h:60:34: note: by 'OpenMS::ConsensusIDAlgorithmAverage& OpenMS::ConsensusIDAlgorithmAverage::operator=(const OpenMS::ConsensusIDAlgorithmAverage&)' 60 | ConsensusIDAlgorithmAverage& operator=(const ConsensusIDAlgorithmAverage&); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/ConsensusID.cpp:43: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmRanks.h:66:32: note: by 'OpenMS::ConsensusIDAlgorithmRanks& OpenMS::ConsensusIDAlgorithmRanks::operator=(const OpenMS::ConsensusIDAlgorithmRanks&)' 66 | ConsensusIDAlgorithmRanks& operator=(const ConsensusIDAlgorithmRanks&); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/ConsensusID.cpp:44: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/ConsensusID.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:120:32: note: by 'OpenMS::FeatureGroupingAlgorithm& OpenMS::FeatureGroupingAlgorithm::operator=(const OpenMS::FeatureGroupingAlgorithm&)' 120 | FeatureGroupingAlgorithm & operator=(const FeatureGroupingAlgorithm &); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.h:99:33: note: by 'OpenMS::FeatureGroupingAlgorithmQT& OpenMS::FeatureGroupingAlgorithmQT::operator=(const OpenMS::FeatureGroupingAlgorithmQT&)' 99 | FeatureGroupingAlgorithmQT& operator=(const FeatureGroupingAlgorithmQT&); | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Building CXX object src/topp/CMakeFiles/CruxAdapter.dir/CruxAdapter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/CruxAdapter.dir/CruxAdapter.cpp.o -MF CMakeFiles/CruxAdapter.dir/CruxAdapter.cpp.o.d -o CMakeFiles/CruxAdapter.dir/CruxAdapter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/CruxAdapter.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLHandler.h:43, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataWritingConsumer.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/CruxAdapter.cpp:47: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/CruxAdapter.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Linking CXX executable ../../bin/ConsensusID cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/ConsensusID.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/ConsensusID.dir/link.d CMakeFiles/ConsensusID.dir/ConsensusID.cpp.o -o ../../bin/ConsensusID -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Built target ConsensusID make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/DatabaseSuitability.dir/build.make src/topp/CMakeFiles/DatabaseSuitability.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/DatabaseSuitability.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/DatabaseSuitability.dir/build.make src/topp/CMakeFiles/DatabaseSuitability.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Linking CXX executable ../../bin/CruxAdapter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/CruxAdapter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/CruxAdapter.dir/link.d CMakeFiles/CruxAdapter.dir/CruxAdapter.cpp.o -o ../../bin/CruxAdapter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Built target CruxAdapter make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/Decharger.dir/build.make src/topp/CMakeFiles/Decharger.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/Decharger.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/Decharger.dir/build.make src/topp/CMakeFiles/Decharger.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Building CXX object src/topp/CMakeFiles/Decharger.dir/Decharger.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/Decharger.dir/Decharger.cpp.o -MF CMakeFiles/Decharger.dir/Decharger.cpp.o.d -o CMakeFiles/Decharger.dir/Decharger.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/Decharger.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DECHARGING/FeatureDeconvolution.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/Decharger.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/Decharger.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DECHARGING/FeatureDeconvolution.h:44: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DECHARGING/FeatureDeconvolution.h:80:27: note: by 'OpenMS::FeatureDeconvolution& OpenMS::FeatureDeconvolution::operator=(const OpenMS::FeatureDeconvolution&)' 80 | FeatureDeconvolution& operator=(const FeatureDeconvolution& source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Building CXX object src/topp/CMakeFiles/DatabaseSuitability.dir/DatabaseSuitability.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/DatabaseSuitability.dir/DatabaseSuitability.cpp.o -MF CMakeFiles/DatabaseSuitability.dir/DatabaseSuitability.cpp.o.d -o CMakeFiles/DatabaseSuitability.dir/DatabaseSuitability.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/DatabaseSuitability.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/Ms2IdentificationRate.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/DatabaseSuitability.cpp:44: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/QCBase.h:132:20: warning: identifier 'requires' is a keyword in C++20 [-Wc++20-compat] 132 | virtual Status requires() const = 0; | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/FalseDiscoveryRate.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/DatabaseSuitability.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/DatabaseSuitability.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/FalseDiscoveryRate.h:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/FalseDiscoveryRate.h:236:25: note: by 'OpenMS::FalseDiscoveryRate& OpenMS::FalseDiscoveryRate::operator=(const OpenMS::FalseDiscoveryRate&)' 236 | FalseDiscoveryRate& operator=(const FalseDiscoveryRate&); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/DatabaseSuitability.cpp:43: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/DBSuitability.h:70:23: note: by 'OpenMS::DBSuitability& OpenMS::DBSuitability::operator=(const OpenMS::DBSuitability&)' 70 | class OPENMS_DLLAPI DBSuitability: | ^~~~~~~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/DatabaseSuitability.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::FilterPeptideEvidences(EvidenceFilter&, std::vector&) [with EvidenceFilter = DigestionFilter]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:486:68: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:728:35: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::DigestionFilter]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 728 | std::not1(filter)); | ~~~~~~~~~^~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1138:24: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1147:26: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMetaValue]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:572:26: required from 'static void OpenMS::IDFilter::keepMatchingItemsUnroll(IDContainer&, const Predicate&) [with IDContainer = std::vector; Predicate = HasMetaValue]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1210:30: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMetaValue]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1358:31: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1368:35: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Linking CXX executable ../../bin/Decharger cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/Decharger.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/Decharger.dir/link.d CMakeFiles/Decharger.dir/Decharger.cpp.o -o ../../bin/Decharger -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Built target Decharger make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/DTAExtractor.dir/build.make src/topp/CMakeFiles/DTAExtractor.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/DTAExtractor.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/DTAExtractor.dir/build.make src/topp/CMakeFiles/DTAExtractor.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Linking CXX executable ../../bin/DatabaseSuitability cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/DatabaseSuitability.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/DatabaseSuitability.dir/link.d CMakeFiles/DatabaseSuitability.dir/DatabaseSuitability.cpp.o -o ../../bin/DatabaseSuitability -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Built target DatabaseSuitability make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/EICExtractor.dir/build.make src/topp/CMakeFiles/EICExtractor.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/EICExtractor.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/EICExtractor.dir/build.make src/topp/CMakeFiles/EICExtractor.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Building CXX object src/topp/CMakeFiles/DTAExtractor.dir/DTAExtractor.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/DTAExtractor.dir/DTAExtractor.cpp.o -MF CMakeFiles/DTAExtractor.dir/DTAExtractor.cpp.o.d -o CMakeFiles/DTAExtractor.dir/DTAExtractor.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/DTAExtractor.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/DTAExtractor.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/XMLFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzMLFile.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/DTAExtractor.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 67%] Linking CXX executable ../../bin/DTAExtractor cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/DTAExtractor.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/DTAExtractor.dir/link.d CMakeFiles/DTAExtractor.dir/DTAExtractor.cpp.o -o ../../bin/DTAExtractor -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 67%] Built target DTAExtractor make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/ExternalCalibration.dir/build.make src/topp/CMakeFiles/ExternalCalibration.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/ExternalCalibration.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/ExternalCalibration.dir/build.make src/topp/CMakeFiles/ExternalCalibration.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 68%] Building CXX object src/topp/CMakeFiles/ExternalCalibration.dir/ExternalCalibration.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/ExternalCalibration.dir/ExternalCalibration.cpp.o -MF CMakeFiles/ExternalCalibration.dir/ExternalCalibration.cpp.o.d -o CMakeFiles/ExternalCalibration.dir/ExternalCalibration.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/ExternalCalibration.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/CALIBRATION/InternalCalibration.h:43, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/ExternalCalibration.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/ExternalCalibration.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 68%] Linking CXX executable ../../bin/ExternalCalibration cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/ExternalCalibration.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/ExternalCalibration.dir/link.d CMakeFiles/ExternalCalibration.dir/ExternalCalibration.cpp.o -o ../../bin/ExternalCalibration -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 68%] Built target ExternalCalibration make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FalseDiscoveryRate.dir/build.make src/topp/CMakeFiles/FalseDiscoveryRate.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/FalseDiscoveryRate.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FalseDiscoveryRate.dir/build.make src/topp/CMakeFiles/FalseDiscoveryRate.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Building CXX object src/topp/CMakeFiles/EICExtractor.dir/EICExtractor.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/EICExtractor.dir/EICExtractor.cpp.o -MF CMakeFiles/EICExtractor.dir/EICExtractor.cpp.o.d -o CMakeFiles/EICExtractor.dir/EICExtractor.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/EICExtractor.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/EDTAFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/EICExtractor.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/EICExtractor.cpp:36: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/EICExtractor.cpp:43: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/EICExtractor.cpp:44: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:70:23: note: by 'OpenMS::GaussFilter& OpenMS::GaussFilter::operator=(const OpenMS::GaussFilter&)' 70 | class OPENMS_DLLAPI GaussFilter : | ^~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/EICExtractor.cpp:45: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/EICExtractor.cpp:46: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.h:140:40: note: by 'OpenMS::OptimizePeakDeconvolution& OpenMS::OptimizePeakDeconvolution::operator=(const OpenMS::OptimizePeakDeconvolution&)' 140 | inline OptimizePeakDeconvolution & operator=(const OptimizePeakDeconvolution & opt) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.h:78:23: note: by 'OpenMS::PeakPickerCWT& OpenMS::PeakPickerCWT::operator=(const OpenMS::PeakPickerCWT&)' 78 | class OPENMS_DLLAPI PeakPickerCWT : | ^~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h: In instantiation of 'class OpenMS::SignalToNoiseEstimator': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:81:9: required from 'class OpenMS::SignalToNoiseEstimatorMedian' /builddir/build/BUILD/OpenMS-2.8.0/src/topp/EICExtractor.cpp:338:52: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:86:37: note: by 'OpenMS::SignalToNoiseEstimator& OpenMS::SignalToNoiseEstimator::operator=(const OpenMS::SignalToNoiseEstimator&) [with Container = OpenMS::MSSpectrum]' 86 | inline SignalToNoiseEstimator & operator=(const SignalToNoiseEstimator & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h: In instantiation of 'class OpenMS::SignalToNoiseEstimatorMedian': /builddir/build/BUILD/OpenMS-2.8.0/src/topp/EICExtractor.cpp:338:52: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:153:43: note: by 'OpenMS::SignalToNoiseEstimatorMedian& OpenMS::SignalToNoiseEstimatorMedian::operator=(const OpenMS::SignalToNoiseEstimatorMedian&) [with Container = OpenMS::MSSpectrum]' 153 | inline SignalToNoiseEstimatorMedian & operator=(const SignalToNoiseEstimatorMedian & source) | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 68%] Linking CXX executable ../../bin/EICExtractor cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/EICExtractor.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/EICExtractor.dir/link.d CMakeFiles/EICExtractor.dir/EICExtractor.cpp.o -o ../../bin/EICExtractor -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 68%] Built target EICExtractor make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FeatureFinderCentroided.dir/build.make src/topp/CMakeFiles/FeatureFinderCentroided.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/FeatureFinderCentroided.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FeatureFinderCentroided.dir/build.make src/topp/CMakeFiles/FeatureFinderCentroided.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 68%] Building CXX object src/topp/CMakeFiles/FalseDiscoveryRate.dir/FalseDiscoveryRate.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FalseDiscoveryRate.dir/FalseDiscoveryRate.cpp.o -MF CMakeFiles/FalseDiscoveryRate.dir/FalseDiscoveryRate.cpp.o.d -o CMakeFiles/FalseDiscoveryRate.dir/FalseDiscoveryRate.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FalseDiscoveryRate.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/FalseDiscoveryRate.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FalseDiscoveryRate.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FalseDiscoveryRate.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/FalseDiscoveryRate.h:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/FalseDiscoveryRate.h:236:25: note: by 'OpenMS::FalseDiscoveryRate& OpenMS::FalseDiscoveryRate::operator=(const OpenMS::FalseDiscoveryRate&)' 236 | FalseDiscoveryRate& operator=(const FalseDiscoveryRate&); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FalseDiscoveryRate.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::FilterPeptideEvidences(EvidenceFilter&, std::vector&) [with EvidenceFilter = DigestionFilter]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:486:68: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:728:35: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::DigestionFilter]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 728 | std::not1(filter)); | ~~~~~~~~~^~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1138:24: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1147:26: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMetaValue]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:572:26: required from 'static void OpenMS::IDFilter::keepMatchingItemsUnroll(IDContainer&, const Predicate&) [with IDContainer = std::vector; Predicate = HasMetaValue]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1210:30: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMetaValue]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1358:31: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1368:35: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 68%] Linking CXX executable ../../bin/FalseDiscoveryRate cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FalseDiscoveryRate.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/FalseDiscoveryRate.dir/link.d CMakeFiles/FalseDiscoveryRate.dir/FalseDiscoveryRate.cpp.o -o ../../bin/FalseDiscoveryRate -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 68%] Built target FalseDiscoveryRate make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FeatureFinderIdentification.dir/build.make src/topp/CMakeFiles/FeatureFinderIdentification.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/FeatureFinderIdentification.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FeatureFinderIdentification.dir/build.make src/topp/CMakeFiles/FeatureFinderIdentification.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 68%] Building CXX object src/topp/CMakeFiles/FeatureFinderCentroided.dir/FeatureFinderCentroided.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FeatureFinderCentroided.dir/FeatureFinderCentroided.cpp.o -MF CMakeFiles/FeatureFinderCentroided.dir/FeatureFinderCentroided.cpp.o.d -o CMakeFiles/FeatureFinderCentroided.dir/FeatureFinderCentroided.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureFinderCentroided.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureFinderCentroided.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/XMLFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzMLFile.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureFinderCentroided.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:150:29: note: by 'OpenMS::FeatureFinderAlgorithm& OpenMS::FeatureFinderAlgorithm::operator=(const OpenMS::FeatureFinderAlgorithm&)' 150 | FeatureFinderAlgorithm& operator=(const FeatureFinderAlgorithm&); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureFinderCentroided.cpp:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:94:18: note: by 'OpenMS::TraceFitter& OpenMS::TraceFitter::operator=(const OpenMS::TraceFitter&)' 94 | TraceFitter& operator=(const TraceFitter& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.h:309:35: note: by 'OpenMS::FeatureFinderAlgorithmPicked& OpenMS::FeatureFinderAlgorithmPicked::operator=(const OpenMS::FeatureFinderAlgorithmPicked&)' 309 | FeatureFinderAlgorithmPicked& operator=(const FeatureFinderAlgorithmPicked&); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 68%] Linking CXX executable ../../bin/FeatureFinderCentroided cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureFinderCentroided.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/FeatureFinderCentroided.dir/link.d CMakeFiles/FeatureFinderCentroided.dir/FeatureFinderCentroided.cpp.o -o ../../bin/FeatureFinderCentroided -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 68%] Built target FeatureFinderCentroided make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/build.make src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/build.make src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 68%] Building CXX object src/topp/CMakeFiles/FeatureFinderIdentification.dir/FeatureFinderIdentification.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FeatureFinderIdentification.dir/FeatureFinderIdentification.cpp.o -MF CMakeFiles/FeatureFinderIdentification.dir/FeatureFinderIdentification.cpp.o.d -o CMakeFiles/FeatureFinderIdentification.dir/FeatureFinderIdentification.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureFinderIdentification.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureFinderIdentification.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureFinderIdentification.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.h:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.h:363:42: note: by 'OpenMS::MapAlignmentAlgorithmIdentification& OpenMS::MapAlignmentAlgorithmIdentification::operator=(const OpenMS::MapAlignmentAlgorithmIdentification&)' 363 | MapAlignmentAlgorithmIdentification& operator=(const MapAlignmentAlgorithmIdentification&); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h:46, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureFinderIdentification.cpp:41: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:159:17: note: by 'OpenMS::DIAScoring& OpenMS::DIAScoring::operator=(const OpenMS::DIAScoring&)' 159 | DIAScoring& operator=(const DIAScoring& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:43: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h:83:19: note: by 'OpenMS::SONARScoring& OpenMS::SONARScoring::operator=(const OpenMS::SONARScoring&)' 83 | SONARScoring& operator=(const SONARScoring& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:44: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:90:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 90 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:90:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:109:31: note: by 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' 109 | virtual LevMarqFitter1D & operator=(const LevMarqFitter1D & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:109:31: warning: 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:62:26: note: by 'virtual OpenMS::EmgFitter1D& OpenMS::EmgFitter1D::operator=(const OpenMS::EmgFitter1D&)' 62 | virtual EmgFitter1D& operator=(const EmgFitter1D& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned inmake[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' t D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:26: note: by 'OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:68:16: note: by 'OpenMS::EmgModel& OpenMS::EmgModel::operator=(const OpenMS::EmgModel&)' 68 | EmgModel & operator=(const EmgModel & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:70:23: note: by 'OpenMS::GaussFilter& OpenMS::GaussFilter::operator=(const OpenMS::GaussFilter&)' 70 | class OPENMS_DLLAPI GaussFilter : | ^~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:89:23: note: by 'OpenMS::MRMFeatureFinderScoring& OpenMS::MRMFeatureFinderScoring::operator=(const OpenMS::MRMFeatureFinderScoring&)' 89 | class OPENMS_DLLAPI MRMFeatureFinderScoring : | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.h:56:21: note: by 'OpenMS::FeatureFinderIdentificationAlgorithm::operator=' 56 | class OPENMS_DLLAPI FeatureFinderIdentificationAlgorithm : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 68%] Building CXX object src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/FeatureFinderIsotopeWavelet.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/FeatureFinderIsotopeWavelet.cpp.o -MF CMakeFiles/FeatureFinderIsotopeWavelet.dir/FeatureFinderIsotopeWavelet.cpp.o.d -o CMakeFiles/FeatureFinderIsotopeWavelet.dir/FeatureFinderIsotopeWavelet.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureFinderIsotopeWavelet.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureFinderIsotopeWavelet.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/XMLFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzMLFile.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureFinderIsotopeWavelet.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:150:29: note: by 'OpenMS::FeatureFinderAlgorithm& OpenMS::FeatureFinderAlgorithm::operator=(const OpenMS::FeatureFinderAlgorithm&)' 150 | FeatureFinderAlgorithm& operator=(const FeatureFinderAlgorithm&); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureFinderIsotopeWavelet.cpp:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.h:59:23: note: by 'OpenMS::FeatureFinderAlgorithmIsotopeWavelet& OpenMS::FeatureFinderAlgorithmIsotopeWavelet::operator=(const OpenMS::FeatureFinderAlgorithmIsotopeWavelet&)' 59 | class OPENMS_DLLAPI FeatureFinderAlgorithmIsotopeWavelet : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 68%] Linking CXX executable ../../bin/FeatureFinderIsotopeWavelet cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureFinderIsotopeWavelet.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/FeatureFinderIsotopeWavelet.dir/link.d CMakeFiles/FeatureFinderIsotopeWavelet.dir/FeatureFinderIsotopeWavelet.cpp.o -o ../../bin/FeatureFinderIsotopeWavelet -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 68%] Built target FeatureFinderIsotopeWavelet make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FeatureFinderMetabo.dir/build.make src/topp/CMakeFiles/FeatureFinderMetabo.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/FeatureFinderMetabo.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FeatureFinderMetabo.dir/build.make src/topp/CMakeFiles/FeatureFinderMetabo.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 68%] Linking CXX executable ../../bin/FeatureFinderIdentification cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureFinderIdentification.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/FeatureFinderIdentification.dir/link.d CMakeFiles/FeatureFinderIdentification.dir/FeatureFinderIdentification.cpp.o -o ../../bin/FeatureFinderIdentification -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 68%] Built target FeatureFinderIdentification make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FeatureFinderMRM.dir/build.make src/topp/CMakeFiles/FeatureFinderMRM.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/FeatureFinderMRM.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FeatureFinderMRM.dir/build.make src/topp/CMakeFiles/FeatureFinderMRM.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 68%] Building CXX object src/topp/CMakeFiles/FeatureFinderMRM.dir/FeatureFinderMRM.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FeatureFinderMRM.dir/FeatureFinderMRM.cpp.o -MF CMakeFiles/FeatureFinderMRM.dir/FeatureFinderMRM.cpp.o.d -o CMakeFiles/FeatureFinderMRM.dir/FeatureFinderMRM.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureFinderMRM.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureFinderMRM.cpp:41: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/XMLFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzMLFile.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureFinderMRM.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:150:29: note: by 'OpenMS::FeatureFinderAlgorithm& OpenMS::FeatureFinderAlgorithm::operator=(const OpenMS::FeatureFinderAlgorithm&)' 150 | FeatureFinderAlgorithm& operator=(const FeatureFinderAlgorithm&); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureFinderMRM.cpp:42: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.h:59:23: note: by 'OpenMS::FeatureFinderAlgorithmMRM::operator=' 59 | class OPENMS_DLLAPI FeatureFinderAlgorithmMRM : | ^~~~~~~~~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 68%] Building CXX object src/topp/CMakeFiles/FeatureFinderMetabo.dir/FeatureFinderMetabo.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FeatureFinderMetabo.dir/FeatureFinderMetabo.cpp.o -MF CMakeFiles/FeatureFinderMetabo.dir/FeatureFinderMetabo.cpp.o.d -o CMakeFiles/FeatureFinderMetabo.dir/FeatureFinderMetabo.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureFinderMetabo.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureFinderMetabo.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/XMLFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzMLFile.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureFinderMetabo.cpp:34: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/MassTraceDetection.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureFinderMetabo.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/MassTraceDetection.h:72:25: note: by 'OpenMS::MassTraceDetection& OpenMS::MassTraceDetection::operator=(const OpenMS::MassTraceDetection&)' 72 | class OPENMS_DLLAPI MassTraceDetection : | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureFinderMetabo.cpp:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/ElutionPeakDetection.h:76:23: note: by 'OpenMS::ElutionPeakDetection& OpenMS::ElutionPeakDetection::operator=(const OpenMS::ElutionPeakDetection&)' 76 | class OPENMS_DLLAPI ElutionPeakDetection : | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureFinderMetabo.cpp:41: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/FeatureFindingMetabo.h:181:23: note: by 'OpenMS::FeatureFindingMetabo& OpenMS::FeatureFindingMetabo::operator=(const OpenMS::FeatureFindingMetabo&)' 181 | class OPENMS_DLLAPI FeatureFindingMetabo : | ^~~~~~~~~~~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Linking CXX executable ../../bin/FeatureFinderMRM cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureFinderMRM.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/FeatureFinderMRM.dir/link.d CMakeFiles/FeatureFinderMRM.dir/FeatureFinderMRM.cpp.o -o ../../bin/FeatureFinderMRM -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Built target FeatureFinderMRM make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FeatureFinderMultiplex.dir/build.make src/topp/CMakeFiles/FeatureFinderMultiplex.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/FeatureFinderMultiplex.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FeatureFinderMultiplex.dir/build.make src/topp/CMakeFiles/FeatureFinderMultiplex.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Linking CXX executable ../../bin/FeatureFinderMetabo cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureFinderMetabo.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/FeatureFinderMetabo.dir/link.d CMakeFiles/FeatureFinderMetabo.dir/FeatureFinderMetabo.cpp.o -o ../../bin/FeatureFinderMetabo -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Built target FeatureFinderMetabo make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FeatureLinkerLabeled.dir/build.make src/topp/CMakeFiles/FeatureLinkerLabeled.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/FeatureLinkerLabeled.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FeatureLinkerLabeled.dir/build.make src/topp/CMakeFiles/FeatureLinkerLabeled.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Building CXX object src/topp/CMakeFiles/FeatureFinderMultiplex.dir/FeatureFinderMultiplex.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FeatureFinderMultiplex.dir/FeatureFinderMultiplex.cpp.o -MF CMakeFiles/FeatureFinderMultiplex.dir/FeatureFinderMultiplex.cpp.o.d -o CMakeFiles/FeatureFinderMultiplex.dir/FeatureFinderMultiplex.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureFinderMultiplex.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureFinderMultiplex.cpp:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureFinderMultiplex.cpp:36: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureFinderMultiplex.cpp:51: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureFinderMultiplex.cpp:59: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.h:60:23: note: by 'OpenMS::MultiplexDeltaMassesGenerator::operator=' 60 | class OPENMS_DLLAPI MultiplexDeltaMassesGenerator : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureFinderMultiplex.cpp:65: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.h:56:21: note: by 'OpenMS::FeatureFinderMultiplexAlgorithm::operator=' 56 | class OPENMS_DLLAPI FeatureFinderMultiplexAlgorithm : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Building CXX object src/topp/CMakeFiles/FeatureLinkerLabeled.dir/FeatureLinkerLabeled.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FeatureLinkerLabeled.dir/FeatureLinkerLabeled.cpp.o -MF CMakeFiles/FeatureLinkerLabeled.dir/FeatureLinkerLabeled.cpp.o.d -o CMakeFiles/FeatureLinkerLabeled.dir/FeatureLinkerLabeled.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureLinkerLabeled.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureLinkerLabeled.cpp:34: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:120:32: note: by 'OpenMS::FeatureGroupingAlgorithm& OpenMS::FeatureGroupingAlgorithm::operator=(const OpenMS::FeatureGroupingAlgorithm&)' 120 | FeatureGroupingAlgorithm & operator=(const FeatureGroupingAlgorithm &); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.h:88:39: note: by 'OpenMS::FeatureGroupingAlgorithmLabeled& OpenMS::FeatureGroupingAlgorithmLabeled::operator=(const OpenMS::FeatureGroupingAlgorithmLabeled&)' 88 | FeatureGroupingAlgorithmLabeled & operator=(const FeatureGroupingAlgorithmLabeled &); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Linking CXX executable ../../bin/FeatureFinderMultiplex cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureFinderMultiplex.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/FeatureFinderMultiplex.dir/link.d CMakeFiles/FeatureFinderMultiplex.dir/FeatureFinderMultiplex.cpp.o -o ../../bin/FeatureFinderMultiplex -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Built target FeatureFinderMultiplex make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Linking CXX executable ../../bin/FeatureLinkerLabeled cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureLinkerLabeled.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/FeatureLinkerLabeled.dir/link.d CMakeFiles/FeatureLinkerLabeled.dir/FeatureLinkerLabeled.cpp.o -o ../../bin/FeatureLinkerLabeled -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Built target FeatureLinkerLabeled make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Building CXX object src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/FeatureLinkerUnlabeledKD.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/FeatureLinkerUnlabeledKD.cpp.o -MF CMakeFiles/FeatureLinkerUnlabeledKD.dir/FeatureLinkerUnlabeledKD.cpp.o.d -o CMakeFiles/FeatureLinkerUnlabeledKD.dir/FeatureLinkerUnlabeledKD.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureLinkerUnlabeledKD.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureLinkerUnlabeledKD.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureLinkerUnlabeledKD.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureLinkerUnlabeledKD.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:120:32: note: by 'OpenMS::FeatureGroupingAlgorithm& OpenMS::FeatureGroupingAlgorithm::operator=(const OpenMS::FeatureGroupingAlgorithm&)' 120 | FeatureGroupingAlgorithm & operator=(const FeatureGroupingAlgorithm &); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.h:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:49:21: note: by 'OpenMS::KDTreeFeatureMaps& OpenMS::KDTreeFeatureMaps::operator=(const OpenMS::KDTreeFeatureMaps&)' 49 | class OPENMS_DLLAPI KDTreeFeatureMaps : public DefaultParamHandler | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.h:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureDistance.h:109:23: note: by 'OpenMS::FeatureDistance& OpenMS::FeatureDistance::operator=(const OpenMS::FeatureDistance&)' 109 | FeatureDistance & operator=(const FeatureDistance & other); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.h:224:33: note: by 'OpenMS::FeatureGroupingAlgorithmKD& OpenMS::FeatureGroupingAlgorithmKD::operator=(const OpenMS::FeatureGroupingAlgorithmKD&)' 224 | FeatureGroupingAlgorithmKD& operator=(const FeatureGroupingAlgorithmKD&); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Building CXX object src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/FeatureLinkerUnlabeled.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/FeatureLinkerUnlabeled.cpp.o -MF CMakeFiles/FeatureLinkerUnlabeled.dir/FeatureLinkerUnlabeled.cpp.o.d -o CMakeFiles/FeatureLinkerUnlabeled.dir/FeatureLinkerUnlabeled.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureLinkerUnlabeled.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureLinkerUnlabeled.cpp:34: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:120:32: note: by 'OpenMS::FeatureGroupingAlgorithm& OpenMS::FeatureGroupingAlgorithm::operator=(const OpenMS::FeatureGroupingAlgorithm&)' 120 | FeatureGroupingAlgorithm & operator=(const FeatureGroupingAlgorithm &); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.h:136:41: note: by 'OpenMS::FeatureGroupingAlgorithmUnlabeled& OpenMS::FeatureGroupingAlgorithmUnlabeled::operator=(const OpenMS::FeatureGroupingAlgorithmUnlabeled&)' 136 | FeatureGroupingAlgorithmUnlabeled & operator=(const FeatureGroupingAlgorithmUnlabeled &); | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Linking CXX executable ../../bin/FeatureLinkerUnlabeledKD cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureLinkerUnlabeledKD.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/FeatureLinkerUnlabeledKD.dir/link.d CMakeFiles/FeatureLinkerUnlabeledKD.dir/FeatureLinkerUnlabeledKD.cpp.o -o ../../bin/FeatureLinkerUnlabeledKD -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Built target FeatureLinkerUnlabeledKD make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Linking CXX executable ../../bin/FeatureLinkerUnlabeled cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureLinkerUnlabeled.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/FeatureLinkerUnlabeled.dir/link.d CMakeFiles/FeatureLinkerUnlabeled.dir/FeatureLinkerUnlabeled.cpp.o -o ../../bin/FeatureLinkerUnlabeled -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Built target FeatureLinkerUnlabeled make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FidoAdapter.dir/build.make src/topp/CMakeFiles/FidoAdapter.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/FidoAdapter.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FidoAdapter.dir/build.make src/topp/CMakeFiles/FidoAdapter.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Building CXX object src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/FeatureLinkerUnlabeledQT.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/FeatureLinkerUnlabeledQT.cpp.o -MF CMakeFiles/FeatureLinkerUnlabeledQT.dir/FeatureLinkerUnlabeledQT.cpp.o.d -o CMakeFiles/FeatureLinkerUnlabeledQT.dir/FeatureLinkerUnlabeledQT.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureLinkerUnlabeledQT.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureLinkerUnlabeledQT.cpp:34: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:120:32: note: by 'OpenMS::FeatureGroupingAlgorithm& OpenMS::FeatureGroupingAlgorithm::operator=(const OpenMS::FeatureGroupingAlgorithm&)' 120 | FeatureGroupingAlgorithm & operator=(const FeatureGroupingAlgorithm &); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.h:99:33: note: by 'OpenMS::FeatureGroupingAlgorithmQT& OpenMS::FeatureGroupingAlgorithmQT::operator=(const OpenMS::FeatureGroupingAlgorithmQT&)' 99 | FeatureGroupingAlgorithmQT& operator=(const FeatureGroupingAlgorithmQT&); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Linking CXX executable ../../bin/FeatureLinkerUnlabeledQT cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureLinkerUnlabeledQT.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/FeatureLinkerUnlabeledQT.dir/link.d CMakeFiles/FeatureLinkerUnlabeledQT.dir/FeatureLinkerUnlabeledQT.cpp.o -o ../../bin/FeatureLinkerUnlabeledQT -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Built target FeatureLinkerUnlabeledQT make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FileConverter.dir/build.make src/topp/CMakeFiles/FileConverter.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/FileConverter.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FileConverter.dir/build.make src/topp/CMakeFiles/FileConverter.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Building CXX object src/topp/CMakeFiles/FidoAdapter.dir/FidoAdapter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FidoAdapter.dir/FidoAdapter.cpp.o -MF CMakeFiles/FidoAdapter.dir/FidoAdapter.cpp.o.d -o CMakeFiles/FidoAdapter.dir/FidoAdapter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FidoAdapter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FidoAdapter.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FidoAdapter.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::FilterPeptideEvidences(EvidenceFilter&, std::vector&) [with EvidenceFilter = DigestionFilter]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:486:68: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:728:35: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::DigestionFilter]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 728 | std::not1(filter)); | ~~~~~~~~~^~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1138:24: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1147:26: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMetaValue]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:572:26: required from 'static void OpenMS::IDFilter::keepMatchingItemsUnroll(IDContainer&, const Predicate&) [with IDContainer = std::vector; Predicate = HasMetaValue]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1210:30: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMetaValue]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1358:31: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1368:35: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Linking CXX executable ../../bin/FidoAdapter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FidoAdapter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/FidoAdapter.dir/link.d CMakeFiles/FidoAdapter.dir/FidoAdapter.cpp.o -o ../../bin/FidoAdapter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Built target FidoAdapter make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FileFilter.dir/build.make src/topp/CMakeFiles/FileFilter.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/FileFilter.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FileFilter.dir/build.make src/topp/CMakeFiles/FileFilter.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Building CXX object src/topp/CMakeFiles/FileConverter.dir/FileConverter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FileConverter.dir/FileConverter.cpp.o -MF CMakeFiles/FileConverter.dir/FileConverter.cpp.o.d -o CMakeFiles/FileConverter.dir/FileConverter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FileConverter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/CachedMzML.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FileConverter.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FileConverter.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MascotGenericFile.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FileConverter.cpp:48: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MascotGenericFile.h:62:23: note: by 'OpenMS::MascotGenericFile& OpenMS::MascotGenericFile::operator=(const OpenMS::MascotGenericFile&)' 62 | class OPENMS_DLLAPI MascotGenericFile : | ^~~~~~~~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Linking CXX executable ../../bin/FileConverter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FileConverter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/FileConverter.dir/link.d CMakeFiles/FileConverter.dir/FileConverter.cpp.o -o ../../bin/FileConverter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Built target FileConverter make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FileInfo.dir/build.make src/topp/CMakeFiles/FileInfo.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/FileInfo.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FileInfo.dir/build.make src/topp/CMakeFiles/FileInfo.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Building CXX object src/topp/CMakeFiles/FileFilter.dir/FileFilter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FileFilter.dir/FileFilter.cpp.o -MF CMakeFiles/FileFilter.dir/FileFilter.cpp.o.d -o CMakeFiles/FileFilter.dir/FileFilter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FileFilter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FileFilter.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FileFilter.cpp:50: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FileFilter.cpp:51: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h:74:28: note: by 'OpenMS::ZhangSimilarityScore& OpenMS::ZhangSimilarityScore::operator=(const OpenMS::ZhangSimilarityScore&)' 74 | ZhangSimilarityScore & operator=(const ZhangSimilarityScore & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h: In instantiation of 'class OpenMS::SignalToNoiseEstimator': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:81:9: required from 'class OpenMS::SignalToNoiseEstimatorMedian' /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FileFilter.cpp:457:57: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:86:37: note: by 'OpenMS::SignalToNoiseEstimator& OpenMS::SignalToNoiseEstimator::operator=(const OpenMS::SignalToNoiseEstimator&) [with Container = OpenMS::MSSpectrum]' 86 | inline SignalToNoiseEstimator & operator=(const SignalToNoiseEstimator & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h: In instantiation of 'class OpenMS::SignalToNoiseEstimatorMedian': /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FileFilter.cpp:457:57: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:153:43: note: by 'OpenMS::SignalToNoiseEstimatorMedian& OpenMS::SignalToNoiseEstimatorMedian::operator=(const OpenMS::SignalToNoiseEstimatorMedian&) [with Container = OpenMS::MSSpectrum]' 153 | inline SignalToNoiseEstimatorMedian & operator=(const SignalToNoiseEstimatorMedian & source) | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Building CXX object src/topp/CMakeFiles/FileInfo.dir/FileInfo.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FileInfo.dir/FileInfo.cpp.o -MF CMakeFiles/FileInfo.dir/FileInfo.cpp.o.d -o CMakeFiles/FileInfo.dir/FileInfo.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FileInfo.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TransitionTSVFile.h:43, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FileInfo.cpp:42: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TransitionTSVFile.h:144:23: note: by 'OpenMS::TransitionTSVFile& OpenMS::TransitionTSVFile::operator=(const OpenMS::TransitionTSVFile&)' 144 | class OPENMS_DLLAPI TransitionTSVFile : | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FileInfo.cpp:43: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TransitionPQPFile.h:215:23: note: by 'OpenMS::TransitionPQPFile& OpenMS::TransitionPQPFile::operator=(const OpenMS::TransitionPQPFile&)' 215 | class OPENMS_DLLAPI TransitionPQPFile : | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/ConsensusXMLFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FileInfo.cpp:46: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /usr/include/c++/13/bits/locale_classes.h:40, from /usr/include/c++/13/bits/ios_base.h:41, from /usr/include/c++/13/ios:44, from /usr/include/boost/iostreams/detail/ios.hpp:20, from /usr/include/boost/iostreams/device/null.hpp:18, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FileInfo.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FileInfo.cpp:63: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/MATH/STATISTICS/StatisticFunctions.h: In instantiation of 'OpenMS::Math::SummaryStatistics::SummaryStatistics() [with T = std::vector]': /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FileInfo.cpp:1491:49: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/MATH/STATISTICS/StatisticFunctions.h:702:30: warning: 'OpenMS::Math::SummaryStatistics >::min' will be initialized after [-Wreorder] 702 | typename T::value_type min, max; | ^~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/MATH/STATISTICS/StatisticFunctions.h:701:30: warning: 'double OpenMS::Math::SummaryStatistics >::lowerq' [-Wreorder] 701 | double mean, variance, lowerq, median, upperq; | ^~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/MATH/STATISTICS/StatisticFunctions.h:674:7: warning: when initialized here [-Wreorder] 674 | SummaryStatistics() | ^~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Linking CXX executable ../../bin/FileFilter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FileFilter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/FileFilter.dir/link.d CMakeFiles/FileFilter.dir/FileFilter.cpp.o -o ../../bin/FileFilter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Built target FileFilter make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FileMerger.dir/build.make src/topp/CMakeFiles/FileMerger.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/FileMerger.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FileMerger.dir/build.make src/topp/CMakeFiles/FileMerger.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Linking CXX executable ../../bin/FileInfo cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FileInfo.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/FileInfo.dir/link.d CMakeFiles/FileInfo.dir/FileInfo.cpp.o -o ../../bin/FileInfo -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Built target FileInfo make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/GenericWrapper.dir/build.make src/topp/CMakeFiles/GenericWrapper.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/GenericWrapper.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/GenericWrapper.dir/build.make src/topp/CMakeFiles/GenericWrapper.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Building CXX object src/topp/CMakeFiles/GenericWrapper.dir/GenericWrapper.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/GenericWrapper.dir/GenericWrapper.cpp.o -MF CMakeFiles/GenericWrapper.dir/GenericWrapper.cpp.o.d -o CMakeFiles/GenericWrapper.dir/GenericWrapper.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/GenericWrapper.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /builddir/build/BUILD/OpenMS-2.8.0/src/topp/GenericWrapper.cpp: In member function 'virtual OpenMS::TOPPBase::ExitCodes TOPPGenericWrapper::main_(int, const char**)': /builddir/build/BUILD/OpenMS-2.8.0/src/topp/GenericWrapper.cpp:508:18: warning: 'void QProcess::start(const QString&, QIODevice::OpenMode)' is deprecated: Use QProcess::start(const QString &program, const QStringList &arguments,OpenMode mode = ReadWrite) instead [-Wdeprecated-declarations] 508 | builder.start(call.toQString()); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtCore/QProcess:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/GenericWrapper.cpp:47: /usr/include/qt5/QtCore/qprocess.h:168:10: note: declared here 168 | void start(const QString &command, OpenMode mode = ReadWrite); | ^~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Linking CXX executable ../../bin/GenericWrapper cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/GenericWrapper.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/GenericWrapper.dir/link.d CMakeFiles/GenericWrapper.dir/GenericWrapper.cpp.o -o ../../bin/GenericWrapper -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Built target GenericWrapper make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/GNPSExport.dir/build.make src/topp/CMakeFiles/GNPSExport.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/GNPSExport.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/GNPSExport.dir/build.make src/topp/CMakeFiles/GNPSExport.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Building CXX object src/topp/CMakeFiles/GNPSExport.dir/GNPSExport.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/GNPSExport.dir/GNPSExport.cpp.o -MF CMakeFiles/GNPSExport.dir/GNPSExport.cpp.o.d -o CMakeFiles/GNPSExport.dir/GNPSExport.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/GNPSExport.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/GNPSMGFFile.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/GNPSExport.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/GNPSMGFFile.h:43:23: note: by 'OpenMS::GNPSMGFFile::operator=' 43 | class OPENMS_DLLAPI GNPSMGFFile : | ^~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Linking CXX executable ../../bin/GNPSExport cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/GNPSExport.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/GNPSExport.dir/link.d CMakeFiles/GNPSExport.dir/GNPSExport.cpp.o -o ../../bin/GNPSExport -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Built target GNPSExport make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/build.make src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/build.make src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Building CXX object src/topp/CMakeFiles/FileMerger.dir/FileMerger.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FileMerger.dir/FileMerger.cpp.o -MF CMakeFiles/FileMerger.dir/FileMerger.cpp.o.d -o CMakeFiles/FileMerger.dir/FileMerger.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FileMerger.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FileMerger.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Building CXX object src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/HighResPrecursorMassCorrector.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/HighResPrecursorMassCorrector.cpp.o -MF CMakeFiles/HighResPrecursorMassCorrector.dir/HighResPrecursorMassCorrector.cpp.o.d -o CMakeFiles/HighResPrecursorMassCorrector.dir/HighResPrecursorMassCorrector.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/HighResPrecursorMassCorrector.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/HighResPrecursorMassCorrector.cpp:43: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/HighResPrecursorMassCorrector.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Linking CXX executable ../../bin/HighResPrecursorMassCorrector cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/HighResPrecursorMassCorrector.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/HighResPrecursorMassCorrector.dir/link.d CMakeFiles/HighResPrecursorMassCorrector.dir/HighResPrecursorMassCorrector.cpp.o -o ../../bin/HighResPrecursorMassCorrector -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Built target HighResPrecursorMassCorrector make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/IDConflictResolver.dir/build.make src/topp/CMakeFiles/IDConflictResolver.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/IDConflictResolver.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/IDConflictResolver.dir/build.make src/topp/CMakeFiles/IDConflictResolver.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Linking CXX executable ../../bin/FileMerger cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FileMerger.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/FileMerger.dir/link.d CMakeFiles/FileMerger.dir/FileMerger.cpp.o -o ../../bin/FileMerger -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so /usr/lib64/libboost_regex.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Built target FileMerger make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/IDFileConverter.dir/build.make src/topp/CMakeFiles/IDFileConverter.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/IDFileConverter.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/IDFileConverter.dir/build.make src/topp/CMakeFiles/IDFileConverter.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Building CXX object src/topp/CMakeFiles/IDConflictResolver.dir/IDConflictResolver.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/IDConflictResolver.dir/IDConflictResolver.cpp.o -MF CMakeFiles/IDConflictResolver.dir/IDConflictResolver.cpp.o.d -o CMakeFiles/IDConflictResolver.dir/IDConflictResolver.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDConflictResolver.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/ConsensusXMLFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDConflictResolver.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDConflictResolver.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Linking CXX executable ../../bin/IDConflictResolver cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDConflictResolver.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/IDConflictResolver.dir/link.d CMakeFiles/IDConflictResolver.dir/IDConflictResolver.cpp.o -o ../../bin/IDConflictResolver -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Built target IDConflictResolver make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/IDFilter.dir/build.make src/topp/CMakeFiles/IDFilter.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/IDFilter.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/IDFilter.dir/build.make src/topp/CMakeFiles/IDFilter.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Building CXX object src/topp/CMakeFiles/IDFileConverter.dir/IDFileConverter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/IDFileConverter.dir/IDFileConverter.cpp.o -MF CMakeFiles/IDFileConverter.dir/IDFileConverter.cpp.o.d -o CMakeFiles/IDFileConverter.dir/IDFileConverter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDFileConverter.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/SpectrumAnnotator.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDFileConverter.cpp:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/SpectrumAnnotator.h:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:87:35: note: by 'OpenMS::TheoreticalSpectrumGenerator& OpenMS::TheoreticalSpectrumGenerator::operator=(const OpenMS::TheoreticalSpectrumGenerator&)' 87 | TheoreticalSpectrumGenerator& operator=(const TheoreticalSpectrumGenerator& tsg); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/SpectrumAnnotator.h:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h:84:25: note: by 'OpenMS::SpectrumAlignment& OpenMS::SpectrumAlignment::operator=(const OpenMS::SpectrumAlignment&)' 84 | SpectrumAlignment & operator=(const SpectrumAlignment & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/SpectrumAnnotator.h:79:25: note: by 'OpenMS::SpectrumAnnotator& OpenMS::SpectrumAnnotator::operator=(const OpenMS::SpectrumAnnotator&)' 79 | SpectrumAnnotator & operator=(const SpectrumAnnotator & tsg); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/SpectrumMetaDataLookup.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/HANDLERS/MascotXMLHandler.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MascotXMLFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDFileConverter.cpp:45: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDFileConverter.cpp:36: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Building CXX object src/topp/CMakeFiles/IDFilter.dir/IDFilter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/IDFilter.dir/IDFilter.cpp.o -MF CMakeFiles/IDFilter.dir/IDFilter.cpp.o.d -o CMakeFiles/IDFilter.dir/IDFilter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDFilter.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/IDRipper.h:36, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDFilter.cpp:43: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/IDRipper.h:180:16: note: by 'OpenMS::IDRipper& OpenMS::IDRipper::operator=(const OpenMS::IDRipper&)' 180 | IDRipper & operator=(const IDRipper & rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/ConsensusXMLFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDFilter.cpp:44: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDFilter.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDFilter.cpp:45: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::FilterPeptideEvidences(EvidenceFilter&, std::vector&) [with EvidenceFilter = DigestionFilter]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:486:68: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:728:35: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::DigestionFilter]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 728 | std::not1(filter)); | ~~~~~~~~~^~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1138:24: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1147:26: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMetaValue]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:572:26: required from 'static void OpenMS::IDFilter::keepMatchingItemsUnroll(IDContainer&, const Predicate&) [with IDContainer = std::vector; Predicate = HasMetaValue]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1210:30: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMetaValue]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1358:31: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred))make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' , | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1368:35: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMaxRank]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:927:28: required from 'static void OpenMS::IDFilter::filterHitsByRank(std::vector&, OpenMS::Size, OpenMS::Size) [with IdentificationType = OpenMS::PeptideIdentification; OpenMS::Size = long unsigned int]' /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDFilter.cpp:620:33: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMaxRank]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Linking CXX executable ../../bin/IDFileConverter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDFileConverter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/IDFileConverter.dir/link.d CMakeFiles/IDFileConverter.dir/IDFileConverter.cpp.o -o ../../bin/IDFileConverter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Built target IDFileConverter make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/IDMapper.dir/build.make src/topp/CMakeFiles/IDMapper.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/IDMapper.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/IDMapper.dir/build.make src/topp/CMakeFiles/IDMapper.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Linking CXX executable ../../bin/IDFilter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDFilter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/IDFilter.dir/link.d CMakeFiles/IDFilter.dir/IDFilter.cpp.o -o ../../bin/IDFilter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Built target IDFilter make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/IDMerger.dir/build.make src/topp/CMakeFiles/IDMerger.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/IDMerger.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/IDMerger.dir/build.make src/topp/CMakeFiles/IDMerger.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Building CXX object src/topp/CMakeFiles/IDMapper.dir/IDMapper.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/IDMapper.dir/IDMapper.cpp.o -MF CMakeFiles/IDMapper.dir/IDMapper.cpp.o.d -o CMakeFiles/IDMapper.dir/IDMapper.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDMapper.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/ConsensusXMLFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDMapper.cpp:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ProteinHit.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ProteinIdentification.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/IdXMLFile.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDMapper.cpp:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/IDMapper.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDMapper.cpp:47: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/IDMapper.h:77:15: note: by 'OpenMS::IDMapper& OpenMS::IDMapper::operator=(const OpenMS::IDMapper&)' 77 | IDMapper& operator=(const IDMapper& rhs); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Linking CXX executable ../../bin/IDMapper cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDMapper.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/IDMapper.dir/link.d CMakeFiles/IDMapper.dir/IDMapper.cpp.o -o ../../bin/IDMapper -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Built target IDMapper make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/build.make src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/build.make src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Building CXX object src/topp/CMakeFiles/IDMerger.dir/IDMerger.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/IDMerger.dir/IDMerger.cpp.o -MF CMakeFiles/IDMerger.dir/IDMerger.cpp.o.d -o CMakeFiles/IDMerger.dir/IDMerger.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDMerger.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/IDMergerAlgorithm.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDMerger.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/IDMergerAlgorithm.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/IDMergerAlgorithm.h:61:23: note: by 'OpenMS::IDMergerAlgorithm::operator=' 61 | class OPENMS_DLLAPI IDMergerAlgorithm: | ^~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Building CXX object src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/IDPosteriorErrorProbability.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/IDPosteriorErrorProbability.cpp.o -MF CMakeFiles/IDPosteriorErrorProbability.dir/IDPosteriorErrorProbability.cpp.o.d -o CMakeFiles/IDPosteriorErrorProbability.dir/IDPosteriorErrorProbability.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDPosteriorErrorProbability.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/MATH/STATISTICS/PosteriorErrorProbabilityModel.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDPosteriorErrorProbability.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/MATH/STATISTICS/PosteriorErrorProbabilityModel.h:272:40: note: by 'OpenMS::Math::PosteriorErrorProbabilityModel& OpenMS::Math::PosteriorErrorProbabilityModel::operator=(const OpenMS::Math::PosteriorErrorProbabilityModel&)' 272 | PosteriorErrorProbabilityModel & operator=(const PosteriorErrorProbabilityModel & rhs); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Linking CXX executable ../../bin/IDPosteriorErrorProbability cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDPosteriorErrorProbability.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/IDPosteriorErrorProbability.dir/link.d CMakeFiles/IDPosteriorErrorProbability.dir/IDPosteriorErrorProbability.cpp.o -o ../../bin/IDPosteriorErrorProbability -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Built target IDPosteriorErrorProbability make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/IDRipper.dir/build.make src/topp/CMakeFiles/IDRipper.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/IDRipper.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/IDRipper.dir/build.make src/topp/CMakeFiles/IDRipper.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Linking CXX executable ../../bin/IDMerger cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDMerger.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/IDMerger.dir/link.d CMakeFiles/IDMerger.dir/IDMerger.cpp.o -o ../../bin/IDMerger -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Built target IDMerger make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/IDRTCalibration.dir/build.make src/topp/CMakeFiles/IDRTCalibration.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/IDRTCalibration.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/IDRTCalibration.dir/build.make src/topp/CMakeFiles/IDRTCalibration.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Building CXX object src/topp/CMakeFiles/IDRipper.dir/IDRipper.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/IDRipper.dir/IDRipper.cpp.o -MF CMakeFiles/IDRipper.dir/IDRipper.cpp.o.d -o CMakeFiles/IDRipper.dir/IDRipper.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDRipper.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/IDRipper.h:36, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDRipper.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/IDRipper.h:180:16: note: by 'OpenMS::IDRipper& OpenMS::IDRipper::operator=(const OpenMS::IDRipper&)' 180 | IDRipper & operator=(const IDRipper & rhs); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Linking CXX executable ../../bin/IDRipper cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDRipper.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/IDRipper.dir/link.d CMakeFiles/IDRipper.dir/IDRipper.cpp.o -o ../../bin/IDRipper -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Built target IDRipper make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/InclusionExclusionListCreator.dir/build.make src/topp/CMakeFiles/InclusionExclusionListCreator.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/InclusionExclusionListCreator.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/InclusionExclusionListCreator.dir/build.make src/topp/CMakeFiles/InclusionExclusionListCreator.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Building CXX object src/topp/CMakeFiles/IDRTCalibration.dir/IDRTCalibration.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/IDRTCalibration.dir/IDRTCalibration.cpp.o -MF CMakeFiles/IDRTCalibration.dir/IDRTCalibration.cpp.o.d -o CMakeFiles/IDRTCalibration.dir/IDRTCalibration.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDRTCalibration.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Linking CXX executable ../../bin/IDRTCalibration cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDRTCalibration.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/IDRTCalibration.dir/link.d CMakeFiles/IDRTCalibration.dir/IDRTCalibration.cpp.o -o ../../bin/IDRTCalibration -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Built target IDRTCalibration make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/InternalCalibration.dir/build.make src/topp/CMakeFiles/InternalCalibration.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/InternalCalibration.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/InternalCalibration.dir/build.make src/topp/CMakeFiles/InternalCalibration.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Building CXX object src/topp/CMakeFiles/InternalCalibration.dir/InternalCalibration.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/InternalCalibration.dir/InternalCalibration.cpp.o -MF CMakeFiles/InternalCalibration.dir/InternalCalibration.cpp.o.d -o CMakeFiles/InternalCalibration.dir/InternalCalibration.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/InternalCalibration.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/CALIBRATION/InternalCalibration.h:43, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/InternalCalibration.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/InternalCalibration.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Building CXX object src/topp/CMakeFiles/InclusionExclusionListCreator.dir/InclusionExclusionListCreator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/InclusionExclusionListCreator.dir/InclusionExclusionListCreator.cpp.o -MF CMakeFiles/InclusionExclusionListCreator.dir/InclusionExclusionListCreator.cpp.o.d -o CMakeFiles/InclusionExclusionListCreator.dir/InclusionExclusionListCreator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/InclusionExclusionListCreator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/InclusionExclusionList.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/InclusionExclusionListCreator.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/InclusionExclusionList.h:52:23: note: by 'OpenMS::InclusionExclusionList::operator=' 52 | class OPENMS_DLLAPI InclusionExclusionList : | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/InclusionExclusionListCreator.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/InclusionExclusionListCreator.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.h:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/IDMapper.h:77:15: note: by 'OpenMS::IDMapper& OpenMS::IDMapper::operator=(const OpenMS::IDMapper&)' 77 | IDMapper& operator=(const IDMapper& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.h:42: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:55:23: note: by 'OpenMS::PSLPFormulation& OpenMS::PSLPFormulation::operator=(const OpenMS::PSLPFormulation&)' 55 | class OPENMS_DLLAPI PSLPFormulation : | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.h:61:23: note: by 'OpenMS::OfflinePrecursorIonSelection& OpenMS::OfflinePrecursorIonSelection::operator=(const OpenMS::OfflinePrecursorIonSelection&)' 61 | class OPENMS_DLLAPI OfflinePrecursorIonSelection : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Linking CXX executable ../../bin/InternalCalibration cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/InternalCalibration.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/InternalCalibration.dir/link.d CMakeFiles/InternalCalibration.dir/InternalCalibration.cpp.o -o ../../bin/InternalCalibration -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Built target InternalCalibration make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/IsobaricAnalyzer.dir/build.make src/topp/CMakeFiles/IsobaricAnalyzer.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/IsobaricAnalyzer.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/IsobaricAnalyzer.dir/build.make src/topp/CMakeFiles/IsobaricAnalyzer.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Linking CXX executable ../../bin/InclusionExclusionListCreator cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/InclusionExclusionListCreator.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/InclusionExclusionListCreator.dir/link.d CMakeFiles/InclusionExclusionListCreator.dir/InclusionExclusionListCreator.cpp.o -o ../../bin/InclusionExclusionListCreator -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Built target InclusionExclusionListCreator make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/LuciphorAdapter.dir/build.make src/topp/CMakeFiles/LuciphorAdapter.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/LuciphorAdapter.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/LuciphorAdapter.dir/build.make src/topp/CMakeFiles/LuciphorAdapter.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Building CXX object src/topp/CMakeFiles/IsobaricAnalyzer.dir/IsobaricAnalyzer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/IsobaricAnalyzer.dir/IsobaricAnalyzer.cpp.o -MF CMakeFiles/IsobaricAnalyzer.dir/IsobaricAnalyzer.cpp.o.d -o CMakeFiles/IsobaricAnalyzer.dir/IsobaricAnalyzer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IsobaricAnalyzer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IsobaricAnalyzer.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:55:23: note: by 'OpenMS::IsobaricQuantitationMethod& OpenMS::IsobaricQuantitationMethod::operator=(const OpenMS::IsobaricQuantitationMethod&)' 55 | class OPENMS_DLLAPI IsobaricQuantitationMethod : | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IsobaricAnalyzer.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.h:60:38: note: by 'OpenMS::ItraqFourPlexQuantitationMethod& OpenMS::ItraqFourPlexQuantitationMethod::operator=(const OpenMS::ItraqFourPlexQuantitationMethod&)' 60 | ItraqFourPlexQuantitationMethod& operator=(const ItraqFourPlexQuantitationMethod& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IsobaricAnalyzer.cpp:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.h:62:40: note: by 'OpenMS::ItraqEightPlexQuantitationMethod& OpenMS::ItraqEightPlexQuantitationMethod::operator=(const OpenMS::ItraqEightPlexQuantitationMethod&)' 62 | ItraqEightPlexQuantitationMethod & operator=(const ItraqEightPlexQuantitationMethod& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IsobaricAnalyzer.cpp:41: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.h:62:36: note: by 'OpenMS::TMTSixPlexQuantitationMethod& OpenMS::TMTSixPlexQuantitationMethod::operator=(const OpenMS::TMTSixPlexQuantitationMethod&)' 62 | TMTSixPlexQuantitationMethod & operator=(const TMTSixPlexQuantitationMethod& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IsobaricAnalyzer.cpp:42: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.h:62:36: note: by 'OpenMS::TMTTenPlexQuantitationMethod& OpenMS::TMTTenPlexQuantitationMethod::operator=(const OpenMS::TMTTenPlexQuantitationMethod&)' 62 | TMTTenPlexQuantitationMethod & operator=(const TMTTenPlexQuantitationMethod& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IsobaricAnalyzer.cpp:43: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.h:62:39: note: by 'OpenMS::TMTElevenPlexQuantitationMethod& OpenMS::TMTElevenPlexQuantitationMethod::operator=(const OpenMS::TMTElevenPlexQuantitationMethod&)' 62 | TMTElevenPlexQuantitationMethod & operator=(const TMTElevenPlexQuantitationMethod& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IsobaricAnalyzer.cpp:44: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.h:62:40: note: by 'OpenMS::TMTSixteenPlexQuantitationMethod& OpenMS::TMTSixteenPlexQuantitationMethod::operator=(const OpenMS::TMTSixteenPlexQuantitationMethod&)' 62 | TMTSixteenPlexQuantitationMethod & operator=(const TMTSixteenPlexQuantitationMethod& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IsobaricAnalyzer.cpp:45: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IsobaricAnalyzer.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.h:84:31: note: by 'OpenMS::IsobaricChannelExtractor& OpenMS::IsobaricChannelExtractor::operator=(const OpenMS::IsobaricChannelExtractor&)' 84 | IsobaricChannelExtractor& operator=(const IsobaricChannelExtractor& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IsobaricAnalyzer.cpp:46: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantifier.h:66:25: note: by 'OpenMS::IsobaricQuantifier& OpenMS::IsobaricQuantifier::operator=(const OpenMS::IsobaricQuantifier&)' 66 | IsobaricQuantifier& operator=(const IsobaricQuantifier& rhs); | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Linking CXX executable ../../bin/IsobaricAnalyzer cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/IsobaricAnalyzer.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/IsobaricAnalyzer.dir/link.d CMakeFiles/IsobaricAnalyzer.dir/IsobaricAnalyzer.cpp.o -o ../../bin/IsobaricAnalyzer -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Built target IsobaricAnalyzer make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MapAlignerIdentification.dir/build.make src/topp/CMakeFiles/MapAlignerIdentification.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/MapAlignerIdentification.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MapAlignerIdentification.dir/build.make src/topp/CMakeFiles/MapAlignerIdentification.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Building CXX object src/topp/CMakeFiles/LuciphorAdapter.dir/LuciphorAdapter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/LuciphorAdapter.dir/LuciphorAdapter.cpp.o -MF CMakeFiles/LuciphorAdapter.dir/LuciphorAdapter.cpp.o.d -o CMakeFiles/LuciphorAdapter.dir/LuciphorAdapter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/LuciphorAdapter.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/LuciphorAdapter.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/LuciphorAdapter.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::FilterPeptideEvidences(EvidenceFilter&, std::vector&) [with EvidenceFilter = DigestionFilter]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:486:68: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:728:35: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::DigestionFilter]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 728 | std::not1(filter)); | ~~~~~~~~~^~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1138:24: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1147:26: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMetaValue]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:572:26: required from 'static void OpenMS::IDFilter::keepMatchingItemsUnroll(IDContainer&, const Predicate&) [with IDContainer = std::vector; Predicate = HasMetaValue]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1210:30: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMetaValue]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1358:31: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1368:35: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Linking CXX executable ../../bin/LuciphorAdapter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/LuciphorAdapter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/LuciphorAdapter.dir/link.d CMakeFiles/LuciphorAdapter.dir/LuciphorAdapter.cpp.o -o ../../bin/LuciphorAdapter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Built target LuciphorAdapter make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MapAlignerPoseClustering.dir/build.make src/topp/CMakeFiles/MapAlignerPoseClustering.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/MapAlignerPoseClustering.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MapAlignerPoseClustering.dir/build.make src/topp/CMakeFiles/MapAlignerPoseClustering.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Building CXX object src/topp/CMakeFiles/MapAlignerIdentification.dir/MapAlignerIdentification.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MapAlignerIdentification.dir/MapAlignerIdentification.cpp.o -MF CMakeFiles/MapAlignerIdentification.dir/MapAlignerIdentification.cpp.o.d -o CMakeFiles/MapAlignerIdentification.dir/MapAlignerIdentification.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MapAlignerIdentification.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MapAlignerIdentification.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationDescription.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.h:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.h:363:42: note: by 'OpenMS::MapAlignmentAlgorithmIdentification& OpenMS::MapAlignmentAlgorithmIdentification::operator=(const OpenMS::MapAlignmentAlgorithmIdentification&)' 363 | MapAlignmentAlgorithmIdentification& operator=(const MapAlignmentAlgorithmIdentification&); | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Building CXX object src/topp/CMakeFiles/MapAlignerPoseClustering.dir/MapAlignerPoseClustering.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MapAlignerPoseClustering.dir/MapAlignerPoseClustering.cpp.o -MF CMakeFiles/MapAlignerPoseClustering.dir/MapAlignerPoseClustering.cpp.o.d -o CMakeFiles/MapAlignerPoseClustering.dir/MapAlignerPoseClustering.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MapAlignerPoseClustering.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/StablePairFinder.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MapAlignerPoseClustering.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationDescription.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:97:23: note: by 'OpenMS::BaseGroupFinder& OpenMS::BaseGroupFinder::operator=(const OpenMS::BaseGroupFinder&)' 97 | BaseGroupFinder & operator=(const BaseGroupFinder &); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/StablePairFinder.h:109:23: note: by 'OpenMS::StablePairFinder& OpenMS::StablePairFinder::operator=(const OpenMS::StablePairFinder&)' 109 | class OPENMS_DLLAPI StablePairFinder : | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.h:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:86:23: note: by 'OpenMS::BaseSuperimposer& OpenMS::BaseSuperimposer::operator=(const OpenMS::BaseSuperimposer&)' 86 | BaseSuperimposer& operator=(const BaseSuperimposer&); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.h:66:23: note: by 'OpenMS::PoseClusteringAffineSuperimposer& OpenMS::PoseClusteringAffineSuperimposer::operator=(const OpenMS::PoseClusteringAffineSuperimposer&)' 66 | class OPENMS_DLLAPI PoseClusteringAffineSuperimposer : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.h:110:42: note: by 'OpenMS::MapAlignmentAlgorithmPoseClustering& OpenMS::MapAlignmentAlgorithmPoseClustering::operator=(const OpenMS::MapAlignmentAlgorithmPoseClustering&)' 110 | MapAlignmentAlgorithmPoseClustering& operator=(const MapAlignmentAlgorithmPoseClustering&); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/MapAlignerBase.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MapAlignerPoseClustering.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.h:363:42: note: by 'OpenMS::MapAlignmentAlgorithmIdentification& OpenMS::MapAlignmentAlgorithmIdentification::operator=(const OpenMS::MapAlignmentAlgorithmIdentification&)' 363 | MapAlignmentAlgorithmIdentification& operator=(const MapAlignmentAlgorithmIdentification&); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Linking CXX executable ../../bin/MapAlignerPoseClustering cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MapAlignerPoseClustering.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/MapAlignerPoseClustering.dir/link.d CMakeFiles/MapAlignerPoseClustering.dir/MapAlignerPoseClustering.cpp.o -o ../../bin/MapAlignerPoseClustering -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Built target MapAlignerPoseClustering make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MapAlignerSpectrum.dir/build.make src/topp/CMakeFiles/MapAlignerSpectrum.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/MapAlignerSpectrum.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MapAlignerSpectrum.dir/build.make src/topp/CMakeFiles/MapAlignerSpectrum.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Linking CXX executable ../../bin/MapAlignerIdentification cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MapAlignerIdentification.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/MapAlignerIdentification.dir/link.d CMakeFiles/MapAlignerIdentification.dir/MapAlignerIdentification.cpp.o -o ../../bin/MapAlignerIdentification -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Built target MapAlignerIdentification make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MapAlignerTreeGuided.dir/build.make src/topp/CMakeFiles/MapAlignerTreeGuided.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/MapAlignerTreeGuided.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MapAlignerTreeGuided.dir/build.make src/topp/CMakeFiles/MapAlignerTreeGuided.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Building CXX object src/topp/CMakeFiles/MapAlignerSpectrum.dir/MapAlignerSpectrum.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MapAlignerSpectrum.dir/MapAlignerSpectrum.cpp.o -MF CMakeFiles/MapAlignerSpectrum.dir/MapAlignerSpectrum.cpp.o.d -o CMakeFiles/MapAlignerSpectrum.dir/MapAlignerSpectrum.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MapAlignerSpectrum.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MapAlignerSpectrum.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.h:72:46: note: by 'OpenMS::MapAlignmentAlgorithmSpectrumAlignment& OpenMS::MapAlignmentAlgorithmSpectrumAlignment::operator=(const OpenMS::MapAlignmentAlgorithmSpectrumAlignment&)' 72 | MapAlignmentAlgorithmSpectrumAlignment & operator=(const MapAlignmentAlgorithmSpectrumAlignment &); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/MapAlignerBase.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MapAlignerSpectrum.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationDescription.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.h:363:42: note: by 'OpenMS::MapAlignmentAlgorithmIdentification& OpenMS::MapAlignmentAlgorithmIdentification::operator=(const OpenMS::MapAlignmentAlgorithmIdentification&)' 363 | MapAlignmentAlgorithmIdentification& operator=(const MapAlignmentAlgorithmIdentification&); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Building CXX object src/topp/CMakeFiles/MapAlignerTreeGuided.dir/MapAlignerTreeGuided.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MapAlignerTreeGuided.dir/MapAlignerTreeGuided.cpp.o -MF CMakeFiles/MapAlignerTreeGuided.dir/MapAlignerTreeGuided.cpp.o.d -o CMakeFiles/MapAlignerTreeGuided.dir/MapAlignerTreeGuided.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MapAlignerTreeGuided.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MapAlignerTreeGuided.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.h:363:42: note: by 'OpenMS::MapAlignmentAlgorithmIdentification& OpenMS::MapAlignmentAlgorithmIdentification::operator=(const OpenMS::MapAlignmentAlgorithmIdentification&)' 363 | MapAlignmentAlgorithmIdentification& operator=(const MapAlignmentAlgorithmIdentification&); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.h:179:38: note: by 'OpenMS::MapAlignmentAlgorithmTreeGuided& OpenMS::MapAlignmentAlgorithmTreeGuided::operator=(const OpenMS::MapAlignmentAlgorithmTreeGuided&)' 179 | MapAlignmentAlgorithmTreeGuided& operator=(const MapAlignmentAlgorithmTreeGuided&); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Linking CXX executable ../../bin/MapAlignerSpectrum cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MapAlignerSpectrum.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/MapAlignerSpectrum.dir/link.d CMakeFiles/MapAlignerSpectrum.dir/MapAlignerSpectrum.cpp.o -o ../../bin/MapAlignerSpectrum -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Built target MapAlignerSpectrum make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MapNormalizer.dir/build.make src/topp/CMakeFiles/MapNormalizer.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/MapNormalizer.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MapNormalizer.dir/build.make src/topp/CMakeFiles/MapNormalizer.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Linking CXX executable ../../bin/MapAlignerTreeGuided cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MapAlignerTreeGuided.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/MapAlignerTreeGuided.dir/link.d CMakeFiles/MapAlignerTreeGuided.dir/MapAlignerTreeGuided.cpp.o -o ../../bin/MapAlignerTreeGuided -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Built target MapAlignerTreeGuided make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MapRTTransformer.dir/build.make src/topp/CMakeFiles/MapRTTransformer.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/MapRTTransformer.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MapRTTransformer.dir/build.make src/topp/CMakeFiles/MapRTTransformer.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Building CXX object src/topp/CMakeFiles/MapNormalizer.dir/MapNormalizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MapNormalizer.dir/MapNormalizer.cpp.o -MF CMakeFiles/MapNormalizer.dir/MapNormalizer.cpp.o.d -o CMakeFiles/MapNormalizer.dir/MapNormalizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MapNormalizer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MapNormalizer.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/XMLFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzMLFile.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MapNormalizer.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Linking CXX executable ../../bin/MapNormalizer cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MapNormalizer.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/MapNormalizer.dir/link.d CMakeFiles/MapNormalizer.dir/MapNormalizer.cpp.o -o ../../bin/MapNormalizer -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Built target MapNormalizer make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MapStatistics.dir/build.make src/topp/CMakeFiles/MapStatistics.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/MapStatistics.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MapStatistics.dir/build.make src/topp/CMakeFiles/MapStatistics.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Building CXX object src/topp/CMakeFiles/MapRTTransformer.dir/MapRTTransformer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MapRTTransformer.dir/MapRTTransformer.cpp.o -MF CMakeFiles/MapRTTransformer.dir/MapRTTransformer.cpp.o.d -o CMakeFiles/MapRTTransformer.dir/MapRTTransformer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MapRTTransformer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/MapAlignerBase.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MapRTTransformer.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/FileTypes.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/FileHandler.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/MapAlignerBase.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.h:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.h:363:42: note: by 'OpenMS::MapAlignmentAlgorithmIdentification& OpenMS::MapAlignmentAlgorithmIdentification::operator=(const OpenMS::MapAlignmentAlgorithmIdentification&)' 363 | MapAlignmentAlgorithmIdentification& operator=(const MapAlignmentAlgorithmIdentification&); | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Linking CXX executable ../../bin/MapRTTransformer cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MapRTTransformer.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/MapRTTransformer.dir/link.d CMakeFiles/MapRTTransformer.dir/MapRTTransformer.cpp.o -o ../../bin/MapRTTransformer -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Built target MapRTTransformer make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MaRaClusterAdapter.dir/build.make src/topp/CMakeFiles/MaRaClusterAdapter.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/MaRaClusterAdapter.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MaRaClusterAdapter.dir/build.make src/topp/CMakeFiles/MaRaClusterAdapter.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Building CXX object src/topp/CMakeFiles/MapStatistics.dir/MapStatistics.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MapStatistics.dir/MapStatistics.cpp.o -MF CMakeFiles/MapStatistics.dir/MapStatistics.cpp.o.d -o CMakeFiles/MapStatistics.dir/MapStatistics.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MapStatistics.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/ConsensusXMLFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MapStatistics.cpp:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/FileTypes.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/FileHandler.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MapStatistics.cpp:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Linking CXX executable ../../bin/MapStatistics cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MapStatistics.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/MapStatistics.dir/link.d CMakeFiles/MapStatistics.dir/MapStatistics.cpp.o -o ../../bin/MapStatistics -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Built target MapStatistics make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MascotAdapter.dir/build.make src/topp/CMakeFiles/MascotAdapter.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/MascotAdapter.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MascotAdapter.dir/build.make src/topp/CMakeFiles/MascotAdapter.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Building CXX object src/topp/CMakeFiles/MaRaClusterAdapter.dir/MaRaClusterAdapter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MaRaClusterAdapter.dir/MaRaClusterAdapter.cpp.o -MF CMakeFiles/MaRaClusterAdapter.dir/MaRaClusterAdapter.cpp.o.d -o CMakeFiles/MaRaClusterAdapter.dir/MaRaClusterAdapter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MaRaClusterAdapter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MaRaClusterAdapter.cpp:44: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MaRaClusterAdapter.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Linking CXX executable ../../bin/MaRaClusterAdapter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MaRaClusterAdapter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/MaRaClusterAdapter.dir/link.d CMakeFiles/MaRaClusterAdapter.dir/MaRaClusterAdapter.cpp.o -o ../../bin/MaRaClusterAdapter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Built target MaRaClusterAdapter make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MascotAdapterOnline.dir/build.make src/topp/CMakeFiles/MascotAdapterOnline.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/MascotAdapterOnline.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MascotAdapterOnline.dir/build.make src/topp/CMakeFiles/MascotAdapterOnline.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Building CXX object src/topp/CMakeFiles/MascotAdapter.dir/MascotAdapter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MascotAdapter.dir/MascotAdapter.cpp.o -MF CMakeFiles/MascotAdapter.dir/MascotAdapter.cpp.o.d -o CMakeFiles/MascotAdapter.dir/MascotAdapter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MascotAdapter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzDataFile.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MascotAdapter.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MascotAdapter.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MascotAdapter.cpp: In member function 'virtual OpenMS::TOPPBase::ExitCodes TOPPMascotAdapter::main_(int, const char**)': /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MascotAdapter.cpp:563:28: warning: 'static int QProcess::execute(const QString&)' is deprecated: Use QProcess::execute(const QString &program, const QStringList &arguments) instead [-Wdeprecated-declarations] 563 | status = qp.execute(call.toQString()); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtCore/QProcess:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MascotAdapter.cpp:53: /usr/include/qt5/QtCore/qprocess.h:265:16: note: declared here 265 | static int execute(const QString &command); | ^~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MascotAdapter.cpp:42: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::FilterPeptideEvidences(EvidenceFilter&, std::vector&) [with EvidenceFilter = DigestionFilter]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:486:68: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:728:35: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::DigestionFilter]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 728 | std::not1(filter)); | ~~~~~~~~~^~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1138:24: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1147:26: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMetaValue]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:572:26: required from 'static void OpenMS::IDFilter::keepMatchingItemsUnroll(IDContainer&, const Predicate&) [with IDContainer = std::vector; Predicate = HasMetaValue]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1210:30: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMetaValue]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1358:31: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1368:35: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Linking CXX executable ../../bin/MascotAdapter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MascotAdapter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/MascotAdapter.dir/link.d CMakeFiles/MascotAdapter.dir/MascotAdapter.cpp.o -o ../../bin/MascotAdapter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Built target MascotAdapter make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MassTraceExtractor.dir/build.make src/topp/CMakeFiles/MassTraceExtractor.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/MassTraceExtractor.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MassTraceExtractor.dir/build.make src/topp/CMakeFiles/MassTraceExtractor.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Building CXX object src/topp/CMakeFiles/MascotAdapterOnline.dir/MascotAdapterOnline.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MascotAdapterOnline.dir/MascotAdapterOnline.cpp.o -MF CMakeFiles/MascotAdapterOnline.dir/MascotAdapterOnline.cpp.o.d -o CMakeFiles/MascotAdapterOnline.dir/MascotAdapterOnline.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MascotAdapterOnline.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/SpectrumMetaDataLookup.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/HANDLERS/MascotXMLHandler.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MascotXMLFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MascotAdapterOnline.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MascotAdapterOnline.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MascotAdapterOnline.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MascotRemoteQuery.h:139:38: note: by 'OpenMS::MascotRemoteQuery& OpenMS::MascotRemoteQuery::operator=(const OpenMS::MascotRemoteQuery&)' 139 | OPENMS_DLLAPI MascotRemoteQuery& operator=(const MascotRemoteQuery& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MascotAdapterOnline.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MascotGenericFile.h:62:23: note: by 'OpenMS::MascotGenericFile& OpenMS::MascotGenericFile::operator=(const OpenMS::MascotGenericFile&)' 62 | class OPENMS_DLLAPI MascotGenericFile : | ^~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Linking CXX executable ../../bin/MascotAdapterOnline cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MascotAdapterOnline.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/MascotAdapterOnline.dir/link.d CMakeFiles/MascotAdapterOnline.dir/MascotAdapterOnline.cpp.o -o ../../bin/MascotAdapterOnline -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Built target MascotAdapterOnline make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MRMMapper.dir/build.make src/topp/CMakeFiles/MRMMapper.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/MRMMapper.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MRMMapper.dir/build.make src/topp/CMakeFiles/MRMMapper.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Building CXX object src/topp/CMakeFiles/MassTraceExtractor.dir/MassTraceExtractor.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MassTraceExtractor.dir/MassTraceExtractor.cpp.o -MF CMakeFiles/MassTraceExtractor.dir/MassTraceExtractor.cpp.o.d -o CMakeFiles/MassTraceExtractor.dir/MassTraceExtractor.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MassTraceExtractor.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MassTrace.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/MassTraceDetection.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MassTraceExtractor.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MassTraceExtractor.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/MassTraceDetection.h:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/MassTraceDetection.h:72:25: note: by 'OpenMS::MassTraceDetection& OpenMS::MassTraceDetection::operator=(const OpenMS::MassTraceDetection&)' 72 | class OPENMS_DLLAPI MassTraceDetection : | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MassTraceExtractor.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/ElutionPeakDetection.h:76:23: note: by 'OpenMS::ElutionPeakDetection& OpenMS::ElutionPeakDetection::operator=(const OpenMS::ElutionPeakDetection&)' 76 | class OPENMS_DLLAPI ElutionPeakDetection : | ^~~~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 74%] Building CXX object src/topp/CMakeFiles/MRMMapper.dir/MRMMapper.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MRMMapper.dir/MRMMapper.cpp.o -MF CMakeFiles/MRMMapper.dir/MRMMapper.cpp.o.d -o CMakeFiles/MRMMapper.dir/MRMMapper.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MRMMapper.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/MRMMapping.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MRMMapper.cpp:41: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MRMMapper.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/MRMMapping.h:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/MRMMapping.h:95:18: note: by 'OpenMS::MRMMapping& OpenMS::MRMMapping::operator=(const OpenMS::MRMMapping&)' 95 | MRMMapping & operator=(const MRMMapping & rhs); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 74%] Linking CXX executable ../../bin/MassTraceExtractor cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MassTraceExtractor.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/MassTraceExtractor.dir/link.d CMakeFiles/MassTraceExtractor.dir/MassTraceExtractor.cpp.o -o ../../bin/MassTraceExtractor -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 74%] Built target MassTraceExtractor make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MSGFPlusAdapter.dir/build.make src/topp/CMakeFiles/MSGFPlusAdapter.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/MSGFPlusAdapter.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MSGFPlusAdapter.dir/build.make src/topp/CMakeFiles/MSGFPlusAdapter.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 74%] Linking CXX executable ../../bin/MRMMapper cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MRMMapper.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/MRMMapper.dir/link.d CMakeFiles/MRMMapper.dir/MRMMapper.cpp.o -o ../../bin/MRMMapper -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 74%] Built target MRMMapper make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MyriMatchAdapter.dir/build.make src/topp/CMakeFiles/MyriMatchAdapter.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/MyriMatchAdapter.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MyriMatchAdapter.dir/build.make src/topp/CMakeFiles/MyriMatchAdapter.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 74%] Building CXX object src/topp/CMakeFiles/MyriMatchAdapter.dir/MyriMatchAdapter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MyriMatchAdapter.dir/MyriMatchAdapter.cpp.o -MF CMakeFiles/MyriMatchAdapter.dir/MyriMatchAdapter.cpp.o.d -o CMakeFiles/MyriMatchAdapter.dir/MyriMatchAdapter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MyriMatchAdapter.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/SpectrumMetaDataLookup.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/PepXMLFile.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MyriMatchAdapter.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/XMLFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzMLFile.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MyriMatchAdapter.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 74%] Building CXX object src/topp/CMakeFiles/MSGFPlusAdapter.dir/MSGFPlusAdapter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MSGFPlusAdapter.dir/MSGFPlusAdapter.cpp.o -MF CMakeFiles/MSGFPlusAdapter.dir/MSGFPlusAdapter.cpp.o.d -o CMakeFiles/MSGFPlusAdapter.dir/MSGFPlusAdapter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MSGFPlusAdapter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/PeptideIndexing.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MSGFPlusAdapter.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/PeptideIndexing.h:113:22: note: by 'OpenMS::PeptideIndexing& OpenMS::PeptideIndexing::operator=(const OpenMS::PeptideIndexing&)' 113 | class OPENMS_DLLAPI PeptideIndexing : | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/SpectrumMetaDataLookup.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MSGFPlusAdapter.cpp:47: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ProteinHit.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ProteinIdentification.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/SearchEngineBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MSGFPlusAdapter.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 74%] Linking CXX executable ../../bin/MyriMatchAdapter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MyriMatchAdapter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/MyriMatchAdapter.dir/link.d CMakeFiles/MyriMatchAdapter.dir/MyriMatchAdapter.cpp.o -o ../../bin/MyriMatchAdapter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 74%] Built target MyriMatchAdapter make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MzTabExporter.dir/build.make src/topp/CMakeFiles/MzTabExporter.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/MzTabExporter.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MzTabExporter.dir/build.make src/topp/CMakeFiles/MzTabExporter.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 74%] Linking CXX executable ../../bin/MSGFPlusAdapter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MSGFPlusAdapter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/MSGFPlusAdapter.dir/link.d CMakeFiles/MSGFPlusAdapter.dir/MSGFPlusAdapter.cpp.o -o ../../bin/MSGFPlusAdapter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 74%] Built target MSGFPlusAdapter make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/NoiseFilterGaussian.dir/build.make src/topp/CMakeFiles/NoiseFilterGaussian.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/NoiseFilterGaussian.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/NoiseFilterGaussian.dir/build.make src/topp/CMakeFiles/NoiseFilterGaussian.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 74%] Building CXX object src/topp/CMakeFiles/NoiseFilterGaussian.dir/NoiseFilterGaussian.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/NoiseFilterGaussian.dir/NoiseFilterGaussian.cpp.o -MF CMakeFiles/NoiseFilterGaussian.dir/NoiseFilterGaussian.cpp.o.d -o CMakeFiles/NoiseFilterGaussian.dir/NoiseFilterGaussian.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/NoiseFilterGaussian.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/NoiseFilterGaussian.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/LogStream.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/NoiseFilterGaussian.cpp:36: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/NoiseFilterGaussian.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:70:23: note: by 'OpenMS::GaussFilter& OpenMS::GaussFilter::operator=(const OpenMS::GaussFilter&)' 70 | class OPENMS_DLLAPI GaussFilter : | ^~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 74%] Linking CXX executable ../../bin/NoiseFilterGaussian cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/NoiseFilterGaussian.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/NoiseFilterGaussian.dir/link.d CMakeFiles/NoiseFilterGaussian.dir/NoiseFilterGaussian.cpp.o -o ../../bin/NoiseFilterGaussian -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 74%] Built target NoiseFilterGaussian make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/NoiseFilterSGolay.dir/build.make src/topp/CMakeFiles/NoiseFilterSGolay.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/NoiseFilterSGolay.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/NoiseFilterSGolay.dir/build.make src/topp/CMakeFiles/NoiseFilterSGolay.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 74%] Building CXX object src/topp/CMakeFiles/MzTabExporter.dir/MzTabExporter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MzTabExporter.dir/MzTabExporter.cpp.o -MF CMakeFiles/MzTabExporter.dir/MzTabExporter.cpp.o.d -o CMakeFiles/MzTabExporter.dir/MzTabExporter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MzTabExporter.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MzTabExporter.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MzTabExporter.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 74%] Building CXX object src/topp/CMakeFiles/NoiseFilterSGolay.dir/NoiseFilterSGolay.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/NoiseFilterSGolay.dir/NoiseFilterSGolay.cpp.o -MF CMakeFiles/NoiseFilterSGolay.dir/NoiseFilterSGolay.cpp.o.d -o CMakeFiles/NoiseFilterSGolay.dir/NoiseFilterSGolay.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/NoiseFilterSGolay.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/NoiseFilterSGolay.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/NoiseFilterSGolay.cpp:36: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:101:23: note: by 'OpenMS::SavitzkyGolayFilter& OpenMS::SavitzkyGolayFilter::operator=(const OpenMS::SavitzkyGolayFilter&)' 101 | class OPENMS_DLLAPI SavitzkyGolayFilter : | ^~~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Linking CXX executable ../../bin/NoiseFilterSGolay cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/NoiseFilterSGolay.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/NoiseFilterSGolay.dir/link.d CMakeFiles/NoiseFilterSGolay.dir/NoiseFilterSGolay.cpp.o -o ../../bin/NoiseFilterSGolay -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Built target NoiseFilterSGolay make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/OMSSAAdapter.dir/build.make src/topp/CMakeFiles/OMSSAAdapter.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/OMSSAAdapter.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/OMSSAAdapter.dir/build.make src/topp/CMakeFiles/OMSSAAdapter.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Linking CXX executable ../../bin/MzTabExporter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MzTabExporter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/MzTabExporter.dir/link.d CMakeFiles/MzTabExporter.dir/MzTabExporter.cpp.o -o ../../bin/MzTabExporter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Built target MzTabExporter make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/OpenPepXL.dir/build.make src/topp/CMakeFiles/OpenPepXL.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/OpenPepXL.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/OpenPepXL.dir/build.make src/topp/CMakeFiles/OpenPepXL.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Building CXX object src/topp/CMakeFiles/OpenPepXL.dir/OpenPepXL.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/OpenPepXL.dir/OpenPepXL.cpp.o -MF CMakeFiles/OpenPepXL.dir/OpenPepXL.cpp.o.d -o CMakeFiles/OpenPepXL.dir/OpenPepXL.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenPepXL.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/XLMS/OpenPepXLAlgorithm.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenPepXL.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenPepXL.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/XLMS/OpenPepXLAlgorithm.h:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/XLMS/OpenPepXLAlgorithm.h:113:23: note: by 'OpenMS::OpenPepXLAlgorithm& OpenMS::OpenPepXLAlgorithm::operator=(const OpenMS::OpenPepXLAlgorithm&)' 113 | class OPENMS_DLLAPI OpenPepXLAlgorithm : | ^~~~~~~~~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Building CXX object src/topp/CMakeFiles/OMSSAAdapter.dir/OMSSAAdapter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/OMSSAAdapter.dir/OMSSAAdapter.cpp.o -MF CMakeFiles/OMSSAAdapter.dir/OMSSAAdapter.cpp.o.d -o CMakeFiles/OMSSAAdapter.dir/OMSSAAdapter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OMSSAAdapter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OMSSAAdapter.cpp:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OMSSAAdapter.cpp:46: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MascotGenericFile.h:62:23: note: by 'OpenMS::MascotGenericFile& OpenMS::MascotGenericFile::operator=(const OpenMS::MascotGenericFile&)' 62 | class OPENMS_DLLAPI MascotGenericFile : | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OMSSAAdapter.cpp:50: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ProteinHit.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ProteinIdentification.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/SearchEngineBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OMSSAAdapter.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Linking CXX executable ../../bin/OpenPepXL cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenPepXL.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/OpenPepXL.dir/link.d CMakeFiles/OpenPepXL.dir/OpenPepXL.cpp.o -o ../../bin/OpenPepXL -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Built target OpenPepXL make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/OpenPepXLLF.dir/build.make src/topp/CMakeFiles/OpenPepXLLF.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/OpenPepXLLF.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/OpenPepXLLF.dir/build.make src/topp/CMakeFiles/OpenPepXLLF.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Linking CXX executable ../../bin/OMSSAAdapter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/OMSSAAdapter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/OMSSAAdapter.dir/link.d CMakeFiles/OMSSAAdapter.dir/OMSSAAdapter.cpp.o -o ../../bin/OMSSAAdapter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Built target OMSSAAdapter make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/OpenSwathAnalyzer.dir/build.make src/topp/CMakeFiles/OpenSwathAnalyzer.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/OpenSwathAnalyzer.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/OpenSwathAnalyzer.dir/build.make src/topp/CMakeFiles/OpenSwathAnalyzer.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Building CXX object src/topp/CMakeFiles/OpenPepXLLF.dir/OpenPepXLLF.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/OpenPepXLLF.dir/OpenPepXLLF.cpp.o -MF CMakeFiles/OpenPepXLLF.dir/OpenPepXLLF.cpp.o.d -o CMakeFiles/OpenPepXLLF.dir/OpenPepXLLF.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenPepXLLF.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenPepXLLF.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenPepXLLF.cpp:36: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.h:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.h:103:23: note: by 'OpenMS::OpenPepXLLFAlgorithm& OpenMS::OpenPepXLLFAlgorithm::operator=(const OpenMS::OpenPepXLLFAlgorithm&)' 103 | class OPENMS_DLLAPI OpenPepXLLFAlgorithm : | ^~~~~~~~~~~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Linking CXX executable ../../bin/OpenPepXLLF cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenPepXLLF.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/OpenPepXLLF.dir/link.d CMakeFiles/OpenPepXLLF.dir/OpenPepXLLF.cpp.o -o ../../bin/OpenPepXLLF -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Built target OpenPepXLLF make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/build.make src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/build.make src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Building CXX object src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/OpenSwathAssayGenerator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/OpenSwathAssayGenerator.cpp.o -MF CMakeFiles/OpenSwathAssayGenerator.dir/OpenSwathAssayGenerator.cpp.o.d -o CMakeFiles/OpenSwathAssayGenerator.dir/OpenSwathAssayGenerator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenSwathAssayGenerator.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TransitionTSVFile.h:43, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenSwathAssayGenerator.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TransitionTSVFile.h:144:23: note: by 'OpenMS::TransitionTSVFile& OpenMS::TransitionTSVFile::operator=(const OpenMS::TransitionTSVFile&)' 144 | class OPENMS_DLLAPI TransitionTSVFile : | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenSwathAssayGenerator.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TransitionPQPFile.h:215:23: note: by 'OpenMS::TransitionPQPFile& OpenMS::TransitionPQPFile::operator=(const OpenMS::TransitionPQPFile&)' 215 | class OPENMS_DLLAPI TransitionPQPFile : | ^~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Building CXX object src/topp/CMakeFiles/OpenSwathAnalyzer.dir/OpenSwathAnalyzer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/OpenSwathAnalyzer.dir/OpenSwathAnalyzer.cpp.o -MF CMakeFiles/OpenSwathAnalyzer.dir/OpenSwathAnalyzer.cpp.o.d -o CMakeFiles/OpenSwathAnalyzer.dir/OpenSwathAnalyzer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenSwathAnalyzer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h:46, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenSwathAnalyzer.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:159:17: note: by 'OpenMS::DIAScoring& OpenMS::DIAScoring::operator=(const OpenMS::DIAScoring&)' 159 | DIAScoring& operator=(const DIAScoring& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:43: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h:83:19: note: by 'OpenMS::SONARScoring& OpenMS::SONARScoring::operator=(const OpenMS::SONARScoring&)' 83 | SONARScoring& operator=(const SONARScoring& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:44: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:90:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 90 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:90:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:109:31: note: by 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' 109 | virtual LevMarqFitter1D & operator=(const LevMarqFitter1D & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:109:31: warning: 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:62:26: note: by 'virtual OpenMS::EmgFitter1D& OpenMS::EmgFitter1D::operator=(const OpenMS::EmgFitter1D&)' 62 | virtual EmgFitter1D& operator=(const EmgFitter1D& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:26: note: by 'OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:68:16: note: by 'OpenMS::EmgModel& OpenMS::EmgModel::operator=(const OpenMS::EmgModel&)' 68 | EmgModel & operator=(const EmgModel & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:70:23: note: by 'OpenMS::GaussFilter& OpenMS::GaussFilter::operator=(const OpenMS::GaussFilter&)' 70 | class OPENMS_DLLAPI GaussFilter : | ^~~~~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:49: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:89:23: note: by 'OpenMS::MRMFeatureFinderScoring& OpenMS::MRMFeatureFinderScoring::operator=(const OpenMS::MRMFeatureFinderScoring&)' 89 | class OPENMS_DLLAPI MRMFeatureFinderScoring : | ^~~~~~~~~~~~~~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Linking CXX executable ../../bin/OpenSwathAssayGenerator cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathAssayGenerator.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/OpenSwathAssayGenerator.dir/link.d CMakeFiles/OpenSwathAssayGenerator.dir/OpenSwathAssayGenerator.cpp.o -o ../../bin/OpenSwathAssayGenerator -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Built target OpenSwathAssayGenerator make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/build.make src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/build.make src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Linking CXX executable ../../bin/OpenSwathAnalyzer cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathAnalyzer.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/OpenSwathAnalyzer.dir/link.d CMakeFiles/OpenSwathAnalyzer.dir/OpenSwathAnalyzer.cpp.o -o ../../bin/OpenSwathAnalyzer -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Built target OpenSwathAnalyzer make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/build.make src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/build.make src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Building CXX object src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/OpenSwathConfidenceScoring.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/OpenSwathConfidenceScoring.cpp.o -MF CMakeFiles/OpenSwathConfidenceScoring.dir/OpenSwathConfidenceScoring.cpp.o.d -o CMakeFiles/OpenSwathConfidenceScoring.dir/OpenSwathConfidenceScoring.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenSwathConfidenceScoring.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ConfidenceScoring.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenSwathConfidenceScoring.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/specfun.h:43, from /usr/include/c++/13/cmath:3699, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ConfidenceScoring.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Linking CXX executable ../../bin/OpenSwathConfidenceScoring cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathConfidenceScoring.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/OpenSwathConfidenceScoring.dir/link.d CMakeFiles/OpenSwathConfidenceScoring.dir/OpenSwathConfidenceScoring.cpp.o -o ../../bin/OpenSwathConfidenceScoring -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Built target OpenSwathConfidenceScoring make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/build.make src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/build.make src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Building CXX object src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/OpenSwathChromatogramExtractor.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/OpenSwathChromatogramExtractor.cpp.o -MF CMakeFiles/OpenSwathChromatogramExtractor.dir/OpenSwathChromatogramExtractor.cpp.o.d -o CMakeFiles/OpenSwathChromatogramExtractor.dir/OpenSwathChromatogramExtractor.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenSwathChromatogramExtractor.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ChromatogramExtractor.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenSwathChromatogramExtractor.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ChromatogramExtractorAlgorithm.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ChromatogramExtractor.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h:46, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathHelper.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ChromatogramExtractor.h:44: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:159:17: note: by 'OpenMS::DIAScoring& OpenMS::DIAScoring::operator=(const OpenMS::DIAScoring&)' 159 | DIAScoring& operator=(const DIAScoring& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:43: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h:83:19: note: by 'OpenMS::SONARScoring& OpenMS::SONARScoring::operator=(const OpenMS::SONARScoring&)' 83 | SONARScoring& operator=(const SONARScoring& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:44: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:90:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 90 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:90:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:109:31: note: by 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' 109 | virtual LevMarqFitter1D & operator=(const LevMarqFitter1D & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:109:31: warning: 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:62:26: note: by 'virtual OpenMS::EmgFitter1D& OpenMS::EmgFitter1D::operator=(const OpenMS::EmgFitter1D&)' 62 | virtual EmgFitter1D& operator=(const EmgFitter1D& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:26: note: by 'OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:68:16: note: by 'OpenMS::EmgModel& OpenMS::EmgModel::operator=(const OpenMS::EmgModel&)' 68 | EmgModel & operator=(const EmgModel & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:70:23: note: by 'OpenMS::GaussFilter& OpenMS::GaussFilter::operator=(const OpenMS::GaussFilter&)' 70 | class OPENMS_DLLAPI GaussFilter : | ^~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:89:23: note: by 'OpenMS::MRMFeatureFinderScoring& OpenMS::MRMFeatureFinderScoring::operator=(const OpenMS::MRMFeatureFinderScoring&)' 89 | class OPENMS_DLLAPI MRMFeatureFinderScoring : | ^~~~~~~~~~~~~~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Linking CXX executable ../../bin/OpenSwathChromatogramExtractor cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathChromatogramExtractor.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/OpenSwathChromatogramExtractor.dir/link.d CMakeFiles/OpenSwathChromatogramExtractor.dir/OpenSwathChromatogramExtractor.cpp.o -o ../../bin/OpenSwathChromatogramExtractor -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Built target OpenSwathChromatogramExtractor make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/build.make src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/build.make src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Building CXX object src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/OpenSwathDecoyGenerator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/OpenSwathDecoyGenerator.cpp.o -MF CMakeFiles/OpenSwathDecoyGenerator.dir/OpenSwathDecoyGenerator.cpp.o.d -o CMakeFiles/OpenSwathDecoyGenerator.dir/OpenSwathDecoyGenerator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenSwathDecoyGenerator.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMDecoy.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenSwathDecoyGenerator.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMDecoy.h:81:23: note: by 'OpenMS::MRMDecoy::operator=' 81 | class OPENMS_DLLAPI MRMDecoy : | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenSwathDecoyGenerator.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TransitionTSVFile.h:144:23: note: by 'OpenMS::TransitionTSVFile& OpenMS::TransitionTSVFile::operator=(const OpenMS::TransitionTSVFile&)' 144 | class OPENMS_DLLAPI TransitionTSVFile : | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenSwathDecoyGenerator.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TransitionPQPFile.h:215:23: note: by 'OpenMS::TransitionPQPFile& OpenMS::TransitionPQPFile::operator=(const OpenMS::TransitionPQPFile&)' 215 | class OPENMS_DLLAPI TransitionPQPFile : | ^~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Linking CXX executable ../../bin/OpenSwathDecoyGenerator cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathDecoyGenerator.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/OpenSwathDecoyGenerator.dir/link.d CMakeFiles/OpenSwathDecoyGenerator.dir/OpenSwathDecoyGenerator.cpp.o -o ../../bin/OpenSwathDecoyGenerator -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Built target OpenSwathDecoyGenerator make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/build.make src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/build.make src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Building CXX object src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/OpenSwathFeatureXMLToTSV.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/OpenSwathFeatureXMLToTSV.cpp.o -MF CMakeFiles/OpenSwathFeatureXMLToTSV.dir/OpenSwathFeatureXMLToTSV.cpp.o.d -o CMakeFiles/OpenSwathFeatureXMLToTSV.dir/OpenSwathFeatureXMLToTSV.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenSwathFeatureXMLToTSV.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenSwathFeatureXMLToTSV.cpp:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenSwathFeatureXMLToTSV.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Building CXX object src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/OpenSwathRTNormalizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/OpenSwathRTNormalizer.cpp.o -MF CMakeFiles/OpenSwathRTNormalizer.dir/OpenSwathRTNormalizer.cpp.o.d -o CMakeFiles/OpenSwathRTNormalizer.dir/OpenSwathRTNormalizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenSwathRTNormalizer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h:46, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenSwathRTNormalizer.cpp:41: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:159:17: note: by 'OpenMS::DIAScoring& OpenMS::DIAScoring::operator=(const OpenMS::DIAScoring&)' 159 | DIAScoring& operator=(const DIAScoring& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:43: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h:83:19: note: by 'OpenMS::SONARScoring& OpenMS::SONARScoring::operator=(const OpenMS::SONARScoring&)' 83 | SONARScoring& operator=(const SONARScoring& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:44: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:90:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 90 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:90:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:109:31: note: by 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' 109 | virtual LevMarqFitter1D & operator=(const LevMarqFitter1D & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:109:31: warning: 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:62:26: note: by 'virtual OpenMS::EmgFitter1D& OpenMS::EmgFitter1D::operator=(const OpenMS::EmgFitter1D&)' 62 | virtual EmgFitter1D& operator=(const EmgFitter1D& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:26: note: by 'OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:68:16: note: by 'OpenMS::EmgModel& OpenMS::EmgModel::operator=(const OpenMS::EmgModel&)' 68 | EmgModel & operator=(const EmgModel & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:70:23: note: by 'OpenMS::GaussFilter& OpenMS::GaussFilter::operator=(const OpenMS::GaussFilter&)' 70 | class OPENMS_DLLAPI GaussFilter : | ^~~~~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:49: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenSwathRTNormalizer.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:89:23: note: by 'OpenMS::MRMFeatureFinderScoring& OpenMS::MRMFeatureFinderScoring::operator=(const OpenMS::MRMFeatureFinderScoring&)' 89 | class OPENMS_DLLAPI MRMFeatureFinderScoring : | ^~~~~~~~~~~~~~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Linking CXX executable ../../bin/OpenSwathFeatureXMLToTSV cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathFeatureXMLToTSV.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/OpenSwathFeatureXMLToTSV.dir/link.d CMakeFiles/OpenSwathFeatureXMLToTSV.dir/OpenSwathFeatureXMLToTSV.cpp.o -o ../../bin/OpenSwathFeatureXMLToTSV -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Built target OpenSwathFeatureXMLToTSV make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/PeakPickerHiRes.dir/build.make src/topp/CMakeFiles/PeakPickerHiRes.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/PeakPickerHiRes.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/PeakPickerHiRes.dir/build.make src/topp/CMakeFiles/PeakPickerHiRes.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Linking CXX executable ../../bin/OpenSwathRTNormalizer cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathRTNormalizer.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/OpenSwathRTNormalizer.dir/link.d CMakeFiles/OpenSwathRTNormalizer.dir/OpenSwathRTNormalizer.cpp.o -o ../../bin/OpenSwathRTNormalizer -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Built target OpenSwathRTNormalizer make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/PeakPickerWavelet.dir/build.make src/topp/CMakeFiles/PeakPickerWavelet.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/PeakPickerWavelet.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/PeakPickerWavelet.dir/build.make src/topp/CMakeFiles/PeakPickerWavelet.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Building CXX object src/topp/CMakeFiles/PeakPickerWavelet.dir/PeakPickerWavelet.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/PeakPickerWavelet.dir/PeakPickerWavelet.cpp.o -MF CMakeFiles/PeakPickerWavelet.dir/PeakPickerWavelet.cpp.o.d -o CMakeFiles/PeakPickerWavelet.dir/PeakPickerWavelet.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PeakPickerWavelet.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PeakPickerWavelet.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/XMLFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzMLFile.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PeakPickerWavelet.cpp:34: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PeakPickerWavelet.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.h:41: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.h:140:40: note: by 'OpenMS::OptimizePeakDeconvolution& OpenMS::OptimizePeakDeconvolution::operator=(const OpenMS::OptimizePeakDeconvolution&)' 140 | inline OptimizePeakDeconvolution & operator=(const OptimizePeakDeconvolution & opt) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.h:78:23: note: by 'OpenMS::PeakPickerCWT& OpenMS::PeakPickerCWT::operator=(const OpenMS::PeakPickerCWT&)' 78 | class OPENMS_DLLAPI PeakPickerCWT : | ^~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Building CXX object src/topp/CMakeFiles/PeakPickerHiRes.dir/PeakPickerHiRes.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/PeakPickerHiRes.dir/PeakPickerHiRes.cpp.o -MF CMakeFiles/PeakPickerHiRes.dir/PeakPickerHiRes.cpp.o.d -o CMakeFiles/PeakPickerHiRes.dir/PeakPickerHiRes.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PeakPickerHiRes.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PeakPickerHiRes.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/LogStream.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PeakPickerHiRes.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PeakPickerHiRes.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Linking CXX executable ../../bin/PeakPickerWavelet cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/PeakPickerWavelet.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/PeakPickerWavelet.dir/link.d CMakeFiles/PeakPickerWavelet.dir/PeakPickerWavelet.cpp.o -o ../../bin/PeakPickerWavelet -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Built target PeakPickerWavelet make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/PepNovoAdapter.dir/build.make src/topp/CMakeFiles/PepNovoAdapter.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/PepNovoAdapter.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/PepNovoAdapter.dir/build.make src/topp/CMakeFiles/PepNovoAdapter.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Linking CXX executable ../../bin/PeakPickerHiRes cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/PeakPickerHiRes.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/PeakPickerHiRes.dir/link.d CMakeFiles/PeakPickerHiRes.dir/PeakPickerHiRes.cpp.o -o ../../bin/PeakPickerHiRes -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Built target PeakPickerHiRes make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/PeptideIndexer.dir/build.make src/topp/CMakeFiles/PeptideIndexer.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/PeptideIndexer.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/PeptideIndexer.dir/build.make src/topp/CMakeFiles/PeptideIndexer.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Building CXX object src/topp/CMakeFiles/PeptideIndexer.dir/PeptideIndexer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/PeptideIndexer.dir/PeptideIndexer.cpp.o -MF CMakeFiles/PeptideIndexer.dir/PeptideIndexer.cpp.o.d -o CMakeFiles/PeptideIndexer.dir/PeptideIndexer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PeptideIndexer.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/PeptideIndexing.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PeptideIndexer.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/PeptideIndexing.h:113:22: note: by 'OpenMS::PeptideIndexing& OpenMS::PeptideIndexing::operator=(const OpenMS::PeptideIndexing&)' 113 | class OPENMS_DLLAPI PeptideIndexing : | ^~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Linking CXX executable ../../bin/PeptideIndexer cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/PeptideIndexer.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/PeptideIndexer.dir/link.d CMakeFiles/PeptideIndexer.dir/PeptideIndexer.cpp.o -o ../../bin/PeptideIndexer -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Built target PeptideIndexer make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/PercolatorAdapter.dir/build.make src/topp/CMakeFiles/PercolatorAdapter.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/PercolatorAdapter.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/PercolatorAdapter.dir/build.make src/topp/CMakeFiles/PercolatorAdapter.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Building CXX object src/topp/CMakeFiles/PepNovoAdapter.dir/PepNovoAdapter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/PepNovoAdapter.dir/PepNovoAdapter.cpp.o -MF CMakeFiles/PepNovoAdapter.dir/PepNovoAdapter.cpp.o.d -o CMakeFiles/PepNovoAdapter.dir/PepNovoAdapter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PepNovoAdapter.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MascotGenericFile.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PepNovoAdapter.cpp:45: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MascotGenericFile.h:62:23: note: by 'OpenMS::MascotGenericFile& OpenMS::MascotGenericFile::operator=(const OpenMS::MascotGenericFile&)' 62 | class OPENMS_DLLAPI MascotGenericFile : | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PepNovoAdapter.cpp:46: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ProteinHit.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ProteinIdentification.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/IdXMLFile.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PepNovoAdapter.cpp:36: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PepNovoAdapter.cpp:54: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/IDMapper.h:77:15: note: by 'OpenMS::IDMapper& OpenMS::IDMapper::operator=(const OpenMS::IDMapper&)' 77 | IDMapper& operator=(const IDMapper& rhs); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 79%] Linking CXX executable ../../bin/PepNovoAdapter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/PepNovoAdapter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/PepNovoAdapter.dir/link.d CMakeFiles/PepNovoAdapter.dir/PepNovoAdapter.cpp.o -o ../../bin/PepNovoAdapter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 79%] Built target PepNovoAdapter make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/PhosphoScoring.dir/build.make src/topp/CMakeFiles/PhosphoScoring.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/PhosphoScoring.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/PhosphoScoring.dir/build.make src/topp/CMakeFiles/PhosphoScoring.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 79%] Building CXX object src/topp/CMakeFiles/PercolatorAdapter.dir/PercolatorAdapter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/PercolatorAdapter.dir/PercolatorAdapter.cpp.o -MF CMakeFiles/PercolatorAdapter.dir/PercolatorAdapter.cpp.o.d -o CMakeFiles/PercolatorAdapter.dir/PercolatorAdapter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PercolatorAdapter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PercolatorAdapter.cpp:41: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PercolatorAdapter.cpp:36: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::FilterPeptideEvidences(EvidenceFilter&, std::vector&) [with EvidenceFilter = DigestionFilter]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:486:68: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:728:35: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::DigestionFilter]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 728 | std::not1(filter)); | ~~~~~~~~~^~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1138:24: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1147:26: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMetaValue]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:572:26: required from 'static void OpenMS::IDFilter::keepMatchingItemsUnroll(IDContainer&, const Predicate&) [with IDContainer = std::vector; Predicate = HasMetaValue]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1210:30: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMetaValue]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1358:31: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1368:35: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 79%] Building CXX object src/topp/CMakeFiles/PhosphoScoring.dir/PhosphoScoring.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/PhosphoScoring.dir/PhosphoScoring.cpp.o -MF CMakeFiles/PhosphoScoring.dir/PhosphoScoring.cpp.o.d -o CMakeFiles/PhosphoScoring.dir/PhosphoScoring.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PhosphoScoring.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PhosphoScoring.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PhosphoScoring.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/IDMapper.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PhosphoScoring.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/IDMapper.h:77:15: note: by 'OpenMS::IDMapper& OpenMS::IDMapper::operator=(const OpenMS::IDMapper&)' 77 | IDMapper& operator=(const IDMapper& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PhosphoScoring.cpp:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/AScore.h:72:23: note: by 'OpenMS::AScore& OpenMS::AScore::operator=(const OpenMS::AScore&)' 72 | class OPENMS_DLLAPI AScore: public DefaultParamHandler | ^~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 79%] Linking CXX executable ../../bin/PhosphoScoring cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/PhosphoScoring.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/PhosphoScoring.dir/link.d CMakeFiles/PhosphoScoring.dir/PhosphoScoring.cpp.o -o ../../bin/PhosphoScoring -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 79%] Built target PhosphoScoring make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/PrecursorIonSelector.dir/build.make src/topp/CMakeFiles/PrecursorIonSelector.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/PrecursorIonSelector.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/PrecursorIonSelector.dir/build.make src/topp/CMakeFiles/PrecursorIonSelector.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 79%] Linking CXX executable ../../bin/PercolatorAdapter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/PercolatorAdapter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/PercolatorAdapter.dir/link.d CMakeFiles/PercolatorAdapter.dir/PercolatorAdapter.cpp.o -o ../../bin/PercolatorAdapter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 79%] Built target PercolatorAdapter make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/PrecursorMassCorrector.dir/build.make src/topp/CMakeFiles/PrecursorMassCorrector.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/PrecursorMassCorrector.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/PrecursorMassCorrector.dir/build.make src/topp/CMakeFiles/PrecursorMassCorrector.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 79%] Building CXX object src/topp/CMakeFiles/PrecursorIonSelector.dir/PrecursorIonSelector.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/PrecursorIonSelector.dir/PrecursorIonSelector.cpp.o -MF CMakeFiles/PrecursorIonSelector.dir/PrecursorIonSelector.cpp.o.d -o CMakeFiles/PrecursorIonSelector.dir/PrecursorIonSelector.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PrecursorIonSelector.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelection.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PrecursorIonSelector.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DRange.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/OPTIONS/FeatureFileOptions.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/FeatureXMLFile.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PrecursorIonSelector.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelection.h:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:55:23: note: by 'OpenMS::PSLPFormulation& OpenMS::PSLPFormulation::operator=(const OpenMS::PSLPFormulation&)' 55 | class OPENMS_DLLAPI PSLPFormulation : | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelection.h:52:23: note: by 'OpenMS::PrecursorIonSelection& OpenMS::PrecursorIonSelection::operator=(const OpenMS::PrecursorIonSelection&)' 52 | class OPENMS_DLLAPI PrecursorIonSelection : | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PrecursorIonSelector.cpp:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.h:60:42: note: by 'OpenMS::PrecursorIonSelectionPreprocessing& OpenMS::PrecursorIonSelectionPreprocessing::operator=(const OpenMS::PrecursorIonSelectionPreprocessing&)' 60 | PrecursorIonSelectionPreprocessing & operator=(const PrecursorIonSelectionPreprocessing & source); | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 79%] Linking CXX executable ../../bin/PrecursorIonSelector cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/PrecursorIonSelector.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/PrecursorIonSelector.dir/link.d CMakeFiles/PrecursorIonSelector.dir/PrecursorIonSelector.cpp.o -o ../../bin/PrecursorIonSelector -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 79%] Building CXX object src/topp/CMakeFiles/PrecursorMassCorrector.dir/PrecursorMassCorrector.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/PrecursorMassCorrector.dir/PrecursorMassCorrector.cpp.o -MF CMakeFiles/PrecursorMassCorrector.dir/PrecursorMassCorrector.cpp.o.d -o CMakeFiles/PrecursorMassCorrector.dir/PrecursorMassCorrector.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PrecursorMassCorrector.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PrecursorMassCorrector.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/XMLFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzMLFile.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PrecursorMassCorrector.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:150:29: note: by 'OpenMS::FeatureFinderAlgorithm& OpenMS::FeatureFinderAlgorithm::operator=(const OpenMS::FeatureFinderAlgorithm&)' 150 | FeatureFinderAlgorithm& operator=(const FeatureFinderAlgorithm&); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.h:59:23: note: by 'OpenMS::FeatureFinderAlgorithmIsotopeWavelet& OpenMS::FeatureFinderAlgorithmIsotopeWavelet::operator=(const OpenMS::FeatureFinderAlgorithmIsotopeWavelet&)' 59 | class OPENMS_DLLAPI FeatureFinderAlgorithmIsotopeWavelet : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 79%] Built target PrecursorIonSelector make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/ProteinInference.dir/build.make src/topp/CMakeFiles/ProteinInference.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/ProteinInference.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/ProteinInference.dir/build.make src/topp/CMakeFiles/ProteinInference.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 79%] Linking CXX executable ../../bin/PrecursorMassCorrector cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/PrecursorMassCorrector.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/PrecursorMassCorrector.dir/link.d CMakeFiles/PrecursorMassCorrector.dir/PrecursorMassCorrector.cpp.o -o ../../bin/PrecursorMassCorrector -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 79%] Built target PrecursorMassCorrector make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/ProteinQuantifier.dir/build.make src/topp/CMakeFiles/ProteinQuantifier.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/ProteinQuantifier.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/ProteinQuantifier.dir/build.make src/topp/CMakeFiles/ProteinQuantifier.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 79%] Building CXX object src/topp/CMakeFiles/ProteinInference.dir/ProteinInference.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/ProteinInference.dir/ProteinInference.cpp.o -MF CMakeFiles/ProteinInference.dir/ProteinInference.cpp.o.d -o CMakeFiles/ProteinInference.dir/ProteinInference.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/ProteinInference.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/BasicProteinInferenceAlgorithm.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/ProteinInference.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/BasicProteinInferenceAlgorithm.h:36: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/BasicProteinInferenceAlgorithm.h:60:23: note: by 'OpenMS::BasicProteinInferenceAlgorithm::operator=' 60 | class OPENMS_DLLAPI BasicProteinInferenceAlgorithm : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/ProteinInference.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/FalseDiscoveryRate.h:236:25: note: by 'OpenMS::FalseDiscoveryRate& OpenMS::FalseDiscoveryRate::operator=(const OpenMS::FalseDiscoveryRate&)' 236 | FalseDiscoveryRate& operator=(const FalseDiscoveryRate&); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/ProteinInference.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/IDMergerAlgorithm.h:61:23: note: by 'OpenMS::IDMergerAlgorithm::operator=' 61 | class OPENMS_DLLAPI IDMergerAlgorithm: | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/ProteinInference.cpp:46: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusMapMergerAlgorithm.h:63:23: note: by 'OpenMS::ConsensusMapMergerAlgorithm::operator=' 63 | class OPENMS_DLLAPI ConsensusMapMergerAlgorithm: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 79%] Linking CXX executable ../../bin/ProteinInference cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/ProteinInference.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/ProteinInference.dir/link.d CMakeFiles/ProteinInference.dir/ProteinInference.cpp.o -o ../../bin/ProteinInference -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 79%] Built target ProteinInference make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/ProteinResolver.dir/build.make src/topp/CMakeFiles/ProteinResolver.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/ProteinResolver.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/ProteinResolver.dir/build.make src/topp/CMakeFiles/ProteinResolver.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 79%] Building CXX object src/topp/CMakeFiles/ProteinQuantifier.dir/ProteinQuantifier.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/ProteinQuantifier.dir/ProteinQuantifier.cpp.o -MF CMakeFiles/ProteinQuantifier.dir/ProteinQuantifier.cpp.o.d -o CMakeFiles/ProteinQuantifier.dir/ProteinQuantifier.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/ProteinQuantifier.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/ProteinQuantifier.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/ProteinQuantifier.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.h:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.h:53:23: note: by 'OpenMS::PeptideAndProteinQuant& OpenMS::PeptideAndProteinQuant::operator=(const OpenMS::PeptideAndProteinQuant&)' 53 | class OPENMS_DLLAPI PeptideAndProteinQuant : | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/ProteinQuantifier.cpp:46: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::FilterPeptideEvidences(EvidenceFilter&, std::vector&) [with EvidenceFilter = DigestionFilter]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:486:68: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:728:35: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::DigestionFilter]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 728 | std::not1(filter)); | ~~~~~~~~~^~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1138:24: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1147:26: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMetaValue]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:572:26: required from 'static void OpenMS::IDFilter::keepMatchingItemsUnroll(IDContainer&, const Predicate&) [with IDContainer = std::vector; Predicate = HasMetaValue]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1210:30: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMetaValue]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1358:31: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1368:35: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 79%] Building CXX object src/topp/CMakeFiles/ProteinResolver.dir/ProteinResolver.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/ProteinResolver.dir/ProteinResolver.cpp.o -MF CMakeFiles/ProteinResolver.dir/ProteinResolver.cpp.o.d -o CMakeFiles/ProteinResolver.dir/ProteinResolver.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/ProteinResolver.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/ConsensusXMLFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/ProteinResolver.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/ProteinResolver.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ProteinResolver.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/ProteinResolver.cpp:44: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ProteinResolver.h:67:23: note: by 'OpenMS::ProteinResolver& OpenMS::ProteinResolver::operator=(const OpenMS::ProteinResolver&)' 67 | ProteinResolver & operator=(const ProteinResolver & rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/ProteinResolver.cpp:45: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.h:53:23: note: by 'OpenMS::PeptideAndProteinQuant& OpenMS::PeptideAndProteinQuant::operator=(const OpenMS::PeptideAndProteinQuant&)' 53 | class OPENMS_DLLAPI PeptideAndProteinQuant : | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.h:79:38: note: by 'OpenMS::QuantitativeExperimentalDesign& OpenMS::QuantitativeExperimentalDesign::operator=(const OpenMS::QuantitativeExperimentalDesign&)' 79 | QuantitativeExperimentalDesign & operator=(const QuantitativeExperimentalDesign &); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 79%] Linking CXX executable ../../bin/ProteinQuantifier cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/ProteinQuantifier.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/ProteinQuantifier.dir/link.d CMakeFiles/ProteinQuantifier.dir/ProteinQuantifier.cpp.o -o ../../bin/ProteinQuantifier -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Built target ProteinQuantifier make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/PTModel.dir/build.make src/topp/CMakeFiles/PTModel.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/PTModel.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/PTModel.dir/build.make src/topp/CMakeFiles/PTModel.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Linking CXX executable ../../bin/ProteinResolver cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/ProteinResolver.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/ProteinResolver.dir/link.d CMakeFiles/ProteinResolver.dir/ProteinResolver.cpp.o -o ../../bin/ProteinResolver -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Built target ProteinResolver make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/PTPredict.dir/build.make src/topp/CMakeFiles/PTPredict.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/PTPredict.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/PTPredict.dir/build.make src/topp/CMakeFiles/PTPredict.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Building CXX object src/topp/CMakeFiles/PTPredict.dir/PTPredict.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/PTPredict.dir/PTPredict.cpp.o -MF CMakeFiles/PTPredict.dir/PTPredict.cpp.o.d -o CMakeFiles/PTPredict.dir/PTPredict.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PTPredict.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Building CXX object src/topp/CMakeFiles/PTModel.dir/PTModel.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/PTModel.dir/PTModel.cpp.o -MF CMakeFiles/PTModel.dir/PTModel.cpp.o.d -o CMakeFiles/PTModel.dir/PTModel.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PTModel.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Linking CXX executable ../../bin/PTPredict cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/PTPredict.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/PTPredict.dir/link.d CMakeFiles/PTPredict.dir/PTPredict.cpp.o -o ../../bin/PTPredict -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Built target PTPredict make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/QualityControl.dir/build.make src/topp/CMakeFiles/QualityControl.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/QualityControl.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/QualityControl.dir/build.make src/topp/CMakeFiles/QualityControl.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Linking CXX executable ../../bin/PTModel cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/PTModel.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/PTModel.dir/link.d CMakeFiles/PTModel.dir/PTModel.cpp.o -o ../../bin/PTModel -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Built target PTModel make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/RTModel.dir/build.make src/topp/CMakeFiles/RTModel.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/RTModel.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/RTModel.dir/build.make src/topp/CMakeFiles/RTModel.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Building CXX object src/topp/CMakeFiles/RTModel.dir/RTModel.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/RTModel.dir/RTModel.cpp.o -MF CMakeFiles/RTModel.dir/RTModel.cpp.o.d -o CMakeFiles/RTModel.dir/RTModel.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/RTModel.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Building CXX object src/topp/CMakeFiles/QualityControl.dir/QualityControl.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/QualityControl.dir/QualityControl.cpp.o -MF CMakeFiles/QualityControl.dir/QualityControl.cpp.o.d -o CMakeFiles/QualityControl.dir/QualityControl.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/QualityControl.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/Contaminants.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/QualityControl.cpp:52: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/QCBase.h:132:20: warning: identifier 'requires' is a keyword in C++20 [-Wc++20-compat] 132 | virtual Status requires() const = 0; | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/IDConflictResolverAlgorithm.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/QualityControl.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/QualityControl.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Linking CXX executable ../../bin/RTModel cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/RTModel.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/RTModel.dir/link.d CMakeFiles/RTModel.dir/RTModel.cpp.o -o ../../bin/RTModel -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Built target RTModel make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/RTPredict.dir/build.make src/topp/CMakeFiles/RTPredict.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/RTPredict.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/RTPredict.dir/build.make src/topp/CMakeFiles/RTPredict.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Linking CXX executable ../../bin/QualityControl cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/QualityControl.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/QualityControl.dir/link.d CMakeFiles/QualityControl.dir/QualityControl.cpp.o -o ../../bin/QualityControl -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Built target QualityControl make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SeedListGenerator.dir/build.make src/topp/CMakeFiles/SeedListGenerator.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/SeedListGenerator.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SeedListGenerator.dir/build.make src/topp/CMakeFiles/SeedListGenerator.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Building CXX object src/topp/CMakeFiles/RTPredict.dir/RTPredict.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/RTPredict.dir/RTPredict.cpp.o -MF CMakeFiles/RTPredict.dir/RTPredict.cpp.o.d -o CMakeFiles/RTPredict.dir/RTPredict.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/RTPredict.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Linking CXX executable ../../bin/RTPredict cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/RTPredict.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/RTPredict.dir/link.d CMakeFiles/RTPredict.dir/RTPredict.cpp.o -o ../../bin/RTPredict -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Building CXX object src/topp/CMakeFiles/SeedListGenerator.dir/SeedListGenerator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/SeedListGenerator.dir/SeedListGenerator.cpp.o -MF CMakeFiles/SeedListGenerator.dir/SeedListGenerator.cpp.o.d -o CMakeFiles/SeedListGenerator.dir/SeedListGenerator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SeedListGenerator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/ConsensusXMLFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SeedListGenerator.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SeedListGenerator.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Built target RTPredict make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SpecLibSearcher.dir/build.make src/topp/CMakeFiles/SpecLibSearcher.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/SpecLibSearcher.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SpecLibSearcher.dir/build.make src/topp/CMakeFiles/SpecLibSearcher.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Linking CXX executable ../../bin/SeedListGenerator cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SeedListGenerator.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/SeedListGenerator.dir/link.d CMakeFiles/SeedListGenerator.dir/SeedListGenerator.cpp.o -o ../../bin/SeedListGenerator -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Built target SeedListGenerator make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterBernNorm.dir/build.make src/topp/CMakeFiles/SpectraFilterBernNorm.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/SpectraFilterBernNorm.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterBernNorm.dir/build.make src/topp/CMakeFiles/SpectraFilterBernNorm.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Building CXX object src/topp/CMakeFiles/SpectraFilterBernNorm.dir/SpectraFilterBernNorm.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/SpectraFilterBernNorm.dir/SpectraFilterBernNorm.cpp.o -MF CMakeFiles/SpectraFilterBernNorm.dir/SpectraFilterBernNorm.cpp.o.d -o CMakeFiles/SpectraFilterBernNorm.dir/SpectraFilterBernNorm.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterBernNorm.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/BernNorm.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterBernNorm.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/BernNorm.h:76:16: note: by 'OpenMS::BernNorm& OpenMS::BernNorm::operator=(const OpenMS::BernNorm&)' 76 | BernNorm & operator=(const BernNorm & source); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterBernNorm.cpp:41: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterBernNorm.cpp:36: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Linking CXX executable ../../bin/SpectraFilterBernNorm cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpectraFilterBernNorm.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/SpectraFilterBernNorm.dir/link.d CMakeFiles/SpectraFilterBernNorm.dir/SpectraFilterBernNorm.cpp.o -o ../../bin/SpectraFilterBernNorm -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Built target SpectraFilterBernNorm make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/build.make src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/build.make src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Building CXX object src/topp/CMakeFiles/SpecLibSearcher.dir/SpecLibSearcher.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/SpecLibSearcher.dir/SpecLibSearcher.cpp.o -MF CMakeFiles/SpecLibSearcher.dir/SpecLibSearcher.cpp.o.d -o CMakeFiles/SpecLibSearcher.dir/SpecLibSearcher.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpecLibSearcher.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectraSTSimilarityScore.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpecLibSearcher.cpp:41: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectraSTSimilarityScore.h:80:32: note: by 'OpenMS::SpectraSTSimilarityScore& OpenMS::SpectraSTSimilarityScore::operator=(const OpenMS::SpectraSTSimilarityScore&)' 80 | SpectraSTSimilarityScore & operator=(const SpectraSTSimilarityScore & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpecLibSearcher.cpp:42: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h:74:28: note: by 'OpenMS::ZhangSimilarityScore& OpenMS::ZhangSimilarityScore::operator=(const OpenMS::ZhangSimilarityScore&)' 74 | ZhangSimilarityScore & operator=(const ZhangSimilarityScore & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpecLibSearcher.cpp:44: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MSPFile.h:72:15: note: by 'OpenMS::MSPFile& OpenMS::MSPFile::operator=(const OpenMS::MSPFile&)' 72 | MSPFile & operator=(const MSPFile & rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpecLibSearcher.cpp:46: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpecLibSearcher.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Building CXX object src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/SpectraFilterMarkerMower.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/SpectraFilterMarkerMower.cpp.o -MF CMakeFiles/SpectraFilterMarkerMower.dir/SpectraFilterMarkerMower.cpp.o.d -o CMakeFiles/SpectraFilterMarkerMower.dir/SpectraFilterMarkerMower.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterMarkerMower.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/MarkerMower.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterMarkerMower.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/MarkerMower.h:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/PeakMarker.h:62:18: note: by 'OpenMS::PeakMarker& OpenMS::PeakMarker::operator=(const OpenMS::PeakMarker&)' 62 | PeakMarker & operator=(const PeakMarker & source); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/MarkerMower.h:42: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterMarkerMower.cpp:36: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/MarkerMower.h:69:19: note: by 'OpenMS::MarkerMower& OpenMS::MarkerMower::operator=(const OpenMS::MarkerMower&)' 69 | MarkerMower & operator=(const MarkerMower & source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Linking CXX executable ../../bin/SpectraFilterMarkerMower cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpectraFilterMarkerMower.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/SpectraFilterMarkerMower.dir/link.d CMakeFiles/SpectraFilterMarkerMower.dir/SpectraFilterMarkerMower.cpp.o -o ../../bin/SpectraFilterMarkerMower -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Built target SpectraFilterMarkerMower make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterNLargest.dir/build.make src/topp/CMakeFiles/SpectraFilterNLargest.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/SpectraFilterNLargest.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterNLargest.dir/build.make src/topp/CMakeFiles/SpectraFilterNLargest.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Linking CXX executable ../../bin/SpecLibSearcher cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpecLibSearcher.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/SpecLibSearcher.dir/link.d CMakeFiles/SpecLibSearcher.dir/SpecLibSearcher.cpp.o -o ../../bin/SpecLibSearcher -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Built target SpecLibSearcher make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterNormalizer.dir/build.make src/topp/CMakeFiles/SpectraFilterNormalizer.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/SpectraFilterNormalizer.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterNormalizer.dir/build.make src/topp/CMakeFiles/SpectraFilterNormalizer.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Building CXX object src/topp/CMakeFiles/SpectraFilterNLargest.dir/SpectraFilterNLargest.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/SpectraFilterNLargest.dir/SpectraFilterNLargest.cpp.o -MF CMakeFiles/SpectraFilterNLargest.dir/SpectraFilterNLargest.cpp.o.d -o CMakeFiles/SpectraFilterNLargest.dir/SpectraFilterNLargest.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterNLargest.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NLargest.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterNLargest.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterNLargest.cpp:36: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NLargest.h:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NLargest.h:72:16: note: by 'OpenMS::NLargest& OpenMS::NLargest::operator=(const OpenMS::NLargest&)' 72 | NLargest & operator=(const NLargest & source); | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Linking CXX executable ../../bin/SpectraFilterNLargest cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpectraFilterNLargest.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/SpectraFilterNLargest.dir/link.d CMakeFiles/SpectraFilterNLargest.dir/SpectraFilterNLargest.cpp.o -o ../../bin/SpectraFilterNLargest -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Built target SpectraFilterNLargest make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/build.make src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/build.make src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Building CXX object src/topp/CMakeFiles/SpectraFilterNormalizer.dir/SpectraFilterNormalizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/SpectraFilterNormalizer.dir/SpectraFilterNormalizer.cpp.o -MF CMakeFiles/SpectraFilterNormalizer.dir/SpectraFilterNormalizer.cpp.o.d -o CMakeFiles/SpectraFilterNormalizer.dir/SpectraFilterNormalizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterNormalizer.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterNormalizer.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterNormalizer.cpp:36: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h:70:18: note: by 'OpenMS::Normalizer& OpenMS::Normalizer::operator=(const OpenMS::Normalizer&)' 70 | Normalizer & operator=(const Normalizer & source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Linking CXX executable ../../bin/SpectraFilterNormalizer cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpectraFilterNormalizer.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/SpectraFilterNormalizer.dir/link.d CMakeFiles/SpectraFilterNormalizer.dir/SpectraFilterNormalizer.cpp.o -o ../../bin/SpectraFilterNormalizer -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Built target SpectraFilterNormalizer make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterScaler.dir/build.make src/topp/CMakeFiles/SpectraFilterScaler.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/SpectraFilterScaler.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterScaler.dir/build.make src/topp/CMakeFiles/SpectraFilterScaler.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Building CXX object src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/SpectraFilterParentPeakMower.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/SpectraFilterParentPeakMower.cpp.o -MF CMakeFiles/SpectraFilterParentPeakMower.dir/SpectraFilterParentPeakMower.cpp.o.d -o CMakeFiles/SpectraFilterParentPeakMower.dir/SpectraFilterParentPeakMower.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterParentPeakMower.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ParentPeakMower.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterParentPeakMower.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterParentPeakMower.cpp:36: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ParentPeakMower.h:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ParentPeakMower.h:74:22: note: by 'OpenMS::ParentPeakMower& OpenMS::ParentPeakMower::operator=(const OpenMS::ParentPeakMower&)' 74 | ParentPeakMower& operator=(const ParentPeakMower& source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Linking CXX executable ../../bin/SpectraFilterParentPeakMower cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpectraFilterParentPeakMower.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/SpectraFilterParentPeakMower.dir/link.d CMakeFiles/SpectraFilterParentPeakMower.dir/SpectraFilterParentPeakMower.cpp.o -o ../../bin/SpectraFilterParentPeakMower -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Built target SpectraFilterParentPeakMower make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/build.make src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/build.make src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Building CXX object src/topp/CMakeFiles/SpectraFilterScaler.dir/SpectraFilterScaler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/SpectraFilterScaler.dir/SpectraFilterScaler.cpp.o -MF CMakeFiles/SpectraFilterScaler.dir/SpectraFilterScaler.cpp.o.d -o CMakeFiles/SpectraFilterScaler.dir/SpectraFilterScaler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterScaler.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Scaler.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterScaler.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterScaler.cpp:36: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Scaler.h:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Scaler.h:66:14: note: by 'OpenMS::Scaler& OpenMS::Scaler::operator=(const OpenMS::Scaler&)' 66 | Scaler & operator=(const Scaler & source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Linking CXX executable ../../bin/SpectraFilterScaler cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpectraFilterScaler.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/SpectraFilterScaler.dir/link.d CMakeFiles/SpectraFilterScaler.dir/SpectraFilterScaler.cpp.o -o ../../bin/SpectraFilterScaler -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Built target SpectraFilterScaler make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/build.make src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/build.make src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Building CXX object src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/SpectraFilterSqrtMower.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/SpectraFilterSqrtMower.cpp.o -MF CMakeFiles/SpectraFilterSqrtMower.dir/SpectraFilterSqrtMower.cpp.o.d -o CMakeFiles/SpectraFilterSqrtMower.dir/SpectraFilterSqrtMower.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterSqrtMower.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SqrtMower.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterSqrtMower.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterSqrtMower.cpp:36: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SqrtMower.h:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SqrtMower.h:66:17: note: by 'OpenMS::SqrtMower& OpenMS::SqrtMower::operator=(const OpenMS::SqrtMower&)' 66 | SqrtMower & operator=(const SqrtMower & source); | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Linking CXX executable ../../bin/SpectraFilterSqrtMower cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpectraFilterSqrtMower.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/SpectraFilterSqrtMower.dir/link.d CMakeFiles/SpectraFilterSqrtMower.dir/SpectraFilterSqrtMower.cpp.o -o ../../bin/SpectraFilterSqrtMower -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Built target SpectraFilterSqrtMower make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterWindowMower.dir/build.make src/topp/CMakeFiles/SpectraFilterWindowMower.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/SpectraFilterWindowMower.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterWindowMower.dir/build.make src/topp/CMakeFiles/SpectraFilterWindowMower.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Building CXX object src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/SpectraFilterThresholdMower.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/SpectraFilterThresholdMower.cpp.o -MF CMakeFiles/SpectraFilterThresholdMower.dir/SpectraFilterThresholdMower.cpp.o.d -o CMakeFiles/SpectraFilterThresholdMower.dir/SpectraFilterThresholdMower.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterThresholdMower.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ThresholdMower.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterThresholdMower.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterThresholdMower.cpp:36: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ThresholdMower.h:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ThresholdMower.h:66:22: note: by 'OpenMS::ThresholdMower& OpenMS::ThresholdMower::operator=(const OpenMS::ThresholdMower&)' 66 | ThresholdMower & operator=(const ThresholdMower & source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Linking CXX executable ../../bin/SpectraFilterThresholdMower cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpectraFilterThresholdMower.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/SpectraFilterThresholdMower.dir/link.d CMakeFiles/SpectraFilterThresholdMower.dir/SpectraFilterThresholdMower.cpp.o -o ../../bin/SpectraFilterThresholdMower -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Built target SpectraFilterThresholdMower make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SpectraMerger.dir/build.make src/topp/CMakeFiles/SpectraMerger.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/SpectraMerger.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SpectraMerger.dir/build.make src/topp/CMakeFiles/SpectraMerger.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Building CXX object src/topp/CMakeFiles/SpectraFilterWindowMower.dir/SpectraFilterWindowMower.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/SpectraFilterWindowMower.dir/SpectraFilterWindowMower.cpp.o -MF CMakeFiles/SpectraFilterWindowMower.dir/SpectraFilterWindowMower.cpp.o.d -o CMakeFiles/SpectraFilterWindowMower.dir/SpectraFilterWindowMower.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterWindowMower.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/WindowMower.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterWindowMower.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterWindowMower.cpp:36: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/WindowMower.h:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/WindowMower.h:69:18: note: by 'OpenMS::WindowMower& OpenMS::WindowMower::operator=(const OpenMS::WindowMower&)' 69 | WindowMower& operator=(const WindowMower& source); | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Linking CXX executable ../../bin/SpectraFilterWindowMower cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpectraFilterWindowMower.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/SpectraFilterWindowMower.dir/link.d CMakeFiles/SpectraFilterWindowMower.dir/SpectraFilterWindowMower.cpp.o -o ../../bin/SpectraFilterWindowMower -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Built target SpectraFilterWindowMower make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/TextExporter.dir/build.make src/topp/CMakeFiles/TextExporter.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/TextExporter.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/TextExporter.dir/build.make src/topp/CMakeFiles/TextExporter.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Building CXX object src/topp/CMakeFiles/SpectraMerger.dir/SpectraMerger.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/SpectraMerger.dir/SpectraMerger.cpp.o -MF CMakeFiles/SpectraMerger.dir/SpectraMerger.cpp.o.d -o CMakeFiles/SpectraMerger.dir/SpectraMerger.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraMerger.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraMerger.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:41: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h:49: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:73:35: note: by 'OpenMS::BinnedSpectrumCompareFunctor& OpenMS::BinnedSpectrumCompareFunctor::operator=(const OpenMS::BinnedSpectrumCompareFunctor&)' 73 | BinnedSpectrumCompareFunctor& operator=(const BinnedSpectrumCompareFunctor& source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:42: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h:84:25: note: by 'OpenMS::SpectrumAlignment& OpenMS::SpectrumAlignment::operator=(const OpenMS::SpectrumAlignment&)' 84 | SpectrumAlignment & operator=(const SpectrumAlignment & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:75:11: note: by 'OpenMS::SpectraMerger::SpectraDistance_::operator=' 75 | class SpectraDistance_ : | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:146:20: note: by 'OpenMS::SpectraMerger& OpenMS::SpectraMerger::operator=(const OpenMS::SpectraMerger&)' 146 | SpectraMerger& operator=(const SpectraMerger& source); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraMerger.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraMerger.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Building CXX object src/topp/CMakeFiles/TextExporter.dir/TextExporter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/TextExporter.dir/TextExporter.cpp.o -MF CMakeFiles/TextExporter.dir/TextExporter.cpp.o.d -o CMakeFiles/TextExporter.dir/TextExporter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/TextExporter.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/TextExporter.cpp:43: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/TextExporter.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Linking CXX executable ../../bin/SpectraMerger cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpectraMerger.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/SpectraMerger.dir/link.d CMakeFiles/SpectraMerger.dir/SpectraMerger.cpp.o -o ../../bin/SpectraMerger -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Built target SpectraMerger make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/TOFCalibration.dir/build.make src/topp/CMakeFiles/TOFCalibration.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/TOFCalibration.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/TOFCalibration.dir/build.make src/topp/CMakeFiles/TOFCalibration.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Building CXX object src/topp/CMakeFiles/TOFCalibration.dir/TOFCalibration.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/TOFCalibration.dir/TOFCalibration.cpp.o -MF CMakeFiles/TOFCalibration.dir/TOFCalibration.cpp.o.d -o CMakeFiles/TOFCalibration.dir/TOFCalibration.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/TOFCalibration.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/CALIBRATION/TOFCalibration.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/TOFCalibration.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/XMLFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzMLFile.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/TOFCalibration.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/CALIBRATION/TOFCalibration.h:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/CALIBRATION/TOFCalibration.h:41: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.h:140:40: note: by 'OpenMS::OptimizePeakDeconvolution& OpenMS::OptimizePeakDeconvolution::operator=(const OpenMS::OptimizePeakDeconvolution&)' 140 | inline OptimizePeakDeconvolution & operator=(const OptimizePeakDeconvolution & opt) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.h:78:23: note: by 'OpenMS::PeakPickerCWT& OpenMS::PeakPickerCWT::operator=(const OpenMS::PeakPickerCWT&)' 78 | class OPENMS_DLLAPI PeakPickerCWT : | ^~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/CALIBRATION/TOFCalibration.h:66:23: note: by 'OpenMS::TOFCalibration& OpenMS::TOFCalibration::operator=(const OpenMS::TOFCalibration&)' 66 | class OPENMS_DLLAPI TOFCalibration : | ^~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Linking CXX executable ../../bin/TextExporter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/TextExporter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/TextExporter.dir/link.d CMakeFiles/TextExporter.dir/TextExporter.cpp.o -o ../../bin/TextExporter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Built target TextExporter make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/XFDR.dir/build.make src/topp/CMakeFiles/XFDR.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/XFDR.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/XFDR.dir/build.make src/topp/CMakeFiles/XFDR.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Linking CXX executable ../../bin/TOFCalibration cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/TOFCalibration.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/TOFCalibration.dir/link.d CMakeFiles/TOFCalibration.dir/TOFCalibration.cpp.o -o ../../bin/TOFCalibration -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Built target TOFCalibration make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/XTandemAdapter.dir/build.make src/topp/CMakeFiles/XTandemAdapter.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/XTandemAdapter.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/XTandemAdapter.dir/build.make src/topp/CMakeFiles/XTandemAdapter.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Building CXX object src/topp/CMakeFiles/XFDR.dir/XFDR.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/XFDR.dir/XFDR.cpp.o -MF CMakeFiles/XFDR.dir/XFDR.cpp.o.d -o CMakeFiles/XFDR.dir/XFDR.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/XFDR.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/XQuestResultXMLFile.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/XFDR.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/XFDR.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/XLMS/XFDRAlgorithm.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/XFDR.cpp:43: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/XLMS/XFDRAlgorithm.h:65:23: note: by 'OpenMS::XFDRAlgorithm& OpenMS::XFDRAlgorithm::operator=(const OpenMS::XFDRAlgorithm&)' 65 | class OPENMS_DLLAPI XFDRAlgorithm : | ^~~~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Building CXX object src/topp/CMakeFiles/XTandemAdapter.dir/XTandemAdapter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/XTandemAdapter.dir/XTandemAdapter.cpp.o -MF CMakeFiles/XTandemAdapter.dir/XTandemAdapter.cpp.o.d -o CMakeFiles/XTandemAdapter.dir/XTandemAdapter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/XTandemAdapter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/PeptideIndexing.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/XTandemAdapter.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/PeptideIndexing.h:113:22: note: by 'OpenMS::PeptideIndexing& OpenMS::PeptideIndexing::operator=(const OpenMS::PeptideIndexing&)' 113 | class OPENMS_DLLAPI PeptideIndexing : | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/XTandemAdapter.cpp:48: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ProteinHit.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ProteinIdentification.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/SearchEngineBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/XTandemAdapter.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 84%] Linking CXX executable ../../bin/XFDR cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/XFDR.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/XFDR.dir/link.d CMakeFiles/XFDR.dir/XFDR.cpp.o -o ../../bin/XFDR -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 84%] Built target XFDR make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 84%] Generating ui_TheoreticalSpectrumGenerationDialog.h cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/ui_TheoreticalSpectrumGenerationDialog.h /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.ui make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 84%] Generating qrc_resources.cpp cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/lib64/qt5/bin/rcc --name resources --output /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/qrc_resources.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ICONS/resources.qrc make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 84%] Generating ui_DataFilterDialog.h cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/ui_DataFilterDialog.h /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/DataFilterDialog.ui make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 84%] Generating ui_FeatureEditDialog.h cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/ui_FeatureEditDialog.h /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/FeatureEditDialog.ui make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 84%] Generating ui_FilterList.h cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/ui_FilterList.h /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/FilterList.ui make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 86%] Generating ui_FilterableList.h cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/ui_FilterableList.h /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/MISC/FilterableList.ui make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 86%] Generating ui_InputFile.h cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/ui_InputFile.h /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/InputFile.ui make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 86%] Generating ui_InputFileList.h cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/ui_InputFileList.h /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/InputFileList.ui make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 86%] Generating ui_LayerStatisticsDialog.h cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/ui_LayerStatisticsDialog.h /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/LayerStatisticsDialog.ui make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 86%] Generating ui_ListFilterDialog.h cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/ui_ListFilterDialog.h /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/ListFilterDialog.ui make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 86%] Generating ui_OutputDirectory.h cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/ui_OutputDirectory.h /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/OutputDirectory.ui make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 86%] Generating ui_ParamEditor.h cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/ui_ParamEditor.h /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ParamEditor.ui make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 86%] Generating ui_Plot1DGoToDialog.h cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/ui_Plot1DGoToDialog.h /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/Plot1DGoToDialog.ui make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 86%] Generating ui_Plot1DPrefDialog.h cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/ui_Plot1DPrefDialog.h /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/Plot1DPrefDialog.ui make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 86%] Generating ui_Plot2DGoToDialog.h cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/ui_Plot2DGoToDialog.h /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/Plot2DGoToDialog.ui make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Generating ui_Plot2DPrefDialog.h cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/ui_Plot2DPrefDialog.h /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/Plot2DPrefDialog.ui make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Generating ui_Plot3DPrefDialog.h cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/ui_Plot3DPrefDialog.h /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/Plot3DPrefDialog.ui make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Generating ui_PythonModuleRequirement.h cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/ui_PythonModuleRequirement.h /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/PythonModuleRequirement.ui make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Generating ui_PythonSelector.h cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/ui_PythonSelector.h /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/PythonSelector.ui make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Generating ui_SequenceVisualizer.h cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/ui_SequenceVisualizer.h /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/SequenceVisualizer.ui make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Generating ui_SpectrumAlignmentDialog.h cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/ui_SpectrumAlignmentDialog.h /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/SpectrumAlignmentDialog.ui make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Generating ui_SwathLibraryStats.h cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/ui_SwathLibraryStats.h /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/SwathLibraryStats.ui make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Generating ui_SwathTabWidget.h cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/ui_SwathTabWidget.h /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/SwathTabWidget.ui make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Generating ui_SwathWizardBase.h cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/ui_SwathWizardBase.h /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/SwathWizardBase.ui make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Generating ui_TOPPASIOMappingDialog.h cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/ui_TOPPASIOMappingDialog.h /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/TOPPASIOMappingDialog.ui make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Generating ui_TOPPASInputFileDialog.h cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/ui_TOPPASInputFileDialog.h /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/TOPPASInputFileDialog.ui make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Generating ui_TOPPASInputFilesDialog.h cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/ui_TOPPASInputFilesDialog.h /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/TOPPASInputFilesDialog.ui make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Generating ui_TOPPASOutputFilesDialog.h cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/ui_TOPPASOutputFilesDialog.h /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/TOPPASOutputFilesDialog.ui make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Generating ui_TOPPASVertexNameDialog.h cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/ui_TOPPASVertexNameDialog.h /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/TOPPASVertexNameDialog.ui make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Generating ui_TOPPViewOpenDialog.h cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/ui_TOPPViewOpenDialog.h /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/TOPPViewOpenDialog.ui make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Generating ui_TOPPViewPrefDialog.h cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/ui_TOPPViewPrefDialog.h /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/TOPPViewPrefDialog.ui make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 84%] Linking CXX executable ../../bin/XTandemAdapter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/XTandemAdapter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/XTandemAdapter.dir/link.d CMakeFiles/XTandemAdapter.dir/XTandemAdapter.cpp.o -o ../../bin/XTandemAdapter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Built target XTandemAdapter make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DDistanceItem.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DDistanceItem.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DDistanceItem.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DDistanceItem.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DDistanceItem.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot1DCanvas.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DDistanceItem.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotation1DItem.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotation1DDistanceItem.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DDistanceItem.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:45: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:135:27: note: by 'OpenMS::PlotCanvas& OpenMS::PlotCanvas::operator=(const OpenMS::PlotCanvas&)' 135 | class OPENMS_GUI_DLLAPI PlotCanvas : | ^~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot1DCanvas.h:70:27: note: by 'OpenMS::Plot1DCanvas& OpenMS::Plot1DCanvas::operator=(const OpenMS::Plot1DCanvas&)' 70 | class OPENMS_GUI_DLLAPI Plot1DCanvas : | ^~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DItem.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DItem.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DItem.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DItem.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DItem.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/OpenMS_GUI_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/OpenMS_GUI_autogen/mocs_compilation.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/OpenMS_GUI_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/OpenMS_GUI_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/mocs_compilation.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/../../../../../src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/SwathWizardBase.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/moc_SwathWizardBase.cpp:10, from /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/mocs_compilation.cpp:4: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/../../../../../src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/SwathWizardBase.h:73:27: note: by 'OpenMS::SwathWizardBase& OpenMS::SwathWizardBase::operator=(const OpenMS::SwathWizardBase&)' 73 | class OPENMS_GUI_DLLAPI SwathWizardBase : | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/moc_TOPPASBase.cpp:10, from /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/mocs_compilation.cpp:5: /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/../../../../../src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPASBase.h:79:27: note: by 'OpenMS::TOPPASBase& OpenMS::TOPPASBase::operator=(const OpenMS::TOPPASBase&)' 79 | class OPENMS_GUI_DLLAPI TOPPASBase : | ^~~~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/../../../../../src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPViewBase.h:48, from /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/moc_TOPPViewBase.cpp:10, from /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/mocs_compilation.cpp:6: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_construct.h:61, from /usr/include/c++/13/bits/stl_tempbuf.h:61, from /usr/include/c++/13/memory:66, from /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/moc_INIFileEditorWindow.cpp:9, from /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/mocs_compilation.cpp:2: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:135:27: note: by 'OpenMS::PlotCanvas& OpenMS::PlotCanvas::operator=(const OpenMS::PlotCanvas&)' 135 | class OPENMS_GUI_DLLAPI PlotCanvas : | ^~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/../../../../../src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPViewBase.h:124:27: note: by 'OpenMS::TOPPViewBase& OpenMS::TOPPViewBase::operator=(const OpenMS::TOPPViewBase&)' 124 | class OPENMS_GUI_DLLAPI TOPPViewBase : | ^~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Plot1DCanvas.cpp:10, from /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/mocs_compilation.cpp:51: /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/../../../../../src/openms_gui/include/OpenMS/VISUAL/Plot1DCanvas.h:70:27: note: by 'OpenMS::Plot1DCanvas& OpenMS::Plot1DCanvas::operator=(const OpenMS::Plot1DCanvas&)' 70 | class OPENMS_GUI_DLLAPI Plot1DCanvas : | ^~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Plot2DCanvas.cpp:10, from /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/mocs_compilation.cpp:53: /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/../../../../../src/openms_gui/include/OpenMS/VISUAL/Plot2DCanvas.h:70:27: note: by 'OpenMS::Plot2DCanvas& OpenMS::Plot2DCanvas::operator=(const OpenMS::Plot2DCanvas&)' 70 | class OPENMS_GUI_DLLAPI Plot2DCanvas : | ^~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Plot3DCanvas.cpp:10, from /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/mocs_compilation.cpp:55: /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/../../../make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' ../../src/openms_gui/include/OpenMS/VISUAL/Plot3DCanvas.h:66:27: note: by 'OpenMS::Plot3DCanvas& OpenMS::Plot3DCanvas::operator=(const OpenMS::Plot3DCanvas&)' 66 | class OPENMS_GUI_DLLAPI Plot3DCanvas : | ^~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SpectraIDViewTab.cpp:10, from /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/mocs_compilation.cpp:62: /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/../../../../../src/openms_gui/include/OpenMS/VISUAL/SpectraIDViewTab.h:59:27: note: by 'OpenMS::SpectraIDViewTab& OpenMS::SpectraIDViewTab::operator=(const OpenMS::SpectraIDViewTab&)' 59 | class OPENMS_GUI_DLLAPI SpectraIDViewTab : | ^~~~~~~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot1DCanvas.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotation1DItem.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotation1DPeakItem.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:45: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:135:27: note: by 'OpenMS::PlotCanvas& OpenMS::PlotCanvas::operator=(const OpenMS::PlotCanvas&)' 135 | class OPENMS_GUI_DLLAPI PlotCanvas : | ^~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot1DCanvas.h:70:27: note: by 'OpenMS::Plot1DCanvas& OpenMS::Plot1DCanvas::operator=(const OpenMS::Plot1DCanvas&)' 70 | class OPENMS_GUI_DLLAPI Plot1DCanvas : | ^~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp: In member function 'virtual void OpenMS::Annotation1DPeakItem::draw(OpenMS::Plot1DCanvas*, QPainter&, bool)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp:161:29: warning: 'QLineF::IntersectType QLineF::intersect(const QLineF&, QPointF*) const' is deprecated: Use intersects() instead [-Wdeprecated-declarations] 161 | itype = line.intersect(top, ip); | ~~~~~~~~~~~~~~^~~~~~~~~ In file included from /usr/include/qt5/QtGui/qmatrix.h:47, from /usr/include/qt5/QtGui/qbrush.h:49, from /usr/include/qt5/QtGui/qpen.h:45, from /usr/include/qt5/QtGui/QPen:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotations1DContainer.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:51: /usr/include/qt5/QtCore/qline.h:256:19: note: declared here 256 | IntersectType intersect(const QLineF &l, QPointF *intersectionPoint) const; | ^~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp:169:29: warning: 'QLineF::IntersectType QLineF::intersect(const QLineF&, QPointF*) const' is deprecated: Use intersects() instead [-Wdeprecated-declarations] 169 | itype = line.intersect(left, ip); | ~~~~~~~~~~~~~~^~~~~~~~~~ /usr/include/qt5/QtCore/qline.h:256:19: note: declared here 256 | IntersectType intersect(const QLineF &l, QPointF *intersectionPoint) const; | ^~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp:178:29: warning: 'QLineF::IntersectType QLineF::intersect(const QLineF&, QPointF*) const' is deprecated: Use intersects() instead [-Wdeprecated-declarations] 178 | itype = line.intersect(right, ip); | ~~~~~~~~~~~~~~^~~~~~~~~~~ /usr/include/qt5/QtCore/qline.h:256:19: note: declared here 256 | IntersectType intersect(const QLineF &l, QPointF *intersectionPoint) const; | ^~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp:187:29: warning: 'QLineF::IntersectType QLineF::intersect(const QLineF&, QPointF*) const' is deprecated: Use intersects() instead [-Wdeprecated-declarations] 187 | itype = line.intersect(bottom, ip); | ~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/qt5/QtCore/qline.h:256:19: note: declared here 256 | IntersectType intersect(const QLineF &l, QPointF *intersectionPoint) const; | ^~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 88%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot1DCanvas.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotation1DItem.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotation1DCaret.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:45: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:135:27: note: by 'OpenMS::PlotCanvas& OpenMS::PlotCanvas::operator=(const OpenMS::PlotCanvas&)' 135 | class OPENMS_GUI_DLLAPI PlotCanvas : | ^~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot1DCanvas.h:70:27: note: by 'OpenMS::Plot1DCanvas& OpenMS::Plot1DCanvas::operator=(const OpenMS::Plot1DCanvas&)' 70 | class OPENMS_GUI_DLLAPI Plot1DCanvas : | ^~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp: In member function 'virtual void OpenMS::Annotation1DCaret::draw(OpenMS::Plot1DCanvas*, QPainter&, bool)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp:161:29: warning: 'QLineF::IntersectType QLineF::intersect(const QLineF&, QPointF*) const' is deprecated: Use intersects() instead [-Wdeprecated-declarations] 161 | itype = line.intersect(top, ip); | ~~~~~~~~~~~~~~^~~~~~~~~ In file included from /usr/include/qt5/QtGui/qmatrix.h:47, from /usr/include/qt5/QtGui/qtransform.h:43, from /usr/include/qt5/QtGui/qstatictext.h:48, from /usr/include/qt5/QtGui/QStaticText:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotation1DCaret.h:40: /usr/include/qt5/QtCore/qline.h:256:19: note: declared here 256 | IntersectType intersect(const QLineF &l, QPointF *intersectionPoint) const; | ^~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp:169:29: warning: 'QLineF::IntersectType QLineF::intersect(const QLineF&, QPointF*) const' is deprecated: Use intersects() instead [-Wdeprecated-declarations] 169 | itype = line.intersect(left, ip); | ~~~~~~~~~~~~~~^~~~~~~~~~ /usr/include/qt5/QtCore/qline.h:256:19: note: declared here 256 | IntersectType intersect(const QLineF &l, QPointF *intersectionPoint) const; | ^~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp:178:29: warning: 'QLineF::IntersectType QLineF::intersect(const QLineF&, QPointF*) const' is deprecated: Use intersects() instead [-Wdeprecated-declarations] 178 | itype = line.intersect(right, ip); | ~~~~~~~~~~~~~~^~~~~~~~~~~ /usr/include/qt5/QtCore/qline.h:256:19: note: declared here 256 | IntersectType intersect(const QLineF &l, QPointF *intersectionPoint) const; | ^~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp:187:29: warning: 'QLineF::IntersectType QLineF::intersect(const QLineF&, QPointF*) const' is deprecated: Use intersects() instead [-Wdeprecated-declarations] 187 | itype = line.intersect(bottom, ip); | ~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/qt5/QtCore/qline.h:256:19: note: declared here 256 | IntersectType intersect(const QLineF &l, QPointF *intersectionPoint) const; | ^~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 88%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DTextItem.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DTextItem.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DTextItem.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DTextItem.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DTextItem.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot1DCanvas.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DTextItem.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotation1DItem.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotation1DTextItem.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DTextItem.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:45: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:135:27: note: by 'OpenMS::PlotCanvas& OpenMS::PlotCanvas::operator=(const OpenMS::PlotCanvas&)' 135 | class OPENMS_GUI_DLLAPI PlotCanvas : | ^~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot1DCanvas.h:70:27: note: by 'OpenMS::Plot1DCanvas& OpenMS::Plot1DCanvas::operator=(const OpenMS::Plot1DCanvas&)' 70 | class OPENMS_GUI_DLLAPI Plot1DCanvas : | ^~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 88%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotations1DContainer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotations1DContainer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotations1DContainer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotations1DContainer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ANNOTATION/Annotations1DContainer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 88%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/INIFileEditorWindow.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/INIFileEditorWindow.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/INIFileEditorWindow.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/INIFileEditorWindow.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/INIFileEditorWindow.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 88%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DVerticalLineItem.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DVerticalLineItem.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DVerticalLineItem.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DVerticalLineItem.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DVerticalLineItem.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot1DCanvas.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DVerticalLineItem.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotation1DItem.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotation1DVerticalLineItem.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DVerticalLineItem.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:45: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:135:27: note: by 'OpenMS::PlotCanvas& OpenMS::PlotCanvas::operator=(const OpenMS::PlotCanvas&)' 135 | class OPENMS_GUI_DLLAPI PlotCanvas : | ^~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot1DCanvas.h:70:27: note: by 'OpenMS::Plot1DCanvas& OpenMS::Plot1DCanvas::operator=(const OpenMS::Plot1DCanvas&)' 70 | class OPENMS_GUI_DLLAPI Plot1DCanvas : | ^~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 88%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/SwathWizardBase.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/SwathWizardBase.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/SwathWizardBase.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/SwathWizardBase.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/SwathWizardBase.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/SwathWizardBase.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/SwathWizardBase.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/SwathWizardBase.h:73:27: note: by 'OpenMS::SwathWizardBase& OpenMS::SwathWizardBase::operator=(const OpenMS::SwathWizardBase&)' 73 | class OPENMS_GUI_DLLAPI SwathWizardBase : | ^~~~~~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 88%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/TOPPASBase.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/TOPPASBase.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/TOPPASBase.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/TOPPASBase.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPASBase.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPASBase.h:79:27: note: by 'OpenMS::TOPPASBase& OpenMS::TOPPASBase::operator=(const OpenMS::TOPPASBase&)' 79 | class OPENMS_GUI_DLLAPI TOPPASBase : | ^~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp: In static member function 'static OpenMS::TOPPASTreeView* OpenMS::TOPPASBase::createTOPPToolsTreeWidget(QWidget*)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp:485:52: warning: 'QList QSet::toList() const [with T = QString]' is deprecated: Use values() instead. [-Wdeprecated-declarations] 485 | QStringList category_list = category_set.toList(); | ~~~~~~~~~~~~~~~~~~~^~ In file included from /usr/include/qt5/QtCore/qitemselectionmodel.h:45, from /usr/include/qt5/QtWidgets/qabstractitemview.h:46, from /usr/include/qt5/QtWidgets/qtreeview.h:44, from /usr/include/qt5/QtWidgets/qtreewidget.h:44, from /usr/include/qt5/QtWidgets/QTreeWidget:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TOPPASTreeView.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPASBase.h:43: /usr/include/qt5/QtCore/qset.h:265:14: note: declared here 265 | QList toList() const { return values(); } | ^~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp:486:10: warning: 'void qSort(Container&) [with Container = QStringList]' is deprecated: Use std::sort [-Wdeprecated-declarations] 486 | qSort(category_list); | ~~~~~^~~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtCore/qlist.h:43, from /usr/include/qt5/QtCore/qobject.h:49, from /usr/include/qt5/QtWidgets/qwidget.h:45, from /usr/include/qt5/QtWidgets/qframe.h:44, from /usr/include/qt5/QtWidgets/qabstractscrollarea.h:44, from /usr/include/qt5/QtWidgets/qmdiarea.h:44, from /usr/include/qt5/QtWidgets/QMdiArea:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/EnhancedWorkspace.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPASBase.h:42: /usr/include/qt5/QtCore/qalgorithms.h:188:46: note: declared here 188 | QT_DEPRECATED_X("Use std::sort") inline void qSort(Container &c) | ^~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp: In member function 'void OpenMS::TOPPASBase::openFilesInTOPPView(QStringList)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp:1513:94: warning: 'QString::SkipEmptyParts' is deprecated [-Wdeprecated-declarations] 1513 | files = files.join("#SpLiT_sTrInG#+#SpLiT_sTrInG#").split("#SpLiT_sTrInG#", QString::SkipEmptyParts); | ^~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtCore/qobject.h:47: /usr/include/qt5/QtCore/qstring.h:605:9: note: declared here 605 | SkipEmptyParts Q_DECL_ENUMERATOR_DEPRECATED | ^~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp:1513:94: warning: 'QString::SkipEmptyParts' is deprecated [-Wdeprecated-declarations] 1513 | files = files.join("#SpLiT_sTrInG#+#SpLiT_sTrInG#").split("#SpLiT_sTrInG#", QString::SkipEmptyParts); | ^~~~~~~~~~~~~~ /usr/include/qt5/QtCore/qstring.h:605:9: note: declared here 605 | SkipEmptyParts Q_DECL_ENUMERATOR_DEPRECATED | ^~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp:1513:66: warning: 'QStringList QString::split(const QString&, SplitBehavior, Qt::CaseSensitivity) const' is deprecated: Use split(const QString &sep, Qt::SplitBehavior ...) variant instead [-Wdeprecated-declarations] 1513 | files = files.join("#SpLiT_sTrInG#+#SpLiT_sTrInG#").split("#SpLiT_sTrInG#", QString::SkipEmptyParts); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtCore/qstring.h:609:17: note: declared here 609 | QStringList split(const QString &sep, SplitBehavior behavior, | ^~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 88%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 88%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/DataFilterDialog.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/DataFilterDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/DataFilterDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/DataFilterDialog.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/DataFilterDialog.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 88%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPViewBase.h:48, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPViewBase.h:42: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:135:27: note: by 'OpenMS::PlotCanvas& OpenMS::PlotCanvas::operator=(const OpenMS::PlotCanvas&)' 135 | class OPENMS_GUI_DLLAPI PlotCanvas : | ^~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPViewBase.h:124:27: note: by 'OpenMS::TOPPViewBase& OpenMS::TOPPViewBase::operator=(const OpenMS::TOPPViewBase&)' 124 | class OPENMS_GUI_DLLAPI TOPPViewBase : | ^~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:87:35: note: by 'OpenMS::TheoreticalSpectrumGenerator& OpenMS::TheoreticalSpectrumGenerator::operator=(const OpenMS::TheoreticalSpectrumGenerator&)' 87 | TheoreticalSpectrumGenerator& operator=(const TheoreticalSpectrumGenerator& tsg); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp:76: /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot1DCanvas.h:70:27: note: by 'OpenMS::Plot1DCanvas& OpenMS::Plot1DCanvas::operator=(const OpenMS::Plot1DCanvas&)' 70 | class OPENMS_GUI_DLLAPI Plot1DCanvas : | ^~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp:78: /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot2DCanvas.h:70:27: note: by 'OpenMS::Plot2DCanvas& OpenMS::Plot2DCanvas::operator=(const OpenMS::Plot2DCanvas&)' 70 | class OPENMS_GUI_DLLAPI Plot2DCanvas : | ^~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp:80: /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot3DCanvas.h:66:27: note: by 'OpenMS::Plot3DCanvas& OpenMS::Plot3DCanvas::operator=(const OpenMS::Plot3DCanvas&)' 66 | class OPENMS_GUI_DLLAPI Plot3DCanvas : | ^~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp:83: /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/SpectraIDViewTab.h:59:27: note: by 'OpenMS::SpectraIDViewTab& OpenMS::SpectraIDViewTab::operator=(const OpenMS::SpectraIDViewTab&)' 59 | class OPENMS_GUI_DLLAPI SpectraIDViewTab : | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp: In constructor 'OpenMS::TOPPViewBase::TOPPViewBase(TOOL_SCAN, QWidget*)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp:132:68: warning: 'const QRect QDesktopWidget::screenGeometry(int) const' is deprecated: Use QGuiApplication::screens() [-Wdeprecated-declarations] 132 | QRect screen_geometry = QApplication::desktop()->screenGeometry(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /usr/include/qt5/QtWidgets/QtWidgets:58, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:48: /usr/include/qt5/QtWidgets/qdesktopwidget.h:79:67: note: declared here 79 | QT_DEPRECATED_X("Use QGuiApplication::screens()") const QRect screenGeometry(int screen = -1) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TableView.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/SpectraIDViewTab.h:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/MISC/CommonDefs.h:46:84: warning: 'void QButtonGroup::buttonClicked(int)' is deprecated: Use QButtonGroup::idClicked(int) instead [-Wdeprecated-declarations] 46 | #define CONNECTCAST(class,func,args) static_cast(&class::func) | ^ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp:234:38: note: in expansion of macro 'CONNECTCAST' 234 | connect(intensity_button_group_, CONNECTCAST(QButtonGroup,buttonClicked,(int)), this, &TOPPViewBase::setIntensityMode); | ^~~~~~~~~~~ In file included from /usr/include/qt5/QtWidgets/QtWidgets:27: /usr/include/qt5/QtWidgets/qbuttongroup.h:90:10: note: declared here 90 | void buttonClicked(int); | ^~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/MISC/CommonDefs.h:46:84: warning: 'void QButtonGroup::buttonClicked(int)' is deprecated: Use QButtonGroup::idClicked(int) instead [-Wdeprecated-declarations] 46 | #define CONNECTCAST(class,func,args) static_cast(&class::func) | ^ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp:234:38: note: in expansion of macro 'CONNECTCAST' 234 | connect(intensity_button_group_, CONNECTCAST(QButtonGroup,buttonClicked,(int)), this, &TOPPViewBase::setIntensityMode); | ^~~~~~~~~~~ /usr/include/qt5/QtWidgets/qbuttongroup.h:90:10: note: declared here 90 | void buttonClicked(int); | ^~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/MISC/CommonDefs.h:46:84: warning: 'void QButtonGroup::buttonClicked(int)' is deprecated: Use QButtonGroup::idClicked(int) instead [-Wdeprecated-declarations] 46 | #define CONNECTCAST(class,func,args) static_cast(&class::func) | ^ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp:269:29: note: in expansion of macro 'CONNECTCAST' 269 | connect(draw_group_1d_, CONNECTCAST(QButtonGroup, buttonClicked, (int)), this, &TOPPViewBase::setDrawMode1D); | ^~~~~~~~~~~ /usr/include/qt5/QtWidgets/qbuttongroup.h:90:10: note: declared here 90 | void buttonClicked(int); | ^~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/MISC/CommonDefs.h:46:84: warning: 'void QButtonGroup::buttonClicked(int)' is deprecated: Use QButtonGroup::idClicked(int) instead [-Wdeprecated-declarations] 46 | #define CONNECTCAST(class,func,args) static_cast(&class::func) | ^ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp:269:29: note: in expansion of macro 'CONNECTCAST' 269 | connect(draw_group_1d_, CONNECTCAST(QButtonGroup, buttonClicked, (int)), this, &TOPPViewBase::setDrawMode1D); | ^~~~~~~~~~~ /usr/include/qt5/QtWidgets/qbuttongroup.h:90:10: note: declared here 90 | void buttonClicked(int); | ^~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp: In member function 'OpenMS::PlotWidget* OpenMS::TOPPViewBase::getActivePlotWidget() const': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp:1493:14: warning: comparison of integer expressions of different signedness: 'const int' and 'OpenMS::Size' {aka 'long unsigned int'} [-Wsign-compare] 1493 | if (id < (Size) ws_.subWindowList().size()) | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp: In member function 'void OpenMS::TOPPViewBase::runTOPPTool_()': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp:1853:24: warning: 'int QTime::restart()' is deprecated: Use QElapsedTimer instead [-Wdeprecated-declarations] 1853 | topp_.timer.restart(); | ~~~~~~~~~~~~~~~~~~~^~ In file included from /usr/include/qt5/QtCore/QDate:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DateTime.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/DataProcessing.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/SpectrumSettings.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/DataFilters.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/FilterList.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPViewBase.h:46: /usr/include/qt5/QtCore/qdatetime.h:236:54: note: declared here 236 | QT_DEPRECATED_X("Use QElapsedTimer instead") int restart(); | ^~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp: In member function 'void OpenMS::TOPPViewBase::finishTOPPToolExecution(int, QProcess::ExitStatus)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp:1892:79: warning: 'int QTime::elapsed() const' is deprecated: Use QElapsedTimer instead [-Wdeprecated-declarations] 1892 | QString("Execution time: %1 ms").arg(topp_.timer.elapsed())); | ~~~~~~~~~~~~~~~~~~~^~ /usr/include/qt5/QtCore/qdatetime.h:237:54: note: declared here 237 | QT_DEPRECATED_X("Use QElapsedTimer instead") int elapsed() const; | ^~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 88%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/FeatureEditDialog.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include 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make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 89%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/ListFilterDialog.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include 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/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/PythonModuleRequirement.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 89%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/PythonSelector.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/PythonSelector.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/PythonSelector.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/PythonSelector.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/PythonSelector.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 88%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/LayerStatisticsDialog.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/LayerStatisticsDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/LayerStatisticsDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/LayerStatisticsDialog.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/LayerStatisticsDialog.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotWidget.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/LayerStatisticsDialog.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /usr/include/qt5/QtCore/qglobal.h:142, from /usr/include/qt5/QtGui/qtguiglobal.h:43, from /usr/include/qt5/QtWidgets/qtwidgetsglobal.h:43, from /usr/include/qt5/QtWidgets/qdialog.h:43, from /usr/include/qt5/QtWidgets/QDialog:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/LayerStatisticsDialog.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/LayerStatisticsDialog.cpp:36: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:45: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:135:27: note: by 'OpenMS::PlotCanvas& OpenMS::PlotCanvas::operator=(const OpenMS::PlotCanvas&)' 135 | class OPENMS_GUI_DLLAPI PlotCanvas : | ^~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 89%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Plot1DGoToDialog.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Plot1DGoToDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Plot1DGoToDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Plot1DGoToDialog.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/Plot1DGoToDialog.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 89%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SaveImageDialog.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SaveImageDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SaveImageDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SaveImageDialog.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/SaveImageDialog.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 89%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Plot1DPrefDialog.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Plot1DPrefDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Plot1DPrefDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Plot1DPrefDialog.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/Plot1DPrefDialog.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 89%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Plot2DGoToDialog.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Plot2DGoToDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Plot2DGoToDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Plot2DGoToDialog.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/Plot2DGoToDialog.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 89%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Plot2DPrefDialog.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Plot2DPrefDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Plot2DPrefDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Plot2DPrefDialog.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/Plot2DPrefDialog.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 89%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Plot3DPrefDialog.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Plot3DPrefDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Plot3DPrefDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Plot3DPrefDialog.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/Plot3DPrefDialog.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 89%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SwathTabWidget.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SwathTabWidget.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SwathTabWidget.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SwathTabWidget.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/SwathTabWidget.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 89%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SpectrumAlignmentDialog.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SpectrumAlignmentDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SpectrumAlignmentDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SpectrumAlignmentDialog.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/SpectrumAlignmentDialog.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotWidget.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot1DWidget.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/SpectrumAlignmentDialog.cpp:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /usr/include/qt5/QtCore/qglobal.h:142, from /usr/include/qt5/QtGui/qtguiglobal.h:43, from /usr/include/qt5/QtWidgets/qtwidgetsglobal.h:43, from /usr/include/qt5/QtWidgets/qdialog.h:43, from /usr/include/qt5/QtWidgets/QDialog:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/SpectrumAlignmentDialog.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/SpectrumAlignmentDialog.cpp:36: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:45: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:135:27: note: by 'OpenMS::PlotCanvas& OpenMS::PlotCanvas::operator=(const OpenMS::PlotCanvas&)' 135 | class OPENMS_GUI_DLLAPI PlotCanvas : | ^~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot1DWidget.h:45: /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot1DCanvas.h:70:27: note: by 'OpenMS::Plot1DCanvas& OpenMS::Plot1DCanvas::operator=(const OpenMS::Plot1DCanvas&)' 70 | class OPENMS_GUI_DLLAPI Plot1DCanvas : | ^~~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASInputFileDialog.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASInputFileDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASInputFileDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASInputFileDialog.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/TOPPASInputFileDialog.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 89%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASIOMappingDialog.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASIOMappingDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASIOMappingDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASIOMappingDialog.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/TOPPASIOMappingDialog.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASInputFilesDialog.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASInputFilesDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASInputFilesDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASInputFilesDialog.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/TOPPASInputFilesDialog.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASOutputFilesDialog.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASOutputFilesDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASOutputFilesDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASOutputFilesDialog.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/TOPPASOutputFilesDialog.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASVertexNameDialog.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASVertexNameDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASVertexNameDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASVertexNameDialog.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/TOPPASVertexNameDialog.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASToolConfigDialog.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASToolConfigDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASToolConfigDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASToolConfigDialog.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/TOPPASToolConfigDialog.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPViewOpenDialog.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPViewOpenDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPViewOpenDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPViewOpenDialog.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/TOPPViewOpenDialog.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPViewPrefDialog.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPViewPrefDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPViewPrefDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPViewPrefDialog.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/TOPPViewPrefDialog.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/TOPPViewPrefDialog.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:87:35: note: by 'OpenMS::TheoreticalSpectrumGenerator& OpenMS::TheoreticalSpectrumGenerator::operator=(const OpenMS::TheoreticalSpectrumGenerator&)' 87 | TheoreticalSpectrumGenerator& operator=(const TheoreticalSpectrumGenerator& tsg); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/TOPPViewPrefDialog.cpp:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h:84:25: note: by 'OpenMS::SpectrumAlignment& OpenMS::SpectrumAlignment::operator=(const OpenMS::SpectrumAlignment&)' 84 | SpectrumAlignment & operator=(const SpectrumAlignment & source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/INTERFACES/IPeptideIds.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/INTERFACES/IPeptideIds.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/INTERFACES/IPeptideIds.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/INTERFACES/IPeptideIds.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/INTERFACES/IPeptideIds.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/CommonDefs.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/CommonDefs.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/CommonDefs.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/CommonDefs.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/MISC/CommonDefs.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/ExternalProcessMBox.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/ExternalProcessMBox.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/ExternalProcessMBox.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/ExternalProcessMBox.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/MISC/ExternalProcessMBox.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/FilterableList.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/FilterableList.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/FilterableList.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/FilterableList.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/MISC/FilterableList.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/MISC/FilterableList.cpp: In member function 'void OpenMS::Internal::FilterableList::setBlacklistItems(const QStringList&)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/MISC/FilterableList.cpp:72:34: warning: 'QSet QList::toSet() const [with T = QString]' is deprecated: Use QSet(list.begin(), list.end()) instead. [-Wdeprecated-declarations] 72 | blacklist_ = bl_items.toSet(); | ~~~~~~~~~~~~~~^~ In file included from /usr/include/qt5/QtCore/qhash.h:46, from /usr/include/qt5/QtCore/qset.h:43, from /usr/include/qt5/QtCore/QSet:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/MISC/FilterableList.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/MISC/FilterableList.cpp:35: /usr/include/qt5/QtCore/qlist.h:413:13: note: declared here 413 | QSet toSet() const; | ^~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/MISC/FilterableList.cpp: In member function 'void OpenMS::Internal::FilterableList::addBlackListItems(const QStringList&)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/MISC/FilterableList.cpp:78:35: warning: 'QSet QList::toSet() const [with T = QString]' is deprecated: Use QSet(list.begin(), list.end()) instead. [-Wdeprecated-declarations] 78 | blacklist_.unite(items.toSet()); | ~~~~~~~~~~~^~ /usr/include/qt5/QtCore/qset.h:406:30: note: declared here 406 | Q_OUTOFLINE_TEMPLATE QSet QList::toSet() const | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/MISC/FilterableList.cpp: In member function 'void OpenMS::Internal::FilterableList::removeBlackListItems(const QStringList&)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/MISC/FilterableList.cpp:85:59: warning: 'QSet QList::toSet() const [with T = QString]' is deprecated: Use QSet(list.begin(), list.end()) instead. [-Wdeprecated-declarations] 85 | for (const auto& bl : outdated_blacklist_items.toSet()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /usr/include/qt5/QtCore/qset.h:406:30: note: declared here 406 | Q_OUTOFLINE_TEMPLATE QSet QList::toSet() const | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/ToolsDialog.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/ToolsDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/ToolsDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/ToolsDialog.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/ToolsDialog.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/ToolsDialog.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/ToolsDialog.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/ToolsDialog.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/GUIHelpers.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/GUIHelpers.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/GUIHelpers.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/GUIHelpers.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/MISC/GUIHelpers.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/MISC/GUIHelpers.cpp: In function 'QRectF OpenMS::GUIHelpers::getTextDimension(const QStringList&, const QFont&, int&)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/MISC/GUIHelpers.cpp:181:48: warning: 'int QFontMetrics::width(const QString&, int) const' is deprecated: Use QFontMetrics::horizontalAdvance [-Wdeprecated-declarations] 181 | width = std::max(width, 4 + metrics.width(text[i])); | ~~~~~~~~~~~~~^~~~~~~~~ In file included from /usr/include/qt5/QtWidgets/qwidget.h:50, from /usr/include/qt5/QtWidgets/qdialog.h:44, from /usr/include/qt5/QtWidgets/qmessagebox.h:45, from /usr/include/qt5/QtWidgets/QMessageBox:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/MISC/GUIHelpers.cpp:43: /usr/include/qt5/QtGui/qfontmetrics.h:106:9: note: declared here 106 | int width(const QString &, int len = -1) const; | ^~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/AcquisitionInfoVisualizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/AcquisitionInfoVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/AcquisitionInfoVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/AcquisitionInfoVisualizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/AcquisitionInfoVisualizer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/BaseVisualizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/BaseVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/BaseVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/BaseVisualizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/BaseVisualizer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/AcquisitionVisualizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/AcquisitionVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/AcquisitionVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/AcquisitionVisualizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/AcquisitionVisualizer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/BaseVisualizerGUI.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/BaseVisualizerGUI.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/BaseVisualizerGUI.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/BaseVisualizerGUI.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/BaseVisualizerGUI.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ContactPersonVisualizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ContactPersonVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ContactPersonVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ContactPersonVisualizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/ContactPersonVisualizer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DigestionVisualizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DigestionVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DigestionVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DigestionVisualizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/DigestionVisualizer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DataProcessingVisualizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DataProcessingVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DataProcessingVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DataProcessingVisualizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/DataProcessingVisualizer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DocumentIdentifierVisualizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DocumentIdentifierVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DocumentIdentifierVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DocumentIdentifierVisualizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/DocumentIdentifierVisualizer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/GradientVisualizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/GradientVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/GradientVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/GradientVisualizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/GradientVisualizer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/MetaDataBrowser.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/list:62, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/Sample.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ExperimentalSettings.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/HPLCVisualizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/HPLCVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/HPLCVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/HPLCVisualizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/HPLCVisualizer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/InstrumentSettingsVisualizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/InstrumentSettingsVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/InstrumentSettingsVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/InstrumentSettingsVisualizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/InstrumentSettingsVisualizer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 93%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/InstrumentVisualizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/InstrumentVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/InstrumentVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/InstrumentVisualizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/InstrumentVisualizer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 93%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/IonDetectorVisualizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/IonDetectorVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/IonDetectorVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/IonDetectorVisualizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/IonDetectorVisualizer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 93%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/IonSourceVisualizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/IonSourceVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/IonSourceVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/IonSourceVisualizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/IonSourceVisualizer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 93%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MassAnalyzerVisualizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MassAnalyzerVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MassAnalyzerVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MassAnalyzerVisualizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/MassAnalyzerVisualizer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 93%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MetaInfoDescriptionVisualizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MetaInfoDescriptionVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MetaInfoDescriptionVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MetaInfoDescriptionVisualizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/MetaInfoDescriptionVisualizer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 93%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MetaInfoVisualizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MetaInfoVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MetaInfoVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MetaInfoVisualizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/MetaInfoVisualizer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 93%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ModificationVisualizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ModificationVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ModificationVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ModificationVisualizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/ModificationVisualizer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 93%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PeptideHitVisualizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PeptideHitVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PeptideHitVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PeptideHitVisualizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/PeptideHitVisualizer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 93%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PrecursorVisualizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PrecursorVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PrecursorVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PrecursorVisualizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/PrecursorVisualizer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 93%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/MetaDataBrowser.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/PeptideHit.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/PeptideIdentification.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 93%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProteinHitVisualizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProteinHitVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProteinHitVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProteinHitVisualizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/ProteinHitVisualizer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 93%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SampleVisualizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SampleVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SampleVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SampleVisualizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/SampleVisualizer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 93%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/MetaDataBrowser.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ProteinHit.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ProteinIdentification.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.cpp:36: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ScanWindowVisualizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ScanWindowVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ScanWindowVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ScanWindowVisualizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/ScanWindowVisualizer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SoftwareVisualizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SoftwareVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SoftwareVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SoftwareVisualizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/SoftwareVisualizer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SourceFileVisualizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SourceFileVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SourceFileVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SourceFileVisualizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/SourceFileVisualizer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SpectrumSettingsVisualizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SpectrumSettingsVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SpectrumSettingsVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SpectrumSettingsVisualizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/SpectrumSettingsVisualizer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/TaggingVisualizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/TaggingVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/TaggingVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/TaggingVisualizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/TaggingVisualizer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProductVisualizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProductVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProductVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProductVisualizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/ProductVisualizer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisPainter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisPainter.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisPainter.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisPainter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/AxisPainter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISITORS/LayerStatistics.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISITORS/LayerStatistics.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISITORS/LayerStatistics.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISITORS/LayerStatistics.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISITORS/LayerStatistics.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISITORS/LayerStatistics.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/MATH/STATISTICS/Histogram.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISITORS/LayerStatistics.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISITORS/LayerStatistics.cpp:36: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisTickCalculator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisTickCalculator.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisTickCalculator.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisTickCalculator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/AxisTickCalculator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ColorSelector.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ColorSelector.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ColorSelector.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ColorSelector.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ColorSelector.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisWidget.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisWidget.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisWidget.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisWidget.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/AxisWidget.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DataSelectionTabs.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DataSelectionTabs.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DataSelectionTabs.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DataSelectionTabs.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DataSelectionTabs.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DIATreeTab.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DataSelectionTabs.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /usr/include/qt5/QtCore/qglobal.h:142, from /usr/include/qt5/QtGui/qtguiglobal.h:43, from /usr/include/qt5/QtWidgets/qtwidgetsglobal.h:43, from /usr/include/qt5/QtWidgets/qtabwidget.h:43, from /usr/include/qt5/QtWidgets/QTabWidget:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DataSelectionTabs.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DataSelectionTabs.cpp:36: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPViewBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DataSelectionTabs.cpp:41: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPViewBase.h:48: /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:135:27: note: by 'OpenMS::PlotCanvas& OpenMS::PlotCanvas::operator=(const OpenMS::PlotCanvas&)' 135 | class OPENMS_GUI_DLLAPI PlotCanvas : | ^~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPViewBase.h:124:27: note: by 'OpenMS::TOPPViewBase& OpenMS::TOPPViewBase::operator=(const OpenMS::TOPPViewBase&)' 124 | class OPENMS_GUI_DLLAPI TOPPViewBase : | ^~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DataSelectionTabs.cpp:44: /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/SpectraIDViewTab.h:59:27: note: by 'OpenMS::SpectraIDViewTab& OpenMS::SpectraIDViewTab::operator=(const OpenMS::SpectraIDViewTab&)' 59 | class OPENMS_GUI_DLLAPI SpectraIDViewTab : | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DataSelectionTabs.cpp:45: /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot1DCanvas.h:70:27: note: by 'OpenMS::Plot1DCanvas& OpenMS::Plot1DCanvas::operator=(const OpenMS::Plot1DCanvas&)' 70 | class OPENMS_GUI_DLLAPI Plot1DCanvas : | ^~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DataSelectionTabs.cpp:46: /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot2DCanvas.h:70:27: note: by 'OpenMS::Plot2DCanvas& OpenMS::Plot2DCanvas::operator=(const OpenMS::Plot2DCanvas&)' 70 | class OPENMS_GUI_DLLAPI Plot2DCanvas : | ^~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 95%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedTabBar.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedTabBar.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedTabBar.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedTabBar.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/EnhancedTabBar.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 95%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIATreeTab.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIATreeTab.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIATreeTab.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIATreeTab.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIATreeTab.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DIATreeTab.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIATreeTab.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /usr/include/qt5/QtCore/qglobal.h:142, from /usr/include/qt5/QtCore/QtCore:4, from /usr/include/qt5/QtWidgets/QtWidgetsDepends:3, from /usr/include/qt5/QtWidgets/QtWidgets:3, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DIATreeTab.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 95%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedTabBarWidgetInterface.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedTabBarWidgetInterface.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedTabBarWidgetInterface.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedTabBarWidgetInterface.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/EnhancedTabBarWidgetInterface.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 95%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedWorkspace.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedWorkspace.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedWorkspace.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedWorkspace.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/EnhancedWorkspace.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 95%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/GUIProgressLoggerImpl.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/GUIProgressLoggerImpl.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/GUIProgressLoggerImpl.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/GUIProgressLoggerImpl.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/GUIProgressLoggerImpl.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 95%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/FilterList.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/FilterList.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/FilterList.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/FilterList.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/FilterList.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 95%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/InputFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/InputFile.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/InputFile.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/InputFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/InputFile.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/InputFile.cpp: In constructor 'OpenMS::InputFile::InputFile(QWidget*)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/InputFile.cpp:57:48: warning: 'QDirModel::QDirModel(QObject*)' is deprecated: Use QFileSystemModel [-Wdeprecated-declarations] 57 | completer->setModel(new QDirModel(completer)); | ^ In file included from /usr/include/qt5/QtWidgets/QDirModel:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/InputFile.cpp:44: /usr/include/qt5/QtWidgets/qdirmodel.h:73:67: note: declared here 73 | QT_DEPRECATED_VERSION_X_5_15("Use QFileSystemModel") explicit QDirModel(QObject *parent = nullptr); | ^~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 95%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/HistogramWidget.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/HistogramWidget.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/HistogramWidget.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/HistogramWidget.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/HistogramWidget.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 95%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/InputFileList.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/InputFileList.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/InputFileList.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/InputFileList.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/InputFileList.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 95%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerListView.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerListView.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerListView.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerListView.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/LayerListView.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot1DCanvas.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/LayerListView.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /usr/include/qt5/QtCore/qglobal.h:142, from /usr/include/qt5/QtGui/qtguiglobal.h:43, from /usr/include/qt5/QtWidgets/qtwidgetsglobal.h:43, from /usr/include/qt5/QtWidgets/qlistwidget.h:43, from /usr/include/qt5/QtWidgets/QListWidget:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerListView.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/LayerListView.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:45: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:135:27: note: by 'OpenMS::PlotCanvas& OpenMS::PlotCanvas::operator=(const OpenMS::PlotCanvas&)' 135 | class OPENMS_GUI_DLLAPI PlotCanvas : | ^~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot1DCanvas.h:70:27: note: by 'OpenMS::Plot1DCanvas& OpenMS::Plot1DCanvas::operator=(const OpenMS::Plot1DCanvas&)' 70 | class OPENMS_GUI_DLLAPI Plot1DCanvas : | ^~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/LayerListView.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot2DCanvas.h:70:27: note: by 'OpenMS::Plot2DCanvas& OpenMS::Plot2DCanvas::operator=(const OpenMS::Plot2DCanvas&)' 70 | class OPENMS_GUI_DLLAPI Plot2DCanvas : | ^~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/LayerListView.cpp:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot3DCanvas.h:66:27: note: by 'OpenMS::Plot3DCanvas& OpenMS::Plot3DCanvas::operator=(const OpenMS::Plot3DCanvas&)' 66 | class OPENMS_GUI_DLLAPI Plot3DCanvas : | ^~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 95%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataBase.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataBase.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataBase.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataBase.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/LayerDataBase.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/LayerDataBase.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/AccurateMassSearchEngine.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/LayerDataBase.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/AccurateMassSearchEngine.h:206:23: note: by 'OpenMS::AccurateMassSearchEngine& OpenMS::AccurateMassSearchEngine::operator=(const OpenMS::AccurateMassSearchEngine&)' 206 | class OPENMS_DLLAPI AccurateMassSearchEngine : | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/LayerDataBase.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/IDMapper.h:77:15: note: by 'OpenMS::IDMapper& OpenMS::IDMapper::operator=(const OpenMS::IDMapper&)' 77 | IDMapper& operator=(const IDMapper& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/LayerDataBase.cpp: In member function 'void OpenMS::LayerDataBase::updatePeptideHitAnnotations_(OpenMS::PeptideHit&)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/LayerDataBase.cpp:295:71: warning: 'QString::SkipEmptyParts' is deprecated [-Wdeprecated-declarations] 295 | QStringList lines = peak_anno.split(QRegExp("[\r\n]"), QString::SkipEmptyParts); | ^~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtCore/qdatetime.h:44, from /usr/include/qt5/QtCore/QDate:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DateTime.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/DataProcessing.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:43, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40: /usr/include/qt5/QtCore/qstring.h:605:9: note: declared here 605 | SkipEmptyParts Q_DECL_ENUMERATOR_DEPRECATED | ^~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/LayerDataBase.cpp:295:71: warning: 'QString::SkipEmptyParts' is deprecated [-Wdeprecated-declarations] 295 | QStringList lines = peak_anno.split(QRegExp("[\r\n]"), QString::SkipEmptyParts); | ^~~~~~~~~~~~~~ /usr/include/qt5/QtCore/qstring.h:605:9: note: declared here 605 | SkipEmptyParts Q_DECL_ENUMERATOR_DEPRECATED | ^~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/LayerDataBase.cpp:295:42: warning: 'QStringList QString::split(const QRegExp&, SplitBehavior) const' is deprecated: Use split(const QRegularExpression &, Qt::SplitBehavior) variant instead [-Wdeprecated-declarations] 295 | QStringList lines = peak_anno.split(QRegExp("[\r\n]"), QString::SkipEmptyParts); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtCore/qstring.h:622:17: note: declared here 622 | QStringList split(const QRegExp &sep, SplitBehavior behavior) const; | ^~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 95%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataChrom.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataChrom.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataChrom.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataChrom.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/LayerDataChrom.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataChrom.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/LayerDataChrom.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 95%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataConsensus.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataConsensus.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataConsensus.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataConsensus.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/LayerDataConsensus.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataConsensus.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/LayerDataConsensus.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 96%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataFeature.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataFeature.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataFeature.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataFeature.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/LayerDataFeature.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataFeature.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/LayerDataFeature.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 96%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataIdent.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataIdent.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataIdent.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataIdent.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/LayerDataIdent.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataIdent.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/LayerDataIdent.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 96%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ListEditor.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ListEditor.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ListEditor.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ListEditor.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ListEditor.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ListEditor.cpp: In member function 'void OpenMS::Internal::ListTable::createNewRow()': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ListEditor.cpp:334:22: warning: 'void QListWidget::setItemSelected(const QListWidgetItem*, bool)' is deprecated: Use QListWidgetItem::setSelected() instead [-Wdeprecated-declarations] 334 | setItemSelected(item, true); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/qt5/QtWidgets/QListWidget:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/ListEditor.h:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ListEditor.cpp:35: /usr/include/qt5/QtWidgets/qlistwidget.h:263:10: note: declared here 263 | void setItemSelected(const QListWidgetItem *item, bool select); | ^~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 96%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataPeak.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataPeak.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataPeak.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataPeak.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/LayerDataPeak.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataPeak.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/LayerDataPeak.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 96%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LogWindow.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LogWindow.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LogWindow.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LogWindow.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/LogWindow.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 96%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MultiGradient.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MultiGradient.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MultiGradient.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MultiGradient.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/MultiGradient.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 96%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MultiGradientSelector.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MultiGradientSelector.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MultiGradientSelector.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MultiGradientSelector.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/MultiGradientSelector.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 96%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/OutputDirectory.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/OutputDirectory.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/OutputDirectory.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/OutputDirectory.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/OutputDirectory.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/OutputDirectory.cpp: In constructor 'OpenMS::OutputDirectory::OutputDirectory(QWidget*)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/OutputDirectory.cpp:56:51: warning: 'QDirModel::QDirModel(QObject*)' is deprecated: Use QFileSystemModel [-Wdeprecated-declarations] 56 | QDirModel* dir_model = new QDirModel(completer); | ^ In file included from /usr/include/qt5/QtWidgets/QDirModel:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/OutputDirectory.cpp:45: /usr/include/qt5/QtWidgets/qdirmodel.h:73:67: note: declared here 73 | QT_DEPRECATED_VERSION_X_5_15("Use QFileSystemModel") explicit QDirModel(QObject *parent = nullptr); | ^~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 96%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MetaDataBrowser.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MetaDataBrowser.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MetaDataBrowser.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MetaDataBrowser.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/MetaDataBrowser.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/MetaDataBrowser.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/MetaDataBrowser.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 96%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Painter1DBase.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Painter1DBase.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Painter1DBase.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Painter1DBase.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/Painter1DBase.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataPeak.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/Painter1DBase.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot1DCanvas.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/Painter1DBase.cpp:44: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:135:27: note: by 'OpenMS::PlotCanvas& OpenMS::PlotCanvas::operator=(const OpenMS::PlotCanvas&)' 135 | class OPENMS_GUI_DLLAPI PlotCanvas : | ^~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot1DCanvas.h:70:27: note: by 'OpenMS::Plot1DCanvas& OpenMS::Plot1DCanvas::operator=(const OpenMS::Plot1DCanvas&)' 70 | class OPENMS_GUI_DLLAPI Plot1DCanvas : | ^~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/Painter1DBase.cpp:48: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ThresholdMower.h:66:22: note: by 'OpenMS::ThresholdMower& OpenMS::ThresholdMower::operator=(const OpenMS::ThresholdMower&)' 66 | ThresholdMower & operator=(const ThresholdMower & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/Painter1DBase.cpp:49: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NLargest.h:72:16: note: by 'OpenMS::NLargest& OpenMS::NLargest::operator=(const OpenMS::NLargest&)' 72 | NLargest & operator=(const NLargest & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/Painter1DBase.cpp:50: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/WindowMower.h:69:18: note: by 'OpenMS::WindowMower& OpenMS::WindowMower::operator=(const OpenMS::WindowMower&)' 69 | WindowMower& operator=(const WindowMower& source); | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 96%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ParamEditor.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ParamEditor.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ParamEditor.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ParamEditor.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ParamEditor.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ParamEditor.cpp: In member function 'bool OpenMS::Internal::ParamEditorDelegate::exists_(QString, QModelIndex) const': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ParamEditor.cpp:394:34: warning: 'QModelIndex QModelIndex::child(int, int) const' is deprecated: Use QAbstractItemModel::index [-Wdeprecated-declarations] 394 | while (index.parent().child(current_index, 0).isValid()) | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtWidgets/qstyleoption.h:66, from /usr/include/qt5/QtWidgets/qabstractitemdelegate.h:45, from /usr/include/qt5/QtWidgets/qitemdelegate.h:44, from /usr/include/qt5/QtWidgets/QItemDelegate:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/ParamEditor.h:43, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ParamEditor.cpp:35: /usr/include/qt5/QtCore/qabstractitemmodel.h:455:20: note: declared here 455 | inline QModelIndex QModelIndex::child(int arow, int acolumn) const | ^~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ParamEditor.cpp:399:31: warning: 'QModelIndex QModelIndex::child(int, int) const' is deprecated: Use QAbstractItemModel::index [-Wdeprecated-declarations] 399 | index.parent().child(current_index, 0).data(Qt::DisplayRole).toString() == name | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtCore/qabstractitemmodel.h:455:20: note: declared here 455 | inline QModelIndex QModelIndex::child(int arow, int acolumn) const | ^~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ParamEditor.cpp:402:75: warning: 'QModelIndex QModelIndex::child(int, int) const' is deprecated: Use QAbstractItemModel::index [-Wdeprecated-declarations] 402 | (index.data(Qt::UserRole).toInt() == 0 && index.parent().child(current_index, 0).data(Qt::UserRole).toInt() == 0) | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtCore/qabstractitemmodel.h:455:20: note: declared here 455 | inline QModelIndex QModelIndex::child(int arow, int acolumn) const | ^~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ParamEditor.cpp:404:75: warning: 'QModelIndex QModelIndex::child(int, int) const' is deprecated: Use QAbstractItemModel::index [-Wdeprecated-declarations] 404 | (index.data(Qt::UserRole).toInt() != 0 && index.parent().child(current_index, 0).data(Qt::UserRole).toInt() != 0) | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtCore/qabstractitemmodel.h:455:20: note: declared here 455 | inline QModelIndex QModelIndex::child(int arow, int acolumn) const | ^~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ParamEditor.cpp: In member function 'void OpenMS::ParamEditor::load(OpenMS::Param&)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ParamEditor.cpp:523:29: warning: 'void QTreeWidgetItem::setTextColor(int, const QColor&)' is deprecated: Use QTreeWidgetItem::setForeground() instead [-Wdeprecated-declarations] 523 | item->setTextColor(0, Qt::darkGray); // color of nodes with children | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtWidgets/QTreeWidget:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/ParamEditor.h:44: /usr/include/qt5/QtWidgets/qtreewidget.h:156:17: note: declared here 156 | inline void setTextColor(int column, const QColor &color) | ^~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ParamEditor.cpp:557:27: warning: 'void QTreeWidgetItem::setTextColor(int, const QColor&)' is deprecated: Use QTreeWidgetItem::setForeground() instead [-Wdeprecated-declarations] 557 | item->setTextColor(0, QColor(255, 140, 0, 255)); // orange | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtWidgets/qtreewidget.h:156:17: note: declared here 156 | inline void setTextColor(int column, const QColor &color) | ^~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ParamEditor.cpp:558:27: warning: 'void QTreeWidgetItem::setTextColor(int, const QColor&)' is deprecated: Use QTreeWidgetItem::setForeground() instead [-Wdeprecated-declarations] 558 | item->setTextColor(2, QColor(255, 140, 0, 255)); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtWidgets/qtreewidget.h:156:17: note: declared here 156 | inline void setTextColor(int column, const QColor &color) | ^~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ParamEditor.cpp:559:27: warning: 'void QTreeWidgetItem::setTextColor(int, const QColor&)' is deprecated: Use QTreeWidgetItem::setForeground() instead [-Wdeprecated-declarations] 559 | item->setTextColor(3, QColor(255, 140, 0, 255)); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtWidgets/qtreewidget.h:156:17: note: declared here 156 | inline void setTextColor(int column, const QColor &color) | ^~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ParamEditor.cpp:563:27: warning: 'void QTreeWidgetItem::setTextColor(int, const QColor&)' is deprecated: Use QTreeWidgetItem::setForeground() instead [-Wdeprecated-declarations] 563 | item->setTextColor(0, Qt::darkGray); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /usr/include/qt5/QtWidgets/qtreewidget.h:156:17: note: declared here 156 | inline void setTextColor(int column, const QColor &color) | ^~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ParamEditor.cpp:564:27: warning: 'void QTreeWidgetItem::setTextColor(int, const QColor&)' is deprecated: Use QTreeWidgetItem::setForeground() instead [-Wdeprecated-declarations] 564 | item->setTextColor(2, Qt::darkGray); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /usr/include/qt5/QtWidgets/qtreewidget.h:156:17: note: declared here 156 | inline void setTextColor(int column, const QColor &color) | ^~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ParamEditor.cpp:565:27: warning: 'void QTreeWidgetItem::setTextColor(int, const QColor&)' is deprecated: Use QTreeWidgetItem::setForeground() instead [-Wdeprecated-declarations] 565 | item->setTextColor(3, Qt::darkGray); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /usr/include/qt5/QtWidgets/qtreewidget.h:156:17: note: declared here 156 | inline void setTextColor(int column, const QColor &color) | ^~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 96%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot1DWidget.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot1DWidget.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot1DWidget.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot1DWidget.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/Plot1DWidget.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotWidget.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot1DWidget.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/Plot1DWidget.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot1DWidget.h:41: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:45: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:135:27: note: by 'OpenMS::PlotCanvas& OpenMS::PlotCanvas::operator=(const OpenMS::PlotCanvas&)' 135 | class OPENMS_GUI_DLLAPI PlotCanvas : | ^~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot1DWidget.h:45: /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot1DCanvas.h:70:27: note: by 'OpenMS::Plot1DCanvas& OpenMS::Plot1DCanvas::operator=(const OpenMS::Plot1DCanvas&)' 70 | class OPENMS_GUI_DLLAPI Plot1DCanvas : | ^~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 96%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot1DCanvas.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot1DCanvas.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot1DCanvas.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot1DCanvas.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/Plot1DCanvas.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot1DCanvas.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/Plot1DCanvas.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/VersionInfo.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:42: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:45: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:135:27: note: by 'OpenMS::PlotCanvas& OpenMS::PlotCanvas::operator=(const OpenMS::PlotCanvas&)' 135 | class OPENMS_GUI_DLLAPI PlotCanvas : | ^~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot1DCanvas.h:70:27: note: by 'OpenMS::Plot1DCanvas& OpenMS::Plot1DCanvas::operator=(const OpenMS::Plot1DCanvas&)' 70 | class OPENMS_GUI_DLLAPI Plot1DCanvas : | ^~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/Plot1DCanvas.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h:84:25: note: by 'OpenMS::SpectrumAlignment& OpenMS::SpectrumAlignment::operator=(const OpenMS::SpectrumAlignment&)' 84 | SpectrumAlignment & operator=(const SpectrumAlignment & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignmentScore.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/Plot1DCanvas.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignmentScore.h:88:30: note: by 'OpenMS::SpectrumAlignmentScore& OpenMS::SpectrumAlignmentScore::operator=(const OpenMS::SpectrumAlignmentScore&)' 88 | SpectrumAlignmentScore & operator=(const SpectrumAlignmentScore & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/Plot1DCanvas.cpp: In member function 'void OpenMS::Plot1DCanvas::paint(QPainter*, QPaintEvent*)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/Plot1DCanvas.cpp:719:16: warning: 'void QTime::start()' is deprecated: Use QElapsedTimer instead [-Wdeprecated-declarations] 719 | timer.start(); | ~~~~~~~~~~~^~ In file included from /usr/include/qt5/QtCore/QDate:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DateTime.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/DataProcessing.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:43, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40: /usr/include/qt5/QtCore/qdatetime.h:235:55: note: declared here 235 | QT_DEPRECATED_X("Use QElapsedTimer instead") void start(); | ^~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/Plot1DCanvas.cpp:815:51: warning: 'int QTime::elapsed() const' is deprecated: Use QElapsedTimer instead [-Wdeprecated-declarations] 815 | cout << "paint event took " << timer.elapsed() << " ms" << endl; | ~~~~~~~~~~~~~^~ /usr/include/qt5/QtCore/qdatetime.h:237:54: note: declared here 237 | QT_DEPRECATED_X("Use QElapsedTimer instead") int elapsed() const; | ^~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot2DWidget.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot2DWidget.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot2DWidget.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot2DWidget.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/Plot2DWidget.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotWidget.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot1DWidget.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/Plot2DWidget.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot1DWidget.h:41: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:45: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:135:27: note: by 'OpenMS::PlotCanvas& OpenMS::PlotCanvas::operator=(const OpenMS::PlotCanvas&)' 135 | class OPENMS_GUI_DLLAPI PlotCanvas : | ^~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot1DWidget.h:45: /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot1DCanvas.h:70:27: note: by 'OpenMS::Plot1DCanvas& OpenMS::Plot1DCanvas::operator=(const OpenMS::Plot1DCanvas&)' 70 | class OPENMS_GUI_DLLAPI Plot1DCanvas : | ^~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot2DWidget.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/Plot2DWidget.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot2DCanvas.h:70:27: note: by 'OpenMS::Plot2DCanvas& OpenMS::Plot2DCanvas::operator=(const OpenMS::Plot2DCanvas&)' 70 | class OPENMS_GUI_DLLAPI Plot2DCanvas : | ^~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot2DCanvas.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot2DCanvas.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot2DCanvas.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot2DCanvas.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/Plot2DCanvas.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot2DCanvas.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/Plot2DCanvas.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/VersionInfo.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:42: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:45: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:135:27: note: by 'OpenMS::PlotCanvas& OpenMS::PlotCanvas::operator=(const OpenMS::PlotCanvas&)' 135 | class OPENMS_GUI_DLLAPI PlotCanvas : | ^~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot2DCanvas.h:42: /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot1DCanvas.h:70:27: note: by 'OpenMS::Plot1DCanvas& OpenMS::Plot1DCanvas::operator=(const OpenMS::Plot1DCanvas&)' 70 | class OPENMS_GUI_DLLAPI Plot1DCanvas : | ^~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot2DCanvas.h:70:27: note: by 'OpenMS::Plot2DCanvas& OpenMS::Plot2DCanvas::operator=(const OpenMS::Plot2DCanvas&)' 70 | class OPENMS_GUI_DLLAPI Plot2DCanvas : | ^~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/Plot2DCanvas.cpp: In member function 'virtual void OpenMS::Plot2DCanvas::paintEvent(QPaintEvent*)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/Plot2DCanvas.cpp:1458:26: warning: 'void QTime::start()' is deprecated: Use QElapsedTimer instead [-Wdeprecated-declarations] 1458 | overall_timer.start(); | ~~~~~~~~~~~~~~~~~~~^~ In file included from /usr/include/qt5/QtCore/QDate:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DateTime.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/DataProcessing.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:43, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40: /usr/include/qt5/QtCore/qdatetime.h:235:55: note: declared here 235 | QT_DEPRECATED_X("Use QElapsedTimer instead") void start(); | ^~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/Plot2DCanvas.cpp:1486:28: warning: 'void QTime::start()' is deprecated: Use QElapsedTimer instead [-Wdeprecated-declarations] 1486 | layer_timer.start(); | ~~~~~~~~~~~~~~~~~^~ /usr/include/qt5/QtCore/qdatetime.h:235:55: note: declared here 235 | QT_DEPRECATED_X("Use QElapsedTimer instead") void start(); | ^~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/Plot2DCanvas.cpp:1530:71: warning: 'int QTime::elapsed() const' is deprecated: Use QElapsedTimer instead [-Wdeprecated-declarations] 1530 | cout << " -layer " << i << " time: " << layer_timer.elapsed() << " ms" << endl; | ~~~~~~~~~~~~~~~~~~~^~ /usr/include/qt5/QtCore/qdatetime.h:237:54: note: declared here 237 | QT_DEPRECATED_X("Use QElapsedTimer instead") int elapsed() const; | ^~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/Plot2DCanvas.cpp:1540:45: warning: 'QVector QRegion::rects() const' is deprecated: Use begin()/end() instead [-Wdeprecated-declarations] 1540 | QVector rects = e->region().rects(); | ~~~~~~~~~~~~~~~~~^~ In file included from /usr/include/qt5/QtGui/qmatrix.h:45, from /usr/include/qt5/QtGui/qbrush.h:49, from /usr/include/qt5/QtGui/qpen.h:45, from /usr/include/qt5/QtGui/QPen:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotations1DContainer.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:51: /usr/include/qt5/QtGui/qregion.h:125:20: note: declared here 125 | QVector rects() const; | ^~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/Plot2DCanvas.cpp:1638:59: warning: 'int QTime::elapsed() const' is deprecated: Use QElapsedTimer instead [-Wdeprecated-declarations] 1638 | cout << " -overall time: " << overall_timer.elapsed() << " ms" << endl << endl; | ~~~~~~~~~~~~~~~~~~~~~^~ /usr/include/qt5/QtCore/qdatetime.h:237:54: note: declared here 237 | QT_DEPRECATED_X("Use QElapsedTimer instead") int elapsed() const; | ^~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot3DCanvas.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot3DCanvas.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot3DCanvas.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot3DCanvas.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/Plot3DCanvas.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot3DCanvas.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/Plot3DCanvas.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/VersionInfo.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:42: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:45: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:135:27: note: by 'OpenMS::PlotCanvas& OpenMS::PlotCanvas::operator=(const OpenMS::PlotCanvas&)' 135 | class OPENMS_GUI_DLLAPI PlotCanvas : | ^~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot3DCanvas.h:66:27: note: by 'OpenMS::Plot3DCanvas& OpenMS::Plot3DCanvas::operator=(const OpenMS::Plot3DCanvas&)' 66 | class OPENMS_GUI_DLLAPI Plot3DCanvas : | ^~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot3DOpenGLCanvas.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot3DOpenGLCanvas.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot3DOpenGLCanvas.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot3DOpenGLCanvas.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/Plot3DOpenGLCanvas.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot3DCanvas.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/Plot3DOpenGLCanvas.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /usr/include/qt5/QtCore/qglobal.h:142, from /usr/include/qt5/QtGui/qtguiglobal.h:43, from /usr/include/qt5/QtWidgets/qtwidgetsglobal.h:43, from /usr/include/qt5/QtWidgets/qopenglwidget.h:43, from /usr/include/qt5/QtWidgets/QOpenGLWidget:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot3DOpenGLCanvas.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/Plot3DOpenGLCanvas.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:45: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:135:27: note: by 'OpenMS::PlotCanvas& OpenMS::PlotCanvas::operator=(const OpenMS::PlotCanvas&)' 135 | class OPENMS_GUI_DLLAPI PlotCanvas : | ^~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot3DCanvas.h:66:27: note: by 'OpenMS::Plot3DCanvas& OpenMS::Plot3DCanvas::operator=(const OpenMS::Plot3DCanvas&)' 66 | class OPENMS_GUI_DLLAPI Plot3DCanvas : | ^~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot3DWidget.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot3DWidget.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot3DWidget.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot3DWidget.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/Plot3DWidget.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotWidget.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot3DWidget.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/Plot3DWidget.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /usr/include/c++/13/bits/locale_classes.h:40, from /usr/include/c++/13/bits/ios_base.h:41, from /usr/include/c++/13/ios:44, from /usr/include/c++/13/ostream:40, from /usr/include/c++/13/iostream:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/Plot3DWidget.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:45: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:135:27: note: by 'OpenMS::PlotCanvas& OpenMS::PlotCanvas::operator=(const OpenMS::PlotCanvas&)' 135 | class OPENMS_GUI_DLLAPI PlotCanvas : | ^~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot3DWidget.h:41: /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot3DCanvas.h:66:27: note: by 'OpenMS::Plot3DCanvas& OpenMS::Plot3DCanvas::operator=(const OpenMS::Plot3DCanvas&)' 66 | class OPENMS_GUI_DLLAPI Plot3DCanvas : | ^~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/PlotWidget.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/PlotWidget.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/PlotWidget.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/PlotWidget.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/PlotWidget.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotWidget.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/PlotWidget.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/MATH/STATISTICS/Histogram.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotWidget.h:42: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:45: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:135:27: note: by 'OpenMS::PlotCanvas& OpenMS::PlotCanvas::operator=(const OpenMS::PlotCanvas&)' 135 | class OPENMS_GUI_DLLAPI PlotCanvas : | ^~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/RecentFilesMenu.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/RecentFilesMenu.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/RecentFilesMenu.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/RecentFilesMenu.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/RecentFilesMenu.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/PlotCanvas.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/PlotCanvas.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/PlotCanvas.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/PlotCanvas.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/PlotCanvas.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataChrom.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/PlotCanvas.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/LogStream.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/PlotCanvas.cpp:36: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/PlotCanvas.cpp:46: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:135:27: note: by 'OpenMS::PlotCanvas& OpenMS::PlotCanvas::operator=(const OpenMS::PlotCanvas&)' 135 | class OPENMS_GUI_DLLAPI PlotCanvas : | ^~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/PlotCanvas.cpp: In member function 'virtual void OpenMS::PlotCanvas::wheelEvent(QWheelEvent*)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/PlotCanvas.cpp:181:15: warning: 'int QWheelEvent::x() const' is deprecated: Use position() [-Wdeprecated-declarations] 181 | zoom_(e->x(), e->y(), e->delta() > 0); | ~~~~^~ In file included from /usr/include/qt5/QtGui/qtextlayout.h:49, from /usr/include/qt5/QtGui/qabstracttextdocumentlayout.h:45, from /usr/include/qt5/QtGui/QtGui:5, from /usr/include/qt5/QtWidgets/QtWidgetsDepends:4, from /usr/include/qt5/QtWidgets/QtWidgets:3, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/AxisWidget.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/PlotCanvas.cpp:38: /usr/include/qt5/QtGui/qevent.h:229:16: note: declared here 229 | inline int x() const { return int(p.x()); } | ^ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/PlotCanvas.cpp:181:23: warning: 'int QWheelEvent::y() const' is deprecated: Use position() [-Wdeprecated-declarations] 181 | zoom_(e->x(), e->y(), e->delta() > 0); | ~~~~^~ /usr/include/qt5/QtGui/qevent.h:231:16: note: declared here 231 | inline int y() const { return int(p.y()); } | ^ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/PlotCanvas.cpp:181:35: warning: 'int QWheelEvent::delta() const' is deprecated: Use angleDelta() [-Wdeprecated-declarations] 181 | zoom_(e->x(), e->y(), e->delta() > 0); | ~~~~~~~~^~ /usr/include/qt5/QtGui/qevent.h:219:16: note: declared here 219 | inline int delta() const { return qt4D; } | ^~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SequenceVisualizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SequenceVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SequenceVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SequenceVisualizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/SequenceVisualizer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectraTreeTab.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectraTreeTab.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectraTreeTab.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectraTreeTab.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/SpectraTreeTab.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/SpectraTreeTab.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/SpectraTreeTab.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /usr/include/qt5/QtCore/qglobal.h:142, from /usr/include/qt5/QtCore/QtCore:4, from /usr/include/qt5/QtWidgets/QtWidgetsDepends:3, from /usr/include/qt5/QtWidgets/QtWidgets:3, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/SpectraTreeTab.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/range/size.hpp:23, from /usr/include/boost/range/functions.hpp:20, from /usr/include/boost/range/iterator_range_core.hpp:38, from /usr/include/boost/range/iterator_range.hpp:13, from /usr/include/boost/range/adaptor/reversed.hpp:14, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ID/AppliedProcessingStep.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ID/ScoredProcessingResult.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ID/IdentifiedCompound.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ID/IdentificationData.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/BaseFeature.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:46: /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/SpectraTreeTab.cpp: In constructor 'OpenMS::SpectraTreeTab::SpectraTreeTab(QWidget*)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/SpectraTreeTab.cpp:115:33: warning: comparison between 'enum OpenMS::ClmnPeak::HeaderNames' and 'enum OpenMS::ClmnChrom::HeaderNames' [-Wenum-compare] 115 | assert(ClmnPeak::SPEC_INDEX == ClmnChrom::CHROM_INDEX); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/SpectraTreeTab.cpp: In member function 'void OpenMS::SpectraTreeTab::itemSelectionChange_(QTreeWidgetItem*, QTreeWidgetItem*)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/SpectraTreeTab.cpp:190:88: warning: unused parameter 'previous' [-Wunused-parameter] 190 | void SpectraTreeTab::itemSelectionChange_(QTreeWidgetItem* current, QTreeWidgetItem* previous) | ~~~~~~~~~~~~~~~~~^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectraIDViewTab.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectraIDViewTab.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectraIDViewTab.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectraIDViewTab.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/SpectraIDViewTab.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/SpectraIDViewTab.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/SpectraIDViewTab.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /usr/include/qt5/QtCore/qglobal.h:142, from /usr/include/qt5/QtGui/qtguiglobal.h:43, from /usr/include/qt5/QtWidgets/qtwidgetsglobal.h:43, from /usr/include/qt5/QtWidgets/qtabwidget.h:43, from /usr/include/qt5/QtWidgets/QTabWidget:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DataSelectionTabs.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/SpectraIDViewTab.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/SpectraIDViewTab.h:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/SpectraIDViewTab.h:59:27: note: by 'OpenMS::SpectraIDViewTab& OpenMS::SpectraIDViewTab::operator=(const OpenMS::SpectraIDViewTab&)' 59 | class OPENMS_GUI_DLLAPI SpectraIDViewTab : | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/SpectraIDViewTab.cpp:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:87:35: note: by 'OpenMS::TheoreticalSpectrumGenerator& OpenMS::TheoreticalSpectrumGenerator::operator=(const OpenMS::TheoreticalSpectrumGenerator&)' 87 | TheoreticalSpectrumGenerator& operator=(const TheoreticalSpectrumGenerator& tsg); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/SpectraIDViewTab.cpp:41: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h:84:25: note: by 'OpenMS::SpectrumAlignment& OpenMS::SpectrumAlignment::operator=(const OpenMS::SpectrumAlignment&)' 84 | SpectrumAlignment & operator=(const SpectrumAlignment & source); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/SpectraIDViewTab.cpp: In member function 'void OpenMS::SpectraIDViewTab::proteinCellClicked_(int, int)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/SpectraIDViewTab.cpp:355:35: warning: comparison of integer expressions of different signedness: 'int' and 'OpenMS::Size' {aka 'long unsigned int'} [-Wsign-compare] 355 | for (int i = 0; i < aaseq.size(); ++i) | ~~^~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/SpectraIDViewTab.cpp:324:13: warning: unused variable 'current_identification_index' [-Wunused-variable] 324 | int current_identification_index = item_pepid->data(Qt::DisplayRole).toInt(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/SpectraIDViewTab.cpp:325:13: warning: unused variable 'current_peptide_hit_index' [-Wunused-variable] 325 | int current_peptide_hit_index = table_widget_->item(row, Clmn::PEPHIT_NR)->data(Qt::DisplayRole).toInt(); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/SpectraIDViewTab.cpp: In member function 'void OpenMS::SpectraIDViewTab::currentSpectraSelectionChanged_()': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/SpectraIDViewTab.cpp:400:11: warning: unused variable 'last_spectrum_index' [-Wunused-variable] 400 | int last_spectrum_index = int(layer_->getCurrentSpectrumIndex()); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/SpectraIDViewTab.cpp: In member function 'void OpenMS::SpectraIDViewTab::updatedSingleProteinCell_(QTableWidgetItem*)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/SpectraIDViewTab.cpp:1019:70: warning: unused parameter 'item' [-Wunused-parameter] 1019 | void SpectraIDViewTab::updatedSingleProteinCell_(QTableWidgetItem* item) | ~~~~~~~~~~~~~~~~~~^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/SpectraIDViewTab.cpp: In static member function 'static QString OpenMS::SpectraIDViewTab::extractNumFromAccession_(const QString&)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/SpectraIDViewTab.cpp:254:3: warning: control reaches end of non-void function [-Wreturn-type] 254 | } | ^ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SwathLibraryStats.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SwathLibraryStats.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SwathLibraryStats.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SwathLibraryStats.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/SwathLibraryStats.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TransitionTSVFile.h:43, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TransitionPQPFile.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/SwathLibraryStats.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TransitionTSVFile.h:144:23: note: by 'OpenMS::TransitionTSVFile& OpenMS::TransitionTSVFile::operator=(const OpenMS::TransitionTSVFile&)' 144 | class OPENMS_DLLAPI TransitionTSVFile : | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TransitionPQPFile.h:215:23: note: by 'OpenMS::TransitionPQPFile& OpenMS::TransitionPQPFile::operator=(const OpenMS::TransitionPQPFile&)' 215 | class OPENMS_DLLAPI TransitionPQPFile : | ^~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TableView.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TableView.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TableView.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TableView.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TableView.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TableView.cpp: In member function 'void OpenMS::TableView::hideColumns(const QStringList&)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TableView.cpp:197:35: warning: 'QSet QList::toSet() const [with T = QString]' is deprecated: Use QSet(list.begin(), list.end()) instead. [-Wdeprecated-declarations] 197 | auto hset = header_names.toSet(); | ~~~~~~~~~~~~~~~~~~^~ In file included from /usr/include/qt5/QtCore/qobject.h:49, from /usr/include/qt5/QtWidgets/qwidget.h:45, from /usr/include/qt5/QtWidgets/qframe.h:44, from /usr/include/qt5/QtWidgets/qabstractscrollarea.h:44, from /usr/include/qt5/QtWidgets/qabstractitemview.h:44, from /usr/include/qt5/QtWidgets/qtableview.h:44, from /usr/include/qt5/QtWidgets/qtablewidget.h:44, from /usr/include/qt5/QtWidgets/QTableWidget:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TableView.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TableView.cpp:35: /usr/include/qt5/QtCore/qlist.h:413:13: note: declared here 413 | QSet toSet() const; | ^~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TableView.cpp:214:162: warning: 'QList QSet::toList() const [with T = QString]' is deprecated: Use values() instead. [-Wdeprecated-declarations] 214 | throw Exception::InvalidParameter(__FILE__, __LINE__, OPENMS_PRETTY_FUNCTION, "header_names contains a column name which is unknown: " + String(hset.toList().join(", "))); | ~~~~~~~~~~~^~ In file included from /usr/include/qt5/QtCore/qitemselectionmodel.h:45, from /usr/include/qt5/QtWidgets/qabstractitemview.h:46: /usr/include/qt5/QtCore/qset.h:265:14: note: declared here 265 | QList toList() const { return values(); } | ^~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TableView.cpp: In member function 'QTableWidgetItem* OpenMS::TableView::setAtBottomRow(QTableWidgetItem*, size_t, const QColor&, const QColor&)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TableView.cpp:262:29: warning: 'void QTableWidgetItem::setBackgroundColor(const QColor&)' is deprecated: Use QTableWidgetItem::setBackground() instead [-Wdeprecated-declarations] 262 | item->setBackgroundColor(background); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/qt5/QtWidgets/qtablewidget.h:142:17: note: declared here 142 | inline void setBackgroundColor(const QColor &color) | ^~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASEdge.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASEdge.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASEdge.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASEdge.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASEdge.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASEdge.cpp: In member function 'virtual void OpenMS::TOPPASEdge::paint(QPainter*, const QStyleOptionGraphicsItem*, QWidget*)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASEdge.cpp:215:32: warning: 'int QFontMetrics::width(const QString&, int) const' is deprecated: Use QFontMetrics::horizontalAdvance [-Wdeprecated-declarations] 215 | int text_width=fm.width(str); | ~~~~~~~~^~~~~ In file included from /usr/include/qt5/QtGui/qpainter.h:59, from /usr/include/qt5/QtGui/QPainter:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TOPPASVertex.h:77, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TOPPASToolVertex.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TOPPASScene.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASEdge.cpp:36: /usr/include/qt5/QtGui/qfontmetrics.h:106:9: note: declared here 106 | int width(const QString &, int len = -1) const; | ^~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASEdge.cpp:235:32: warning: 'int QFontMetrics::width(const QString&, int) const' is deprecated: Use QFontMetrics::horizontalAdvance [-Wdeprecated-declarations] 235 | int text_width = fm.width(str); | ~~~~~~~~^~~~~ /usr/include/qt5/QtGui/qfontmetrics.h:106:9: note: declared here 106 | int width(const QString &, int len = -1) const; | ^~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASInputFileListVertex.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASInputFileListVertex.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASInputFileListVertex.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASInputFileListVertex.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASInputFileListVertex.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASMergerVertex.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 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-o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASMergerVertex.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASMergerVertex.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASResource.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASResource.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASResource.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASResource.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASResource.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASResources.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASResources.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASResources.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASResources.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASResources.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASOutputFileListVertex.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASOutputFileListVertex.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASOutputFileListVertex.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASOutputFileListVertex.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASOutputFileListVertex.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASSplitterVertex.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASSplitterVertex.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASSplitterVertex.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASSplitterVertex.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASSplitterVertex.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASScene.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASScene.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASScene.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASScene.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASScene.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASScene.cpp: In member function 'virtual void OpenMS::TOPPASScene::contextMenuEvent(QGraphicsSceneContextMenuEvent*)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASScene.cpp:1854:70: warning: 'QList QSet::toList() const [with T = QString]' is deprecated: Use values() instead. [-Wdeprecated-declarations] 1854 | QList supported_actions = supported_actions_set.toList(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /usr/include/qt5/QtWidgets/qgraphicssceneevent.h:49, from /usr/include/qt5/QtWidgets/QGraphicsSceneMouseEvent:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TOPPASVertex.h:79, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TOPPASToolVertex.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TOPPASScene.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASScene.cpp:35: /usr/include/qt5/QtCore/qset.h:265:14: note: declared here 265 | QList toList() const { return values(); } | ^~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASTreeView.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASTreeView.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASTreeView.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASTreeView.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASTreeView.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASToolVertex.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASToolVertex.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASToolVertex.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASToolVertex.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASToolVertex.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASToolVertex.cpp: In member function 'void OpenMS::TOPPASToolVertex::getParameters_(QVector&, bool) const': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASToolVertex.cpp:344:10: warning: 'void qSort(Container&) [with Container = QVector]' is deprecated: Use std::sort [-Wdeprecated-declarations] 344 | qSort(io_infos); | ~~~~~^~~~~~~~~~ In file included from /usr/include/qt5/QtCore/qlist.h:43, from /usr/include/qt5/QtCore/qstringlist.h:41, from /usr/include/qt5/QtGui/qcolor.h:46, from /usr/include/qt5/QtGui/qpixmap.h:45, from /usr/include/qt5/QtGui/qpainter.h:48, from /usr/include/qt5/QtGui/QPainter:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TOPPASVertex.h:77, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TOPPASToolVertex.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASToolVertex.cpp:35: /usr/include/qt5/QtCore/qalgorithms.h:188:46: note: declared here 188 | QT_DEPRECATED_X("Use std::sort") inline void qSort(Container &c) | ^~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASToolVertex.cpp: In member function 'QString OpenMS::TOPPASToolVertex::toolnameWithWhitespacesForFancyWordWrapping_(QPainter*, const QString&)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASToolVertex.cpp:412:61: warning: 'QString::SkipEmptyParts' is deprecated [-Wdeprecated-declarations] 412 | QStringList parts = str.split(QRegExp("\\s+"), QString::SkipEmptyParts); | ^~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtCore/qhashfunctions.h:44, from /usr/include/qt5/QtCore/qlist.h:47: /usr/include/qt5/QtCore/qstring.h:605:9: note: declared here 605 | SkipEmptyParts Q_DECL_ENUMERATOR_DEPRECATED | ^~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASToolVertex.cpp:412:61: warning: 'QString::SkipEmptyParts' is deprecated [-Wdeprecated-declarations] 412 | QStringList parts = str.split(QRegExp("\\s+"), QString::SkipEmptyParts); | ^~~~~~~~~~~~~~ /usr/include/qt5/QtCore/qstring.h:605:9: note: declared here 605 | SkipEmptyParts Q_DECL_ENUMERATOR_DEPRECATED | ^~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASToolVertex.cpp:412:34: warning: 'QStringList QString::split(const QRegExp&, SplitBehavior) const' is deprecated: Use split(const QRegularExpression &, Qt::SplitBehavior) variant instead [-Wdeprecated-declarations] 412 | QStringList parts = str.split(QRegExp("\\s+"), QString::SkipEmptyParts); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtCore/qstring.h:622:17: note: declared here 622 | QStringList split(const QRegExp &sep, SplitBehavior behavior) const; | ^~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASVertex.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASVertex.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASVertex.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASVertex.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASVertex.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASVertex.cpp: In member function 'void OpenMS::TOPPASVertex::paint(QPainter*, const QStyleOptionGraphicsItem*, QWidget*, bool)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASVertex.cpp:211:24: warning: 'void QPainterPath::addRoundRect(const QRectF&, int)' is deprecated: Use addRoundedRect(..., Qt::RelativeSize) instead [-Wdeprecated-declarations] 211 | path.addRoundRect(boundingRect().marginsRemoved(QMarginsF(1, 1, 1, 1)), 20); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtGui/QPainterPath:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TOPPASVertex.h:78, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASVertex.cpp:35: /usr/include/qt5/QtGui/qpainterpath.h:152:10: note: declared here 152 | void addRoundRect(const QRectF &rect, int roundness); | ^~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASVertex.cpp: In member function 'virtual QPainterPath OpenMS::TOPPASVertex::shape() const': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASVertex.cpp:236:23: warning: 'void QPainterPath::addRoundRect(const QRectF&, int, int)' is deprecated: Use addRoundedRect(..., Qt::RelativeSize) instead [-Wdeprecated-declarations] 236 | shape.addRoundRect(boundingRect(), 20, 20); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtGui/qpainterpath.h:147:10: note: declared here 147 | void addRoundRect(const QRectF &rect, int xRnd, int yRnd); | ^~~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASWidget.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASWidget.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASWidget.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASWidget.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASWidget.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASWidget.cpp: In member function 'virtual void OpenMS::TOPPASWidget::wheelEvent(QWheelEvent*)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASWidget.cpp:101:22: warning: 'int QWheelEvent::delta() const' is deprecated: Use angleDelta() [-Wdeprecated-declarations] 101 | zoom(event->delta() < 0); | ~~~~~~~~~~~~^~ In file included from /usr/include/qt5/QtGui/QDragEnterEvent:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASWidget.cpp:44: /usr/include/qt5/QtGui/qevent.h:219:16: note: declared here 219 | inline int delta() const { return qt4D; } | ^~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TreeView.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TreeView.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TreeView.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TreeView.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TreeView.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TreeView.cpp: In member function 'void OpenMS::TreeView::hideColumns(const QStringList&)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TreeView.cpp:87:35: warning: 'QSet QList::toSet() const [with T = QString]' is deprecated: Use QSet(list.begin(), list.end()) instead. [-Wdeprecated-declarations] 87 | auto hset = header_names.toSet(); | ~~~~~~~~~~~~~~~~~~^~ In file included from /usr/include/qt5/QtCore/qobject.h:49, from /usr/include/qt5/QtWidgets/qwidget.h:45, from /usr/include/qt5/QtWidgets/qframe.h:44, from /usr/include/qt5/QtWidgets/qabstractscrollarea.h:44, from /usr/include/qt5/QtWidgets/qabstractitemview.h:44, from /usr/include/qt5/QtWidgets/qtreeview.h:44, from /usr/include/qt5/QtWidgets/qtreewidget.h:44, from /usr/include/qt5/QtWidgets/QTreeWidget:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TreeView.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TreeView.cpp:35: /usr/include/qt5/QtCore/qlist.h:413:13: note: declared here 413 | QSet toSet() const; | ^~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TreeView.cpp:101:162: warning: 'QList QSet::toList() const [with T = QString]' is deprecated: Use values() instead. [-Wdeprecated-declarations] 101 | throw Exception::InvalidParameter(__FILE__, __LINE__, OPENMS_PRETTY_FUNCTION, "header_names contains a column name which is unknown: " + String(hset.toList().join(", "))); | ~~~~~~~~~~~^~ In file included from /usr/include/qt5/QtCore/qitemselectionmodel.h:45, from /usr/include/qt5/QtWidgets/qabstractitemview.h:46: /usr/include/qt5/QtCore/qset.h:265:14: note: declared here 265 | QList toList() const { return values(); } | ^~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPViewMenu.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPViewMenu.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPViewMenu.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPViewMenu.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPViewMenu.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TOPPViewMenu.h:43, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPViewMenu.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/FlagSet.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TOPPViewMenu.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPViewBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPViewMenu.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPViewBase.h:48: /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:135:27: note: by 'OpenMS::PlotCanvas& OpenMS::PlotCanvas::operator=(const OpenMS::PlotCanvas&)' 135 | class OPENMS_GUI_DLLAPI PlotCanvas : | ^~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPViewBase.h:124:27: note: by 'OpenMS::TOPPViewBase& OpenMS::TOPPViewBase::operator=(const OpenMS::TOPPViewBase&)' 124 | class OPENMS_GUI_DLLAPI TOPPViewBase : | ^~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVDIATreeTabController.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVDIATreeTabController.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVDIATreeTabController.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVDIATreeTabController.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TVDIATreeTabController.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TVDIATreeTabController.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TVDIATreeTabController.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/SpectrumSettings.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TVDIATreeTabController.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPViewBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TVDIATreeTabController.cpp:43: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPViewBase.h:48: /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:135:27: note: by 'OpenMS::PlotCanvas& OpenMS::PlotCanvas::operator=(const OpenMS::PlotCanvas&)' 135 | class OPENMS_GUI_DLLAPI PlotCanvas : | ^~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPViewBase.h:124:27: note: by 'OpenMS::TOPPViewBase& OpenMS::TOPPViewBase::operator=(const OpenMS::TOPPViewBase&)' 124 | class OPENMS_GUI_DLLAPI TOPPViewBase : | ^~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot1DWidget.h:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TVDIATreeTabController.cpp:45: /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot1DCanvas.h:70:27: note: by 'OpenMS::Plot1DCanvas& OpenMS::Plot1DCanvas::operator=(const OpenMS::Plot1DCanvas&)' 70 | class OPENMS_GUI_DLLAPI Plot1DCanvas : | ^~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVSpectraViewController.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVSpectraViewController.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVSpectraViewController.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVSpectraViewController.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TVSpectraViewController.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TVSpectraViewController.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TVSpectraViewController.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/SpectrumSettings.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TVSpectraViewController.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPViewBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TVSpectraViewController.cpp:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPViewBase.h:48: /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:135:27: note: by 'OpenMS::PlotCanvas& OpenMS::PlotCanvas::operator=(const OpenMS::PlotCanvas&)' 135 | class OPENMS_GUI_DLLAPI PlotCanvas : | ^~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPViewBase.h:124:27: note: by 'OpenMS::TOPPViewBase& OpenMS::TOPPViewBase::operator=(const OpenMS::TOPPViewBase&)' 124 | class OPENMS_GUI_DLLAPI TOPPViewBase : | ^~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot1DWidget.h:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TVSpectraViewController.cpp:42: /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot1DCanvas.h:70:27: note: by 'OpenMS::Plot1DCanvas& OpenMS::Plot1DCanvas::operator=(const OpenMS::Plot1DCanvas&)' 70 | class OPENMS_GUI_DLLAPI Plot1DCanvas : | ^~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVIdentificationViewController.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVIdentificationViewController.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVIdentificationViewController.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVIdentificationViewController.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TVIdentificationViewController.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TVIdentificationViewController.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TVIdentificationViewController.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/SpectrumSettings.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TVIdentificationViewController.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TVIdentificationViewController.cpp:41: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:87:35: note: by 'OpenMS::TheoreticalSpectrumGenerator& OpenMS::TheoreticalSpectrumGenerator::operator=(const OpenMS::TheoreticalSpectrumGenerator&)' 87 | TheoreticalSpectrumGenerator& operator=(const TheoreticalSpectrumGenerator& tsg); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPViewBase.h:48, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TVIdentificationViewController.cpp:51: /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:135:27: note: by 'OpenMS::PlotCanvas& OpenMS::PlotCanvas::operator=(const OpenMS::PlotCanvas&)' 135 | class OPENMS_GUI_DLLAPI PlotCanvas : | ^~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPViewBase.h:124:27: note: by 'OpenMS::TOPPViewBase& OpenMS::TOPPViewBase::operator=(const OpenMS::TOPPViewBase&)' 124 | class OPENMS_GUI_DLLAPI TOPPViewBase : | ^~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TVIdentificationViewController.cpp:52: /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/SpectraIDViewTab.h:59:27: note: by 'OpenMS::SpectraIDViewTab& OpenMS::SpectraIDViewTab::operator=(const OpenMS::SpectraIDViewTab&)' 59 | class OPENMS_GUI_DLLAPI SpectraIDViewTab : | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot1DWidget.h:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TVIdentificationViewController.cpp:53: /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot1DCanvas.h:70:27: note: by 'OpenMS::Plot1DCanvas& OpenMS::Plot1DCanvas::operator=(const OpenMS::Plot1DCanvas&)' 70 | class OPENMS_GUI_DLLAPI Plot1DCanvas : | ^~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TVIdentificationViewController.cpp: In member function 'void OpenMS::TVIdentificationViewController::addPeakAnnotationsFromID_(const OpenMS::PeptideHit&)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TVIdentificationViewController.cpp:1207:79: warning: 'QString::SkipEmptyParts' is deprecated [-Wdeprecated-declarations] 1207 | QStringList lines = label.toQString().split(QRegExp("[\r\n]"), QString::SkipEmptyParts); | ^~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtCore/qdatetime.h:44, from /usr/include/qt5/QtCore/QDate:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DateTime.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/DataProcessing.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/SpectrumSettings.h:44: /usr/include/qt5/QtCore/qstring.h:605:9: note: declared here 605 | SkipEmptyParts Q_DECL_ENUMERATOR_DEPRECATED | ^~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TVIdentificationViewController.cpp:1207:79: warning: 'QString::SkipEmptyParts' is deprecated [-Wdeprecated-declarations] 1207 | QStringList lines = label.toQString().split(QRegExp("[\r\n]"), QString::SkipEmptyParts); | ^~~~~~~~~~~~~~ /usr/include/qt5/QtCore/qstring.h:605:9: note: declared here 605 | SkipEmptyParts Q_DECL_ENUMERATOR_DEPRECATED | ^~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TVIdentificationViewController.cpp:1207:50: warning: 'QStringList QString::split(const QRegExp&, SplitBehavior) const' is deprecated: Use split(const QRegularExpression &, Qt::SplitBehavior) variant instead [-Wdeprecated-declarations] 1207 | QStringList lines = label.toQString().split(QRegExp("[\r\n]"), QString::SkipEmptyParts); | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/include/qt5/QtCore/qstring.h:622:17: note: declared here 622 | QStringList split(const QRegExp &sep, SplitBehavior behavior) const; | ^~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TVIdentificationViewController.cpp:44: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::FilterPeptideEvidences(EvidenceFilter&, std::vector&) [with EvidenceFilter = DigestionFilter]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:486:68: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:728:35: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::DigestionFilter]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 728 | std::not1(filter)); | ~~~~~~~~~^~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1138:24: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1147:26: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMetaValue]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:572:26: required from 'static void OpenMS::IDFilter::keepMatchingItemsUnroll(IDContainer&, const Predicate&) [with IDContainer = std::vector; Predicate = HasMetaValue]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1210:30: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMetaValue]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1358:31: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1368:35: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVToolDiscovery.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVToolDiscovery.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVToolDiscovery.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVToolDiscovery.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TVToolDiscovery.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/qrc_resources.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/qrc_resources.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/qrc_resources.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/qrc_resources.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/qrc_resources.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVControllerBase.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVControllerBase.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVControllerBase.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVControllerBase.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TVControllerBase.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPViewBase.h:48, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TVControllerBase.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPViewBase.h:42: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:135:27: note: by 'OpenMS::PlotCanvas& OpenMS::PlotCanvas::operator=(const OpenMS::PlotCanvas&)' 135 | class OPENMS_GUI_DLLAPI PlotCanvas : | ^~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPViewBase.h:124:27: note: by 'OpenMS::TOPPViewBase& OpenMS::TOPPViewBase::operator=(const OpenMS::TOPPViewBase&)' 124 | class OPENMS_GUI_DLLAPI TOPPViewBase : | ^~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Linking CXX shared library ../../lib/libOpenMS_GUI.so cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenMS_GUI.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,--dependency-file,CMakeFiles/OpenMS_GUI.dir/link.d -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libOpenMS_GUI.so -o ../../lib/libOpenMS_GUI.so CMakeFiles/OpenMS_GUI.dir/OpenMS_GUI_autogen/mocs_compilation.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DDistanceItem.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DItem.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DTextItem.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DVerticalLineItem.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotations1DContainer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/INIFileEditorWindow.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/SwathWizardBase.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/TOPPASBase.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/DataFilterDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/FeatureEditDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/HistogramDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/LayerStatisticsDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/ListFilterDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/PythonModuleRequirement.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/PythonSelector.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SaveImageDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Plot1DGoToDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Plot1DPrefDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Plot2DGoToDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Plot2DPrefDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Plot3DPrefDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SpectrumAlignmentDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SwathTabWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASIOMappingDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASInputFileDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASInputFilesDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASOutputFilesDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASToolConfigDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASVertexNameDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPViewOpenDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPViewPrefDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/ToolsDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/INTERFACES/IPeptideIds.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/CommonDefs.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/ExternalProcessMBox.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/FilterableList.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/GUIHelpers.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/AcquisitionInfoVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/AcquisitionVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/BaseVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/BaseVisualizerGUI.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ContactPersonVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DataProcessingVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DigestionVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DocumentIdentifierVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/GradientVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/HPLCVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/InstrumentSettingsVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/InstrumentVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/IonDetectorVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/IonSourceVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MassAnalyzerVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MetaInfoDescriptionVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MetaInfoVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ModificationVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PeptideHitVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PrecursorVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProteinHitVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SampleVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ScanWindowVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SoftwareVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SourceFileVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SpectrumSettingsVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/TaggingVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProductVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISITORS/LayerStatistics.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisPainter.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisTickCalculator.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ColorSelector.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DataSelectionTabs.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIATreeTab.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedTabBar.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedTabBarWidgetInterface.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedWorkspace.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/FilterList.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/GUIProgressLoggerImpl.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/HistogramWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/InputFile.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/InputFileList.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerListView.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataBase.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataChrom.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataConsensus.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataFeature.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataIdent.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataPeak.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ListEditor.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LogWindow.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MetaDataBrowser.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MultiGradient.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MultiGradientSelector.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/OutputDirectory.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Painter1DBase.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ParamEditor.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot1DCanvas.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot1DWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot2DCanvas.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot2DWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot3DCanvas.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot3DOpenGLCanvas.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot3DWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/PlotCanvas.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/PlotWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/RecentFilesMenu.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SequenceVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectraIDViewTab.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectraTreeTab.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SwathLibraryStats.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TableView.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASEdge.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASInputFileListVertex.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASMergerVertex.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASOutputFileListVertex.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASResource.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASResources.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASScene.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASSplitterVertex.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASToolVertex.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASTreeView.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASVertex.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPViewMenu.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TreeView.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVDIATreeTabController.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVIdentificationViewController.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVSpectraViewController.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVControllerBase.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVToolDiscovery.cpp.o CMakeFiles/OpenMS_GUI.dir/qrc_resources.cpp.o -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so /usr/lib64/libQt5Svg.so.5.15.10 /usr/lib64/libQt5WebEngineWidgets.so.5.15.12 ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/libQt5WebEngineCore.so.5.15.12 /usr/lib64/libQt5WebChannel.so.5.15.10 /usr/lib64/libQt5Positioning.so.5.15.10 /usr/lib64/libQt5Quick.so.5.15.10 /usr/lib64/libQt5QmlModels.so.5.15.10 /usr/lib64/libQt5Qml.so.5.15.10 /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5PrintSupport.so.5.15.10 /usr/lib64/libQt5Widgets.so.5.15.10 /usr/lib64/libQt5Gui.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Built target OpenMS_GUI make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/Resampler.dir/build.make src/topp/CMakeFiles/Resampler.dir/depend /usr/bin/make -f src/topp/CMakeFiles/ExecutePipeline.dir/build.make src/topp/CMakeFiles/ExecutePipeline.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/Resampler.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/Resampler.dir/build.make src/topp/CMakeFiles/Resampler.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/ExecutePipeline.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/ExecutePipeline.dir/build.make src/topp/CMakeFiles/ExecutePipeline.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Building CXX object src/topp/CMakeFiles/ExecutePipeline.dir/ExecutePipeline.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && 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-isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/ExecutePipeline.dir/ExecutePipeline.cpp.o -MF CMakeFiles/ExecutePipeline.dir/ExecutePipeline.cpp.o.d -o CMakeFiles/ExecutePipeline.dir/ExecutePipeline.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/ExecutePipeline.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Building CXX object src/topp/CMakeFiles/Resampler.dir/Resampler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/Resampler.dir/Resampler.cpp.o -MF CMakeFiles/Resampler.dir/Resampler.cpp.o.d -o CMakeFiles/Resampler.dir/Resampler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/Resampler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/Resampler.cpp:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/XMLFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzMLFile.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/Resampler.cpp:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:61:23: note: by 'OpenMS::LinearResampler& OpenMS::LinearResampler::operator=(const OpenMS::LinearResampler&)' 61 | class OPENMS_DLLAPI LinearResampler : | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/Resampler.cpp:41: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h:57:23: note: by 'OpenMS::LinearResamplerAlign::operator=' 57 | class OPENMS_DLLAPI LinearResamplerAlign : | ^~~~~~~~~~~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Linking CXX executable ../../bin/ExecutePipeline cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/ExecutePipeline.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/ExecutePipeline.dir/link.d CMakeFiles/ExecutePipeline.dir/ExecutePipeline.cpp.o -o ../../bin/ExecutePipeline -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS_GUI.so ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/libQt5Svg.so.5.15.10 /usr/lib64/libQt5WebEngineWidgets.so.5.15.12 /usr/lib64/libQt5WebEngineCore.so.5.15.12 /usr/lib64/libQt5WebChannel.so.5.15.10 /usr/lib64/libQt5Positioning.so.5.15.10 /usr/lib64/libQt5Quick.so.5.15.10 /usr/lib64/libQt5QmlModels.so.5.15.10 /usr/lib64/libQt5Qml.so.5.15.10 /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5PrintSupport.so.5.15.10 /usr/lib64/libQt5Widgets.so.5.15.10 /usr/lib64/libQt5Gui.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Built target ExecutePipeline make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Linking CXX executable ../../bin/Resampler cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/Resampler.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/Resampler.dir/link.d CMakeFiles/Resampler.dir/Resampler.cpp.o -o ../../bin/Resampler -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS_GUI.so ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/libQt5Svg.so.5.15.10 /usr/lib64/libQt5WebEngineWidgets.so.5.15.12 /usr/lib64/libQt5WebEngineCore.so.5.15.12 /usr/lib64/libQt5WebChannel.so.5.15.10 /usr/lib64/libQt5Positioning.so.5.15.10 /usr/lib64/libQt5Quick.so.5.15.10 /usr/lib64/libQt5QmlModels.so.5.15.10 /usr/lib64/libQt5Qml.so.5.15.10 /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5PrintSupport.so.5.15.10 /usr/lib64/libQt5Widgets.so.5.15.10 /usr/lib64/libQt5Gui.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Built target Resampler make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/TOPP.dir/build.make src/topp/CMakeFiles/TOPP.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build 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--check-build-system CMakeFiles/Makefile.cmake 0 make[1]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[1]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/OpenMS-2.8.0/build/CMakeFiles 80 make[1]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f CMakeFiles/Makefile2 src/utils/CMakeFiles/UTILS.dir/all /usr/bin/make -f src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build.make src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo 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Consolidate compiler generated dependencies of target OpenMS make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms/CMakeFiles/OpenMS.dir/build.make src/openms/CMakeFiles/OpenMS.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 0%] Linking CXX shared library ../../lib/libOpenMS.so cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenMS.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,--dependency-file,CMakeFiles/OpenMS.dir/link.d -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libOpenMS.so -o ../../lib/libOpenMS.so CMakeFiles/OpenMS.dir/OpenMS_autogen/mocs_compilation.cpp.o CMakeFiles/OpenMS.dir/source/INTERFACES_IMPL/MockImplementation.cpp.o CMakeFiles/OpenMS.dir/source/CONCEPT/ClassTest.cpp.o CMakeFiles/OpenMS.dir/source/CONCEPT/Exception.cpp.o 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CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.cpp.o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessTransforming.cpp.o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessQuadMZTransforming.cpp.o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.cpp.o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SimpleOpenMSSpectraAccessFactory.cpp.o CMakeFiles/OpenMS.dir/source/APPLICATIONS/ConsoleUtils.cpp.o CMakeFiles/OpenMS.dir/source/APPLICATIONS/INIUpdater.cpp.o CMakeFiles/OpenMS.dir/source/APPLICATIONS/ParameterInformation.cpp.o CMakeFiles/OpenMS.dir/source/APPLICATIONS/SearchEngineBase.cpp.o CMakeFiles/OpenMS.dir/source/APPLICATIONS/ToolHandler.cpp.o CMakeFiles/OpenMS.dir/source/APPLICATIONS/TOPPBase.cpp.o -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 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src/utils/CMakeFiles/AccurateMassSearch.dir/AccurateMassSearch.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe 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cmake_link_script CMakeFiles/AccurateMassSearch.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/AccurateMassSearch.dir/link.d CMakeFiles/AccurateMassSearch.dir/AccurateMassSearch.cpp.o -o ../../bin/AccurateMassSearch -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Built target AccurateMassSearch make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/ClusterMassTraces.dir/build.make src/utils/CMakeFiles/ClusterMassTraces.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/ClusterMassTraces.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/ClusterMassTraces.dir/build.make src/utils/CMakeFiles/ClusterMassTraces.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Linking CXX executable ../../bin/AssayGeneratorMetabo cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/AssayGeneratorMetabo.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/AssayGeneratorMetabo.dir/link.d CMakeFiles/AssayGeneratorMetabo.dir/AssayGeneratorMetabo.cpp.o -o ../../bin/AssayGeneratorMetabo -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Built target AssayGeneratorMetabo make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/build.make src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/build.make src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Building CXX object src/utils/CMakeFiles/ClusterMassTraces.dir/ClusterMassTraces.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/ClusterMassTraces.dir/ClusterMassTraces.cpp.o -MF CMakeFiles/ClusterMassTraces.dir/ClusterMassTraces.cpp.o.d -o CMakeFiles/ClusterMassTraces.dir/ClusterMassTraces.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/ClusterMassTraces.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Linking CXX executable ../../bin/ClusterMassTraces cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/ClusterMassTraces.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/ClusterMassTraces.dir/link.d CMakeFiles/ClusterMassTraces.dir/ClusterMassTraces.cpp.o -o ../../bin/ClusterMassTraces -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Built target ClusterMassTraces make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/CVInspector.dir/build.make src/utils/CMakeFiles/CVInspector.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/CVInspector.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/CVInspector.dir/build.make src/utils/CMakeFiles/CVInspector.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Building CXX object src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/ClusterMassTracesByPrecursor.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/ClusterMassTracesByPrecursor.cpp.o -MF CMakeFiles/ClusterMassTracesByPrecursor.dir/ClusterMassTracesByPrecursor.cpp.o.d -o CMakeFiles/ClusterMassTracesByPrecursor.dir/ClusterMassTracesByPrecursor.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/ClusterMassTracesByPrecursor.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Building CXX object src/utils/CMakeFiles/CVInspector.dir/CVInspector.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/CVInspector.dir/CVInspector.cpp.o -MF CMakeFiles/CVInspector.dir/CVInspector.cpp.o.d -o CMakeFiles/CVInspector.dir/CVInspector.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/CVInspector.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Linking CXX executable ../../bin/ClusterMassTracesByPrecursor cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/ClusterMassTracesByPrecursor.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/ClusterMassTracesByPrecursor.dir/link.d CMakeFiles/ClusterMassTracesByPrecursor.dir/ClusterMassTracesByPrecursor.cpp.o -o ../../bin/ClusterMassTracesByPrecursor -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Built target ClusterMassTracesByPrecursor make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/DatabaseFilter.dir/build.make src/utils/CMakeFiles/DatabaseFilter.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/DatabaseFilter.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/DatabaseFilter.dir/build.make src/utils/CMakeFiles/DatabaseFilter.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Linking CXX executable ../../bin/CVInspector cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/CVInspector.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/CVInspector.dir/link.d CMakeFiles/CVInspector.dir/CVInspector.cpp.o -o ../../bin/CVInspector -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Built target CVInspector make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/DecoyDatabase.dir/build.make src/utils/CMakeFiles/DecoyDatabase.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/DecoyDatabase.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/DecoyDatabase.dir/build.make src/utils/CMakeFiles/DecoyDatabase.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Building CXX object src/utils/CMakeFiles/DatabaseFilter.dir/DatabaseFilter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/DatabaseFilter.dir/DatabaseFilter.cpp.o -MF CMakeFiles/DatabaseFilter.dir/DatabaseFilter.cpp.o.d -o CMakeFiles/DatabaseFilter.dir/DatabaseFilter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/DatabaseFilter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Linking CXX executable ../../bin/DatabaseFilter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/DatabaseFilter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/DatabaseFilter.dir/link.d CMakeFiles/DatabaseFilter.dir/DatabaseFilter.cpp.o -o ../../bin/DatabaseFilter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Built target DatabaseFilter make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/DeMeanderize.dir/build.make src/utils/CMakeFiles/DeMeanderize.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/DeMeanderize.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/DeMeanderize.dir/build.make src/utils/CMakeFiles/DeMeanderize.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Building CXX object src/utils/CMakeFiles/DeMeanderize.dir/DeMeanderize.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/DeMeanderize.dir/DeMeanderize.cpp.o -MF CMakeFiles/DeMeanderize.dir/DeMeanderize.cpp.o.d -o CMakeFiles/DeMeanderize.dir/DeMeanderize.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/DeMeanderize.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Linking CXX executable ../../bin/DeMeanderize cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/DeMeanderize.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/DeMeanderize.dir/link.d CMakeFiles/DeMeanderize.dir/DeMeanderize.cpp.o -o ../../bin/DeMeanderize -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Built target DeMeanderize make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/Digestor.dir/build.make src/utils/CMakeFiles/Digestor.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/Digestor.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/Digestor.dir/build.make src/utils/CMakeFiles/Digestor.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Building CXX object src/utils/CMakeFiles/DecoyDatabase.dir/DecoyDatabase.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/DecoyDatabase.dir/DecoyDatabase.cpp.o -MF CMakeFiles/DecoyDatabase.dir/DecoyDatabase.cpp.o.d -o CMakeFiles/DecoyDatabase.dir/DecoyDatabase.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/DecoyDatabase.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Building CXX object src/utils/CMakeFiles/Digestor.dir/Digestor.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/Digestor.dir/Digestor.cpp.o -MF CMakeFiles/Digestor.dir/Digestor.cpp.o.d -o CMakeFiles/Digestor.dir/Digestor.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/Digestor.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Linking CXX executable ../../bin/Digestor cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/Digestor.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/Digestor.dir/link.d CMakeFiles/Digestor.dir/Digestor.cpp.o -o ../../bin/Digestor -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Built target Digestor make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/DigestorMotif.dir/build.make src/utils/CMakeFiles/DigestorMotif.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/DigestorMotif.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/DigestorMotif.dir/build.make src/utils/CMakeFiles/DigestorMotif.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Linking CXX executable ../../bin/DecoyDatabase cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/DecoyDatabase.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/DecoyDatabase.dir/link.d CMakeFiles/DecoyDatabase.dir/DecoyDatabase.cpp.o -o ../../bin/DecoyDatabase -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libboost_regex.so /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Building CXX object src/utils/CMakeFiles/DigestorMotif.dir/DigestorMotif.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/DigestorMotif.dir/DigestorMotif.cpp.o -MF CMakeFiles/DigestorMotif.dir/DigestorMotif.cpp.o.d -o CMakeFiles/DigestorMotif.dir/DigestorMotif.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/DigestorMotif.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Built target DecoyDatabase make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/Epifany.dir/build.make src/utils/CMakeFiles/Epifany.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/Epifany.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/Epifany.dir/build.make src/utils/CMakeFiles/Epifany.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Linking CXX executable ../../bin/DigestorMotif cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/DigestorMotif.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/DigestorMotif.dir/link.d CMakeFiles/DigestorMotif.dir/DigestorMotif.cpp.o -o ../../bin/DigestorMotif -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Built target DigestorMotif make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/ERPairFinder.dir/build.make src/utils/CMakeFiles/ERPairFinder.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/ERPairFinder.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/ERPairFinder.dir/build.make src/utils/CMakeFiles/ERPairFinder.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Building CXX object src/utils/CMakeFiles/Epifany.dir/Epifany.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/Epifany.dir/Epifany.cpp.o -MF CMakeFiles/Epifany.dir/Epifany.cpp.o.d -o CMakeFiles/Epifany.dir/Epifany.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/Epifany.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Building CXX object src/utils/CMakeFiles/ERPairFinder.dir/ERPairFinder.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/ERPairFinder.dir/ERPairFinder.cpp.o -MF CMakeFiles/ERPairFinder.dir/ERPairFinder.cpp.o.d -o CMakeFiles/ERPairFinder.dir/ERPairFinder.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/ERPairFinder.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Linking CXX executable ../../bin/ERPairFinder cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/ERPairFinder.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/ERPairFinder.dir/link.d CMakeFiles/ERPairFinder.dir/ERPairFinder.cpp.o -o ../../bin/ERPairFinder -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Built target ERPairFinder make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/build.make src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/build.make src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Linking CXX executable ../../bin/Epifany cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/Epifany.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/Epifany.dir/link.d CMakeFiles/Epifany.dir/Epifany.cpp.o -o ../../bin/Epifany -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Built target Epifany make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/FFEval.dir/build.make src/utils/CMakeFiles/FFEval.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/FFEval.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/FFEval.dir/build.make src/utils/CMakeFiles/FFEval.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Building CXX object src/utils/CMakeFiles/FFEval.dir/FFEval.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/FFEval.dir/FFEval.cpp.o -MF CMakeFiles/FFEval.dir/FFEval.cpp.o.d -o CMakeFiles/FFEval.dir/FFEval.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/FFEval.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Building CXX object src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/FeatureFinderMetaboIdent.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/FeatureFinderMetaboIdent.cpp.o -MF CMakeFiles/FeatureFinderMetaboIdent.dir/FeatureFinderMetaboIdent.cpp.o.d -o CMakeFiles/FeatureFinderMetaboIdent.dir/FeatureFinderMetaboIdent.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/FeatureFinderMetaboIdent.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Linking CXX executable ../../bin/FFEval cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/FFEval.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/FFEval.dir/link.d CMakeFiles/FFEval.dir/FFEval.cpp.o -o ../../bin/FFEval -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Built target FFEval make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/FuzzyDiff.dir/build.make src/utils/CMakeFiles/FuzzyDiff.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/FuzzyDiff.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/FuzzyDiff.dir/build.make src/utils/CMakeFiles/FuzzyDiff.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Linking CXX executable ../../bin/FeatureFinderMetaboIdent cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureFinderMetaboIdent.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/FeatureFinderMetaboIdent.dir/link.d CMakeFiles/FeatureFinderMetaboIdent.dir/FeatureFinderMetaboIdent.cpp.o -o ../../bin/FeatureFinderMetaboIdent -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Built target FeatureFinderMetaboIdent make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/IDDecoyProbability.dir/build.make src/utils/CMakeFiles/IDDecoyProbability.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/IDDecoyProbability.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/IDDecoyProbability.dir/build.make src/utils/CMakeFiles/IDDecoyProbability.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Building CXX object src/utils/CMakeFiles/FuzzyDiff.dir/FuzzyDiff.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/FuzzyDiff.dir/FuzzyDiff.cpp.o -MF CMakeFiles/FuzzyDiff.dir/FuzzyDiff.cpp.o.d -o CMakeFiles/FuzzyDiff.dir/FuzzyDiff.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/FuzzyDiff.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Linking CXX executable ../../bin/FuzzyDiff cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/FuzzyDiff.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/FuzzyDiff.dir/link.d CMakeFiles/FuzzyDiff.dir/FuzzyDiff.cpp.o -o ../../bin/FuzzyDiff -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Built target FuzzyDiff make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/IDExtractor.dir/build.make src/utils/CMakeFiles/IDExtractor.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/IDExtractor.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/IDExtractor.dir/build.make src/utils/CMakeFiles/IDExtractor.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Building CXX object src/utils/CMakeFiles/IDDecoyProbability.dir/IDDecoyProbability.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/IDDecoyProbability.dir/IDDecoyProbability.cpp.o -MF CMakeFiles/IDDecoyProbability.dir/IDDecoyProbability.cpp.o.d -o CMakeFiles/IDDecoyProbability.dir/IDDecoyProbability.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/IDDecoyProbability.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Linking CXX executable ../../bin/IDDecoyProbability cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDDecoyProbability.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/IDDecoyProbability.dir/link.d CMakeFiles/IDDecoyProbability.dir/IDDecoyProbability.cpp.o -o ../../bin/IDDecoyProbability -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Built target IDDecoyProbability make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/IDMassAccuracy.dir/build.make src/utils/CMakeFiles/IDMassAccuracy.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/IDMassAccuracy.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/IDMassAccuracy.dir/build.make src/utils/CMakeFiles/IDMassAccuracy.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Building CXX object src/utils/CMakeFiles/IDExtractor.dir/IDExtractor.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/IDExtractor.dir/IDExtractor.cpp.o -MF CMakeFiles/IDExtractor.dir/IDExtractor.cpp.o.d -o CMakeFiles/IDExtractor.dir/IDExtractor.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/IDExtractor.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Linking CXX executable ../../bin/IDExtractor cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDExtractor.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/IDExtractor.dir/link.d CMakeFiles/IDExtractor.dir/IDExtractor.cpp.o -o ../../bin/IDExtractor -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Built target IDExtractor make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/IDScoreSwitcher.dir/build.make src/utils/CMakeFiles/IDScoreSwitcher.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/IDScoreSwitcher.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/IDScoreSwitcher.dir/build.make src/utils/CMakeFiles/IDScoreSwitcher.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Building CXX object src/utils/CMakeFiles/IDMassAccuracy.dir/IDMassAccuracy.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/IDMassAccuracy.dir/IDMassAccuracy.cpp.o -MF CMakeFiles/IDMassAccuracy.dir/IDMassAccuracy.cpp.o.d -o CMakeFiles/IDMassAccuracy.dir/IDMassAccuracy.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/IDMassAccuracy.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Linking CXX executable ../../bin/IDMassAccuracy cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDMassAccuracy.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/IDMassAccuracy.dir/link.d CMakeFiles/IDMassAccuracy.dir/IDMassAccuracy.cpp.o -o ../../bin/IDMassAccuracy -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Built target IDMassAccuracy make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/IDSplitter.dir/build.make src/utils/CMakeFiles/IDSplitter.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/IDSplitter.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/IDSplitter.dir/build.make src/utils/CMakeFiles/IDSplitter.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Building CXX object src/utils/CMakeFiles/IDScoreSwitcher.dir/IDScoreSwitcher.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/IDScoreSwitcher.dir/IDScoreSwitcher.cpp.o -MF CMakeFiles/IDScoreSwitcher.dir/IDScoreSwitcher.cpp.o.d -o CMakeFiles/IDScoreSwitcher.dir/IDScoreSwitcher.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/IDScoreSwitcher.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Linking CXX executable ../../bin/IDScoreSwitcher cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDScoreSwitcher.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/IDScoreSwitcher.dir/link.d CMakeFiles/IDScoreSwitcher.dir/IDScoreSwitcher.cpp.o -o ../../bin/IDScoreSwitcher -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Built target IDScoreSwitcher make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/LabeledEval.dir/build.make src/utils/CMakeFiles/LabeledEval.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/LabeledEval.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/LabeledEval.dir/build.make src/utils/CMakeFiles/LabeledEval.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Building CXX object src/utils/CMakeFiles/IDSplitter.dir/IDSplitter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/IDSplitter.dir/IDSplitter.cpp.o -MF CMakeFiles/IDSplitter.dir/IDSplitter.cpp.o.d -o CMakeFiles/IDSplitter.dir/IDSplitter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/IDSplitter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Linking CXX executable ../../bin/IDSplitter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDSplitter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/IDSplitter.dir/link.d CMakeFiles/IDSplitter.dir/IDSplitter.cpp.o -o ../../bin/IDSplitter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Built target IDSplitter make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/MassCalculator.dir/build.make src/utils/CMakeFiles/MassCalculator.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/MassCalculator.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/MassCalculator.dir/build.make src/utils/CMakeFiles/MassCalculator.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Building CXX object src/utils/CMakeFiles/LabeledEval.dir/LabeledEval.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/LabeledEval.dir/LabeledEval.cpp.o -MF CMakeFiles/LabeledEval.dir/LabeledEval.cpp.o.d -o CMakeFiles/LabeledEval.dir/LabeledEval.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/LabeledEval.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Building CXX object src/utils/CMakeFiles/MassCalculator.dir/MassCalculator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/MassCalculator.dir/MassCalculator.cpp.o -MF CMakeFiles/MassCalculator.dir/MassCalculator.cpp.o.d -o CMakeFiles/MassCalculator.dir/MassCalculator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/MassCalculator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Linking CXX executable ../../bin/LabeledEval cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/LabeledEval.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/LabeledEval.dir/link.d CMakeFiles/LabeledEval.dir/LabeledEval.cpp.o -o ../../bin/LabeledEval -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Built target LabeledEval make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/build.make src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/build.make src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Linking CXX executable ../../bin/MassCalculator cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/MassCalculator.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/MassCalculator.dir/link.d CMakeFiles/MassCalculator.dir/MassCalculator.cpp.o -o ../../bin/MassCalculator -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Built target MassCalculator make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/build.make src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/build.make src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Building CXX object src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/MetaboliteAdductDecharger.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/MetaboliteAdductDecharger.cpp.o -MF CMakeFiles/MetaboliteAdductDecharger.dir/MetaboliteAdductDecharger.cpp.o.d -o CMakeFiles/MetaboliteAdductDecharger.dir/MetaboliteAdductDecharger.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/MetaboliteAdductDecharger.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Linking CXX executable ../../bin/MetaboliteAdductDecharger cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/MetaboliteAdductDecharger.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/MetaboliteAdductDecharger.dir/link.d CMakeFiles/MetaboliteAdductDecharger.dir/MetaboliteAdductDecharger.cpp.o -o ../../bin/MetaboliteAdductDecharger -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Built target MetaboliteAdductDecharger make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/MetaProSIP.dir/build.make src/utils/CMakeFiles/MetaProSIP.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/MetaProSIP.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/MetaProSIP.dir/build.make src/utils/CMakeFiles/MetaProSIP.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Building CXX object src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/MetaboliteSpectralMatcher.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/MetaboliteSpectralMatcher.cpp.o -MF CMakeFiles/MetaboliteSpectralMatcher.dir/MetaboliteSpectralMatcher.cpp.o.d -o CMakeFiles/MetaboliteSpectralMatcher.dir/MetaboliteSpectralMatcher.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/MetaboliteSpectralMatcher.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Linking CXX executable ../../bin/MetaboliteSpectralMatcher cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/MetaboliteSpectralMatcher.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/MetaboliteSpectralMatcher.dir/link.d CMakeFiles/MetaboliteSpectralMatcher.dir/MetaboliteSpectralMatcher.cpp.o -o ../../bin/MetaboliteSpectralMatcher -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Built target MetaboliteSpectralMatcher make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/MRMPairFinder.dir/build.make src/utils/CMakeFiles/MRMPairFinder.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/MRMPairFinder.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/MRMPairFinder.dir/build.make src/utils/CMakeFiles/MRMPairFinder.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Building CXX object src/utils/CMakeFiles/MRMPairFinder.dir/MRMPairFinder.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/MRMPairFinder.dir/MRMPairFinder.cpp.o -MF CMakeFiles/MRMPairFinder.dir/MRMPairFinder.cpp.o.d -o CMakeFiles/MRMPairFinder.dir/MRMPairFinder.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/MRMPairFinder.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Linking CXX executable ../../bin/MRMPairFinder cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/MRMPairFinder.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/MRMPairFinder.dir/link.d CMakeFiles/MRMPairFinder.dir/MRMPairFinder.cpp.o -o ../../bin/MRMPairFinder -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Built target MRMPairFinder make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/MSFraggerAdapter.dir/build.make src/utils/CMakeFiles/MSFraggerAdapter.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/MSFraggerAdapter.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/MSFraggerAdapter.dir/build.make src/utils/CMakeFiles/MSFraggerAdapter.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Building CXX object src/utils/CMakeFiles/MetaProSIP.dir/MetaProSIP.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/MetaProSIP.dir/MetaProSIP.cpp.o -MF CMakeFiles/MetaProSIP.dir/MetaProSIP.cpp.o.d -o CMakeFiles/MetaProSIP.dir/MetaProSIP.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/MetaProSIP.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /usr/include/c++/13/iostream:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/PrecisionWrapper.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Feature.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/utils/MetaProSIP.cpp:35: In member function 'std::basic_ostream >::operator<<(double)', inlined from 'MetaProSIP::normalizeToMax(std::map, std::allocator > > const&)' at /builddir/build/BUILD/OpenMS-2.8.0/src/utils/MetaProSIP.cpp:2477:52, inlined from 'MetaProSIP::main_(int, char const**)' at /builddir/build/BUILD/OpenMS-2.8.0/src/utils/MetaProSIP.cpp:3526:105: /usr/include/c++/13/ostream:223:25: warning: 'best_rate' may be used uninitialized [-Wmaybe-uninitialized] 223 | { return _M_insert(__f); } | ~~~~~~~~~^~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/utils/MetaProSIP.cpp: In member function 'MetaProSIP::main_(int, char const**)': /builddir/build/BUILD/OpenMS-2.8.0/src/utils/MetaProSIP.cpp:2472:12: note: 'best_rate' was declared here 2472 | double best_rate, best_score; | ^~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Building CXX object src/utils/CMakeFiles/MSFraggerAdapter.dir/MSFraggerAdapter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/MSFraggerAdapter.dir/MSFraggerAdapter.cpp.o -MF CMakeFiles/MSFraggerAdapter.dir/MSFraggerAdapter.cpp.o.d -o CMakeFiles/MSFraggerAdapter.dir/MSFraggerAdapter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/MSFraggerAdapter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Linking CXX executable ../../bin/MSFraggerAdapter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/MSFraggerAdapter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/MSFraggerAdapter.dir/link.d CMakeFiles/MSFraggerAdapter.dir/MSFraggerAdapter.cpp.o -o ../../bin/MSFraggerAdapter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Built target MSFraggerAdapter make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/MSSimulator.dir/build.make src/utils/CMakeFiles/MSSimulator.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/MSSimulator.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/MSSimulator.dir/build.make src/utils/CMakeFiles/MSSimulator.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Linking CXX executable ../../bin/MetaProSIP cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/MetaProSIP.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/MetaProSIP.dir/link.d CMakeFiles/MetaProSIP.dir/MetaProSIP.cpp.o -o ../../bin/MetaProSIP -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Built target MetaProSIP make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/MSstatsConverter.dir/build.make src/utils/CMakeFiles/MSstatsConverter.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/MSstatsConverter.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/MSstatsConverter.dir/build.make src/utils/CMakeFiles/MSstatsConverter.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Building CXX object src/utils/CMakeFiles/MSSimulator.dir/MSSimulator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/MSSimulator.dir/MSSimulator.cpp.o -MF CMakeFiles/MSSimulator.dir/MSSimulator.cpp.o.d -o CMakeFiles/MSSimulator.dir/MSSimulator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/MSSimulator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Linking CXX executable ../../bin/MSSimulator cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/MSSimulator.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/MSSimulator.dir/link.d CMakeFiles/MSSimulator.dir/MSSimulator.cpp.o -o ../../bin/MSSimulator -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Built target MSSimulator make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/MultiplexResolver.dir/build.make src/utils/CMakeFiles/MultiplexResolver.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/MultiplexResolver.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/MultiplexResolver.dir/build.make src/utils/CMakeFiles/MultiplexResolver.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Building CXX object src/utils/CMakeFiles/MSstatsConverter.dir/MSstatsConverter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/MSstatsConverter.dir/MSstatsConverter.cpp.o -MF CMakeFiles/MSstatsConverter.dir/MSstatsConverter.cpp.o.d -o CMakeFiles/MSstatsConverter.dir/MSstatsConverter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/MSstatsConverter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Linking CXX executable ../../bin/MSstatsConverter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/MSstatsConverter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/MSstatsConverter.dir/link.d CMakeFiles/MSstatsConverter.dir/MSstatsConverter.cpp.o -o ../../bin/MSstatsConverter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Built target MSstatsConverter make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/MzMLSplitter.dir/build.make src/utils/CMakeFiles/MzMLSplitter.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/MzMLSplitter.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/MzMLSplitter.dir/build.make src/utils/CMakeFiles/MzMLSplitter.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Building CXX object src/utils/CMakeFiles/MzMLSplitter.dir/MzMLSplitter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/MzMLSplitter.dir/MzMLSplitter.cpp.o -MF CMakeFiles/MzMLSplitter.dir/MzMLSplitter.cpp.o.d -o CMakeFiles/MzMLSplitter.dir/MzMLSplitter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/MzMLSplitter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Linking CXX executable ../../bin/MzMLSplitter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/MzMLSplitter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/MzMLSplitter.dir/link.d CMakeFiles/MzMLSplitter.dir/MzMLSplitter.cpp.o -o ../../bin/MzMLSplitter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Built target MzMLSplitter make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/NovorAdapter.dir/build.make src/utils/CMakeFiles/NovorAdapter.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/NovorAdapter.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/NovorAdapter.dir/build.make src/utils/CMakeFiles/NovorAdapter.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Building CXX object src/utils/CMakeFiles/MultiplexResolver.dir/MultiplexResolver.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/MultiplexResolver.dir/MultiplexResolver.cpp.o -MF CMakeFiles/MultiplexResolver.dir/MultiplexResolver.cpp.o.d -o CMakeFiles/MultiplexResolver.dir/MultiplexResolver.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/MultiplexResolver.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Linking CXX executable ../../bin/MultiplexResolver cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/MultiplexResolver.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/MultiplexResolver.dir/link.d CMakeFiles/MultiplexResolver.dir/MultiplexResolver.cpp.o -o ../../bin/MultiplexResolver -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Built target MultiplexResolver make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/build.make src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/build.make src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Building CXX object src/utils/CMakeFiles/NovorAdapter.dir/NovorAdapter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/NovorAdapter.dir/NovorAdapter.cpp.o -MF CMakeFiles/NovorAdapter.dir/NovorAdapter.cpp.o.d -o CMakeFiles/NovorAdapter.dir/NovorAdapter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/NovorAdapter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Linking CXX executable ../../bin/NovorAdapter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/NovorAdapter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/NovorAdapter.dir/link.d CMakeFiles/NovorAdapter.dir/NovorAdapter.cpp.o -o ../../bin/NovorAdapter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Built target NovorAdapter make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/OpenMSDatabasesInfo.dir/build.make src/utils/CMakeFiles/OpenMSDatabasesInfo.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/OpenMSDatabasesInfo.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/OpenMSDatabasesInfo.dir/build.make src/utils/CMakeFiles/OpenMSDatabasesInfo.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Building CXX object src/utils/CMakeFiles/OpenMSDatabasesInfo.dir/OpenMSDatabasesInfo.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/OpenMSDatabasesInfo.dir/OpenMSDatabasesInfo.cpp.o -MF CMakeFiles/OpenMSDatabasesInfo.dir/OpenMSDatabasesInfo.cpp.o.d -o CMakeFiles/OpenMSDatabasesInfo.dir/OpenMSDatabasesInfo.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/OpenMSDatabasesInfo.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Linking CXX executable ../../bin/OpenMSDatabasesInfo cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenMSDatabasesInfo.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/OpenMSDatabasesInfo.dir/link.d CMakeFiles/OpenMSDatabasesInfo.dir/OpenMSDatabasesInfo.cpp.o -o ../../bin/OpenMSDatabasesInfo -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Built target OpenMSDatabasesInfo make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/OpenMSInfo.dir/build.make src/utils/CMakeFiles/OpenMSInfo.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/OpenMSInfo.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/OpenMSInfo.dir/build.make src/utils/CMakeFiles/OpenMSInfo.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Building CXX object src/utils/CMakeFiles/OpenMSInfo.dir/OpenMSInfo.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/OpenMSInfo.dir/OpenMSInfo.cpp.o -MF CMakeFiles/OpenMSInfo.dir/OpenMSInfo.cpp.o.d -o CMakeFiles/OpenMSInfo.dir/OpenMSInfo.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/OpenMSInfo.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Linking CXX executable ../../bin/OpenMSInfo cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenMSInfo.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/OpenMSInfo.dir/link.d CMakeFiles/OpenMSInfo.dir/OpenMSInfo.cpp.o -o ../../bin/OpenMSInfo -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Built target OpenMSInfo make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/PeakPickerIterative.dir/build.make src/utils/CMakeFiles/PeakPickerIterative.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/PeakPickerIterative.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/PeakPickerIterative.dir/build.make src/utils/CMakeFiles/PeakPickerIterative.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Building CXX object src/utils/CMakeFiles/PeakPickerIterative.dir/PeakPickerIterative.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/PeakPickerIterative.dir/PeakPickerIterative.cpp.o -MF CMakeFiles/PeakPickerIterative.dir/PeakPickerIterative.cpp.o.d -o CMakeFiles/PeakPickerIterative.dir/PeakPickerIterative.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/PeakPickerIterative.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Linking CXX executable ../../bin/PeakPickerIterative cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/PeakPickerIterative.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/PeakPickerIterative.dir/link.d CMakeFiles/PeakPickerIterative.dir/PeakPickerIterative.cpp.o -o ../../bin/PeakPickerIterative -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Built target PeakPickerIterative make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/PSMFeatureExtractor.dir/build.make src/utils/CMakeFiles/PSMFeatureExtractor.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/PSMFeatureExtractor.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/PSMFeatureExtractor.dir/build.make src/utils/CMakeFiles/PSMFeatureExtractor.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Building CXX object src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/NucleicAcidSearchEngine.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/NucleicAcidSearchEngine.cpp.o -MF CMakeFiles/NucleicAcidSearchEngine.dir/NucleicAcidSearchEngine.cpp.o.d -o CMakeFiles/NucleicAcidSearchEngine.dir/NucleicAcidSearchEngine.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/NucleicAcidSearchEngine.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In member function 'NucleicAcidSearchEngine::AnnotatedHit::AnnotatedHit(NucleicAcidSearchEngine::AnnotatedHit&&)', inlined from 'std::pair::pair(double&, NucleicAcidSearchEngine::AnnotatedHit&&)' at /usr/include/c++/13/bits/stl_pair.h:688:35, inlined from 'std::make_pair(double&, NucleicAcidSearchEngine::AnnotatedHit&&)std::pair::type>::__type, std::__strip_reference_wrapper::type>::__type>' at /usr/include/c++/13/bits/stl_pair.h:927:72, inlined from 'NucleicAcidSearchEngine::main_(int, char const**) [clone ._omp_fn.0]' at /builddir/build/BUILD/OpenMS-2.8.0/src/utils/NucleicAcidSearchEngine.cpp:1344:51: /builddir/build/BUILD/OpenMS-2.8.0/src/utils/NucleicAcidSearchEngine.cpp:280:10: warning: 'D.988913.oligo_ref' may be used uninitialized [-Wmaybe-uninitialized] 280 | struct AnnotatedHit | ^~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/utils/NucleicAcidSearchEngine.cpp: In function 'NucleicAcidSearchEngine::main_(int, char const**) [clone ._omp_fn.0]': /builddir/build/BUILD/OpenMS-2.8.0/src/utils/NucleicAcidSearchEngine.cpp:1344:72: note: '' declared here 1344 | pos = scan_hits.insert(make_pair(score, AnnotatedHit())); | ^ In member function 'NucleicAcidSearchEngine::AnnotatedHit::AnnotatedHit(NucleicAcidSearchEngine::AnnotatedHit&&)', inlined from 'std::pair::pair(double&, NucleicAcidSearchEngine::AnnotatedHit&&)' at /usr/include/c++/13/bits/stl_pair.h:688:35, inlined from 'std::make_pair(double&, NucleicAcidSearchEngine::AnnotatedHit&&)std::pair::type>::__type, std::__strip_reference_wrapper::type>::__type>' at /usr/include/c++/13/bits/stl_pair.h:927:72, inlined from 'NucleicAcidSearchEngine::main_(int, char const**) [clone ._omp_fn.0]' at /builddir/build/BUILD/OpenMS-2.8.0/src/utils/NucleicAcidSearchEngine.cpp:1337:49: /builddir/build/BUILD/OpenMS-2.8.0/src/utils/NucleicAcidSearchEngine.cpp:280:10: warning: 'D.988920.oligo_ref' may be used uninitialized [-Wmaybe-uninitialized] 280 | struct AnnotatedHit | ^~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/utils/NucleicAcidSearchEngine.cpp: In function 'NucleicAcidSearchEngine::main_(int, char const**) [clone ._omp_fn.0]': /builddir/build/BUILD/OpenMS-2.8.0/src/utils/NucleicAcidSearchEngine.cpp:1337:70: note: '' declared here 1337 | pos = scan_hits.insert(make_pair(score, AnnotatedHit())); | ^ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Building CXX object src/utils/CMakeFiles/PSMFeatureExtractor.dir/PSMFeatureExtractor.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/PSMFeatureExtractor.dir/PSMFeatureExtractor.cpp.o -MF CMakeFiles/PSMFeatureExtractor.dir/PSMFeatureExtractor.cpp.o.d -o CMakeFiles/PSMFeatureExtractor.dir/PSMFeatureExtractor.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/PSMFeatureExtractor.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Linking CXX executable ../../bin/PSMFeatureExtractor cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/PSMFeatureExtractor.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/PSMFeatureExtractor.dir/link.d CMakeFiles/PSMFeatureExtractor.dir/PSMFeatureExtractor.cpp.o -o ../../bin/PSMFeatureExtractor -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Built target PSMFeatureExtractor make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/QCCalculator.dir/build.make src/utils/CMakeFiles/QCCalculator.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/QCCalculator.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/QCCalculator.dir/build.make src/utils/CMakeFiles/QCCalculator.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Building CXX object src/utils/CMakeFiles/QCCalculator.dir/QCCalculator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/QCCalculator.dir/QCCalculator.cpp.o -MF CMakeFiles/QCCalculator.dir/QCCalculator.cpp.o.d -o CMakeFiles/QCCalculator.dir/QCCalculator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/QCCalculator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Linking CXX executable ../../bin/QCCalculator cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/QCCalculator.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/QCCalculator.dir/link.d CMakeFiles/QCCalculator.dir/QCCalculator.cpp.o -o ../../bin/QCCalculator -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Built target QCCalculator make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/QCEmbedder.dir/build.make src/utils/CMakeFiles/QCEmbedder.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/QCEmbedder.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/QCEmbedder.dir/build.make src/utils/CMakeFiles/QCEmbedder.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Linking CXX executable ../../bin/NucleicAcidSearchEngine cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/NucleicAcidSearchEngine.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/NucleicAcidSearchEngine.dir/link.d CMakeFiles/NucleicAcidSearchEngine.dir/NucleicAcidSearchEngine.cpp.o -o ../../bin/NucleicAcidSearchEngine -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libboost_regex.so /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Built target NucleicAcidSearchEngine make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/QCExporter.dir/build.make src/utils/CMakeFiles/QCExporter.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/QCExporter.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/QCExporter.dir/build.make src/utils/CMakeFiles/QCExporter.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Building CXX object src/utils/CMakeFiles/QCEmbedder.dir/QCEmbedder.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/QCEmbedder.dir/QCEmbedder.cpp.o -MF CMakeFiles/QCEmbedder.dir/QCEmbedder.cpp.o.d -o CMakeFiles/QCEmbedder.dir/QCEmbedder.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/QCEmbedder.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Linking CXX executable ../../bin/QCEmbedder cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/QCEmbedder.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/QCEmbedder.dir/link.d CMakeFiles/QCEmbedder.dir/QCEmbedder.cpp.o -o ../../bin/QCEmbedder -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Built target QCEmbedder make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/QCExtractor.dir/build.make src/utils/CMakeFiles/QCExtractor.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/QCExtractor.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/QCExtractor.dir/build.make src/utils/CMakeFiles/QCExtractor.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Building CXX object src/utils/CMakeFiles/QCExporter.dir/QCExporter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/QCExporter.dir/QCExporter.cpp.o -MF CMakeFiles/QCExporter.dir/QCExporter.cpp.o.d -o CMakeFiles/QCExporter.dir/QCExporter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/QCExporter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Linking CXX executable ../../bin/QCExporter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/QCExporter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/QCExporter.dir/link.d CMakeFiles/QCExporter.dir/QCExporter.cpp.o -o ../../bin/QCExporter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Built target QCExporter make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/QCImporter.dir/build.make src/utils/CMakeFiles/QCImporter.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/QCImporter.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/QCImporter.dir/build.make src/utils/CMakeFiles/QCImporter.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Building CXX object src/utils/CMakeFiles/QCExtractor.dir/QCExtractor.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/QCExtractor.dir/QCExtractor.cpp.o -MF CMakeFiles/QCExtractor.dir/QCExtractor.cpp.o.d -o CMakeFiles/QCExtractor.dir/QCExtractor.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/QCExtractor.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Linking CXX executable ../../bin/QCExtractor cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/QCExtractor.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/QCExtractor.dir/link.d CMakeFiles/QCExtractor.dir/QCExtractor.cpp.o -o ../../bin/QCExtractor -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Built target QCExtractor make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/QCMerger.dir/build.make src/utils/CMakeFiles/QCMerger.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/QCMerger.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/QCMerger.dir/build.make src/utils/CMakeFiles/QCMerger.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Building CXX object src/utils/CMakeFiles/QCImporter.dir/QCImporter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/QCImporter.dir/QCImporter.cpp.o -MF CMakeFiles/QCImporter.dir/QCImporter.cpp.o.d -o CMakeFiles/QCImporter.dir/QCImporter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/QCImporter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Linking CXX executable ../../bin/QCImporter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/QCImporter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/QCImporter.dir/link.d CMakeFiles/QCImporter.dir/QCImporter.cpp.o -o ../../bin/QCImporter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Built target QCImporter make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/QCShrinker.dir/build.make src/utils/CMakeFiles/QCShrinker.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/QCShrinker.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/QCShrinker.dir/build.make src/utils/CMakeFiles/QCShrinker.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Building CXX object src/utils/CMakeFiles/QCMerger.dir/QCMerger.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/QCMerger.dir/QCMerger.cpp.o -MF CMakeFiles/QCMerger.dir/QCMerger.cpp.o.d -o CMakeFiles/QCMerger.dir/QCMerger.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/QCMerger.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Linking CXX executable ../../bin/QCMerger cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/QCMerger.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/QCMerger.dir/link.d CMakeFiles/QCMerger.dir/QCMerger.cpp.o -o ../../bin/QCMerger -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Built target QCMerger make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/ProteomicsLFQ.dir/build.make src/utils/CMakeFiles/ProteomicsLFQ.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/ProteomicsLFQ.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/ProteomicsLFQ.dir/build.make src/utils/CMakeFiles/ProteomicsLFQ.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Building CXX object src/utils/CMakeFiles/QCShrinker.dir/QCShrinker.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/QCShrinker.dir/QCShrinker.cpp.o -MF CMakeFiles/QCShrinker.dir/QCShrinker.cpp.o.d -o CMakeFiles/QCShrinker.dir/QCShrinker.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/QCShrinker.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Linking CXX executable ../../bin/QCShrinker cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/QCShrinker.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/QCShrinker.dir/link.d CMakeFiles/QCShrinker.dir/QCShrinker.cpp.o -o ../../bin/QCShrinker -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Built target QCShrinker make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/RNADigestor.dir/build.make src/utils/CMakeFiles/RNADigestor.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/RNADigestor.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/RNADigestor.dir/build.make src/utils/CMakeFiles/RNADigestor.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Building CXX object src/utils/CMakeFiles/RNADigestor.dir/RNADigestor.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/RNADigestor.dir/RNADigestor.cpp.o -MF CMakeFiles/RNADigestor.dir/RNADigestor.cpp.o.d -o CMakeFiles/RNADigestor.dir/RNADigestor.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/RNADigestor.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Linking CXX executable ../../bin/RNADigestor cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/RNADigestor.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/RNADigestor.dir/link.d CMakeFiles/RNADigestor.dir/RNADigestor.cpp.o -o ../../bin/RNADigestor -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Built target RNADigestor make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/RNAMassCalculator.dir/build.make src/utils/CMakeFiles/RNAMassCalculator.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/RNAMassCalculator.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/RNAMassCalculator.dir/build.make src/utils/CMakeFiles/RNAMassCalculator.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Building CXX object src/utils/CMakeFiles/RNAMassCalculator.dir/RNAMassCalculator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/RNAMassCalculator.dir/RNAMassCalculator.cpp.o -MF CMakeFiles/RNAMassCalculator.dir/RNAMassCalculator.cpp.o.d -o CMakeFiles/RNAMassCalculator.dir/RNAMassCalculator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/RNAMassCalculator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Linking CXX executable ../../bin/RNAMassCalculator cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/RNAMassCalculator.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/RNAMassCalculator.dir/link.d CMakeFiles/RNAMassCalculator.dir/RNAMassCalculator.cpp.o -o ../../bin/RNAMassCalculator -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Built target RNAMassCalculator make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/RNPxlXICFilter.dir/build.make src/utils/CMakeFiles/RNPxlXICFilter.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/RNPxlXICFilter.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/RNPxlXICFilter.dir/build.make src/utils/CMakeFiles/RNPxlXICFilter.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Building CXX object src/utils/CMakeFiles/RNPxlXICFilter.dir/RNPxlXICFilter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/RNPxlXICFilter.dir/RNPxlXICFilter.cpp.o -MF CMakeFiles/RNPxlXICFilter.dir/RNPxlXICFilter.cpp.o.d -o CMakeFiles/RNPxlXICFilter.dir/RNPxlXICFilter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/RNPxlXICFilter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Linking CXX executable ../../bin/RNPxlXICFilter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/RNPxlXICFilter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/RNPxlXICFilter.dir/link.d CMakeFiles/RNPxlXICFilter.dir/RNPxlXICFilter.cpp.o -o ../../bin/RNPxlXICFilter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Built target RNPxlXICFilter make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/RNPxlSearch.dir/build.make src/utils/CMakeFiles/RNPxlSearch.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/RNPxlSearch.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/RNPxlSearch.dir/build.make src/utils/CMakeFiles/RNPxlSearch.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Building CXX object src/utils/CMakeFiles/ProteomicsLFQ.dir/ProteomicsLFQ.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/ProteomicsLFQ.dir/ProteomicsLFQ.cpp.o -MF CMakeFiles/ProteomicsLFQ.dir/ProteomicsLFQ.cpp.o.d -o CMakeFiles/ProteomicsLFQ.dir/ProteomicsLFQ.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/ProteomicsLFQ.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Linking CXX executable ../../bin/ProteomicsLFQ cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/ProteomicsLFQ.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/ProteomicsLFQ.dir/link.d CMakeFiles/ProteomicsLFQ.dir/ProteomicsLFQ.cpp.o -o ../../bin/ProteomicsLFQ -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Built target ProteomicsLFQ make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/RTEvaluation.dir/build.make src/utils/CMakeFiles/RTEvaluation.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/RTEvaluation.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/RTEvaluation.dir/build.make src/utils/CMakeFiles/RTEvaluation.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Building CXX object src/utils/CMakeFiles/RTEvaluation.dir/RTEvaluation.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/RTEvaluation.dir/RTEvaluation.cpp.o -MF CMakeFiles/RTEvaluation.dir/RTEvaluation.cpp.o.d -o CMakeFiles/RTEvaluation.dir/RTEvaluation.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/RTEvaluation.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Building CXX object src/utils/CMakeFiles/RNPxlSearch.dir/RNPxlSearch.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/RNPxlSearch.dir/RNPxlSearch.cpp.o -MF CMakeFiles/RNPxlSearch.dir/RNPxlSearch.cpp.o.d -o CMakeFiles/RNPxlSearch.dir/RNPxlSearch.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/RNPxlSearch.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Linking CXX executable ../../bin/RTEvaluation cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/RTEvaluation.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/RTEvaluation.dir/link.d CMakeFiles/RTEvaluation.dir/RTEvaluation.cpp.o -o ../../bin/RTEvaluation -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Built target RTEvaluation make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/SemanticValidator.dir/build.make src/utils/CMakeFiles/SemanticValidator.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/SemanticValidator.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/SemanticValidator.dir/build.make src/utils/CMakeFiles/SemanticValidator.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Building CXX object src/utils/CMakeFiles/SemanticValidator.dir/SemanticValidator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/SemanticValidator.dir/SemanticValidator.cpp.o -MF CMakeFiles/SemanticValidator.dir/SemanticValidator.cpp.o.d -o CMakeFiles/SemanticValidator.dir/SemanticValidator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/SemanticValidator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Linking CXX executable ../../bin/SemanticValidator cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/SemanticValidator.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/SemanticValidator.dir/link.d CMakeFiles/SemanticValidator.dir/SemanticValidator.cpp.o -o ../../bin/SemanticValidator -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Built target SemanticValidator make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/SequenceCoverageCalculator.dir/build.make src/utils/CMakeFiles/SequenceCoverageCalculator.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/SequenceCoverageCalculator.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/SequenceCoverageCalculator.dir/build.make src/utils/CMakeFiles/SequenceCoverageCalculator.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Building CXX object src/utils/CMakeFiles/SequenceCoverageCalculator.dir/SequenceCoverageCalculator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/SequenceCoverageCalculator.dir/SequenceCoverageCalculator.cpp.o -MF CMakeFiles/SequenceCoverageCalculator.dir/SequenceCoverageCalculator.cpp.o.d -o CMakeFiles/SequenceCoverageCalculator.dir/SequenceCoverageCalculator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/SequenceCoverageCalculator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Linking CXX executable ../../bin/SequenceCoverageCalculator cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/SequenceCoverageCalculator.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/SequenceCoverageCalculator.dir/link.d CMakeFiles/SequenceCoverageCalculator.dir/SequenceCoverageCalculator.cpp.o -o ../../bin/SequenceCoverageCalculator -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Built target SequenceCoverageCalculator make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/SimpleSearchEngine.dir/build.make src/utils/CMakeFiles/SimpleSearchEngine.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/SimpleSearchEngine.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/SimpleSearchEngine.dir/build.make src/utils/CMakeFiles/SimpleSearchEngine.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Linking CXX executable ../../bin/RNPxlSearch cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/RNPxlSearch.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/RNPxlSearch.dir/link.d CMakeFiles/RNPxlSearch.dir/RNPxlSearch.cpp.o -o ../../bin/RNPxlSearch -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Built target RNPxlSearch make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/SiriusAdapter.dir/build.make src/utils/CMakeFiles/SiriusAdapter.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/SiriusAdapter.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/SiriusAdapter.dir/build.make src/utils/CMakeFiles/SiriusAdapter.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Building CXX object src/utils/CMakeFiles/SimpleSearchEngine.dir/SimpleSearchEngine.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/SimpleSearchEngine.dir/SimpleSearchEngine.cpp.o -MF CMakeFiles/SimpleSearchEngine.dir/SimpleSearchEngine.cpp.o.d -o CMakeFiles/SimpleSearchEngine.dir/SimpleSearchEngine.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/SimpleSearchEngine.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Linking CXX executable ../../bin/SimpleSearchEngine cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/SimpleSearchEngine.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/SimpleSearchEngine.dir/link.d CMakeFiles/SimpleSearchEngine.dir/SimpleSearchEngine.cpp.o -o ../../bin/SimpleSearchEngine -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Built target SimpleSearchEngine make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/SpecLibCreator.dir/build.make src/utils/CMakeFiles/SpecLibCreator.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/SpecLibCreator.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/SpecLibCreator.dir/build.make src/utils/CMakeFiles/SpecLibCreator.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Building CXX object src/utils/CMakeFiles/SpecLibCreator.dir/SpecLibCreator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/SpecLibCreator.dir/SpecLibCreator.cpp.o -MF CMakeFiles/SpecLibCreator.dir/SpecLibCreator.cpp.o.d -o CMakeFiles/SpecLibCreator.dir/SpecLibCreator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/SpecLibCreator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Building CXX object src/utils/CMakeFiles/SiriusAdapter.dir/SiriusAdapter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/SiriusAdapter.dir/SiriusAdapter.cpp.o -MF CMakeFiles/SiriusAdapter.dir/SiriusAdapter.cpp.o.d -o CMakeFiles/SiriusAdapter.dir/SiriusAdapter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/SiriusAdapter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Linking CXX executable ../../bin/SpecLibCreator cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpecLibCreator.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/SpecLibCreator.dir/link.d CMakeFiles/SpecLibCreator.dir/SpecLibCreator.cpp.o -o ../../bin/SpecLibCreator -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Built target SpecLibCreator make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/build.make src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/build.make src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Linking CXX executable ../../bin/SiriusAdapter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/SiriusAdapter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/SiriusAdapter.dir/link.d CMakeFiles/SiriusAdapter.dir/SiriusAdapter.cpp.o -o ../../bin/SiriusAdapter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Built target SiriusAdapter make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/StaticModification.dir/build.make src/utils/CMakeFiles/StaticModification.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/StaticModification.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/StaticModification.dir/build.make src/utils/CMakeFiles/StaticModification.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Building CXX object src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/SpectraSTSearchAdapter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/SpectraSTSearchAdapter.cpp.o -MF CMakeFiles/SpectraSTSearchAdapter.dir/SpectraSTSearchAdapter.cpp.o.d -o CMakeFiles/SpectraSTSearchAdapter.dir/SpectraSTSearchAdapter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/SpectraSTSearchAdapter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Linking CXX executable ../../bin/SpectraSTSearchAdapter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpectraSTSearchAdapter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/SpectraSTSearchAdapter.dir/link.d CMakeFiles/SpectraSTSearchAdapter.dir/SpectraSTSearchAdapter.cpp.o -o ../../bin/SpectraSTSearchAdapter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Built target SpectraSTSearchAdapter make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/build.make src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/build.make src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Building CXX object src/utils/CMakeFiles/StaticModification.dir/StaticModification.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/StaticModification.dir/StaticModification.cpp.o -MF CMakeFiles/StaticModification.dir/StaticModification.cpp.o.d -o CMakeFiles/StaticModification.dir/StaticModification.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/StaticModification.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Linking CXX executable ../../bin/StaticModification cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/StaticModification.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/StaticModification.dir/link.d CMakeFiles/StaticModification.dir/StaticModification.cpp.o -o ../../bin/StaticModification -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Built target StaticModification make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/TICCalculator.dir/build.make src/utils/CMakeFiles/TICCalculator.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/TICCalculator.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/TICCalculator.dir/build.make src/utils/CMakeFiles/TICCalculator.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Building CXX object src/utils/CMakeFiles/TICCalculator.dir/TICCalculator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/TICCalculator.dir/TICCalculator.cpp.o -MF CMakeFiles/TICCalculator.dir/TICCalculator.cpp.o.d -o CMakeFiles/TICCalculator.dir/TICCalculator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/TICCalculator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Building CXX object src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/SvmTheoreticalSpectrumGeneratorTrainer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/SvmTheoreticalSpectrumGeneratorTrainer.cpp.o -MF CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/SvmTheoreticalSpectrumGeneratorTrainer.cpp.o.d -o CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/SvmTheoreticalSpectrumGeneratorTrainer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/SvmTheoreticalSpectrumGeneratorTrainer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Linking CXX executable ../../bin/TICCalculator cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/TICCalculator.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/TICCalculator.dir/link.d CMakeFiles/TICCalculator.dir/TICCalculator.cpp.o -o ../../bin/TICCalculator -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Built target TICCalculator make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/TransformationEvaluation.dir/build.make src/utils/CMakeFiles/TransformationEvaluation.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/TransformationEvaluation.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/TransformationEvaluation.dir/build.make src/utils/CMakeFiles/TransformationEvaluation.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Linking CXX executable ../../bin/SvmTheoreticalSpectrumGeneratorTrainer cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/link.d CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/SvmTheoreticalSpectrumGeneratorTrainer.cpp.o -o ../../bin/SvmTheoreticalSpectrumGeneratorTrainer -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Built target SvmTheoreticalSpectrumGeneratorTrainer make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/TriqlerConverter.dir/build.make src/utils/CMakeFiles/TriqlerConverter.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/TriqlerConverter.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/TriqlerConverter.dir/build.make src/utils/CMakeFiles/TriqlerConverter.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Building CXX object src/utils/CMakeFiles/TransformationEvaluation.dir/TransformationEvaluation.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/TransformationEvaluation.dir/TransformationEvaluation.cpp.o -MF CMakeFiles/TransformationEvaluation.dir/TransformationEvaluation.cpp.o.d -o CMakeFiles/TransformationEvaluation.dir/TransformationEvaluation.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/TransformationEvaluation.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Linking CXX executable ../../bin/TransformationEvaluation cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/TransformationEvaluation.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/TransformationEvaluation.dir/link.d CMakeFiles/TransformationEvaluation.dir/TransformationEvaluation.cpp.o -o ../../bin/TransformationEvaluation -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Built target TransformationEvaluation make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/XMLValidator.dir/build.make src/utils/CMakeFiles/XMLValidator.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/XMLValidator.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/XMLValidator.dir/build.make src/utils/CMakeFiles/XMLValidator.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Building CXX object src/utils/CMakeFiles/TriqlerConverter.dir/TriqlerConverter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/TriqlerConverter.dir/TriqlerConverter.cpp.o -MF CMakeFiles/TriqlerConverter.dir/TriqlerConverter.cpp.o.d -o CMakeFiles/TriqlerConverter.dir/TriqlerConverter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/TriqlerConverter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Linking CXX executable ../../bin/TriqlerConverter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/TriqlerConverter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/TriqlerConverter.dir/link.d CMakeFiles/TriqlerConverter.dir/TriqlerConverter.cpp.o -o ../../bin/TriqlerConverter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Built target TriqlerConverter make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/TargetedFileConverter.dir/build.make src/utils/CMakeFiles/TargetedFileConverter.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/TargetedFileConverter.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/TargetedFileConverter.dir/build.make src/utils/CMakeFiles/TargetedFileConverter.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Building CXX object src/utils/CMakeFiles/XMLValidator.dir/XMLValidator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/XMLValidator.dir/XMLValidator.cpp.o -MF CMakeFiles/XMLValidator.dir/XMLValidator.cpp.o.d -o CMakeFiles/XMLValidator.dir/XMLValidator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/XMLValidator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Building CXX object src/utils/CMakeFiles/TargetedFileConverter.dir/TargetedFileConverter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/TargetedFileConverter.dir/TargetedFileConverter.cpp.o -MF CMakeFiles/TargetedFileConverter.dir/TargetedFileConverter.cpp.o.d -o CMakeFiles/TargetedFileConverter.dir/TargetedFileConverter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/TargetedFileConverter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Linking CXX executable ../../bin/XMLValidator cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/XMLValidator.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/XMLValidator.dir/link.d CMakeFiles/XMLValidator.dir/XMLValidator.cpp.o -o ../../bin/XMLValidator -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Built target XMLValidator make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/build.make src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/build.make src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Linking CXX executable ../../bin/TargetedFileConverter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/TargetedFileConverter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/TargetedFileConverter.dir/link.d CMakeFiles/TargetedFileConverter.dir/TargetedFileConverter.cpp.o -o ../../bin/TargetedFileConverter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Built target TargetedFileConverter make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/build.make src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/build.make src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Building CXX object src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/OpenSwathMzMLFileCacher.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/OpenSwathMzMLFileCacher.cpp.o -MF CMakeFiles/OpenSwathMzMLFileCacher.dir/OpenSwathMzMLFileCacher.cpp.o.d -o CMakeFiles/OpenSwathMzMLFileCacher.dir/OpenSwathMzMLFileCacher.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/OpenSwathMzMLFileCacher.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Building CXX object src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/OpenSwathDIAPreScoring.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/OpenSwathDIAPreScoring.cpp.o -MF CMakeFiles/OpenSwathDIAPreScoring.dir/OpenSwathDIAPreScoring.cpp.o.d -o CMakeFiles/OpenSwathDIAPreScoring.dir/OpenSwathDIAPreScoring.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/OpenSwathDIAPreScoring.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Linking CXX executable ../../bin/OpenSwathMzMLFileCacher cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathMzMLFileCacher.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/OpenSwathMzMLFileCacher.dir/link.d CMakeFiles/OpenSwathMzMLFileCacher.dir/OpenSwathMzMLFileCacher.cpp.o -o ../../bin/OpenSwathMzMLFileCacher -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Built target OpenSwathMzMLFileCacher make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/OpenSwathWorkflow.dir/build.make src/utils/CMakeFiles/OpenSwathWorkflow.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/OpenSwathWorkflow.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/OpenSwathWorkflow.dir/build.make src/utils/CMakeFiles/OpenSwathWorkflow.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Linking CXX executable ../../bin/OpenSwathDIAPreScoring cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathDIAPreScoring.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/OpenSwathDIAPreScoring.dir/link.d CMakeFiles/OpenSwathDIAPreScoring.dir/OpenSwathDIAPreScoring.cpp.o -o ../../bin/OpenSwathDIAPreScoring -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Built target OpenSwathDIAPreScoring make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/OpenSwathFileSplitter.dir/build.make src/utils/CMakeFiles/OpenSwathFileSplitter.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/OpenSwathFileSplitter.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/OpenSwathFileSplitter.dir/build.make src/utils/CMakeFiles/OpenSwathFileSplitter.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Building CXX object src/utils/CMakeFiles/OpenSwathFileSplitter.dir/OpenSwathFileSplitter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/OpenSwathFileSplitter.dir/OpenSwathFileSplitter.cpp.o -MF CMakeFiles/OpenSwathFileSplitter.dir/OpenSwathFileSplitter.cpp.o.d -o CMakeFiles/OpenSwathFileSplitter.dir/OpenSwathFileSplitter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/OpenSwathFileSplitter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Linking CXX executable ../../bin/OpenSwathFileSplitter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathFileSplitter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/OpenSwathFileSplitter.dir/link.d CMakeFiles/OpenSwathFileSplitter.dir/OpenSwathFileSplitter.cpp.o -o ../../bin/OpenSwathFileSplitter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Built target OpenSwathFileSplitter make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/build.make src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/build.make src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Building CXX object src/utils/CMakeFiles/OpenSwathWorkflow.dir/OpenSwathWorkflow.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/OpenSwathWorkflow.dir/OpenSwathWorkflow.cpp.o -MF CMakeFiles/OpenSwathWorkflow.dir/OpenSwathWorkflow.cpp.o.d -o CMakeFiles/OpenSwathWorkflow.dir/OpenSwathWorkflow.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/OpenSwathWorkflow.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Building CXX object src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/OpenSwathRewriteToFeatureXML.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/OpenSwathRewriteToFeatureXML.cpp.o -MF CMakeFiles/OpenSwathRewriteToFeatureXML.dir/OpenSwathRewriteToFeatureXML.cpp.o.d -o CMakeFiles/OpenSwathRewriteToFeatureXML.dir/OpenSwathRewriteToFeatureXML.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/OpenSwathRewriteToFeatureXML.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Linking CXX executable ../../bin/OpenSwathRewriteToFeatureXML cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathRewriteToFeatureXML.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/OpenSwathRewriteToFeatureXML.dir/link.d CMakeFiles/OpenSwathRewriteToFeatureXML.dir/OpenSwathRewriteToFeatureXML.cpp.o -o ../../bin/OpenSwathRewriteToFeatureXML -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Built target OpenSwathRewriteToFeatureXML make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/build.make src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/build.make src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Linking CXX executable ../../bin/OpenSwathWorkflow cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathWorkflow.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/OpenSwathWorkflow.dir/link.d CMakeFiles/OpenSwathWorkflow.dir/OpenSwathWorkflow.cpp.o -o ../../bin/OpenSwathWorkflow -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Built target OpenSwathWorkflow make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/DependInfo.cmake "--color=" Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/OpenMS_GUI_autogen/mocs_compilation.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/qrc_resources.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DDistanceItem.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DItem.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DTextItem.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DVerticalLineItem.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotations1DContainer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/INIFileEditorWindow.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/SwathWizardBase.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/TOPPASBase.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisPainter.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisTickCalculator.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisWidget.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ColorSelector.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/DataFilterDialog.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/FeatureEditDialog.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/HistogramDialog.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/LayerStatisticsDialog.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/ListFilterDialog.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Plot1DGoToDialog.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Plot1DPrefDialog.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Plot2DGoToDialog.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Plot2DPrefDialog.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Plot3DPrefDialog.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/PythonModuleRequirement.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/PythonSelector.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SaveImageDialog.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SpectrumAlignmentDialog.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SwathTabWidget.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASIOMappingDialog.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASInputFileDialog.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASInputFilesDialog.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASOutputFilesDialog.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASToolConfigDialog.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASVertexNameDialog.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPViewOpenDialog.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPViewPrefDialog.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/ToolsDialog.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIATreeTab.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DataSelectionTabs.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedTabBar.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedTabBarWidgetInterface.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedWorkspace.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/FilterList.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/GUIProgressLoggerImpl.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/HistogramWidget.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/INTERFACES/IPeptideIds.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/InputFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/InputFileList.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataBase.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataChrom.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataConsensus.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataFeature.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataIdent.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataPeak.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerListView.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ListEditor.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LogWindow.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/CommonDefs.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/ExternalProcessMBox.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/FilterableList.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/GUIHelpers.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MetaDataBrowser.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MultiGradient.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MultiGradientSelector.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/OutputDirectory.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Painter1DBase.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ParamEditor.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot1DCanvas.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot1DWidget.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot2DCanvas.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot2DWidget.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot3DCanvas.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot3DOpenGLCanvas.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot3DWidget.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/PlotCanvas.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/PlotWidget.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/RecentFilesMenu.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SequenceVisualizer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectraIDViewTab.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectraTreeTab.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SwathLibraryStats.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASEdge.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASInputFileListVertex.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASMergerVertex.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASOutputFileListVertex.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASResource.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASResources.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASScene.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASSplitterVertex.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASToolVertex.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASTreeView.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASVertex.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASWidget.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPViewMenu.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVControllerBase.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVDIATreeTabController.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVIdentificationViewController.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVSpectraViewController.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVToolDiscovery.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TableView.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TreeView.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISITORS/LayerStatistics.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/AcquisitionInfoVisualizer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/AcquisitionVisualizer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/BaseVisualizer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/BaseVisualizerGUI.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ContactPersonVisualizer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DataProcessingVisualizer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DigestionVisualizer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DocumentIdentifierVisualizer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/GradientVisualizer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/HPLCVisualizer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/InstrumentSettingsVisualizer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/InstrumentVisualizer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/IonDetectorVisualizer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/IonSourceVisualizer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MassAnalyzerVisualizer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MetaInfoDescriptionVisualizer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MetaInfoVisualizer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ModificationVisualizer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PeptideHitVisualizer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PrecursorVisualizer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProductVisualizer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProteinHitVisualizer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SampleVisualizer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ScanWindowVisualizer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SoftwareVisualizer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SourceFileVisualizer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SpectrumSettingsVisualizer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/TaggingVisualizer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/link.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenMS_GUI make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Building CXX object src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/MRMTransitionGroupPicker.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/MRMTransitionGroupPicker.cpp.o -MF CMakeFiles/MRMTransitionGroupPicker.dir/MRMTransitionGroupPicker.cpp.o.d -o CMakeFiles/MRMTransitionGroupPicker.dir/MRMTransitionGroupPicker.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/MRMTransitionGroupPicker.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Linking CXX executable ../../bin/MRMTransitionGroupPicker cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/MRMTransitionGroupPicker.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/MRMTransitionGroupPicker.dir/link.d CMakeFiles/MRMTransitionGroupPicker.dir/MRMTransitionGroupPicker.cpp.o -o ../../bin/MRMTransitionGroupPicker -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Built target MRMTransitionGroupPicker make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Linking CXX shared library ../../lib/libOpenMS_GUI.so cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenMS_GUI.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong 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CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DVerticalLineItem.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotations1DContainer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/INIFileEditorWindow.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/SwathWizardBase.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/TOPPASBase.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/DataFilterDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/FeatureEditDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/HistogramDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/LayerStatisticsDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/ListFilterDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/PythonModuleRequirement.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/PythonSelector.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SaveImageDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Plot1DGoToDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Plot1DPrefDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Plot2DGoToDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Plot2DPrefDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Plot3DPrefDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SpectrumAlignmentDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SwathTabWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASIOMappingDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASInputFileDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASInputFilesDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASOutputFilesDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASToolConfigDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASVertexNameDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPViewOpenDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPViewPrefDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/ToolsDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/INTERFACES/IPeptideIds.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/CommonDefs.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/ExternalProcessMBox.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/FilterableList.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/GUIHelpers.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/AcquisitionInfoVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/AcquisitionVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/BaseVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/BaseVisualizerGUI.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ContactPersonVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DataProcessingVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DigestionVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DocumentIdentifierVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/GradientVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/HPLCVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/InstrumentSettingsVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/InstrumentVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/IonDetectorVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/IonSourceVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MassAnalyzerVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MetaInfoDescriptionVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MetaInfoVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ModificationVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PeptideHitVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PrecursorVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProteinHitVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SampleVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ScanWindowVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SoftwareVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SourceFileVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SpectrumSettingsVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/TaggingVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProductVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISITORS/LayerStatistics.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisPainter.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisTickCalculator.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ColorSelector.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DataSelectionTabs.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIATreeTab.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedTabBar.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedTabBarWidgetInterface.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedWorkspace.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/FilterList.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/GUIProgressLoggerImpl.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/HistogramWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/InputFile.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/InputFileList.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerListView.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataBase.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataChrom.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataConsensus.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataFeature.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataIdent.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataPeak.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ListEditor.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LogWindow.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MetaDataBrowser.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MultiGradient.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MultiGradientSelector.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/OutputDirectory.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Painter1DBase.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ParamEditor.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot1DCanvas.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot1DWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot2DCanvas.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot2DWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot3DCanvas.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot3DOpenGLCanvas.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot3DWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/PlotCanvas.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/PlotWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/RecentFilesMenu.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SequenceVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectraIDViewTab.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectraTreeTab.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SwathLibraryStats.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TableView.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASEdge.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASInputFileListVertex.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASMergerVertex.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASOutputFileListVertex.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASResource.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASResources.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASScene.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASSplitterVertex.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASToolVertex.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASTreeView.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASVertex.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPViewMenu.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TreeView.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVDIATreeTabController.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVIdentificationViewController.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVSpectraViewController.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVControllerBase.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVToolDiscovery.cpp.o CMakeFiles/OpenMS_GUI.dir/qrc_resources.cpp.o -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so /usr/lib64/libQt5Svg.so.5.15.10 /usr/lib64/libQt5WebEngineWidgets.so.5.15.12 ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/libQt5WebEngineCore.so.5.15.12 /usr/lib64/libQt5WebChannel.so.5.15.10 /usr/lib64/libQt5Positioning.so.5.15.10 /usr/lib64/libQt5Quick.so.5.15.10 /usr/lib64/libQt5QmlModels.so.5.15.10 /usr/lib64/libQt5Qml.so.5.15.10 /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5PrintSupport.so.5.15.10 /usr/lib64/libQt5Widgets.so.5.15.10 /usr/lib64/libQt5Gui.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Built target OpenMS_GUI make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/INIUpdater.dir/build.make src/utils/CMakeFiles/INIUpdater.dir/depend /usr/bin/make -f src/utils/CMakeFiles/ImageCreator.dir/build.make src/utils/CMakeFiles/ImageCreator.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build 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'/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Building CXX object src/utils/CMakeFiles/INIUpdater.dir/INIUpdater.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem 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/builddir/build/BUILD/OpenMS-2.8.0/src/utils/INIUpdater.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Linking CXX executable ../../bin/INIUpdater cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/INIUpdater.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/INIUpdater.dir/link.d CMakeFiles/INIUpdater.dir/INIUpdater.cpp.o -o ../../bin/INIUpdater -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS_GUI.so ../../lib/libOpenMS.so /usr/lib64/libQt5Svg.so.5.15.10 /usr/lib64/libQt5WebEngineWidgets.so.5.15.12 ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/libQt5WebEngineCore.so.5.15.12 /usr/lib64/libQt5WebChannel.so.5.15.10 /usr/lib64/libQt5Positioning.so.5.15.10 /usr/lib64/libQt5Quick.so.5.15.10 /usr/lib64/libQt5QmlModels.so.5.15.10 /usr/lib64/libQt5Qml.so.5.15.10 /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5PrintSupport.so.5.15.10 /usr/lib64/libQt5Widgets.so.5.15.10 /usr/lib64/libQt5Gui.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Built target INIUpdater make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Building CXX object src/utils/CMakeFiles/ImageCreator.dir/ImageCreator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem 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--verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld 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/usr/lib64/libQt5Core.so.5.15.10 make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Built target ImageCreator make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/UTILS.dir/build.make src/utils/CMakeFiles/UTILS.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/UTILS.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/UTILS.dir/build.make src/utils/CMakeFiles/UTILS.dir/build make[3]: Nothing to 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'/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f CMakeFiles/Makefile2 src/openms_gui/CMakeFiles/GUI.dir/all /usr/bin/make -f src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build.make src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo /builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/DependInfo.cmake "--color=" Dependencies file "src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/link.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/compiler_depend.internal". 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Consolidate compiler generated dependencies of target OpenMS make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms/CMakeFiles/OpenMS.dir/build.make src/openms/CMakeFiles/OpenMS.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 0%] Linking CXX shared library ../../lib/libOpenMS.so cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenMS.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,--dependency-file,CMakeFiles/OpenMS.dir/link.d -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libOpenMS.so -o ../../lib/libOpenMS.so CMakeFiles/OpenMS.dir/OpenMS_autogen/mocs_compilation.cpp.o CMakeFiles/OpenMS.dir/source/INTERFACES_IMPL/MockImplementation.cpp.o CMakeFiles/OpenMS.dir/source/CONCEPT/ClassTest.cpp.o CMakeFiles/OpenMS.dir/source/CONCEPT/Exception.cpp.o 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CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.cpp.o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessTransforming.cpp.o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessQuadMZTransforming.cpp.o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.cpp.o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SimpleOpenMSSpectraAccessFactory.cpp.o CMakeFiles/OpenMS.dir/source/APPLICATIONS/ConsoleUtils.cpp.o CMakeFiles/OpenMS.dir/source/APPLICATIONS/INIUpdater.cpp.o CMakeFiles/OpenMS.dir/source/APPLICATIONS/ParameterInformation.cpp.o CMakeFiles/OpenMS.dir/source/APPLICATIONS/SearchEngineBase.cpp.o CMakeFiles/OpenMS.dir/source/APPLICATIONS/ToolHandler.cpp.o CMakeFiles/OpenMS.dir/source/APPLICATIONS/TOPPBase.cpp.o -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libglpk.so /usr/lib64/libboost_iostreams.so /usr/lib64/libboost_date_time.so /usr/lib64/libboost_math_c99.so /usr/lib64/libboost_regex.so /usr/lib64/libbz2.so /usr/lib64/libz.so /usr/lib64/libsqlite3.so /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/libWm5Core.so /usr/lib64/libWm5Mathematics.so /usr/lib64/libCbc.so /usr/lib64/libCgl.so /usr/lib64/libClp.so /usr/lib64/libCoinUtils.so /usr/lib64/libOsi.so /usr/lib64/libOsiClp.so /usr/lib64/libhdf5.so /usr/lib64/libhdf5_cpp.so /usr/lib64/libhdf5.so /usr/lib64/libhdf5_cpp.so make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Built target OpenMS make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build.make 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CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SampleVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ScanWindowVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SoftwareVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SourceFileVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SpectrumSettingsVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/TaggingVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProductVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISITORS/LayerStatistics.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisPainter.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisTickCalculator.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ColorSelector.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DataSelectionTabs.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIATreeTab.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedTabBar.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedTabBarWidgetInterface.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedWorkspace.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/FilterList.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/GUIProgressLoggerImpl.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/HistogramWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/InputFile.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/InputFileList.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerListView.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataBase.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataChrom.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataConsensus.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataFeature.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataIdent.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataPeak.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ListEditor.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LogWindow.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MetaDataBrowser.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MultiGradient.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MultiGradientSelector.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/OutputDirectory.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Painter1DBase.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ParamEditor.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot1DCanvas.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot1DWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot2DCanvas.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot2DWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot3DCanvas.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot3DOpenGLCanvas.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot3DWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/PlotCanvas.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/PlotWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/RecentFilesMenu.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SequenceVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectraIDViewTab.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectraTreeTab.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SwathLibraryStats.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TableView.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASEdge.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASInputFileListVertex.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASMergerVertex.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASOutputFileListVertex.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASResource.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASResources.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASScene.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASSplitterVertex.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASToolVertex.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASTreeView.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASVertex.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPViewMenu.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TreeView.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVDIATreeTabController.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVIdentificationViewController.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVSpectraViewController.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVControllerBase.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVToolDiscovery.cpp.o CMakeFiles/OpenMS_GUI.dir/qrc_resources.cpp.o -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so /usr/lib64/libQt5Svg.so.5.15.10 /usr/lib64/libQt5WebEngineWidgets.so.5.15.12 ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/libQt5WebEngineCore.so.5.15.12 /usr/lib64/libQt5WebChannel.so.5.15.10 /usr/lib64/libQt5Positioning.so.5.15.10 /usr/lib64/libQt5Quick.so.5.15.10 /usr/lib64/libQt5QmlModels.so.5.15.10 /usr/lib64/libQt5Qml.so.5.15.10 /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5PrintSupport.so.5.15.10 /usr/lib64/libQt5Widgets.so.5.15.10 /usr/lib64/libQt5Gui.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Built target OpenMS_GUI make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/TOPPView_autogen.dir/build.make src/openms_gui/CMakeFiles/TOPPView_autogen.dir/depend /usr/bin/make -f src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/build.make src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/build.make src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/TOPPView_autogen.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/TOPPView_autogen.dir/build.make src/openms_gui/CMakeFiles/TOPPView_autogen.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Automatic MOC for target INIFileEditor cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.cpp" AutoMoc: Generating MOC compilation "SRC:/build/src/openms_gui/INIFileEditor_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/AutogenUsed.txt" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Built target INIFileEditor_autogen make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/build.make src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Automatic MOC for target TOPPView cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/TOPPView_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.cpp" AutoMoc: Generating MOC compilation "SRC:/build/src/openms_gui/TOPPView_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/src/openms_gui/CMakeFiles/TOPPView_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/src/openms_gui/CMakeFiles/TOPPView_autogen.dir/AutogenUsed.txt" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Built target TOPPView_autogen make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/build.make src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/build /usr/bin/make -f src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/build.make src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/build.make src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Automatic MOC for target SwathWizard cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/SwathWizard.cpp" AutoMoc: Generating MOC compilation "SRC:/build/src/openms_gui/SwathWizard_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/AutogenUsed.txt" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Automatic MOC for target TOPPAS cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.cpp" AutoMoc: Generating MOC compilation "SRC:/build/src/openms_gui/TOPPAS_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/AutogenUsed.txt" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Built target SwathWizard_autogen make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/TOPPView.dir/build.make src/openms_gui/CMakeFiles/TOPPView.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Built target TOPPAS_autogen make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/INIFileEditor.dir/build.make src/openms_gui/CMakeFiles/INIFileEditor.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/TOPPView.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/TOPPView.dir/build.make src/openms_gui/CMakeFiles/TOPPView.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/INIFileEditor.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/INIFileEditor.dir/build.make src/openms_gui/CMakeFiles/INIFileEditor.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Building CXX object src/openms_gui/CMakeFiles/TOPPView.dir/TOPPView_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/TOPPView_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/TOPPView.dir/TOPPView_autogen/mocs_compilation.cpp.o -MF CMakeFiles/TOPPView.dir/TOPPView_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/TOPPView.dir/TOPPView_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/TOPPView_autogen/mocs_compilation.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Building CXX object src/openms_gui/CMakeFiles/INIFileEditor.dir/INIFileEditor_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/INIFileEditor_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/INIFileEditor.dir/INIFileEditor_autogen/mocs_compilation.cpp.o -MF CMakeFiles/INIFileEditor.dir/INIFileEditor_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/INIFileEditor.dir/INIFileEditor_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/INIFileEditor_autogen/mocs_compilation.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Building CXX object src/openms_gui/CMakeFiles/INIFileEditor.dir/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/INIFileEditor_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/INIFileEditor.dir/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.cpp.o -MF CMakeFiles/INIFileEditor.dir/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.cpp.o.d -o CMakeFiles/INIFileEditor.dir/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Linking CXX executable ../../bin/INIFileEditor cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/cmake -E cmake_link_script CMakeFiles/INIFileEditor.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/INIFileEditor.dir/link.d CMakeFiles/INIFileEditor.dir/INIFileEditor_autogen/mocs_compilation.cpp.o CMakeFiles/INIFileEditor.dir/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.cpp.o -o ../../bin/INIFileEditor -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS_GUI.so ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/libQt5Svg.so.5.15.10 /usr/lib64/libQt5WebEngineWidgets.so.5.15.12 /usr/lib64/libQt5WebEngineCore.so.5.15.12 /usr/lib64/libQt5WebChannel.so.5.15.10 /usr/lib64/libQt5Positioning.so.5.15.10 /usr/lib64/libQt5Quick.so.5.15.10 /usr/lib64/libQt5QmlModels.so.5.15.10 /usr/lib64/libQt5Qml.so.5.15.10 /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5PrintSupport.so.5.15.10 /usr/lib64/libQt5Widgets.so.5.15.10 /usr/lib64/libQt5Gui.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Built target INIFileEditor make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/SwathWizard.dir/build.make src/openms_gui/CMakeFiles/SwathWizard.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/SwathWizard.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/SwathWizard.dir/build.make src/openms_gui/CMakeFiles/SwathWizard.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Building CXX object src/openms_gui/CMakeFiles/SwathWizard.dir/SwathWizard_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/SwathWizard_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/SwathWizard.dir/SwathWizard_autogen/mocs_compilation.cpp.o -MF CMakeFiles/SwathWizard.dir/SwathWizard_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/SwathWizard.dir/SwathWizard_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/SwathWizard_autogen/mocs_compilation.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Building CXX object src/openms_gui/CMakeFiles/SwathWizard.dir/source/VISUAL/APPLICATIONS/GUITOOLS/SwathWizard.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/SwathWizard_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/SwathWizard.dir/source/VISUAL/APPLICATIONS/GUITOOLS/SwathWizard.cpp.o -MF CMakeFiles/SwathWizard.dir/source/VISUAL/APPLICATIONS/GUITOOLS/SwathWizard.cpp.o.d -o CMakeFiles/SwathWizard.dir/source/VISUAL/APPLICATIONS/GUITOOLS/SwathWizard.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/SwathWizard.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/SwathWizardBase.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/SwathWizard.cpp:125: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/SwathWizardBase.h:73:27: note: by 'OpenMS::SwathWizardBase& OpenMS::SwathWizardBase::operator=(const OpenMS::SwathWizardBase&)' 73 | class OPENMS_GUI_DLLAPI SwathWizardBase : | ^~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Linking CXX executable ../../bin/SwathWizard cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/cmake -E cmake_link_script CMakeFiles/SwathWizard.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/SwathWizard.dir/link.d CMakeFiles/SwathWizard.dir/SwathWizard_autogen/mocs_compilation.cpp.o CMakeFiles/SwathWizard.dir/source/VISUAL/APPLICATIONS/GUITOOLS/SwathWizard.cpp.o -o ../../bin/SwathWizard -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS_GUI.so ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/libQt5Svg.so.5.15.10 /usr/lib64/libQt5WebEngineWidgets.so.5.15.12 /usr/lib64/libQt5WebEngineCore.so.5.15.12 /usr/lib64/libQt5WebChannel.so.5.15.10 /usr/lib64/libQt5Positioning.so.5.15.10 /usr/lib64/libQt5Quick.so.5.15.10 /usr/lib64/libQt5QmlModels.so.5.15.10 /usr/lib64/libQt5Qml.so.5.15.10 /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5PrintSupport.so.5.15.10 /usr/lib64/libQt5Widgets.so.5.15.10 /usr/lib64/libQt5Gui.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Built target SwathWizard make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/TOPPAS.dir/build.make src/openms_gui/CMakeFiles/TOPPAS.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/TOPPAS.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/TOPPAS.dir/build.make src/openms_gui/CMakeFiles/TOPPAS.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Building CXX object src/openms_gui/CMakeFiles/TOPPAS.dir/TOPPAS_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/TOPPAS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/TOPPAS.dir/TOPPAS_autogen/mocs_compilation.cpp.o -MF CMakeFiles/TOPPAS.dir/TOPPAS_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/TOPPAS.dir/TOPPAS_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/TOPPAS_autogen/mocs_compilation.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Building CXX object src/openms_gui/CMakeFiles/TOPPView.dir/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/TOPPView_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/TOPPView.dir/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.cpp.o -MF CMakeFiles/TOPPView.dir/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.cpp.o.d -o CMakeFiles/TOPPView.dir/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPViewBase.h:48, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.cpp:55: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /usr/include/qt5/QtCore/qglobal.h:142, from /usr/include/qt5/QtGui/qtguiglobal.h:43, from /usr/include/qt5/QtWidgets/qtwidgetsglobal.h:43, from /usr/include/qt5/QtWidgets/qsplashscreen.h:43, from /usr/include/qt5/QtWidgets/QSplashScreen:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.cpp:51: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPViewBase.h:42: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:135:27: note: by 'OpenMS::PlotCanvas& OpenMS::PlotCanvas::operator=(const OpenMS::PlotCanvas&)' 135 | class OPENMS_GUI_DLLAPI PlotCanvas : | ^~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPViewBase.h:124:27: note: by 'OpenMS::TOPPViewBase& OpenMS::TOPPViewBase::operator=(const OpenMS::TOPPViewBase&)' 124 | class OPENMS_GUI_DLLAPI TOPPViewBase : | ^~~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Building CXX object src/openms_gui/CMakeFiles/TOPPAS.dir/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/TOPPAS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/TOPPAS.dir/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.cpp.o -MF CMakeFiles/TOPPAS.dir/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.cpp.o.d -o CMakeFiles/TOPPAS.dir/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPASBase.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.cpp:73: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPASBase.h:79:27: note: by 'OpenMS::TOPPASBase& OpenMS::TOPPASBase::operator=(const OpenMS::TOPPASBase&)' 79 | class OPENMS_GUI_DLLAPI TOPPASBase : | ^~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Linking CXX executable ../../bin/TOPPView cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/cmake -E cmake_link_script CMakeFiles/TOPPView.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/TOPPView.dir/link.d CMakeFiles/TOPPView.dir/TOPPView_autogen/mocs_compilation.cpp.o CMakeFiles/TOPPView.dir/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.cpp.o -o ../../bin/TOPPView -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS_GUI.so ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/libQt5Svg.so.5.15.10 /usr/lib64/libQt5WebEngineWidgets.so.5.15.12 /usr/lib64/libQt5WebEngineCore.so.5.15.12 /usr/lib64/libQt5WebChannel.so.5.15.10 /usr/lib64/libQt5Positioning.so.5.15.10 /usr/lib64/libQt5Quick.so.5.15.10 /usr/lib64/libQt5QmlModels.so.5.15.10 /usr/lib64/libQt5Qml.so.5.15.10 /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5PrintSupport.so.5.15.10 /usr/lib64/libQt5Widgets.so.5.15.10 /usr/lib64/libQt5Gui.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Built target TOPPView make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Linking CXX executable ../../bin/TOPPAS cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/cmake -E cmake_link_script CMakeFiles/TOPPAS.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/TOPPAS.dir/link.d CMakeFiles/TOPPAS.dir/TOPPAS_autogen/mocs_compilation.cpp.o CMakeFiles/TOPPAS.dir/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.cpp.o -o ../../bin/TOPPAS -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS_GUI.so ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/libQt5Svg.so.5.15.10 /usr/lib64/libQt5WebEngineWidgets.so.5.15.12 /usr/lib64/libQt5WebEngineCore.so.5.15.12 /usr/lib64/libQt5WebChannel.so.5.15.10 /usr/lib64/libQt5Positioning.so.5.15.10 /usr/lib64/libQt5Quick.so.5.15.10 /usr/lib64/libQt5QmlModels.so.5.15.10 /usr/lib64/libQt5Qml.so.5.15.10 /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5PrintSupport.so.5.15.10 /usr/lib64/libQt5Widgets.so.5.15.10 /usr/lib64/libQt5Gui.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Built target TOPPAS make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/GUI.dir/build.make src/openms_gui/CMakeFiles/GUI.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/GUI.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/GUI.dir/build.make src/openms_gui/CMakeFiles/GUI.dir/build make[3]: Nothing to be done for 'src/openms_gui/CMakeFiles/GUI.dir/build'. make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Built target GUI make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[1]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/OpenMS-2.8.0/build/CMakeFiles 0 make[1]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.unEByW + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64 ++ dirname /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd OpenMS-2.8.0 + export LD_LIBRARY_PATH=/builddir/build/BUILD/OpenMS-2.8.0/lib: + LD_LIBRARY_PATH=/builddir/build/BUILD/OpenMS-2.8.0/lib: + /usr/bin/xvfb-run -a /usr/bin/make install DESTDIR=/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64 'INSTALL=/usr/bin/install -p' -C build make: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/cmake -S/builddir/build/BUILD/OpenMS-2.8.0 -B/builddir/build/BUILD/OpenMS-2.8.0/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/OpenMS-2.8.0/build/CMakeFiles /builddir/build/BUILD/OpenMS-2.8.0/build//CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all make[1]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build.make src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo /builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build.make src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 0%] Linking CXX shared library ../../lib/libOpenSwathAlgo.so cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathAlgo.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,--dependency-file,CMakeFiles/OpenSwathAlgo.dir/link.d -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libOpenSwathAlgo.so -o ../../lib/libOpenSwathAlgo.so CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/Scoring.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/StatsHelpers.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/DataFrameWriter.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/MockObjects.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/SpectrumHelpers.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/TransitionHelper.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/Transitions.cpp.o -Wl,-rpath,::::::::::::::: make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 0%] Built target OpenSwathAlgo /usr/bin/make -f src/openms/CMakeFiles/OpenMS_autogen.dir/build.make src/openms/CMakeFiles/OpenMS_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/openms /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms/CMakeFiles/OpenMS_autogen.dir/build.make src/openms/CMakeFiles/OpenMS_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 0%] Automatic MOC for target OpenMS cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 0%] Built target OpenMS_autogen /usr/bin/make -f src/openms/CMakeFiles/OpenMS.dir/build.make src/openms/CMakeFiles/OpenMS.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/openms /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms/CMakeFiles/OpenMS.dir/build.make src/openms/CMakeFiles/OpenMS.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 0%] Linking CXX shared library ../../lib/libOpenMS.so cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenMS.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,--dependency-file,CMakeFiles/OpenMS.dir/link.d -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libOpenMS.so -o ../../lib/libOpenMS.so CMakeFiles/OpenMS.dir/OpenMS_autogen/mocs_compilation.cpp.o CMakeFiles/OpenMS.dir/source/INTERFACES_IMPL/MockImplementation.cpp.o CMakeFiles/OpenMS.dir/source/CONCEPT/ClassTest.cpp.o CMakeFiles/OpenMS.dir/source/CONCEPT/Exception.cpp.o CMakeFiles/OpenMS.dir/source/CONCEPT/FuzzyStringComparator.cpp.o CMakeFiles/OpenMS.dir/source/CONCEPT/GlobalExceptionHandler.cpp.o 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CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.cpp.o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SimpleOpenMSSpectraAccessFactory.cpp.o CMakeFiles/OpenMS.dir/source/APPLICATIONS/ConsoleUtils.cpp.o CMakeFiles/OpenMS.dir/source/APPLICATIONS/INIUpdater.cpp.o CMakeFiles/OpenMS.dir/source/APPLICATIONS/ParameterInformation.cpp.o CMakeFiles/OpenMS.dir/source/APPLICATIONS/SearchEngineBase.cpp.o CMakeFiles/OpenMS.dir/source/APPLICATIONS/ToolHandler.cpp.o CMakeFiles/OpenMS.dir/source/APPLICATIONS/TOPPBase.cpp.o -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libglpk.so /usr/lib64/libboost_iostreams.so /usr/lib64/libboost_date_time.so /usr/lib64/libboost_math_c99.so /usr/lib64/libboost_regex.so /usr/lib64/libbz2.so /usr/lib64/libz.so /usr/lib64/libsqlite3.so /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/libWm5Core.so /usr/lib64/libWm5Mathematics.so /usr/lib64/libCbc.so /usr/lib64/libCgl.so /usr/lib64/libClp.so /usr/lib64/libCoinUtils.so /usr/lib64/libOsi.so /usr/lib64/libOsiClp.so /usr/lib64/libhdf5.so /usr/lib64/libhdf5_cpp.so /usr/lib64/libhdf5.so /usr/lib64/libhdf5_cpp.so make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 56%] Built target OpenMS /usr/bin/make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui 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CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisPainter.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisTickCalculator.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ColorSelector.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DataSelectionTabs.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIATreeTab.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedTabBar.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedTabBarWidgetInterface.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedWorkspace.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/FilterList.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/GUIProgressLoggerImpl.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/HistogramWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/InputFile.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/InputFileList.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerListView.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataBase.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataChrom.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataConsensus.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataFeature.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataIdent.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataPeak.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ListEditor.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LogWindow.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MetaDataBrowser.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MultiGradient.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MultiGradientSelector.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/OutputDirectory.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Painter1DBase.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ParamEditor.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot1DCanvas.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot1DWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot2DCanvas.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot2DWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot3DCanvas.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot3DOpenGLCanvas.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot3DWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/PlotCanvas.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/PlotWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/RecentFilesMenu.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SequenceVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectraIDViewTab.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectraTreeTab.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SwathLibraryStats.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TableView.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASEdge.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASInputFileListVertex.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASMergerVertex.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASOutputFileListVertex.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASResource.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASResources.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASScene.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASSplitterVertex.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASToolVertex.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASTreeView.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASVertex.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPViewMenu.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TreeView.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVDIATreeTabController.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVIdentificationViewController.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVSpectraViewController.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVControllerBase.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVToolDiscovery.cpp.o CMakeFiles/OpenMS_GUI.dir/qrc_resources.cpp.o -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so /usr/lib64/libQt5Svg.so.5.15.10 /usr/lib64/libQt5WebEngineWidgets.so.5.15.12 ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/libQt5WebEngineCore.so.5.15.12 /usr/lib64/libQt5WebChannel.so.5.15.10 /usr/lib64/libQt5Positioning.so.5.15.10 /usr/lib64/libQt5Quick.so.5.15.10 /usr/lib64/libQt5QmlModels.so.5.15.10 /usr/lib64/libQt5Qml.so.5.15.10 /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5PrintSupport.so.5.15.10 /usr/lib64/libQt5Widgets.so.5.15.10 /usr/lib64/libQt5Gui.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Built target OpenMS_GUI /usr/bin/make -f src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/build.make src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/build.make src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Automatic MOC for target INIFileEditor cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Built target INIFileEditor_autogen /usr/bin/make -f src/openms_gui/CMakeFiles/INIFileEditor.dir/build.make src/openms_gui/CMakeFiles/INIFileEditor.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/INIFileEditor.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/INIFileEditor.dir/build.make src/openms_gui/CMakeFiles/INIFileEditor.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Linking CXX executable ../../bin/INIFileEditor cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/cmake -E cmake_link_script CMakeFiles/INIFileEditor.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/INIFileEditor.dir/link.d CMakeFiles/INIFileEditor.dir/INIFileEditor_autogen/mocs_compilation.cpp.o CMakeFiles/INIFileEditor.dir/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.cpp.o -o ../../bin/INIFileEditor -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS_GUI.so ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/libQt5Svg.so.5.15.10 /usr/lib64/libQt5WebEngineWidgets.so.5.15.12 /usr/lib64/libQt5WebEngineCore.so.5.15.12 /usr/lib64/libQt5WebChannel.so.5.15.10 /usr/lib64/libQt5Positioning.so.5.15.10 /usr/lib64/libQt5Quick.so.5.15.10 /usr/lib64/libQt5QmlModels.so.5.15.10 /usr/lib64/libQt5Qml.so.5.15.10 /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5PrintSupport.so.5.15.10 /usr/lib64/libQt5Widgets.so.5.15.10 /usr/lib64/libQt5Gui.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Built target INIFileEditor /usr/bin/make -f src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/build.make src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/build.make src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Automatic MOC for target SwathWizard cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Built target SwathWizard_autogen /usr/bin/make -f src/openms_gui/CMakeFiles/SwathWizard.dir/build.make src/openms_gui/CMakeFiles/SwathWizard.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/SwathWizard.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/SwathWizard.dir/build.make src/openms_gui/CMakeFiles/SwathWizard.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Linking CXX executable ../../bin/SwathWizard cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/cmake -E cmake_link_script CMakeFiles/SwathWizard.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/SwathWizard.dir/link.d CMakeFiles/SwathWizard.dir/SwathWizard_autogen/mocs_compilation.cpp.o CMakeFiles/SwathWizard.dir/source/VISUAL/APPLICATIONS/GUITOOLS/SwathWizard.cpp.o -o ../../bin/SwathWizard -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS_GUI.so ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/libQt5Svg.so.5.15.10 /usr/lib64/libQt5WebEngineWidgets.so.5.15.12 /usr/lib64/libQt5WebEngineCore.so.5.15.12 /usr/lib64/libQt5WebChannel.so.5.15.10 /usr/lib64/libQt5Positioning.so.5.15.10 /usr/lib64/libQt5Quick.so.5.15.10 /usr/lib64/libQt5QmlModels.so.5.15.10 /usr/lib64/libQt5Qml.so.5.15.10 /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5PrintSupport.so.5.15.10 /usr/lib64/libQt5Widgets.so.5.15.10 /usr/lib64/libQt5Gui.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Built target SwathWizard /usr/bin/make -f src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/build.make src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/build.make src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Automatic MOC for target TOPPAS cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Built target TOPPAS_autogen /usr/bin/make -f src/openms_gui/CMakeFiles/TOPPAS.dir/build.make src/openms_gui/CMakeFiles/TOPPAS.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/TOPPAS.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/TOPPAS.dir/build.make src/openms_gui/CMakeFiles/TOPPAS.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Linking CXX executable ../../bin/TOPPAS cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/cmake -E cmake_link_script CMakeFiles/TOPPAS.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/TOPPAS.dir/link.d CMakeFiles/TOPPAS.dir/TOPPAS_autogen/mocs_compilation.cpp.o CMakeFiles/TOPPAS.dir/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.cpp.o -o ../../bin/TOPPAS -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS_GUI.so ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/libQt5Svg.so.5.15.10 /usr/lib64/libQt5WebEngineWidgets.so.5.15.12 /usr/lib64/libQt5WebEngineCore.so.5.15.12 /usr/lib64/libQt5WebChannel.so.5.15.10 /usr/lib64/libQt5Positioning.so.5.15.10 /usr/lib64/libQt5Quick.so.5.15.10 /usr/lib64/libQt5QmlModels.so.5.15.10 /usr/lib64/libQt5Qml.so.5.15.10 /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5PrintSupport.so.5.15.10 /usr/lib64/libQt5Widgets.so.5.15.10 /usr/lib64/libQt5Gui.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Built target TOPPAS /usr/bin/make -f src/openms_gui/CMakeFiles/TOPPView_autogen.dir/build.make src/openms_gui/CMakeFiles/TOPPView_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/TOPPView_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/TOPPView_autogen.dir/build.make src/openms_gui/CMakeFiles/TOPPView_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Automatic MOC for target TOPPView cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/TOPPView_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Built target TOPPView_autogen /usr/bin/make -f src/openms_gui/CMakeFiles/TOPPView.dir/build.make src/openms_gui/CMakeFiles/TOPPView.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/TOPPView.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/TOPPView.dir/build.make src/openms_gui/CMakeFiles/TOPPView.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Linking CXX executable ../../bin/TOPPView cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/cmake -E cmake_link_script CMakeFiles/TOPPView.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/TOPPView.dir/link.d CMakeFiles/TOPPView.dir/TOPPView_autogen/mocs_compilation.cpp.o CMakeFiles/TOPPView.dir/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.cpp.o -o ../../bin/TOPPView -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS_GUI.so ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/libQt5Svg.so.5.15.10 /usr/lib64/libQt5WebEngineWidgets.so.5.15.12 /usr/lib64/libQt5WebEngineCore.so.5.15.12 /usr/lib64/libQt5WebChannel.so.5.15.10 /usr/lib64/libQt5Positioning.so.5.15.10 /usr/lib64/libQt5Quick.so.5.15.10 /usr/lib64/libQt5QmlModels.so.5.15.10 /usr/lib64/libQt5Qml.so.5.15.10 /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5PrintSupport.so.5.15.10 /usr/lib64/libQt5Widgets.so.5.15.10 /usr/lib64/libQt5Gui.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Built target TOPPView /usr/bin/make -f src/topp/CMakeFiles/BaselineFilter.dir/build.make src/topp/CMakeFiles/BaselineFilter.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/BaselineFilter.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/BaselineFilter.dir/build.make src/topp/CMakeFiles/BaselineFilter.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Linking CXX executable ../../bin/BaselineFilter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/BaselineFilter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/BaselineFilter.dir/link.d CMakeFiles/BaselineFilter.dir/BaselineFilter.cpp.o -o ../../bin/BaselineFilter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Built target BaselineFilter /usr/bin/make -f src/topp/CMakeFiles/CometAdapter.dir/build.make src/topp/CMakeFiles/CometAdapter.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/CometAdapter.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/CometAdapter.dir/build.make src/topp/CMakeFiles/CometAdapter.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Linking CXX executable ../../bin/CometAdapter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/CometAdapter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/CometAdapter.dir/link.d CMakeFiles/CometAdapter.dir/CometAdapter.cpp.o -o ../../bin/CometAdapter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Built target CometAdapter /usr/bin/make -f src/topp/CMakeFiles/CompNovo.dir/build.make src/topp/CMakeFiles/CompNovo.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/CompNovo.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/CompNovo.dir/build.make src/topp/CMakeFiles/CompNovo.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Linking CXX executable ../../bin/CompNovo cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/CompNovo.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/CompNovo.dir/link.d CMakeFiles/CompNovo.dir/CompNovo.cpp.o -o ../../bin/CompNovo -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Built target CompNovo /usr/bin/make -f src/topp/CMakeFiles/CompNovoCID.dir/build.make src/topp/CMakeFiles/CompNovoCID.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/CompNovoCID.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/CompNovoCID.dir/build.make src/topp/CMakeFiles/CompNovoCID.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Linking CXX executable ../../bin/CompNovoCID cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/CompNovoCID.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/CompNovoCID.dir/link.d CMakeFiles/CompNovoCID.dir/CompNovoCID.cpp.o -o ../../bin/CompNovoCID -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Built target CompNovoCID /usr/bin/make -f src/topp/CMakeFiles/ConsensusID.dir/build.make src/topp/CMakeFiles/ConsensusID.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/ConsensusID.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/ConsensusID.dir/build.make src/topp/CMakeFiles/ConsensusID.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Linking CXX executable ../../bin/ConsensusID cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/ConsensusID.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/ConsensusID.dir/link.d CMakeFiles/ConsensusID.dir/ConsensusID.cpp.o -o ../../bin/ConsensusID -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Built target ConsensusID /usr/bin/make -f src/topp/CMakeFiles/ConsensusMapNormalizer.dir/build.make src/topp/CMakeFiles/ConsensusMapNormalizer.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/ConsensusMapNormalizer.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/ConsensusMapNormalizer.dir/build.make src/topp/CMakeFiles/ConsensusMapNormalizer.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Linking CXX executable ../../bin/ConsensusMapNormalizer cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/ConsensusMapNormalizer.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/ConsensusMapNormalizer.dir/link.d CMakeFiles/ConsensusMapNormalizer.dir/ConsensusMapNormalizer.cpp.o -o ../../bin/ConsensusMapNormalizer -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Built target ConsensusMapNormalizer /usr/bin/make -f src/topp/CMakeFiles/CruxAdapter.dir/build.make src/topp/CMakeFiles/CruxAdapter.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/CruxAdapter.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/CruxAdapter.dir/build.make src/topp/CMakeFiles/CruxAdapter.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Linking CXX executable ../../bin/CruxAdapter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/CruxAdapter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/CruxAdapter.dir/link.d CMakeFiles/CruxAdapter.dir/CruxAdapter.cpp.o -o ../../bin/CruxAdapter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Built target CruxAdapter /usr/bin/make -f src/topp/CMakeFiles/DatabaseSuitability.dir/build.make src/topp/CMakeFiles/DatabaseSuitability.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/DatabaseSuitability.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/DatabaseSuitability.dir/build.make src/topp/CMakeFiles/DatabaseSuitability.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Linking CXX executable ../../bin/DatabaseSuitability cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/DatabaseSuitability.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/DatabaseSuitability.dir/link.d CMakeFiles/DatabaseSuitability.dir/DatabaseSuitability.cpp.o -o ../../bin/DatabaseSuitability -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Built target DatabaseSuitability /usr/bin/make -f src/topp/CMakeFiles/Decharger.dir/build.make src/topp/CMakeFiles/Decharger.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/Decharger.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/Decharger.dir/build.make src/topp/CMakeFiles/Decharger.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Linking CXX executable ../../bin/Decharger cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/Decharger.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/Decharger.dir/link.d CMakeFiles/Decharger.dir/Decharger.cpp.o -o ../../bin/Decharger -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Built target Decharger /usr/bin/make -f src/topp/CMakeFiles/DTAExtractor.dir/build.make src/topp/CMakeFiles/DTAExtractor.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/DTAExtractor.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/DTAExtractor.dir/build.make src/topp/CMakeFiles/DTAExtractor.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Linking CXX executable ../../bin/DTAExtractor cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/DTAExtractor.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/DTAExtractor.dir/link.d CMakeFiles/DTAExtractor.dir/DTAExtractor.cpp.o -o ../../bin/DTAExtractor -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Built target DTAExtractor /usr/bin/make -f src/topp/CMakeFiles/EICExtractor.dir/build.make src/topp/CMakeFiles/EICExtractor.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/EICExtractor.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/EICExtractor.dir/build.make src/topp/CMakeFiles/EICExtractor.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Linking CXX executable ../../bin/EICExtractor cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/EICExtractor.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/EICExtractor.dir/link.d CMakeFiles/EICExtractor.dir/EICExtractor.cpp.o -o ../../bin/EICExtractor -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Built target EICExtractor /usr/bin/make -f src/topp/CMakeFiles/ExternalCalibration.dir/build.make src/topp/CMakeFiles/ExternalCalibration.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/ExternalCalibration.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/ExternalCalibration.dir/build.make src/topp/CMakeFiles/ExternalCalibration.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Linking CXX executable ../../bin/ExternalCalibration cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/ExternalCalibration.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/ExternalCalibration.dir/link.d CMakeFiles/ExternalCalibration.dir/ExternalCalibration.cpp.o -o ../../bin/ExternalCalibration -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 74%] Built target ExternalCalibration /usr/bin/make -f src/topp/CMakeFiles/FalseDiscoveryRate.dir/build.make src/topp/CMakeFiles/FalseDiscoveryRate.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/FalseDiscoveryRate.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FalseDiscoveryRate.dir/build.make src/topp/CMakeFiles/FalseDiscoveryRate.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 74%] Linking CXX executable ../../bin/FalseDiscoveryRate cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FalseDiscoveryRate.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/FalseDiscoveryRate.dir/link.d CMakeFiles/FalseDiscoveryRate.dir/FalseDiscoveryRate.cpp.o -o ../../bin/FalseDiscoveryRate -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 74%] Built target FalseDiscoveryRate /usr/bin/make -f src/topp/CMakeFiles/FeatureFinderCentroided.dir/build.make src/topp/CMakeFiles/FeatureFinderCentroided.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/FeatureFinderCentroided.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FeatureFinderCentroided.dir/build.make src/topp/CMakeFiles/FeatureFinderCentroided.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 74%] Linking CXX executable ../../bin/FeatureFinderCentroided cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureFinderCentroided.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/FeatureFinderCentroided.dir/link.d CMakeFiles/FeatureFinderCentroided.dir/FeatureFinderCentroided.cpp.o -o ../../bin/FeatureFinderCentroided -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 74%] Built target FeatureFinderCentroided /usr/bin/make -f src/topp/CMakeFiles/FeatureFinderIdentification.dir/build.make src/topp/CMakeFiles/FeatureFinderIdentification.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/FeatureFinderIdentification.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FeatureFinderIdentification.dir/build.make src/topp/CMakeFiles/FeatureFinderIdentification.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 74%] Linking CXX executable ../../bin/FeatureFinderIdentification cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureFinderIdentification.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/FeatureFinderIdentification.dir/link.d CMakeFiles/FeatureFinderIdentification.dir/FeatureFinderIdentification.cpp.o -o ../../bin/FeatureFinderIdentification -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 74%] Built target FeatureFinderIdentification /usr/bin/make -f src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/build.make src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/build.make src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 74%] Linking CXX executable ../../bin/FeatureFinderIsotopeWavelet cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureFinderIsotopeWavelet.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/FeatureFinderIsotopeWavelet.dir/link.d CMakeFiles/FeatureFinderIsotopeWavelet.dir/FeatureFinderIsotopeWavelet.cpp.o -o ../../bin/FeatureFinderIsotopeWavelet -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 74%] Built target FeatureFinderIsotopeWavelet /usr/bin/make -f src/topp/CMakeFiles/FeatureFinderMetabo.dir/build.make src/topp/CMakeFiles/FeatureFinderMetabo.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/FeatureFinderMetabo.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FeatureFinderMetabo.dir/build.make src/topp/CMakeFiles/FeatureFinderMetabo.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 74%] Linking CXX executable ../../bin/FeatureFinderMetabo cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureFinderMetabo.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/FeatureFinderMetabo.dir/link.d CMakeFiles/FeatureFinderMetabo.dir/FeatureFinderMetabo.cpp.o -o ../../bin/FeatureFinderMetabo -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 74%] Built target FeatureFinderMetabo /usr/bin/make -f src/topp/CMakeFiles/FeatureFinderMRM.dir/build.make src/topp/CMakeFiles/FeatureFinderMRM.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/FeatureFinderMRM.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FeatureFinderMRM.dir/build.make src/topp/CMakeFiles/FeatureFinderMRM.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Linking CXX executable ../../bin/FeatureFinderMRM cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureFinderMRM.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/FeatureFinderMRM.dir/link.d CMakeFiles/FeatureFinderMRM.dir/FeatureFinderMRM.cpp.o -o ../../bin/FeatureFinderMRM -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Built target FeatureFinderMRM /usr/bin/make -f src/topp/CMakeFiles/FeatureFinderMultiplex.dir/build.make src/topp/CMakeFiles/FeatureFinderMultiplex.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/FeatureFinderMultiplex.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FeatureFinderMultiplex.dir/build.make src/topp/CMakeFiles/FeatureFinderMultiplex.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Linking CXX executable ../../bin/FeatureFinderMultiplex cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureFinderMultiplex.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/FeatureFinderMultiplex.dir/link.d CMakeFiles/FeatureFinderMultiplex.dir/FeatureFinderMultiplex.cpp.o -o ../../bin/FeatureFinderMultiplex -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Built target FeatureFinderMultiplex /usr/bin/make -f src/topp/CMakeFiles/FeatureLinkerLabeled.dir/build.make src/topp/CMakeFiles/FeatureLinkerLabeled.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/FeatureLinkerLabeled.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FeatureLinkerLabeled.dir/build.make src/topp/CMakeFiles/FeatureLinkerLabeled.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Linking CXX executable ../../bin/FeatureLinkerLabeled cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureLinkerLabeled.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/FeatureLinkerLabeled.dir/link.d CMakeFiles/FeatureLinkerLabeled.dir/FeatureLinkerLabeled.cpp.o -o ../../bin/FeatureLinkerLabeled -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Built target FeatureLinkerLabeled /usr/bin/make -f src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Linking CXX executable ../../bin/FeatureLinkerUnlabeled cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureLinkerUnlabeled.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/FeatureLinkerUnlabeled.dir/link.d CMakeFiles/FeatureLinkerUnlabeled.dir/FeatureLinkerUnlabeled.cpp.o -o ../../bin/FeatureLinkerUnlabeled -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Built target FeatureLinkerUnlabeled /usr/bin/make -f src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Linking CXX executable ../../bin/FeatureLinkerUnlabeledKD cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureLinkerUnlabeledKD.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/FeatureLinkerUnlabeledKD.dir/link.d CMakeFiles/FeatureLinkerUnlabeledKD.dir/FeatureLinkerUnlabeledKD.cpp.o -o ../../bin/FeatureLinkerUnlabeledKD -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Built target FeatureLinkerUnlabeledKD /usr/bin/make -f src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Linking CXX executable ../../bin/FeatureLinkerUnlabeledQT cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureLinkerUnlabeledQT.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/FeatureLinkerUnlabeledQT.dir/link.d CMakeFiles/FeatureLinkerUnlabeledQT.dir/FeatureLinkerUnlabeledQT.cpp.o -o ../../bin/FeatureLinkerUnlabeledQT -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Built target FeatureLinkerUnlabeledQT /usr/bin/make -f src/topp/CMakeFiles/FidoAdapter.dir/build.make src/topp/CMakeFiles/FidoAdapter.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/FidoAdapter.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FidoAdapter.dir/build.make src/topp/CMakeFiles/FidoAdapter.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Linking CXX executable ../../bin/FidoAdapter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FidoAdapter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/FidoAdapter.dir/link.d CMakeFiles/FidoAdapter.dir/FidoAdapter.cpp.o -o ../../bin/FidoAdapter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Built target FidoAdapter /usr/bin/make -f src/topp/CMakeFiles/FileConverter.dir/build.make src/topp/CMakeFiles/FileConverter.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/FileConverter.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FileConverter.dir/build.make src/topp/CMakeFiles/FileConverter.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Linking CXX executable ../../bin/FileConverter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FileConverter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/FileConverter.dir/link.d CMakeFiles/FileConverter.dir/FileConverter.cpp.o -o ../../bin/FileConverter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Built target FileConverter /usr/bin/make -f src/topp/CMakeFiles/FileFilter.dir/build.make src/topp/CMakeFiles/FileFilter.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/FileFilter.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FileFilter.dir/build.make src/topp/CMakeFiles/FileFilter.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Linking CXX executable ../../bin/FileFilter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FileFilter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/FileFilter.dir/link.d CMakeFiles/FileFilter.dir/FileFilter.cpp.o -o ../../bin/FileFilter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Built target FileFilter /usr/bin/make -f src/topp/CMakeFiles/FileInfo.dir/build.make src/topp/CMakeFiles/FileInfo.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/FileInfo.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FileInfo.dir/build.make src/topp/CMakeFiles/FileInfo.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Linking CXX executable ../../bin/FileInfo cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FileInfo.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/FileInfo.dir/link.d CMakeFiles/FileInfo.dir/FileInfo.cpp.o -o ../../bin/FileInfo -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Built target FileInfo /usr/bin/make -f src/topp/CMakeFiles/FileMerger.dir/build.make src/topp/CMakeFiles/FileMerger.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/FileMerger.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FileMerger.dir/build.make src/topp/CMakeFiles/FileMerger.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Linking CXX executable ../../bin/FileMerger cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FileMerger.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/FileMerger.dir/link.d CMakeFiles/FileMerger.dir/FileMerger.cpp.o -o ../../bin/FileMerger -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so /usr/lib64/libboost_regex.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Built target FileMerger /usr/bin/make -f src/topp/CMakeFiles/GenericWrapper.dir/build.make src/topp/CMakeFiles/GenericWrapper.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/GenericWrapper.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/GenericWrapper.dir/build.make src/topp/CMakeFiles/GenericWrapper.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Linking CXX executable ../../bin/GenericWrapper cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/GenericWrapper.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/GenericWrapper.dir/link.d CMakeFiles/GenericWrapper.dir/GenericWrapper.cpp.o -o ../../bin/GenericWrapper -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Built target GenericWrapper /usr/bin/make -f src/topp/CMakeFiles/GNPSExport.dir/build.make src/topp/CMakeFiles/GNPSExport.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/GNPSExport.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/GNPSExport.dir/build.make src/topp/CMakeFiles/GNPSExport.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Linking CXX executable ../../bin/GNPSExport cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/GNPSExport.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/GNPSExport.dir/link.d CMakeFiles/GNPSExport.dir/GNPSExport.cpp.o -o ../../bin/GNPSExport -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Built target GNPSExport /usr/bin/make -f src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/build.make src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/build.make src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Linking CXX executable ../../bin/HighResPrecursorMassCorrector cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/HighResPrecursorMassCorrector.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/HighResPrecursorMassCorrector.dir/link.d CMakeFiles/HighResPrecursorMassCorrector.dir/HighResPrecursorMassCorrector.cpp.o -o ../../bin/HighResPrecursorMassCorrector -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Built target HighResPrecursorMassCorrector /usr/bin/make -f src/topp/CMakeFiles/IDConflictResolver.dir/build.make src/topp/CMakeFiles/IDConflictResolver.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/IDConflictResolver.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/IDConflictResolver.dir/build.make src/topp/CMakeFiles/IDConflictResolver.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Linking CXX executable ../../bin/IDConflictResolver cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDConflictResolver.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/IDConflictResolver.dir/link.d CMakeFiles/IDConflictResolver.dir/IDConflictResolver.cpp.o -o ../../bin/IDConflictResolver -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Built target IDConflictResolver /usr/bin/make -f src/topp/CMakeFiles/IDFileConverter.dir/build.make src/topp/CMakeFiles/IDFileConverter.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/IDFileConverter.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/IDFileConverter.dir/build.make src/topp/CMakeFiles/IDFileConverter.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Linking CXX executable ../../bin/IDFileConverter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDFileConverter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/IDFileConverter.dir/link.d CMakeFiles/IDFileConverter.dir/IDFileConverter.cpp.o -o ../../bin/IDFileConverter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Built target IDFileConverter /usr/bin/make -f src/topp/CMakeFiles/IDFilter.dir/build.make src/topp/CMakeFiles/IDFilter.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/IDFilter.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/IDFilter.dir/build.make src/topp/CMakeFiles/IDFilter.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Linking CXX executable ../../bin/IDFilter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDFilter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/IDFilter.dir/link.d CMakeFiles/IDFilter.dir/IDFilter.cpp.o -o ../../bin/IDFilter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Built target IDFilter /usr/bin/make -f src/topp/CMakeFiles/IDMapper.dir/build.make src/topp/CMakeFiles/IDMapper.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/IDMapper.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/IDMapper.dir/build.make src/topp/CMakeFiles/IDMapper.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Linking CXX executable ../../bin/IDMapper cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDMapper.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/IDMapper.dir/link.d CMakeFiles/IDMapper.dir/IDMapper.cpp.o -o ../../bin/IDMapper -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Built target IDMapper /usr/bin/make -f src/topp/CMakeFiles/IDMerger.dir/build.make src/topp/CMakeFiles/IDMerger.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/IDMerger.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/IDMerger.dir/build.make src/topp/CMakeFiles/IDMerger.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Linking CXX executable ../../bin/IDMerger cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDMerger.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/IDMerger.dir/link.d CMakeFiles/IDMerger.dir/IDMerger.cpp.o -o ../../bin/IDMerger -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Built target IDMerger /usr/bin/make -f src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/build.make src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/build.make src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Linking CXX executable ../../bin/IDPosteriorErrorProbability cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDPosteriorErrorProbability.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/IDPosteriorErrorProbability.dir/link.d CMakeFiles/IDPosteriorErrorProbability.dir/IDPosteriorErrorProbability.cpp.o -o ../../bin/IDPosteriorErrorProbability -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Built target IDPosteriorErrorProbability /usr/bin/make -f src/topp/CMakeFiles/IDRipper.dir/build.make src/topp/CMakeFiles/IDRipper.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/IDRipper.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/IDRipper.dir/build.make src/topp/CMakeFiles/IDRipper.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Linking CXX executable ../../bin/IDRipper cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDRipper.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/IDRipper.dir/link.d CMakeFiles/IDRipper.dir/IDRipper.cpp.o -o ../../bin/IDRipper -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Built target IDRipper /usr/bin/make -f src/topp/CMakeFiles/IDRTCalibration.dir/build.make src/topp/CMakeFiles/IDRTCalibration.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/IDRTCalibration.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/IDRTCalibration.dir/build.make src/topp/CMakeFiles/IDRTCalibration.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Linking CXX executable ../../bin/IDRTCalibration cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDRTCalibration.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/IDRTCalibration.dir/link.d CMakeFiles/IDRTCalibration.dir/IDRTCalibration.cpp.o -o ../../bin/IDRTCalibration -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Built target IDRTCalibration /usr/bin/make -f src/topp/CMakeFiles/InclusionExclusionListCreator.dir/build.make src/topp/CMakeFiles/InclusionExclusionListCreator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/InclusionExclusionListCreator.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/InclusionExclusionListCreator.dir/build.make src/topp/CMakeFiles/InclusionExclusionListCreator.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Linking CXX executable ../../bin/InclusionExclusionListCreator cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/InclusionExclusionListCreator.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/InclusionExclusionListCreator.dir/link.d CMakeFiles/InclusionExclusionListCreator.dir/InclusionExclusionListCreator.cpp.o -o ../../bin/InclusionExclusionListCreator -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Built target InclusionExclusionListCreator /usr/bin/make -f src/topp/CMakeFiles/InternalCalibration.dir/build.make src/topp/CMakeFiles/InternalCalibration.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/InternalCalibration.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/InternalCalibration.dir/build.make src/topp/CMakeFiles/InternalCalibration.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Linking CXX executable ../../bin/InternalCalibration cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/InternalCalibration.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/InternalCalibration.dir/link.d CMakeFiles/InternalCalibration.dir/InternalCalibration.cpp.o -o ../../bin/InternalCalibration -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Built target InternalCalibration /usr/bin/make -f src/topp/CMakeFiles/IsobaricAnalyzer.dir/build.make src/topp/CMakeFiles/IsobaricAnalyzer.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/IsobaricAnalyzer.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/IsobaricAnalyzer.dir/build.make src/topp/CMakeFiles/IsobaricAnalyzer.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Linking CXX executable ../../bin/IsobaricAnalyzer cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/IsobaricAnalyzer.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/IsobaricAnalyzer.dir/link.d CMakeFiles/IsobaricAnalyzer.dir/IsobaricAnalyzer.cpp.o -o ../../bin/IsobaricAnalyzer -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Built target IsobaricAnalyzer /usr/bin/make -f src/topp/CMakeFiles/LuciphorAdapter.dir/build.make src/topp/CMakeFiles/LuciphorAdapter.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/LuciphorAdapter.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/LuciphorAdapter.dir/build.make src/topp/CMakeFiles/LuciphorAdapter.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Linking CXX executable ../../bin/LuciphorAdapter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/LuciphorAdapter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/LuciphorAdapter.dir/link.d CMakeFiles/LuciphorAdapter.dir/LuciphorAdapter.cpp.o -o ../../bin/LuciphorAdapter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Built target LuciphorAdapter /usr/bin/make -f src/topp/CMakeFiles/MapAlignerIdentification.dir/build.make src/topp/CMakeFiles/MapAlignerIdentification.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/MapAlignerIdentification.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MapAlignerIdentification.dir/build.make src/topp/CMakeFiles/MapAlignerIdentification.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Linking CXX executable ../../bin/MapAlignerIdentification cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MapAlignerIdentification.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/MapAlignerIdentification.dir/link.d CMakeFiles/MapAlignerIdentification.dir/MapAlignerIdentification.cpp.o -o ../../bin/MapAlignerIdentification -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Built target MapAlignerIdentification /usr/bin/make -f src/topp/CMakeFiles/MapAlignerPoseClustering.dir/build.make src/topp/CMakeFiles/MapAlignerPoseClustering.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/MapAlignerPoseClustering.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MapAlignerPoseClustering.dir/build.make src/topp/CMakeFiles/MapAlignerPoseClustering.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Linking CXX executable ../../bin/MapAlignerPoseClustering cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MapAlignerPoseClustering.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/MapAlignerPoseClustering.dir/link.d CMakeFiles/MapAlignerPoseClustering.dir/MapAlignerPoseClustering.cpp.o -o ../../bin/MapAlignerPoseClustering -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Built target MapAlignerPoseClustering /usr/bin/make -f src/topp/CMakeFiles/MapAlignerSpectrum.dir/build.make src/topp/CMakeFiles/MapAlignerSpectrum.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/MapAlignerSpectrum.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MapAlignerSpectrum.dir/build.make src/topp/CMakeFiles/MapAlignerSpectrum.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Linking CXX executable ../../bin/MapAlignerSpectrum cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MapAlignerSpectrum.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/MapAlignerSpectrum.dir/link.d CMakeFiles/MapAlignerSpectrum.dir/MapAlignerSpectrum.cpp.o -o ../../bin/MapAlignerSpectrum -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Built target MapAlignerSpectrum /usr/bin/make -f src/topp/CMakeFiles/MapAlignerTreeGuided.dir/build.make src/topp/CMakeFiles/MapAlignerTreeGuided.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/MapAlignerTreeGuided.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MapAlignerTreeGuided.dir/build.make src/topp/CMakeFiles/MapAlignerTreeGuided.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Linking CXX executable ../../bin/MapAlignerTreeGuided cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MapAlignerTreeGuided.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/MapAlignerTreeGuided.dir/link.d CMakeFiles/MapAlignerTreeGuided.dir/MapAlignerTreeGuided.cpp.o -o ../../bin/MapAlignerTreeGuided -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Built target MapAlignerTreeGuided /usr/bin/make -f src/topp/CMakeFiles/MapNormalizer.dir/build.make src/topp/CMakeFiles/MapNormalizer.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/MapNormalizer.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MapNormalizer.dir/build.make src/topp/CMakeFiles/MapNormalizer.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Linking CXX executable ../../bin/MapNormalizer cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MapNormalizer.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/MapNormalizer.dir/link.d CMakeFiles/MapNormalizer.dir/MapNormalizer.cpp.o -o ../../bin/MapNormalizer -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Built target MapNormalizer /usr/bin/make -f src/topp/CMakeFiles/MapRTTransformer.dir/build.make src/topp/CMakeFiles/MapRTTransformer.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/MapRTTransformer.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MapRTTransformer.dir/build.make src/topp/CMakeFiles/MapRTTransformer.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Linking CXX executable ../../bin/MapRTTransformer cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MapRTTransformer.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/MapRTTransformer.dir/link.d CMakeFiles/MapRTTransformer.dir/MapRTTransformer.cpp.o -o ../../bin/MapRTTransformer -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Built target MapRTTransformer /usr/bin/make -f src/topp/CMakeFiles/MapStatistics.dir/build.make src/topp/CMakeFiles/MapStatistics.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/MapStatistics.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MapStatistics.dir/build.make src/topp/CMakeFiles/MapStatistics.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Linking CXX executable ../../bin/MapStatistics cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MapStatistics.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/MapStatistics.dir/link.d CMakeFiles/MapStatistics.dir/MapStatistics.cpp.o -o ../../bin/MapStatistics -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Built target MapStatistics /usr/bin/make -f src/topp/CMakeFiles/MaRaClusterAdapter.dir/build.make src/topp/CMakeFiles/MaRaClusterAdapter.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/MaRaClusterAdapter.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MaRaClusterAdapter.dir/build.make src/topp/CMakeFiles/MaRaClusterAdapter.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Linking CXX executable ../../bin/MaRaClusterAdapter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MaRaClusterAdapter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/MaRaClusterAdapter.dir/link.d CMakeFiles/MaRaClusterAdapter.dir/MaRaClusterAdapter.cpp.o -o ../../bin/MaRaClusterAdapter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Built target MaRaClusterAdapter /usr/bin/make -f src/topp/CMakeFiles/MascotAdapter.dir/build.make src/topp/CMakeFiles/MascotAdapter.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/MascotAdapter.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MascotAdapter.dir/build.make src/topp/CMakeFiles/MascotAdapter.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Linking CXX executable ../../bin/MascotAdapter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MascotAdapter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/MascotAdapter.dir/link.d CMakeFiles/MascotAdapter.dir/MascotAdapter.cpp.o -o ../../bin/MascotAdapter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Built target MascotAdapter /usr/bin/make -f src/topp/CMakeFiles/MascotAdapterOnline.dir/build.make src/topp/CMakeFiles/MascotAdapterOnline.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/MascotAdapterOnline.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MascotAdapterOnline.dir/build.make src/topp/CMakeFiles/MascotAdapterOnline.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Linking CXX executable ../../bin/MascotAdapterOnline cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MascotAdapterOnline.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/MascotAdapterOnline.dir/link.d CMakeFiles/MascotAdapterOnline.dir/MascotAdapterOnline.cpp.o -o ../../bin/MascotAdapterOnline -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Built target MascotAdapterOnline /usr/bin/make -f src/topp/CMakeFiles/MassTraceExtractor.dir/build.make src/topp/CMakeFiles/MassTraceExtractor.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/MassTraceExtractor.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MassTraceExtractor.dir/build.make src/topp/CMakeFiles/MassTraceExtractor.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Linking CXX executable ../../bin/MassTraceExtractor cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MassTraceExtractor.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/MassTraceExtractor.dir/link.d CMakeFiles/MassTraceExtractor.dir/MassTraceExtractor.cpp.o -o ../../bin/MassTraceExtractor -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Built target MassTraceExtractor /usr/bin/make -f src/topp/CMakeFiles/MRMMapper.dir/build.make src/topp/CMakeFiles/MRMMapper.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/MRMMapper.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MRMMapper.dir/build.make src/topp/CMakeFiles/MRMMapper.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Linking CXX executable ../../bin/MRMMapper cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MRMMapper.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/MRMMapper.dir/link.d CMakeFiles/MRMMapper.dir/MRMMapper.cpp.o -o ../../bin/MRMMapper -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 79%] Built target MRMMapper /usr/bin/make -f src/topp/CMakeFiles/MSGFPlusAdapter.dir/build.make src/topp/CMakeFiles/MSGFPlusAdapter.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/MSGFPlusAdapter.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MSGFPlusAdapter.dir/build.make src/topp/CMakeFiles/MSGFPlusAdapter.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 79%] Linking CXX executable ../../bin/MSGFPlusAdapter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MSGFPlusAdapter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/MSGFPlusAdapter.dir/link.d CMakeFiles/MSGFPlusAdapter.dir/MSGFPlusAdapter.cpp.o -o ../../bin/MSGFPlusAdapter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 79%] Built target MSGFPlusAdapter /usr/bin/make -f src/topp/CMakeFiles/MyriMatchAdapter.dir/build.make src/topp/CMakeFiles/MyriMatchAdapter.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/MyriMatchAdapter.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MyriMatchAdapter.dir/build.make src/topp/CMakeFiles/MyriMatchAdapter.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 79%] Linking CXX executable ../../bin/MyriMatchAdapter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MyriMatchAdapter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/MyriMatchAdapter.dir/link.d CMakeFiles/MyriMatchAdapter.dir/MyriMatchAdapter.cpp.o -o ../../bin/MyriMatchAdapter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 79%] Built target MyriMatchAdapter /usr/bin/make -f src/topp/CMakeFiles/MzTabExporter.dir/build.make src/topp/CMakeFiles/MzTabExporter.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/MzTabExporter.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MzTabExporter.dir/build.make src/topp/CMakeFiles/MzTabExporter.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Linking CXX executable ../../bin/MzTabExporter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MzTabExporter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/MzTabExporter.dir/link.d CMakeFiles/MzTabExporter.dir/MzTabExporter.cpp.o -o ../../bin/MzTabExporter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Built target MzTabExporter /usr/bin/make -f src/topp/CMakeFiles/NoiseFilterGaussian.dir/build.make src/topp/CMakeFiles/NoiseFilterGaussian.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/NoiseFilterGaussian.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/NoiseFilterGaussian.dir/build.make src/topp/CMakeFiles/NoiseFilterGaussian.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Linking CXX executable ../../bin/NoiseFilterGaussian cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/NoiseFilterGaussian.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/NoiseFilterGaussian.dir/link.d CMakeFiles/NoiseFilterGaussian.dir/NoiseFilterGaussian.cpp.o -o ../../bin/NoiseFilterGaussian -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Built target NoiseFilterGaussian /usr/bin/make -f src/topp/CMakeFiles/NoiseFilterSGolay.dir/build.make src/topp/CMakeFiles/NoiseFilterSGolay.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/NoiseFilterSGolay.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/NoiseFilterSGolay.dir/build.make src/topp/CMakeFiles/NoiseFilterSGolay.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Linking CXX executable ../../bin/NoiseFilterSGolay cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/NoiseFilterSGolay.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/NoiseFilterSGolay.dir/link.d CMakeFiles/NoiseFilterSGolay.dir/NoiseFilterSGolay.cpp.o -o ../../bin/NoiseFilterSGolay -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Built target NoiseFilterSGolay /usr/bin/make -f src/topp/CMakeFiles/OMSSAAdapter.dir/build.make src/topp/CMakeFiles/OMSSAAdapter.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/OMSSAAdapter.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/OMSSAAdapter.dir/build.make src/topp/CMakeFiles/OMSSAAdapter.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Linking CXX executable ../../bin/OMSSAAdapter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/OMSSAAdapter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/OMSSAAdapter.dir/link.d CMakeFiles/OMSSAAdapter.dir/OMSSAAdapter.cpp.o -o ../../bin/OMSSAAdapter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Built target OMSSAAdapter /usr/bin/make -f src/topp/CMakeFiles/OpenPepXL.dir/build.make src/topp/CMakeFiles/OpenPepXL.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/OpenPepXL.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/OpenPepXL.dir/build.make src/topp/CMakeFiles/OpenPepXL.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Linking CXX executable ../../bin/OpenPepXL cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenPepXL.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/OpenPepXL.dir/link.d CMakeFiles/OpenPepXL.dir/OpenPepXL.cpp.o -o ../../bin/OpenPepXL -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Built target OpenPepXL /usr/bin/make -f src/topp/CMakeFiles/OpenPepXLLF.dir/build.make src/topp/CMakeFiles/OpenPepXLLF.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/OpenPepXLLF.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/OpenPepXLLF.dir/build.make src/topp/CMakeFiles/OpenPepXLLF.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Linking CXX executable ../../bin/OpenPepXLLF cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenPepXLLF.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/OpenPepXLLF.dir/link.d CMakeFiles/OpenPepXLLF.dir/OpenPepXLLF.cpp.o -o ../../bin/OpenPepXLLF -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Built target OpenPepXLLF /usr/bin/make -f src/topp/CMakeFiles/OpenSwathAnalyzer.dir/build.make src/topp/CMakeFiles/OpenSwathAnalyzer.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/OpenSwathAnalyzer.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/OpenSwathAnalyzer.dir/build.make src/topp/CMakeFiles/OpenSwathAnalyzer.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Linking CXX executable ../../bin/OpenSwathAnalyzer cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathAnalyzer.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/OpenSwathAnalyzer.dir/link.d CMakeFiles/OpenSwathAnalyzer.dir/OpenSwathAnalyzer.cpp.o -o ../../bin/OpenSwathAnalyzer -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Built target OpenSwathAnalyzer /usr/bin/make -f src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/build.make src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/build.make src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Linking CXX executable ../../bin/OpenSwathAssayGenerator cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathAssayGenerator.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/OpenSwathAssayGenerator.dir/link.d CMakeFiles/OpenSwathAssayGenerator.dir/OpenSwathAssayGenerator.cpp.o -o ../../bin/OpenSwathAssayGenerator -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Built target OpenSwathAssayGenerator /usr/bin/make -f src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/build.make src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/build.make src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Linking CXX executable ../../bin/OpenSwathChromatogramExtractor cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathChromatogramExtractor.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/OpenSwathChromatogramExtractor.dir/link.d CMakeFiles/OpenSwathChromatogramExtractor.dir/OpenSwathChromatogramExtractor.cpp.o -o ../../bin/OpenSwathChromatogramExtractor -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Built target OpenSwathChromatogramExtractor /usr/bin/make -f src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/build.make src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/build.make src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Linking CXX executable ../../bin/OpenSwathConfidenceScoring cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathConfidenceScoring.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/OpenSwathConfidenceScoring.dir/link.d CMakeFiles/OpenSwathConfidenceScoring.dir/OpenSwathConfidenceScoring.cpp.o -o ../../bin/OpenSwathConfidenceScoring -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Built target OpenSwathConfidenceScoring /usr/bin/make -f src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/build.make src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/build.make src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Linking CXX executable ../../bin/OpenSwathDecoyGenerator cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathDecoyGenerator.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/OpenSwathDecoyGenerator.dir/link.d CMakeFiles/OpenSwathDecoyGenerator.dir/OpenSwathDecoyGenerator.cpp.o -o ../../bin/OpenSwathDecoyGenerator -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Built target OpenSwathDecoyGenerator /usr/bin/make -f src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/build.make src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/build.make src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Linking CXX executable ../../bin/OpenSwathFeatureXMLToTSV cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathFeatureXMLToTSV.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/OpenSwathFeatureXMLToTSV.dir/link.d CMakeFiles/OpenSwathFeatureXMLToTSV.dir/OpenSwathFeatureXMLToTSV.cpp.o -o ../../bin/OpenSwathFeatureXMLToTSV -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Built target OpenSwathFeatureXMLToTSV /usr/bin/make -f src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/build.make src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/build.make src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Linking CXX executable ../../bin/OpenSwathRTNormalizer cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathRTNormalizer.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/OpenSwathRTNormalizer.dir/link.d CMakeFiles/OpenSwathRTNormalizer.dir/OpenSwathRTNormalizer.cpp.o -o ../../bin/OpenSwathRTNormalizer -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Built target OpenSwathRTNormalizer /usr/bin/make -f src/topp/CMakeFiles/PeakPickerHiRes.dir/build.make src/topp/CMakeFiles/PeakPickerHiRes.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/PeakPickerHiRes.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/PeakPickerHiRes.dir/build.make src/topp/CMakeFiles/PeakPickerHiRes.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Linking CXX executable ../../bin/PeakPickerHiRes cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/PeakPickerHiRes.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/PeakPickerHiRes.dir/link.d CMakeFiles/PeakPickerHiRes.dir/PeakPickerHiRes.cpp.o -o ../../bin/PeakPickerHiRes -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Built target PeakPickerHiRes /usr/bin/make -f src/topp/CMakeFiles/PeakPickerWavelet.dir/build.make src/topp/CMakeFiles/PeakPickerWavelet.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/PeakPickerWavelet.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/PeakPickerWavelet.dir/build.make src/topp/CMakeFiles/PeakPickerWavelet.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Linking CXX executable ../../bin/PeakPickerWavelet cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/PeakPickerWavelet.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/PeakPickerWavelet.dir/link.d CMakeFiles/PeakPickerWavelet.dir/PeakPickerWavelet.cpp.o -o ../../bin/PeakPickerWavelet -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Built target PeakPickerWavelet /usr/bin/make -f src/topp/CMakeFiles/PepNovoAdapter.dir/build.make src/topp/CMakeFiles/PepNovoAdapter.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/PepNovoAdapter.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/PepNovoAdapter.dir/build.make src/topp/CMakeFiles/PepNovoAdapter.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Linking CXX executable ../../bin/PepNovoAdapter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/PepNovoAdapter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/PepNovoAdapter.dir/link.d CMakeFiles/PepNovoAdapter.dir/PepNovoAdapter.cpp.o -o ../../bin/PepNovoAdapter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Built target PepNovoAdapter /usr/bin/make -f src/topp/CMakeFiles/PeptideIndexer.dir/build.make src/topp/CMakeFiles/PeptideIndexer.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/PeptideIndexer.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/PeptideIndexer.dir/build.make src/topp/CMakeFiles/PeptideIndexer.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Linking CXX executable ../../bin/PeptideIndexer cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/PeptideIndexer.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/PeptideIndexer.dir/link.d CMakeFiles/PeptideIndexer.dir/PeptideIndexer.cpp.o -o ../../bin/PeptideIndexer -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Built target PeptideIndexer /usr/bin/make -f src/topp/CMakeFiles/PercolatorAdapter.dir/build.make src/topp/CMakeFiles/PercolatorAdapter.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/PercolatorAdapter.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/PercolatorAdapter.dir/build.make src/topp/CMakeFiles/PercolatorAdapter.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Linking CXX executable ../../bin/PercolatorAdapter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/PercolatorAdapter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/PercolatorAdapter.dir/link.d CMakeFiles/PercolatorAdapter.dir/PercolatorAdapter.cpp.o -o ../../bin/PercolatorAdapter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Built target PercolatorAdapter /usr/bin/make -f src/topp/CMakeFiles/PhosphoScoring.dir/build.make src/topp/CMakeFiles/PhosphoScoring.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/PhosphoScoring.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/PhosphoScoring.dir/build.make src/topp/CMakeFiles/PhosphoScoring.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Linking CXX executable ../../bin/PhosphoScoring cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/PhosphoScoring.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/PhosphoScoring.dir/link.d CMakeFiles/PhosphoScoring.dir/PhosphoScoring.cpp.o -o ../../bin/PhosphoScoring -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Built target PhosphoScoring /usr/bin/make -f src/topp/CMakeFiles/PrecursorIonSelector.dir/build.make src/topp/CMakeFiles/PrecursorIonSelector.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/PrecursorIonSelector.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/PrecursorIonSelector.dir/build.make src/topp/CMakeFiles/PrecursorIonSelector.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Linking CXX executable ../../bin/PrecursorIonSelector cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/PrecursorIonSelector.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/PrecursorIonSelector.dir/link.d CMakeFiles/PrecursorIonSelector.dir/PrecursorIonSelector.cpp.o -o ../../bin/PrecursorIonSelector -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Built target PrecursorIonSelector /usr/bin/make -f src/topp/CMakeFiles/PrecursorMassCorrector.dir/build.make src/topp/CMakeFiles/PrecursorMassCorrector.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/PrecursorMassCorrector.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/PrecursorMassCorrector.dir/build.make src/topp/CMakeFiles/PrecursorMassCorrector.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Linking CXX executable ../../bin/PrecursorMassCorrector cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/PrecursorMassCorrector.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/PrecursorMassCorrector.dir/link.d CMakeFiles/PrecursorMassCorrector.dir/PrecursorMassCorrector.cpp.o -o ../../bin/PrecursorMassCorrector -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Built target PrecursorMassCorrector /usr/bin/make -f src/topp/CMakeFiles/ProteinInference.dir/build.make src/topp/CMakeFiles/ProteinInference.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/ProteinInference.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/ProteinInference.dir/build.make src/topp/CMakeFiles/ProteinInference.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Linking CXX executable ../../bin/ProteinInference cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/ProteinInference.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/ProteinInference.dir/link.d CMakeFiles/ProteinInference.dir/ProteinInference.cpp.o -o ../../bin/ProteinInference -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Built target ProteinInference /usr/bin/make -f src/topp/CMakeFiles/ProteinQuantifier.dir/build.make src/topp/CMakeFiles/ProteinQuantifier.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/ProteinQuantifier.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/ProteinQuantifier.dir/build.make src/topp/CMakeFiles/ProteinQuantifier.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Linking CXX executable ../../bin/ProteinQuantifier cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/ProteinQuantifier.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/ProteinQuantifier.dir/link.d CMakeFiles/ProteinQuantifier.dir/ProteinQuantifier.cpp.o -o ../../bin/ProteinQuantifier -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Built target ProteinQuantifier /usr/bin/make -f src/topp/CMakeFiles/ProteinResolver.dir/build.make src/topp/CMakeFiles/ProteinResolver.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/ProteinResolver.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/ProteinResolver.dir/build.make src/topp/CMakeFiles/ProteinResolver.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 84%] Linking CXX executable ../../bin/ProteinResolver cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/ProteinResolver.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/ProteinResolver.dir/link.d CMakeFiles/ProteinResolver.dir/ProteinResolver.cpp.o -o ../../bin/ProteinResolver -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 84%] Built target ProteinResolver /usr/bin/make -f src/topp/CMakeFiles/PTModel.dir/build.make src/topp/CMakeFiles/PTModel.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/PTModel.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/PTModel.dir/build.make src/topp/CMakeFiles/PTModel.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 85%] Linking CXX executable ../../bin/PTModel cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/PTModel.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/PTModel.dir/link.d CMakeFiles/PTModel.dir/PTModel.cpp.o -o ../../bin/PTModel -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 85%] Built target PTModel /usr/bin/make -f src/topp/CMakeFiles/PTPredict.dir/build.make src/topp/CMakeFiles/PTPredict.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/PTPredict.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/PTPredict.dir/build.make src/topp/CMakeFiles/PTPredict.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 85%] Linking CXX executable ../../bin/PTPredict cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/PTPredict.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/PTPredict.dir/link.d CMakeFiles/PTPredict.dir/PTPredict.cpp.o -o ../../bin/PTPredict -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 85%] Built target PTPredict /usr/bin/make -f src/topp/CMakeFiles/QualityControl.dir/build.make src/topp/CMakeFiles/QualityControl.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/QualityControl.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/QualityControl.dir/build.make src/topp/CMakeFiles/QualityControl.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 85%] Linking CXX executable ../../bin/QualityControl cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/QualityControl.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/QualityControl.dir/link.d CMakeFiles/QualityControl.dir/QualityControl.cpp.o -o ../../bin/QualityControl -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 85%] Built target QualityControl /usr/bin/make -f src/topp/CMakeFiles/RTModel.dir/build.make src/topp/CMakeFiles/RTModel.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/RTModel.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/RTModel.dir/build.make src/topp/CMakeFiles/RTModel.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 85%] Linking CXX executable ../../bin/RTModel cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/RTModel.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/RTModel.dir/link.d CMakeFiles/RTModel.dir/RTModel.cpp.o -o ../../bin/RTModel -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 85%] Built target RTModel /usr/bin/make -f src/topp/CMakeFiles/RTPredict.dir/build.make src/topp/CMakeFiles/RTPredict.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/RTPredict.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/RTPredict.dir/build.make src/topp/CMakeFiles/RTPredict.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 85%] Linking CXX executable ../../bin/RTPredict cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/RTPredict.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/RTPredict.dir/link.d CMakeFiles/RTPredict.dir/RTPredict.cpp.o -o ../../bin/RTPredict -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 85%] Built target RTPredict /usr/bin/make -f src/topp/CMakeFiles/SeedListGenerator.dir/build.make src/topp/CMakeFiles/SeedListGenerator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/SeedListGenerator.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SeedListGenerator.dir/build.make src/topp/CMakeFiles/SeedListGenerator.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 85%] Linking CXX executable ../../bin/SeedListGenerator cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SeedListGenerator.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/SeedListGenerator.dir/link.d CMakeFiles/SeedListGenerator.dir/SeedListGenerator.cpp.o -o ../../bin/SeedListGenerator -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 85%] Built target SeedListGenerator /usr/bin/make -f src/topp/CMakeFiles/SpecLibSearcher.dir/build.make src/topp/CMakeFiles/SpecLibSearcher.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/SpecLibSearcher.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SpecLibSearcher.dir/build.make src/topp/CMakeFiles/SpecLibSearcher.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 85%] Linking CXX executable ../../bin/SpecLibSearcher cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpecLibSearcher.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/SpecLibSearcher.dir/link.d CMakeFiles/SpecLibSearcher.dir/SpecLibSearcher.cpp.o -o ../../bin/SpecLibSearcher -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 85%] Built target SpecLibSearcher /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterBernNorm.dir/build.make src/topp/CMakeFiles/SpectraFilterBernNorm.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/SpectraFilterBernNorm.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterBernNorm.dir/build.make src/topp/CMakeFiles/SpectraFilterBernNorm.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 85%] Linking CXX executable ../../bin/SpectraFilterBernNorm cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpectraFilterBernNorm.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/SpectraFilterBernNorm.dir/link.d CMakeFiles/SpectraFilterBernNorm.dir/SpectraFilterBernNorm.cpp.o -o ../../bin/SpectraFilterBernNorm -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 85%] Built target SpectraFilterBernNorm /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/build.make src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/build.make src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 85%] Linking CXX executable ../../bin/SpectraFilterMarkerMower cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpectraFilterMarkerMower.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/SpectraFilterMarkerMower.dir/link.d CMakeFiles/SpectraFilterMarkerMower.dir/SpectraFilterMarkerMower.cpp.o -o ../../bin/SpectraFilterMarkerMower -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 86%] Built target SpectraFilterMarkerMower /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterNLargest.dir/build.make src/topp/CMakeFiles/SpectraFilterNLargest.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/SpectraFilterNLargest.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterNLargest.dir/build.make src/topp/CMakeFiles/SpectraFilterNLargest.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 86%] Linking CXX executable ../../bin/SpectraFilterNLargest cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpectraFilterNLargest.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/SpectraFilterNLargest.dir/link.d CMakeFiles/SpectraFilterNLargest.dir/SpectraFilterNLargest.cpp.o -o ../../bin/SpectraFilterNLargest -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 86%] Built target SpectraFilterNLargest /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterNormalizer.dir/build.make src/topp/CMakeFiles/SpectraFilterNormalizer.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/SpectraFilterNormalizer.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterNormalizer.dir/build.make src/topp/CMakeFiles/SpectraFilterNormalizer.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 86%] Linking CXX executable ../../bin/SpectraFilterNormalizer cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpectraFilterNormalizer.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/SpectraFilterNormalizer.dir/link.d CMakeFiles/SpectraFilterNormalizer.dir/SpectraFilterNormalizer.cpp.o -o ../../bin/SpectraFilterNormalizer -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 86%] Built target SpectraFilterNormalizer /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/build.make src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/build.make src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 86%] Linking CXX executable ../../bin/SpectraFilterParentPeakMower cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpectraFilterParentPeakMower.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/SpectraFilterParentPeakMower.dir/link.d CMakeFiles/SpectraFilterParentPeakMower.dir/SpectraFilterParentPeakMower.cpp.o -o ../../bin/SpectraFilterParentPeakMower -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 86%] Built target SpectraFilterParentPeakMower /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterScaler.dir/build.make src/topp/CMakeFiles/SpectraFilterScaler.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/SpectraFilterScaler.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterScaler.dir/build.make src/topp/CMakeFiles/SpectraFilterScaler.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 86%] Linking CXX executable ../../bin/SpectraFilterScaler cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpectraFilterScaler.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/SpectraFilterScaler.dir/link.d CMakeFiles/SpectraFilterScaler.dir/SpectraFilterScaler.cpp.o -o ../../bin/SpectraFilterScaler -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 86%] Built target SpectraFilterScaler /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/build.make src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/build.make src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 86%] Linking CXX executable ../../bin/SpectraFilterSqrtMower cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpectraFilterSqrtMower.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/SpectraFilterSqrtMower.dir/link.d CMakeFiles/SpectraFilterSqrtMower.dir/SpectraFilterSqrtMower.cpp.o -o ../../bin/SpectraFilterSqrtMower -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 86%] Built target SpectraFilterSqrtMower /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/build.make src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/build.make src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Linking CXX executable ../../bin/SpectraFilterThresholdMower cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpectraFilterThresholdMower.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/SpectraFilterThresholdMower.dir/link.d CMakeFiles/SpectraFilterThresholdMower.dir/SpectraFilterThresholdMower.cpp.o -o ../../bin/SpectraFilterThresholdMower -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Built target SpectraFilterThresholdMower /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterWindowMower.dir/build.make src/topp/CMakeFiles/SpectraFilterWindowMower.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/SpectraFilterWindowMower.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterWindowMower.dir/build.make src/topp/CMakeFiles/SpectraFilterWindowMower.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Linking CXX executable ../../bin/SpectraFilterWindowMower cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpectraFilterWindowMower.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/SpectraFilterWindowMower.dir/link.d CMakeFiles/SpectraFilterWindowMower.dir/SpectraFilterWindowMower.cpp.o -o ../../bin/SpectraFilterWindowMower -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Built target SpectraFilterWindowMower /usr/bin/make -f src/topp/CMakeFiles/SpectraMerger.dir/build.make src/topp/CMakeFiles/SpectraMerger.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/SpectraMerger.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SpectraMerger.dir/build.make src/topp/CMakeFiles/SpectraMerger.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Linking CXX executable ../../bin/SpectraMerger cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpectraMerger.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/SpectraMerger.dir/link.d CMakeFiles/SpectraMerger.dir/SpectraMerger.cpp.o -o ../../bin/SpectraMerger -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Built target SpectraMerger /usr/bin/make -f src/topp/CMakeFiles/TextExporter.dir/build.make src/topp/CMakeFiles/TextExporter.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/TextExporter.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/TextExporter.dir/build.make src/topp/CMakeFiles/TextExporter.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Linking CXX executable ../../bin/TextExporter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/TextExporter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/TextExporter.dir/link.d CMakeFiles/TextExporter.dir/TextExporter.cpp.o -o ../../bin/TextExporter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Built target TextExporter /usr/bin/make -f src/topp/CMakeFiles/TOFCalibration.dir/build.make src/topp/CMakeFiles/TOFCalibration.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/TOFCalibration.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/TOFCalibration.dir/build.make src/topp/CMakeFiles/TOFCalibration.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Linking CXX executable ../../bin/TOFCalibration cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/TOFCalibration.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/TOFCalibration.dir/link.d CMakeFiles/TOFCalibration.dir/TOFCalibration.cpp.o -o ../../bin/TOFCalibration -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Built target TOFCalibration /usr/bin/make -f src/topp/CMakeFiles/XFDR.dir/build.make src/topp/CMakeFiles/XFDR.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/XFDR.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/XFDR.dir/build.make src/topp/CMakeFiles/XFDR.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 88%] Linking CXX executable ../../bin/XFDR cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/XFDR.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/XFDR.dir/link.d CMakeFiles/XFDR.dir/XFDR.cpp.o -o ../../bin/XFDR -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 88%] Built target XFDR /usr/bin/make -f src/topp/CMakeFiles/XTandemAdapter.dir/build.make src/topp/CMakeFiles/XTandemAdapter.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/XTandemAdapter.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/XTandemAdapter.dir/build.make src/topp/CMakeFiles/XTandemAdapter.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 88%] Linking CXX executable ../../bin/XTandemAdapter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/XTandemAdapter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp -Wl,--dependency-file,CMakeFiles/XTandemAdapter.dir/link.d CMakeFiles/XTandemAdapter.dir/XTandemAdapter.cpp.o -o ../../bin/XTandemAdapter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 88%] Built target XTandemAdapter /usr/bin/make -f src/topp/CMakeFiles/ExecutePipeline.dir/build.make src/topp/CMakeFiles/ExecutePipeline.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/ExecutePipeline.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/ExecutePipeline.dir/build.make src/topp/CMakeFiles/ExecutePipeline.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 88%] Linking CXX executable ../../bin/ExecutePipeline cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/ExecutePipeline.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/ExecutePipeline.dir/link.d CMakeFiles/ExecutePipeline.dir/ExecutePipeline.cpp.o -o ../../bin/ExecutePipeline -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS_GUI.so ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/libQt5Svg.so.5.15.10 /usr/lib64/libQt5WebEngineWidgets.so.5.15.12 /usr/lib64/libQt5WebEngineCore.so.5.15.12 /usr/lib64/libQt5WebChannel.so.5.15.10 /usr/lib64/libQt5Positioning.so.5.15.10 /usr/lib64/libQt5Quick.so.5.15.10 /usr/lib64/libQt5QmlModels.so.5.15.10 /usr/lib64/libQt5Qml.so.5.15.10 /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5PrintSupport.so.5.15.10 /usr/lib64/libQt5Widgets.so.5.15.10 /usr/lib64/libQt5Gui.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 88%] Built target ExecutePipeline /usr/bin/make -f src/topp/CMakeFiles/Resampler.dir/build.make src/topp/CMakeFiles/Resampler.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/Resampler.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/Resampler.dir/build.make src/topp/CMakeFiles/Resampler.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 88%] Linking CXX executable ../../bin/Resampler cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/Resampler.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/Resampler.dir/link.d CMakeFiles/Resampler.dir/Resampler.cpp.o -o ../../bin/Resampler -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS_GUI.so ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/libQt5Svg.so.5.15.10 /usr/lib64/libQt5WebEngineWidgets.so.5.15.12 /usr/lib64/libQt5WebEngineCore.so.5.15.12 /usr/lib64/libQt5WebChannel.so.5.15.10 /usr/lib64/libQt5Positioning.so.5.15.10 /usr/lib64/libQt5Quick.so.5.15.10 /usr/lib64/libQt5QmlModels.so.5.15.10 /usr/lib64/libQt5Qml.so.5.15.10 /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5PrintSupport.so.5.15.10 /usr/lib64/libQt5Widgets.so.5.15.10 /usr/lib64/libQt5Gui.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 88%] Built target Resampler /usr/bin/make -f src/utils/CMakeFiles/AccurateMassSearch.dir/build.make src/utils/CMakeFiles/AccurateMassSearch.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/AccurateMassSearch.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/AccurateMassSearch.dir/build.make src/utils/CMakeFiles/AccurateMassSearch.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 88%] Linking CXX executable ../../bin/AccurateMassSearch cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/AccurateMassSearch.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/AccurateMassSearch.dir/link.d CMakeFiles/AccurateMassSearch.dir/AccurateMassSearch.cpp.o -o ../../bin/AccurateMassSearch -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 88%] Built target AccurateMassSearch /usr/bin/make -f src/utils/CMakeFiles/AssayGeneratorMetabo.dir/build.make src/utils/CMakeFiles/AssayGeneratorMetabo.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/AssayGeneratorMetabo.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/AssayGeneratorMetabo.dir/build.make src/utils/CMakeFiles/AssayGeneratorMetabo.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 88%] Linking CXX executable ../../bin/AssayGeneratorMetabo cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/AssayGeneratorMetabo.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/AssayGeneratorMetabo.dir/link.d CMakeFiles/AssayGeneratorMetabo.dir/AssayGeneratorMetabo.cpp.o -o ../../bin/AssayGeneratorMetabo -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 88%] Built target AssayGeneratorMetabo /usr/bin/make -f src/utils/CMakeFiles/ClusterMassTraces.dir/build.make src/utils/CMakeFiles/ClusterMassTraces.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/ClusterMassTraces.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/ClusterMassTraces.dir/build.make src/utils/CMakeFiles/ClusterMassTraces.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 88%] Linking CXX executable ../../bin/ClusterMassTraces cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/ClusterMassTraces.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/ClusterMassTraces.dir/link.d CMakeFiles/ClusterMassTraces.dir/ClusterMassTraces.cpp.o -o ../../bin/ClusterMassTraces -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 88%] Built target ClusterMassTraces /usr/bin/make -f src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/build.make src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/build.make src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 88%] Linking CXX executable ../../bin/ClusterMassTracesByPrecursor cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/ClusterMassTracesByPrecursor.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/ClusterMassTracesByPrecursor.dir/link.d CMakeFiles/ClusterMassTracesByPrecursor.dir/ClusterMassTracesByPrecursor.cpp.o -o ../../bin/ClusterMassTracesByPrecursor -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 88%] Built target ClusterMassTracesByPrecursor /usr/bin/make -f src/utils/CMakeFiles/CVInspector.dir/build.make src/utils/CMakeFiles/CVInspector.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/CVInspector.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/CVInspector.dir/build.make src/utils/CMakeFiles/CVInspector.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 88%] Linking CXX executable ../../bin/CVInspector cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/CVInspector.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/CVInspector.dir/link.d CMakeFiles/CVInspector.dir/CVInspector.cpp.o -o ../../bin/CVInspector -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 88%] Built target CVInspector /usr/bin/make -f src/utils/CMakeFiles/DatabaseFilter.dir/build.make src/utils/CMakeFiles/DatabaseFilter.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/DatabaseFilter.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/DatabaseFilter.dir/build.make src/utils/CMakeFiles/DatabaseFilter.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 88%] Linking CXX executable ../../bin/DatabaseFilter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/DatabaseFilter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/DatabaseFilter.dir/link.d CMakeFiles/DatabaseFilter.dir/DatabaseFilter.cpp.o -o ../../bin/DatabaseFilter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 88%] Built target DatabaseFilter /usr/bin/make -f src/utils/CMakeFiles/DecoyDatabase.dir/build.make src/utils/CMakeFiles/DecoyDatabase.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/DecoyDatabase.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/DecoyDatabase.dir/build.make src/utils/CMakeFiles/DecoyDatabase.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 88%] Linking CXX executable ../../bin/DecoyDatabase cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/DecoyDatabase.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/DecoyDatabase.dir/link.d CMakeFiles/DecoyDatabase.dir/DecoyDatabase.cpp.o -o ../../bin/DecoyDatabase -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libboost_regex.so /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 88%] Built target DecoyDatabase /usr/bin/make -f src/utils/CMakeFiles/DeMeanderize.dir/build.make src/utils/CMakeFiles/DeMeanderize.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/DeMeanderize.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/DeMeanderize.dir/build.make src/utils/CMakeFiles/DeMeanderize.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 88%] Linking CXX executable ../../bin/DeMeanderize cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/DeMeanderize.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/DeMeanderize.dir/link.d CMakeFiles/DeMeanderize.dir/DeMeanderize.cpp.o -o ../../bin/DeMeanderize -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 88%] Built target DeMeanderize /usr/bin/make -f src/utils/CMakeFiles/Digestor.dir/build.make src/utils/CMakeFiles/Digestor.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/Digestor.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/Digestor.dir/build.make src/utils/CMakeFiles/Digestor.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 88%] Linking CXX executable ../../bin/Digestor cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/Digestor.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/Digestor.dir/link.d CMakeFiles/Digestor.dir/Digestor.cpp.o -o ../../bin/Digestor -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 89%] Built target Digestor /usr/bin/make -f src/utils/CMakeFiles/DigestorMotif.dir/build.make src/utils/CMakeFiles/DigestorMotif.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/DigestorMotif.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/DigestorMotif.dir/build.make src/utils/CMakeFiles/DigestorMotif.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 89%] Linking CXX executable ../../bin/DigestorMotif cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/DigestorMotif.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/DigestorMotif.dir/link.d CMakeFiles/DigestorMotif.dir/DigestorMotif.cpp.o -o ../../bin/DigestorMotif -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 89%] Built target DigestorMotif /usr/bin/make -f src/utils/CMakeFiles/Epifany.dir/build.make src/utils/CMakeFiles/Epifany.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/Epifany.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/Epifany.dir/build.make src/utils/CMakeFiles/Epifany.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 89%] Linking CXX executable ../../bin/Epifany cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/Epifany.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/Epifany.dir/link.d CMakeFiles/Epifany.dir/Epifany.cpp.o -o ../../bin/Epifany -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 89%] Built target Epifany /usr/bin/make -f src/utils/CMakeFiles/ERPairFinder.dir/build.make src/utils/CMakeFiles/ERPairFinder.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/ERPairFinder.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/ERPairFinder.dir/build.make src/utils/CMakeFiles/ERPairFinder.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 89%] Linking CXX executable ../../bin/ERPairFinder cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/ERPairFinder.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/ERPairFinder.dir/link.d CMakeFiles/ERPairFinder.dir/ERPairFinder.cpp.o -o ../../bin/ERPairFinder -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 89%] Built target ERPairFinder /usr/bin/make -f src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/build.make src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/build.make src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 89%] Linking CXX executable ../../bin/FeatureFinderMetaboIdent cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureFinderMetaboIdent.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/FeatureFinderMetaboIdent.dir/link.d CMakeFiles/FeatureFinderMetaboIdent.dir/FeatureFinderMetaboIdent.cpp.o -o ../../bin/FeatureFinderMetaboIdent -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 89%] Built target FeatureFinderMetaboIdent /usr/bin/make -f src/utils/CMakeFiles/FFEval.dir/build.make src/utils/CMakeFiles/FFEval.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/FFEval.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/FFEval.dir/build.make src/utils/CMakeFiles/FFEval.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 89%] Linking CXX executable ../../bin/FFEval cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/FFEval.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/FFEval.dir/link.d CMakeFiles/FFEval.dir/FFEval.cpp.o -o ../../bin/FFEval -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 89%] Built target FFEval /usr/bin/make -f src/utils/CMakeFiles/FuzzyDiff.dir/build.make src/utils/CMakeFiles/FuzzyDiff.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/FuzzyDiff.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/FuzzyDiff.dir/build.make src/utils/CMakeFiles/FuzzyDiff.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 90%] Linking CXX executable ../../bin/FuzzyDiff cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/FuzzyDiff.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/FuzzyDiff.dir/link.d CMakeFiles/FuzzyDiff.dir/FuzzyDiff.cpp.o -o ../../bin/FuzzyDiff -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 90%] Built target FuzzyDiff /usr/bin/make -f src/utils/CMakeFiles/IDDecoyProbability.dir/build.make src/utils/CMakeFiles/IDDecoyProbability.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/IDDecoyProbability.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/IDDecoyProbability.dir/build.make src/utils/CMakeFiles/IDDecoyProbability.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 90%] Linking CXX executable ../../bin/IDDecoyProbability cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDDecoyProbability.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/IDDecoyProbability.dir/link.d CMakeFiles/IDDecoyProbability.dir/IDDecoyProbability.cpp.o -o ../../bin/IDDecoyProbability -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 90%] Built target IDDecoyProbability /usr/bin/make -f src/utils/CMakeFiles/IDExtractor.dir/build.make src/utils/CMakeFiles/IDExtractor.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/IDExtractor.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/IDExtractor.dir/build.make src/utils/CMakeFiles/IDExtractor.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Linking CXX executable ../../bin/IDExtractor cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDExtractor.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/IDExtractor.dir/link.d CMakeFiles/IDExtractor.dir/IDExtractor.cpp.o -o ../../bin/IDExtractor -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Built target IDExtractor /usr/bin/make -f src/utils/CMakeFiles/IDMassAccuracy.dir/build.make src/utils/CMakeFiles/IDMassAccuracy.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/IDMassAccuracy.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/IDMassAccuracy.dir/build.make src/utils/CMakeFiles/IDMassAccuracy.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Linking CXX executable ../../bin/IDMassAccuracy cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDMassAccuracy.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/IDMassAccuracy.dir/link.d CMakeFiles/IDMassAccuracy.dir/IDMassAccuracy.cpp.o -o ../../bin/IDMassAccuracy -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Built target IDMassAccuracy /usr/bin/make -f src/utils/CMakeFiles/IDScoreSwitcher.dir/build.make src/utils/CMakeFiles/IDScoreSwitcher.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/IDScoreSwitcher.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/IDScoreSwitcher.dir/build.make src/utils/CMakeFiles/IDScoreSwitcher.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Linking CXX executable ../../bin/IDScoreSwitcher cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDScoreSwitcher.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/IDScoreSwitcher.dir/link.d CMakeFiles/IDScoreSwitcher.dir/IDScoreSwitcher.cpp.o -o ../../bin/IDScoreSwitcher -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Built target IDScoreSwitcher /usr/bin/make -f src/utils/CMakeFiles/IDSplitter.dir/build.make src/utils/CMakeFiles/IDSplitter.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/IDSplitter.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/IDSplitter.dir/build.make src/utils/CMakeFiles/IDSplitter.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Linking CXX executable ../../bin/IDSplitter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDSplitter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/IDSplitter.dir/link.d CMakeFiles/IDSplitter.dir/IDSplitter.cpp.o -o ../../bin/IDSplitter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Built target IDSplitter /usr/bin/make -f src/utils/CMakeFiles/LabeledEval.dir/build.make src/utils/CMakeFiles/LabeledEval.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/LabeledEval.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/LabeledEval.dir/build.make src/utils/CMakeFiles/LabeledEval.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Linking CXX executable ../../bin/LabeledEval cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/LabeledEval.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/LabeledEval.dir/link.d CMakeFiles/LabeledEval.dir/LabeledEval.cpp.o -o ../../bin/LabeledEval -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Built target LabeledEval /usr/bin/make -f src/utils/CMakeFiles/MassCalculator.dir/build.make src/utils/CMakeFiles/MassCalculator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/MassCalculator.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/MassCalculator.dir/build.make src/utils/CMakeFiles/MassCalculator.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Linking CXX executable ../../bin/MassCalculator cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/MassCalculator.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/MassCalculator.dir/link.d CMakeFiles/MassCalculator.dir/MassCalculator.cpp.o -o ../../bin/MassCalculator -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Built target MassCalculator /usr/bin/make -f src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/build.make src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/build.make src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Linking CXX executable ../../bin/MetaboliteAdductDecharger cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/MetaboliteAdductDecharger.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/MetaboliteAdductDecharger.dir/link.d CMakeFiles/MetaboliteAdductDecharger.dir/MetaboliteAdductDecharger.cpp.o -o ../../bin/MetaboliteAdductDecharger -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Built target MetaboliteAdductDecharger /usr/bin/make -f src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/build.make src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/build.make src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Linking CXX executable ../../bin/MetaboliteSpectralMatcher cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/MetaboliteSpectralMatcher.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/MetaboliteSpectralMatcher.dir/link.d CMakeFiles/MetaboliteSpectralMatcher.dir/MetaboliteSpectralMatcher.cpp.o -o ../../bin/MetaboliteSpectralMatcher -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Built target MetaboliteSpectralMatcher /usr/bin/make -f src/utils/CMakeFiles/MetaProSIP.dir/build.make src/utils/CMakeFiles/MetaProSIP.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/MetaProSIP.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/MetaProSIP.dir/build.make src/utils/CMakeFiles/MetaProSIP.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Linking CXX executable ../../bin/MetaProSIP cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/MetaProSIP.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/MetaProSIP.dir/link.d CMakeFiles/MetaProSIP.dir/MetaProSIP.cpp.o -o ../../bin/MetaProSIP -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 92%] Built target MetaProSIP /usr/bin/make -f src/utils/CMakeFiles/MRMPairFinder.dir/build.make src/utils/CMakeFiles/MRMPairFinder.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/MRMPairFinder.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/MRMPairFinder.dir/build.make src/utils/CMakeFiles/MRMPairFinder.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 92%] Linking CXX executable ../../bin/MRMPairFinder cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/MRMPairFinder.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/MRMPairFinder.dir/link.d CMakeFiles/MRMPairFinder.dir/MRMPairFinder.cpp.o -o ../../bin/MRMPairFinder -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 92%] Built target MRMPairFinder /usr/bin/make -f src/utils/CMakeFiles/MSFraggerAdapter.dir/build.make src/utils/CMakeFiles/MSFraggerAdapter.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/MSFraggerAdapter.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/MSFraggerAdapter.dir/build.make src/utils/CMakeFiles/MSFraggerAdapter.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 92%] Linking CXX executable ../../bin/MSFraggerAdapter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/MSFraggerAdapter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/MSFraggerAdapter.dir/link.d CMakeFiles/MSFraggerAdapter.dir/MSFraggerAdapter.cpp.o -o ../../bin/MSFraggerAdapter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 92%] Built target MSFraggerAdapter /usr/bin/make -f src/utils/CMakeFiles/MSSimulator.dir/build.make src/utils/CMakeFiles/MSSimulator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/MSSimulator.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/MSSimulator.dir/build.make src/utils/CMakeFiles/MSSimulator.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 92%] Linking CXX executable ../../bin/MSSimulator cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/MSSimulator.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/MSSimulator.dir/link.d CMakeFiles/MSSimulator.dir/MSSimulator.cpp.o -o ../../bin/MSSimulator -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 92%] Built target MSSimulator /usr/bin/make -f src/utils/CMakeFiles/MSstatsConverter.dir/build.make src/utils/CMakeFiles/MSstatsConverter.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/MSstatsConverter.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/MSstatsConverter.dir/build.make src/utils/CMakeFiles/MSstatsConverter.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 92%] Linking CXX executable ../../bin/MSstatsConverter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/MSstatsConverter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/MSstatsConverter.dir/link.d CMakeFiles/MSstatsConverter.dir/MSstatsConverter.cpp.o -o ../../bin/MSstatsConverter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 93%] Built target MSstatsConverter /usr/bin/make -f src/utils/CMakeFiles/MultiplexResolver.dir/build.make src/utils/CMakeFiles/MultiplexResolver.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/MultiplexResolver.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/MultiplexResolver.dir/build.make src/utils/CMakeFiles/MultiplexResolver.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 93%] Linking CXX executable ../../bin/MultiplexResolver cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/MultiplexResolver.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/MultiplexResolver.dir/link.d CMakeFiles/MultiplexResolver.dir/MultiplexResolver.cpp.o -o ../../bin/MultiplexResolver -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 93%] Built target MultiplexResolver /usr/bin/make -f src/utils/CMakeFiles/MzMLSplitter.dir/build.make src/utils/CMakeFiles/MzMLSplitter.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/MzMLSplitter.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/MzMLSplitter.dir/build.make src/utils/CMakeFiles/MzMLSplitter.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 93%] Linking CXX executable ../../bin/MzMLSplitter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/MzMLSplitter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/MzMLSplitter.dir/link.d CMakeFiles/MzMLSplitter.dir/MzMLSplitter.cpp.o -o ../../bin/MzMLSplitter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 93%] Built target MzMLSplitter /usr/bin/make -f src/utils/CMakeFiles/NovorAdapter.dir/build.make src/utils/CMakeFiles/NovorAdapter.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/NovorAdapter.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/NovorAdapter.dir/build.make src/utils/CMakeFiles/NovorAdapter.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 93%] Linking CXX executable ../../bin/NovorAdapter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/NovorAdapter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/NovorAdapter.dir/link.d CMakeFiles/NovorAdapter.dir/NovorAdapter.cpp.o -o ../../bin/NovorAdapter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 93%] Built target NovorAdapter /usr/bin/make -f src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/build.make src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/build.make src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 93%] Linking CXX executable ../../bin/NucleicAcidSearchEngine cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/NucleicAcidSearchEngine.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/NucleicAcidSearchEngine.dir/link.d CMakeFiles/NucleicAcidSearchEngine.dir/NucleicAcidSearchEngine.cpp.o -o ../../bin/NucleicAcidSearchEngine -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libboost_regex.so /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 93%] Built target NucleicAcidSearchEngine /usr/bin/make -f src/utils/CMakeFiles/OpenMSDatabasesInfo.dir/build.make src/utils/CMakeFiles/OpenMSDatabasesInfo.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/OpenMSDatabasesInfo.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/OpenMSDatabasesInfo.dir/build.make src/utils/CMakeFiles/OpenMSDatabasesInfo.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Linking CXX executable ../../bin/OpenMSDatabasesInfo cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenMSDatabasesInfo.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/OpenMSDatabasesInfo.dir/link.d CMakeFiles/OpenMSDatabasesInfo.dir/OpenMSDatabasesInfo.cpp.o -o ../../bin/OpenMSDatabasesInfo -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Built target OpenMSDatabasesInfo /usr/bin/make -f src/utils/CMakeFiles/OpenMSInfo.dir/build.make src/utils/CMakeFiles/OpenMSInfo.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/OpenMSInfo.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/OpenMSInfo.dir/build.make src/utils/CMakeFiles/OpenMSInfo.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Linking CXX executable ../../bin/OpenMSInfo cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenMSInfo.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/OpenMSInfo.dir/link.d CMakeFiles/OpenMSInfo.dir/OpenMSInfo.cpp.o -o ../../bin/OpenMSInfo -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Built target OpenMSInfo /usr/bin/make -f src/utils/CMakeFiles/PeakPickerIterative.dir/build.make src/utils/CMakeFiles/PeakPickerIterative.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/PeakPickerIterative.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/PeakPickerIterative.dir/build.make src/utils/CMakeFiles/PeakPickerIterative.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Linking CXX executable ../../bin/PeakPickerIterative cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/PeakPickerIterative.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/PeakPickerIterative.dir/link.d CMakeFiles/PeakPickerIterative.dir/PeakPickerIterative.cpp.o -o ../../bin/PeakPickerIterative -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Built target PeakPickerIterative /usr/bin/make -f src/utils/CMakeFiles/PSMFeatureExtractor.dir/build.make src/utils/CMakeFiles/PSMFeatureExtractor.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/PSMFeatureExtractor.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/PSMFeatureExtractor.dir/build.make src/utils/CMakeFiles/PSMFeatureExtractor.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Linking CXX executable ../../bin/PSMFeatureExtractor cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/PSMFeatureExtractor.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/PSMFeatureExtractor.dir/link.d CMakeFiles/PSMFeatureExtractor.dir/PSMFeatureExtractor.cpp.o -o ../../bin/PSMFeatureExtractor -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Built target PSMFeatureExtractor /usr/bin/make -f src/utils/CMakeFiles/QCCalculator.dir/build.make src/utils/CMakeFiles/QCCalculator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/QCCalculator.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/QCCalculator.dir/build.make src/utils/CMakeFiles/QCCalculator.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Linking CXX executable ../../bin/QCCalculator cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/QCCalculator.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/QCCalculator.dir/link.d CMakeFiles/QCCalculator.dir/QCCalculator.cpp.o -o ../../bin/QCCalculator -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Built target QCCalculator /usr/bin/make -f src/utils/CMakeFiles/QCEmbedder.dir/build.make src/utils/CMakeFiles/QCEmbedder.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/QCEmbedder.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/QCEmbedder.dir/build.make src/utils/CMakeFiles/QCEmbedder.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Linking CXX executable ../../bin/QCEmbedder cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/QCEmbedder.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/QCEmbedder.dir/link.d CMakeFiles/QCEmbedder.dir/QCEmbedder.cpp.o -o ../../bin/QCEmbedder -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Built target QCEmbedder /usr/bin/make -f src/utils/CMakeFiles/QCExporter.dir/build.make src/utils/CMakeFiles/QCExporter.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/QCExporter.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/QCExporter.dir/build.make src/utils/CMakeFiles/QCExporter.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Linking CXX executable ../../bin/QCExporter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/QCExporter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/QCExporter.dir/link.d CMakeFiles/QCExporter.dir/QCExporter.cpp.o -o ../../bin/QCExporter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Built target QCExporter /usr/bin/make -f src/utils/CMakeFiles/QCExtractor.dir/build.make src/utils/CMakeFiles/QCExtractor.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/QCExtractor.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/QCExtractor.dir/build.make src/utils/CMakeFiles/QCExtractor.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Linking CXX executable ../../bin/QCExtractor cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/QCExtractor.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/QCExtractor.dir/link.d CMakeFiles/QCExtractor.dir/QCExtractor.cpp.o -o ../../bin/QCExtractor -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Built target QCExtractor /usr/bin/make -f src/utils/CMakeFiles/QCImporter.dir/build.make src/utils/CMakeFiles/QCImporter.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/QCImporter.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/QCImporter.dir/build.make src/utils/CMakeFiles/QCImporter.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Linking CXX executable ../../bin/QCImporter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/QCImporter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/QCImporter.dir/link.d CMakeFiles/QCImporter.dir/QCImporter.cpp.o -o ../../bin/QCImporter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Built target QCImporter /usr/bin/make -f src/utils/CMakeFiles/QCMerger.dir/build.make src/utils/CMakeFiles/QCMerger.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/QCMerger.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/QCMerger.dir/build.make src/utils/CMakeFiles/QCMerger.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Linking CXX executable ../../bin/QCMerger cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/QCMerger.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/QCMerger.dir/link.d CMakeFiles/QCMerger.dir/QCMerger.cpp.o -o ../../bin/QCMerger -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 95%] Built target QCMerger /usr/bin/make -f src/utils/CMakeFiles/QCShrinker.dir/build.make src/utils/CMakeFiles/QCShrinker.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/QCShrinker.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/QCShrinker.dir/build.make src/utils/CMakeFiles/QCShrinker.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 95%] Linking CXX executable ../../bin/QCShrinker cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/QCShrinker.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/QCShrinker.dir/link.d CMakeFiles/QCShrinker.dir/QCShrinker.cpp.o -o ../../bin/QCShrinker -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 95%] Built target QCShrinker /usr/bin/make -f src/utils/CMakeFiles/ProteomicsLFQ.dir/build.make src/utils/CMakeFiles/ProteomicsLFQ.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/ProteomicsLFQ.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/ProteomicsLFQ.dir/build.make src/utils/CMakeFiles/ProteomicsLFQ.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 95%] Linking CXX executable ../../bin/ProteomicsLFQ cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/ProteomicsLFQ.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/ProteomicsLFQ.dir/link.d CMakeFiles/ProteomicsLFQ.dir/ProteomicsLFQ.cpp.o -o ../../bin/ProteomicsLFQ -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 95%] Built target ProteomicsLFQ /usr/bin/make -f src/utils/CMakeFiles/RNADigestor.dir/build.make src/utils/CMakeFiles/RNADigestor.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/RNADigestor.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/RNADigestor.dir/build.make src/utils/CMakeFiles/RNADigestor.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 95%] Linking CXX executable ../../bin/RNADigestor cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/RNADigestor.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/RNADigestor.dir/link.d CMakeFiles/RNADigestor.dir/RNADigestor.cpp.o -o ../../bin/RNADigestor -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 95%] Built target RNADigestor /usr/bin/make -f src/utils/CMakeFiles/RNAMassCalculator.dir/build.make src/utils/CMakeFiles/RNAMassCalculator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/RNAMassCalculator.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/RNAMassCalculator.dir/build.make src/utils/CMakeFiles/RNAMassCalculator.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 95%] Linking CXX executable ../../bin/RNAMassCalculator cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/RNAMassCalculator.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/RNAMassCalculator.dir/link.d CMakeFiles/RNAMassCalculator.dir/RNAMassCalculator.cpp.o -o ../../bin/RNAMassCalculator -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 95%] Built target RNAMassCalculator /usr/bin/make -f src/utils/CMakeFiles/RNPxlXICFilter.dir/build.make src/utils/CMakeFiles/RNPxlXICFilter.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/RNPxlXICFilter.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/RNPxlXICFilter.dir/build.make src/utils/CMakeFiles/RNPxlXICFilter.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 95%] Linking CXX executable ../../bin/RNPxlXICFilter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/RNPxlXICFilter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/RNPxlXICFilter.dir/link.d CMakeFiles/RNPxlXICFilter.dir/RNPxlXICFilter.cpp.o -o ../../bin/RNPxlXICFilter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 96%] Built target RNPxlXICFilter /usr/bin/make -f src/utils/CMakeFiles/RNPxlSearch.dir/build.make src/utils/CMakeFiles/RNPxlSearch.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/RNPxlSearch.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/RNPxlSearch.dir/build.make src/utils/CMakeFiles/RNPxlSearch.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 96%] Linking CXX executable ../../bin/RNPxlSearch cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/RNPxlSearch.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/RNPxlSearch.dir/link.d CMakeFiles/RNPxlSearch.dir/RNPxlSearch.cpp.o -o ../../bin/RNPxlSearch -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 96%] Built target RNPxlSearch /usr/bin/make -f src/utils/CMakeFiles/RTEvaluation.dir/build.make src/utils/CMakeFiles/RTEvaluation.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/RTEvaluation.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/RTEvaluation.dir/build.make src/utils/CMakeFiles/RTEvaluation.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 96%] Linking CXX executable ../../bin/RTEvaluation cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/RTEvaluation.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/RTEvaluation.dir/link.d CMakeFiles/RTEvaluation.dir/RTEvaluation.cpp.o -o ../../bin/RTEvaluation -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 96%] Built target RTEvaluation /usr/bin/make -f src/utils/CMakeFiles/SemanticValidator.dir/build.make src/utils/CMakeFiles/SemanticValidator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/SemanticValidator.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/SemanticValidator.dir/build.make src/utils/CMakeFiles/SemanticValidator.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Linking CXX executable ../../bin/SemanticValidator cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/SemanticValidator.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/SemanticValidator.dir/link.d CMakeFiles/SemanticValidator.dir/SemanticValidator.cpp.o -o ../../bin/SemanticValidator -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Built target SemanticValidator /usr/bin/make -f src/utils/CMakeFiles/SequenceCoverageCalculator.dir/build.make src/utils/CMakeFiles/SequenceCoverageCalculator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/SequenceCoverageCalculator.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/SequenceCoverageCalculator.dir/build.make src/utils/CMakeFiles/SequenceCoverageCalculator.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Linking CXX executable ../../bin/SequenceCoverageCalculator cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/SequenceCoverageCalculator.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/SequenceCoverageCalculator.dir/link.d CMakeFiles/SequenceCoverageCalculator.dir/SequenceCoverageCalculator.cpp.o -o ../../bin/SequenceCoverageCalculator -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Built target SequenceCoverageCalculator /usr/bin/make -f src/utils/CMakeFiles/SimpleSearchEngine.dir/build.make src/utils/CMakeFiles/SimpleSearchEngine.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/SimpleSearchEngine.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/SimpleSearchEngine.dir/build.make src/utils/CMakeFiles/SimpleSearchEngine.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Linking CXX executable ../../bin/SimpleSearchEngine cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/SimpleSearchEngine.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/SimpleSearchEngine.dir/link.d CMakeFiles/SimpleSearchEngine.dir/SimpleSearchEngine.cpp.o -o ../../bin/SimpleSearchEngine -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Built target SimpleSearchEngine /usr/bin/make -f src/utils/CMakeFiles/SiriusAdapter.dir/build.make src/utils/CMakeFiles/SiriusAdapter.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/SiriusAdapter.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/SiriusAdapter.dir/build.make src/utils/CMakeFiles/SiriusAdapter.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Linking CXX executable ../../bin/SiriusAdapter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/SiriusAdapter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/SiriusAdapter.dir/link.d CMakeFiles/SiriusAdapter.dir/SiriusAdapter.cpp.o -o ../../bin/SiriusAdapter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Built target SiriusAdapter /usr/bin/make -f src/utils/CMakeFiles/SpecLibCreator.dir/build.make src/utils/CMakeFiles/SpecLibCreator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/SpecLibCreator.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/SpecLibCreator.dir/build.make src/utils/CMakeFiles/SpecLibCreator.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Linking CXX executable ../../bin/SpecLibCreator cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpecLibCreator.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/SpecLibCreator.dir/link.d CMakeFiles/SpecLibCreator.dir/SpecLibCreator.cpp.o -o ../../bin/SpecLibCreator -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Built target SpecLibCreator /usr/bin/make -f src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/build.make src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/build.make src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Linking CXX executable ../../bin/SpectraSTSearchAdapter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpectraSTSearchAdapter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/SpectraSTSearchAdapter.dir/link.d CMakeFiles/SpectraSTSearchAdapter.dir/SpectraSTSearchAdapter.cpp.o -o ../../bin/SpectraSTSearchAdapter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Built target SpectraSTSearchAdapter /usr/bin/make -f src/utils/CMakeFiles/StaticModification.dir/build.make src/utils/CMakeFiles/StaticModification.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/StaticModification.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/StaticModification.dir/build.make src/utils/CMakeFiles/StaticModification.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Linking CXX executable ../../bin/StaticModification cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/StaticModification.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/StaticModification.dir/link.d CMakeFiles/StaticModification.dir/StaticModification.cpp.o -o ../../bin/StaticModification -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Built target StaticModification /usr/bin/make -f src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/build.make src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/build.make src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Linking CXX executable ../../bin/SvmTheoreticalSpectrumGeneratorTrainer cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/link.d CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/SvmTheoreticalSpectrumGeneratorTrainer.cpp.o -o ../../bin/SvmTheoreticalSpectrumGeneratorTrainer -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Built target SvmTheoreticalSpectrumGeneratorTrainer /usr/bin/make -f src/utils/CMakeFiles/TICCalculator.dir/build.make src/utils/CMakeFiles/TICCalculator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/TICCalculator.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/TICCalculator.dir/build.make src/utils/CMakeFiles/TICCalculator.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Linking CXX executable ../../bin/TICCalculator cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/TICCalculator.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/TICCalculator.dir/link.d CMakeFiles/TICCalculator.dir/TICCalculator.cpp.o -o ../../bin/TICCalculator -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Built target TICCalculator /usr/bin/make -f src/utils/CMakeFiles/TransformationEvaluation.dir/build.make src/utils/CMakeFiles/TransformationEvaluation.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/TransformationEvaluation.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/TransformationEvaluation.dir/build.make src/utils/CMakeFiles/TransformationEvaluation.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Linking CXX executable ../../bin/TransformationEvaluation cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/TransformationEvaluation.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/TransformationEvaluation.dir/link.d CMakeFiles/TransformationEvaluation.dir/TransformationEvaluation.cpp.o -o ../../bin/TransformationEvaluation -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Built target TransformationEvaluation /usr/bin/make -f src/utils/CMakeFiles/TriqlerConverter.dir/build.make src/utils/CMakeFiles/TriqlerConverter.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/TriqlerConverter.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/TriqlerConverter.dir/build.make src/utils/CMakeFiles/TriqlerConverter.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Linking CXX executable ../../bin/TriqlerConverter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/TriqlerConverter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/TriqlerConverter.dir/link.d CMakeFiles/TriqlerConverter.dir/TriqlerConverter.cpp.o -o ../../bin/TriqlerConverter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Built target TriqlerConverter /usr/bin/make -f src/utils/CMakeFiles/XMLValidator.dir/build.make src/utils/CMakeFiles/XMLValidator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/XMLValidator.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/XMLValidator.dir/build.make src/utils/CMakeFiles/XMLValidator.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Linking CXX executable ../../bin/XMLValidator cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/XMLValidator.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/XMLValidator.dir/link.d CMakeFiles/XMLValidator.dir/XMLValidator.cpp.o -o ../../bin/XMLValidator -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Built target XMLValidator /usr/bin/make -f src/utils/CMakeFiles/TargetedFileConverter.dir/build.make src/utils/CMakeFiles/TargetedFileConverter.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/TargetedFileConverter.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/TargetedFileConverter.dir/build.make src/utils/CMakeFiles/TargetedFileConverter.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Linking CXX executable ../../bin/TargetedFileConverter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/TargetedFileConverter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/TargetedFileConverter.dir/link.d CMakeFiles/TargetedFileConverter.dir/TargetedFileConverter.cpp.o -o ../../bin/TargetedFileConverter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Built target TargetedFileConverter /usr/bin/make -f src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/build.make src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/build.make src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Linking CXX executable ../../bin/OpenSwathDIAPreScoring cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathDIAPreScoring.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/OpenSwathDIAPreScoring.dir/link.d CMakeFiles/OpenSwathDIAPreScoring.dir/OpenSwathDIAPreScoring.cpp.o -o ../../bin/OpenSwathDIAPreScoring -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Built target OpenSwathDIAPreScoring /usr/bin/make -f src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/build.make src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/build.make src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Linking CXX executable ../../bin/OpenSwathMzMLFileCacher cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathMzMLFileCacher.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/OpenSwathMzMLFileCacher.dir/link.d CMakeFiles/OpenSwathMzMLFileCacher.dir/OpenSwathMzMLFileCacher.cpp.o -o ../../bin/OpenSwathMzMLFileCacher -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Built target OpenSwathMzMLFileCacher /usr/bin/make -f src/utils/CMakeFiles/OpenSwathWorkflow.dir/build.make src/utils/CMakeFiles/OpenSwathWorkflow.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/OpenSwathWorkflow.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/OpenSwathWorkflow.dir/build.make src/utils/CMakeFiles/OpenSwathWorkflow.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Linking CXX executable ../../bin/OpenSwathWorkflow cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathWorkflow.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/OpenSwathWorkflow.dir/link.d CMakeFiles/OpenSwathWorkflow.dir/OpenSwathWorkflow.cpp.o -o ../../bin/OpenSwathWorkflow -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Built target OpenSwathWorkflow /usr/bin/make -f src/utils/CMakeFiles/OpenSwathFileSplitter.dir/build.make src/utils/CMakeFiles/OpenSwathFileSplitter.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/OpenSwathFileSplitter.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/OpenSwathFileSplitter.dir/build.make src/utils/CMakeFiles/OpenSwathFileSplitter.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Linking CXX executable ../../bin/OpenSwathFileSplitter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathFileSplitter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/OpenSwathFileSplitter.dir/link.d CMakeFiles/OpenSwathFileSplitter.dir/OpenSwathFileSplitter.cpp.o -o ../../bin/OpenSwathFileSplitter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Built target OpenSwathFileSplitter /usr/bin/make -f src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/build.make src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/build.make src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Linking CXX executable ../../bin/OpenSwathRewriteToFeatureXML cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathRewriteToFeatureXML.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/OpenSwathRewriteToFeatureXML.dir/link.d CMakeFiles/OpenSwathRewriteToFeatureXML.dir/OpenSwathRewriteToFeatureXML.cpp.o -o ../../bin/OpenSwathRewriteToFeatureXML -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Built target OpenSwathRewriteToFeatureXML /usr/bin/make -f src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/build.make src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/build.make src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Linking CXX executable ../../bin/MRMTransitionGroupPicker cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/MRMTransitionGroupPicker.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/MRMTransitionGroupPicker.dir/link.d CMakeFiles/MRMTransitionGroupPicker.dir/MRMTransitionGroupPicker.cpp.o -o ../../bin/MRMTransitionGroupPicker -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Built target MRMTransitionGroupPicker /usr/bin/make -f src/utils/CMakeFiles/ImageCreator.dir/build.make src/utils/CMakeFiles/ImageCreator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/ImageCreator.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/ImageCreator.dir/build.make src/utils/CMakeFiles/ImageCreator.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Linking CXX executable ../../bin/ImageCreator cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/ImageCreator.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/ImageCreator.dir/link.d CMakeFiles/ImageCreator.dir/ImageCreator.cpp.o -o ../../bin/ImageCreator -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS_GUI.so ../../lib/libOpenMS.so /usr/lib64/libQt5Svg.so.5.15.10 /usr/lib64/libQt5WebEngineWidgets.so.5.15.12 ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/libQt5WebEngineCore.so.5.15.12 /usr/lib64/libQt5WebChannel.so.5.15.10 /usr/lib64/libQt5Positioning.so.5.15.10 /usr/lib64/libQt5Quick.so.5.15.10 /usr/lib64/libQt5QmlModels.so.5.15.10 /usr/lib64/libQt5Qml.so.5.15.10 /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5PrintSupport.so.5.15.10 /usr/lib64/libQt5Widgets.so.5.15.10 /usr/lib64/libQt5Gui.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Built target ImageCreator /usr/bin/make -f src/utils/CMakeFiles/INIUpdater.dir/build.make src/utils/CMakeFiles/INIUpdater.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/INIUpdater.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/INIUpdater.dir/build.make src/utils/CMakeFiles/INIUpdater.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Linking CXX executable ../../bin/INIUpdater cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/INIUpdater.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file,CMakeFiles/INIUpdater.dir/link.d CMakeFiles/INIUpdater.dir/INIUpdater.cpp.o -o ../../bin/INIUpdater -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS_GUI.so ../../lib/libOpenMS.so /usr/lib64/libQt5Svg.so.5.15.10 /usr/lib64/libQt5WebEngineWidgets.so.5.15.12 ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Sql.so.5.15.10 /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/libQt5WebEngineCore.so.5.15.12 /usr/lib64/libQt5WebChannel.so.5.15.10 /usr/lib64/libQt5Positioning.so.5.15.10 /usr/lib64/libQt5Quick.so.5.15.10 /usr/lib64/libQt5QmlModels.so.5.15.10 /usr/lib64/libQt5Qml.so.5.15.10 /usr/lib64/libQt5Network.so.5.15.10 /usr/lib64/libQt5PrintSupport.so.5.15.10 /usr/lib64/libQt5Widgets.so.5.15.10 /usr/lib64/libQt5Gui.so.5.15.10 /usr/lib64/libQt5Core.so.5.15.10 make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Built target INIUpdater /usr/bin/make -f src/utils/CMakeFiles/UTILS.dir/build.make src/utils/CMakeFiles/UTILS.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/UTILS.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/UTILS.dir/build.make src/utils/CMakeFiles/UTILS.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/UTILS.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Built target UTILS /usr/bin/make -f src/topp/CMakeFiles/TOPP.dir/build.make src/topp/CMakeFiles/TOPP.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/TOPP.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/TOPP.dir/build.make src/topp/CMakeFiles/TOPP.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/TOPP.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Built target TOPP /usr/bin/make -f doc/CMakeFiles/doc_minimal.dir/build.make doc/CMakeFiles/doc_minimal.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/doc /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/doc /builddir/build/BUILD/OpenMS-2.8.0/build/doc/CMakeFiles/doc_minimal.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f doc/CMakeFiles/doc_minimal.dir/build.make doc/CMakeFiles/doc_minimal.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Build the doxygen documentation cd /builddir/build/BUILD/OpenMS-2.8.0/build/doc && /usr/bin/cmake -E echo "" cd /builddir/build/BUILD/OpenMS-2.8.0/build/doc && /usr/bin/cmake -E echo "~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~" ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ cd /builddir/build/BUILD/OpenMS-2.8.0/build/doc && /usr/bin/cmake -E echo "Creating html documentation without class/TOPP/UTILS documentation" Creating html documentation without class/TOPP/UTILS documentation cd /builddir/build/BUILD/OpenMS-2.8.0/build/doc && /usr/bin/cmake -E echo "" cd /builddir/build/BUILD/OpenMS-2.8.0/build/doc && /usr/bin/cmake -E remove_directory html cd /builddir/build/BUILD/OpenMS-2.8.0/build/doc && /usr/bin/cmake -E chdir /builddir/build/BUILD/OpenMS-2.8.0/build/doc /usr/bin/doxygen doxygen/Doxyfile_noclass warning: Tag 'OUTPUT_TEXT_DIRECTION' at line 115 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'COLS_IN_ALPHA_INDEX' at line 1141 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'HTML_TIMESTAMP' at line 1277 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'FORMULA_TRANSPARENT' at line 1569 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'LATEX_SOURCE_CODE' at line 1871 of file 'doxygen/Doxyfile' has become obsolete. 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To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOT_FONTNAME' at line 2296 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOT_FONTSIZE' at line 2303 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOT_TRANSPARENT' at line 2527 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" Doxygen version used: 1.9.7 Searching for include files... Searching for example files... 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/builddir/build/BUILD/OpenMS-2.8.0/doc/OpenMS_tutorial/OpenMS_Tutorial.doxygen... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/doc/OpenMS_tutorial/OpenMS_Tutorial.doxygen... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/doc/TOPP_tutorial/TOPP_advanced.doxygen... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/doc/TOPP_tutorial/TOPP_advanced.doxygen... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/doc/TOPP_tutorial/TOPP_concepts.doxygen... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/doc/TOPP_tutorial/TOPP_concepts.doxygen... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/doc/TOPP_tutorial/TOPP_scripting.doxygen... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/doc/TOPP_tutorial/TOPP_scripting.doxygen... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/doc/TOPP_tutorial/TOPPAS.doxygen... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/doc/TOPP_tutorial/TOPPAS.doxygen... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/doc/TOPP_tutorial/TOPPView_calling_topp.doxygen... 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Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/INIFileEditorWindow.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/INIFileEditorWindow.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/SwathWizardBase.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/SwathWizardBase.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/BaselineFilter.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/BaselineFilter.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/CometAdapter.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/CometAdapter.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/CompNovo.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/CompNovo.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/CompNovoCID.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/CompNovoCID.cpp... 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Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureLinkerLabeled.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureLinkerLabeled.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureLinkerUnlabeled.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureLinkerUnlabeled.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureLinkerUnlabeledKD.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureLinkerUnlabeledKD.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureLinkerUnlabeledQT.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureLinkerUnlabeledQT.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FidoAdapter.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FidoAdapter.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FileConverter.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FileConverter.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FileFilter.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FileFilter.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FileInfo.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FileInfo.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FileMerger.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FileMerger.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/GenericWrapper.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/GenericWrapper.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/GNPSExport.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/GNPSExport.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/HighResPrecursorMassCorrector.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/HighResPrecursorMassCorrector.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDConflictResolver.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDConflictResolver.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDFileConverter.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDFileConverter.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDFilter.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDFilter.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDMapper.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDMapper.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDMerger.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDMerger.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDPosteriorErrorProbability.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDPosteriorErrorProbability.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDRipper.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDRipper.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDRTCalibration.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDRTCalibration.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/InclusionExclusionListCreator.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/InclusionExclusionListCreator.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/InternalCalibration.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/InternalCalibration.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IsobaricAnalyzer.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IsobaricAnalyzer.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/LuciphorAdapter.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/LuciphorAdapter.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MapAlignerIdentification.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MapAlignerIdentification.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MapAlignerPoseClustering.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MapAlignerPoseClustering.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MapAlignerSpectrum.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MapAlignerSpectrum.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MapAlignerTreeGuided.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MapAlignerTreeGuided.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MapNormalizer.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MapNormalizer.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MapRTTransformer.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MapRTTransformer.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MapStatistics.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MapStatistics.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MaRaClusterAdapter.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MaRaClusterAdapter.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MascotAdapter.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MascotAdapter.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MascotAdapterOnline.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MascotAdapterOnline.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MassTraceExtractor.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MassTraceExtractor.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MRMMapper.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MRMMapper.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MSGFPlusAdapter.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MSGFPlusAdapter.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MyriMatchAdapter.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MyriMatchAdapter.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MzTabExporter.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MzTabExporter.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/NoiseFilterGaussian.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/NoiseFilterGaussian.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/NoiseFilterSGolay.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/NoiseFilterSGolay.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OMSSAAdapter.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OMSSAAdapter.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenPepXL.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenPepXL.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenPepXLLF.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenPepXLLF.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenSwathAnalyzer.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenSwathAnalyzer.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenSwathAssayGenerator.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenSwathAssayGenerator.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenSwathChromatogramExtractor.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenSwathChromatogramExtractor.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenSwathConfidenceScoring.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenSwathConfidenceScoring.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenSwathDecoyGenerator.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenSwathDecoyGenerator.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenSwathFeatureXMLToTSV.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenSwathFeatureXMLToTSV.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenSwathRTNormalizer.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenSwathRTNormalizer.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PeakPickerHiRes.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PeakPickerHiRes.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PeakPickerWavelet.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PeakPickerWavelet.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PepNovoAdapter.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PepNovoAdapter.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PeptideIndexer.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PeptideIndexer.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PercolatorAdapter.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PercolatorAdapter.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PhosphoScoring.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PhosphoScoring.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PrecursorIonSelector.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PrecursorIonSelector.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PrecursorMassCorrector.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PrecursorMassCorrector.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/ProteinInference.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/ProteinInference.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/ProteinQuantifier.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/ProteinQuantifier.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/ProteinResolver.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/ProteinResolver.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PTModel.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PTModel.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PTPredict.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PTPredict.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/QualityControl.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/QualityControl.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/Resampler.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/Resampler.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/RTModel.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/RTModel.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/RTPredict.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/RTPredict.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SeedListGenerator.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SeedListGenerator.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpecLibSearcher.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpecLibSearcher.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterBernNorm.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterBernNorm.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterMarkerMower.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterMarkerMower.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterNLargest.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterNLargest.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterNormalizer.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterNormalizer.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterParentPeakMower.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterParentPeakMower.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterScaler.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterScaler.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterSqrtMower.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterSqrtMower.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterThresholdMower.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterThresholdMower.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterWindowMower.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterWindowMower.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraMerger.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraMerger.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/TextExporter.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/TextExporter.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/TOFCalibration.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/TOFCalibration.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/XFDR.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/XFDR.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/XTandemAdapter.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/XTandemAdapter.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/AccurateMassSearch.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/AccurateMassSearch.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/AssayGeneratorMetabo.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/AssayGeneratorMetabo.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/ClusterMassTraces.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/ClusterMassTraces.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/ClusterMassTracesByPrecursor.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/ClusterMassTracesByPrecursor.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/CVInspector.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/CVInspector.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/DatabaseFilter.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/DatabaseFilter.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/DecoyDatabase.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/DecoyDatabase.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/DeMeanderize.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/DeMeanderize.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/Digestor.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/Digestor.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/DigestorMotif.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/DigestorMotif.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/Epifany.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/Epifany.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/ERPairFinder.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/ERPairFinder.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/FeatureFinderMetaboIdent.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/FeatureFinderMetaboIdent.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/FFEval.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/FFEval.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/FuzzyDiff.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/FuzzyDiff.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/IDDecoyProbability.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/IDDecoyProbability.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/IDExtractor.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/IDExtractor.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/IDMassAccuracy.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/IDMassAccuracy.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/IDScoreSwitcher.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/IDScoreSwitcher.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/IDSplitter.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/IDSplitter.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/ImageCreator.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/ImageCreator.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/INIUpdater.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/INIUpdater.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/LabeledEval.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/LabeledEval.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/MassCalculator.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/MassCalculator.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/MetaboliteAdductDecharger.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/MetaboliteAdductDecharger.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/MetaboliteSpectralMatcher.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/MetaboliteSpectralMatcher.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/MetaProSIP.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/MetaProSIP.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/MRMPairFinder.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/MRMPairFinder.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/MRMTransitionGroupPicker.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/MRMTransitionGroupPicker.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/MSFraggerAdapter.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/MSFraggerAdapter.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/MSSimulator.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/MSSimulator.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/MSstatsConverter.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/MSstatsConverter.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/MultiplexResolver.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/MultiplexResolver.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/MzMLSplitter.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/MzMLSplitter.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/NovorAdapter.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/NovorAdapter.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/NucleicAcidSearchEngine.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/NucleicAcidSearchEngine.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/OpenMSDatabasesInfo.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/OpenMSDatabasesInfo.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/OpenMSInfo.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/OpenMSInfo.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/OpenSwathDIAPreScoring.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/OpenSwathDIAPreScoring.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/OpenSwathFileSplitter.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/OpenSwathFileSplitter.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/OpenSwathMzMLFileCacher.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/OpenSwathMzMLFileCacher.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/OpenSwathRewriteToFeatureXML.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/OpenSwathRewriteToFeatureXML.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/OpenSwathWorkflow.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/OpenSwathWorkflow.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/PeakPickerIterative.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/PeakPickerIterative.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/ProteomicsLFQ.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/ProteomicsLFQ.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/PSMFeatureExtractor.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/PSMFeatureExtractor.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/QCCalculator.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/QCCalculator.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/QCEmbedder.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/QCEmbedder.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/QCExporter.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/QCExporter.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/QCExtractor.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/QCExtractor.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/QCImporter.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/QCImporter.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/QCMerger.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/QCMerger.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/QCShrinker.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/QCShrinker.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/RNADigestor.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/RNADigestor.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/RNAMassCalculator.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/RNAMassCalculator.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/RNPxlSearch.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/RNPxlSearch.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/RNPxlXICFilter.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/RNPxlXICFilter.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/RTEvaluation.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/RTEvaluation.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/SemanticValidator.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/SemanticValidator.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/SequenceCoverageCalculator.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/SequenceCoverageCalculator.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/SimpleSearchEngine.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/SimpleSearchEngine.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/SiriusAdapter.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/SiriusAdapter.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/SpecLibCreator.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/SpecLibCreator.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/SpectraSTSearchAdapter.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/SpectraSTSearchAdapter.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/StaticModification.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/StaticModification.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/SvmTheoreticalSpectrumGeneratorTrainer.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/SvmTheoreticalSpectrumGeneratorTrainer.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/TargetedFileConverter.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/TargetedFileConverter.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/TICCalculator.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/TICCalculator.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/TransformationEvaluation.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/TransformationEvaluation.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/TriqlerConverter.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/TriqlerConverter.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/XMLValidator.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/XMLValidator.cpp... Building macro definition list... Building group list... Building directory list... Building namespace list... Building file list... Building class list... Building concept list... Computing nesting relations for classes... Associating documentation with classes... Associating documentation with concepts... Building example list... Searching for enumerations... Searching for documented typedefs... Searching for members imported via using declarations... Searching for included using directives... Searching for documented variables... Building interface member list... Building member list... Searching for friends... Searching for documented defines... Computing class inheritance relations... Computing class usage relations... Searching for tag less structs... Flushing cached template relations that have become invalid... Computing class relations... Add enum values to enums... Searching for member function documentation... Creating members for template instances... Building page list... Search for main page... Computing page relations... Determining the scope of groups... Sorting lists... Determining which enums are documented Computing member relations... Building full member lists recursively... Adding members to member groups. Computing member references... Inheriting documentation... Generating disk names... Adding source references... Adding xrefitems... Sorting member lists... Setting anonymous enum type... Computing dependencies between directories... Generating citations page... Counting members... Counting data structures... Resolving user defined references... Finding anchors and sections in the documentation... Transferring function references... Combining using relations... Adding members to index pages... Correcting members for VHDL... Computing tooltip texts... Generating style sheet... Generating search indices... Generating images for formulas in HTML... Generating example documentation... Generating file sources... Parsing code for file common-cmake-parameters.doxygen... Parsing code for file install-linux-bin.doxygen... Parsing code for file install-linux.doxygen... Parsing code for file install-macs-bin.doxygen... Parsing code for file install-macs.doxygen... Parsing code for file install-win-bin.doxygen... Parsing code for file install-win.doxygen... Parsing code for file Changelog.doxygen... Parsing code for file ExternalCode.doxygen... Parsing code for file FAQ.doxygen... Parsing code for file KnownDevBugs.doxygen... Parsing code for file Main.doxygen... Parsing code for file Modules.doxygen... Parsing code for file OpenMS_Tutorial_html.doxygen... Parsing code for file PyOpenMS.doxygen... Parsing code for file QuickStart.doxygen... Parsing code for file TOPP.doxygen... Parsing code for file TOPP_Tutorial_html.doxygen... Parsing code for file UTILS.doxygen... Parsing code for file OpenMS_Tutorial.doxygen... Parsing code for file TOPP_advanced.doxygen... Parsing code for file TOPP_concepts.doxygen... Parsing code for file TOPP_scripting.doxygen... Parsing code for file TOPPAS.doxygen... Parsing code for file TOPPAS.doxygen... Parsing code for file TOPPView_calling_topp.doxygen... Parsing code for file TOPPView_interface.doxygen... Parsing code for file INIFileEditor.cpp... Parsing code for file SwathWizard.cpp... Parsing code for file TOPPAS.cpp... Parsing code for file TOPPView.cpp... Parsing code for file INIFileEditorWindow.cpp... Parsing code for file QApplicationTOPP.cpp... Parsing code for file SwathWizardBase.cpp... Parsing code for file TOPPASBase.cpp... Parsing code for file TOPPViewBase.cpp... Parsing code for file BaselineFilter.cpp... Parsing code for file CometAdapter.cpp... Parsing code for file CompNovo.cpp... Parsing code for file CompNovoCID.cpp... Parsing code for file ConsensusID.cpp... Parsing code for file ConsensusMapNormalizer.cpp... Parsing code for file CruxAdapter.cpp... Parsing code for file DatabaseSuitability.cpp... Parsing code for file Decharger.cpp... Parsing code for file DTAExtractor.cpp... Parsing code for file EICExtractor.cpp... Parsing code for file ExecutePipeline.cpp... Parsing code for file ExternalCalibration.cpp... Parsing code for file FalseDiscoveryRate.cpp... Parsing code for file FeatureFinderCentroided.cpp... Parsing code for file FeatureFinderIdentification.cpp... Parsing code for file FeatureFinderIsotopeWavelet.cpp... Parsing code for file FeatureFinderMetabo.cpp... Parsing code for file FeatureFinderMRM.cpp... Parsing code for file FeatureFinderMultiplex.cpp... Generating code for file FeatureLinkerBase.cpp... Parsing code for file FeatureLinkerLabeled.cpp... Parsing code for file FeatureLinkerUnlabeled.cpp... Parsing code for file FeatureLinkerUnlabeledKD.cpp... Parsing code for file FeatureLinkerUnlabeledQT.cpp... Parsing code for file FidoAdapter.cpp... Parsing code for file FileConverter.cpp... Parsing code for file FileFilter.cpp... Parsing code for file FileInfo.cpp... Parsing code for file FileMerger.cpp... Parsing code for file GenericWrapper.cpp... Parsing code for file GNPSExport.cpp... Parsing code for file HighResPrecursorMassCorrector.cpp... Parsing code for file IDConflictResolver.cpp... Parsing code for file IDFileConverter.cpp... Parsing code for file IDFilter.cpp... Parsing code for file IDMapper.cpp... Parsing code for file IDMerger.cpp... Parsing code for file IDPosteriorErrorProbability.cpp... Parsing code for file IDRipper.cpp... Parsing code for file IDRTCalibration.cpp... Parsing code for file InclusionExclusionListCreator.cpp... Parsing code for file InternalCalibration.cpp... Parsing code for file IsobaricAnalyzer.cpp... Parsing code for file LuciphorAdapter.cpp... Parsing code for file MapAlignerIdentification.cpp... Parsing code for file MapAlignerPoseClustering.cpp... Parsing code for file MapAlignerSpectrum.cpp... Parsing code for file MapAlignerTreeGuided.cpp... Parsing code for file MapNormalizer.cpp... Parsing code for file MapRTTransformer.cpp... Parsing code for file MapStatistics.cpp... Parsing code for file MaRaClusterAdapter.cpp... Parsing code for file MascotAdapter.cpp... Parsing code for file MascotAdapterOnline.cpp... Parsing code for file MassTraceExtractor.cpp... Parsing code for file MRMMapper.cpp... Parsing code for file MSGFPlusAdapter.cpp... Parsing code for file MyriMatchAdapter.cpp... Parsing code for file MzTabExporter.cpp... Parsing code for file NoiseFilterGaussian.cpp... Parsing code for file NoiseFilterSGolay.cpp... Parsing code for file OMSSAAdapter.cpp... Parsing code for file OpenPepXL.cpp... Parsing code for file OpenPepXLLF.cpp... Parsing code for file OpenSwathAnalyzer.cpp... Parsing code for file OpenSwathAssayGenerator.cpp... Parsing code for file OpenSwathChromatogramExtractor.cpp... Parsing code for file OpenSwathConfidenceScoring.cpp... Parsing code for file OpenSwathDecoyGenerator.cpp... Parsing code for file OpenSwathFeatureXMLToTSV.cpp... Parsing code for file OpenSwathRTNormalizer.cpp... Parsing code for file PeakPickerHiRes.cpp... Parsing code for file PeakPickerWavelet.cpp... Parsing code for file PepNovoAdapter.cpp... Parsing code for file PeptideIndexer.cpp... Parsing code for file PercolatorAdapter.cpp... Parsing code for file PhosphoScoring.cpp... Parsing code for file PrecursorIonSelector.cpp... Parsing code for file PrecursorMassCorrector.cpp... Parsing code for file ProteinInference.cpp... Parsing code for file ProteinQuantifier.cpp... Parsing code for file ProteinResolver.cpp... Parsing code for file PTModel.cpp... Parsing code for file PTPredict.cpp... Parsing code for file QualityControl.cpp... Parsing code for file Resampler.cpp... Parsing code for file RTModel.cpp... Parsing code for file RTPredict.cpp... Parsing code for file SeedListGenerator.cpp... Parsing code for file SpecLibSearcher.cpp... Parsing code for file SpectraFilterBernNorm.cpp... Parsing code for file SpectraFilterMarkerMower.cpp... Parsing code for file SpectraFilterNLargest.cpp... Parsing code for file SpectraFilterNormalizer.cpp... Parsing code for file SpectraFilterParentPeakMower.cpp... Parsing code for file SpectraFilterScaler.cpp... Parsing code for file SpectraFilterSqrtMower.cpp... Parsing code for file SpectraFilterThresholdMower.cpp... Parsing code for file SpectraFilterWindowMower.cpp... Parsing code for file SpectraMerger.cpp... Parsing code for file TextExporter.cpp... Parsing code for file TOFCalibration.cpp... Parsing code for file XFDR.cpp... Parsing code for file XTandemAdapter.cpp... Parsing code for file AccurateMassSearch.cpp... Parsing code for file AssayGeneratorMetabo.cpp... Parsing code for file ClusterMassTraces.cpp... Parsing code for file ClusterMassTracesByPrecursor.cpp... Parsing code for file CVInspector.cpp... Parsing code for file DatabaseFilter.cpp... Parsing code for file DecoyDatabase.cpp... Parsing code for file DeMeanderize.cpp... Parsing code for file Digestor.cpp... Parsing code for file DigestorMotif.cpp... Parsing code for file Epifany.cpp... Parsing code for file ERPairFinder.cpp... Parsing code for file FeatureFinderMetaboIdent.cpp... Parsing code for file FFEval.cpp... Parsing code for file FuzzyDiff.cpp... Parsing code for file IDDecoyProbability.cpp... Parsing code for file IDExtractor.cpp... Parsing code for file IDMassAccuracy.cpp... Parsing code for file IDScoreSwitcher.cpp... Parsing code for file IDSplitter.cpp... Parsing code for file ImageCreator.cpp... Parsing code for file INIUpdater.cpp... Parsing code for file LabeledEval.cpp... Parsing code for file MassCalculator.cpp... Parsing code for file MetaboliteAdductDecharger.cpp... Parsing code for file MetaboliteSpectralMatcher.cpp... Parsing code for file MetaProSIP.cpp... Parsing code for file MRMPairFinder.cpp... Parsing code for file MRMTransitionGroupPicker.cpp... Parsing code for file MSFraggerAdapter.cpp... Parsing code for file MSSimulator.cpp... Parsing code for file MSstatsConverter.cpp... Parsing code for file MultiplexResolver.cpp... Parsing code for file MzMLSplitter.cpp... Parsing code for file NovorAdapter.cpp... Parsing code for file NucleicAcidSearchEngine.cpp... Parsing code for file OpenMSDatabasesInfo.cpp... Parsing code for file OpenMSInfo.cpp... Parsing code for file OpenSwathDIAPreScoring.cpp... Parsing code for file OpenSwathFileSplitter.cpp... Parsing code for file OpenSwathMzMLFileCacher.cpp... Parsing code for file OpenSwathRewriteToFeatureXML.cpp... Parsing code for file OpenSwathWorkflow.cpp... Parsing code for file PeakPickerIterative.cpp... Parsing code for file ProteomicsLFQ.cpp... Parsing code for file PSMFeatureExtractor.cpp... Parsing code for file QCCalculator.cpp... Parsing code for file QCEmbedder.cpp... Parsing code for file QCExporter.cpp... Parsing code for file QCExtractor.cpp... Parsing code for file QCImporter.cpp... Parsing code for file QCMerger.cpp... Parsing code for file QCShrinker.cpp... Parsing code for file RNADigestor.cpp... Parsing code for file RNAMassCalculator.cpp... Parsing code for file RNPxlSearch.cpp... Parsing code for file RNPxlXICFilter.cpp... Parsing code for file RTEvaluation.cpp... Parsing code for file SemanticValidator.cpp... Parsing code for file SequenceCoverageCalculator.cpp... Parsing code for file SimpleSearchEngine.cpp... Parsing code for file SiriusAdapter.cpp... Parsing code for file SpecLibCreator.cpp... Parsing code for file SpectraSTSearchAdapter.cpp... Parsing code for file StaticModification.cpp... Parsing code for file SvmTheoreticalSpectrumGeneratorTrainer.cpp... Parsing code for file TargetedFileConverter.cpp... Parsing code for file TICCalculator.cpp... Parsing code for file TransformationEvaluation.cpp... Parsing code for file TriqlerConverter.cpp... Parsing code for file XMLValidator.cpp... Generating file documentation... Generating docs for file common-cmake-parameters.doxygen... Generating docs for file install-linux-bin.doxygen... Generating docs for file install-linux.doxygen... Generating docs for file install-macs-bin.doxygen... Generating docs for file install-macs.doxygen... Generating docs for file install-win-bin.doxygen... Generating docs for file install-win.doxygen... Generating docs for file Changelog.doxygen... Generating docs for file ExternalCode.doxygen... Generating docs for file FAQ.doxygen... Generating docs for file KnownDevBugs.doxygen... Generating docs for file Main.doxygen... Generating docs for file Modules.doxygen... Generating docs for file OpenMS_Tutorial_html.doxygen... Generating docs for file PyOpenMS.doxygen... Generating docs for file QuickStart.doxygen... Generating docs for file TOPP.doxygen... Generating docs for file TOPP_Tutorial_html.doxygen... Generating docs for file UTILS.doxygen... Generating docs for file OpenMS_Tutorial.doxygen... Generating docs for file TOPP_advanced.doxygen... Generating docs for file TOPP_concepts.doxygen... Generating docs for file TOPP_scripting.doxygen... Generating docs for file TOPPAS.doxygen... Generating docs for file TOPPAS.doxygen... Generating docs for file TOPPView_calling_topp.doxygen... Generating docs for file TOPPView_interface.doxygen... Generating docs for file INIFileEditor.cpp... Generating docs for file SwathWizard.cpp... Generating docs for file TOPPAS.cpp... Generating docs for file TOPPView.cpp... Generating docs for file INIFileEditorWindow.cpp... Generating docs for file QApplicationTOPP.cpp... Generating docs for file SwathWizardBase.cpp... Generating docs for file TOPPASBase.cpp... Generating docs for file TOPPViewBase.cpp... Generating docs for file BaselineFilter.cpp... Generating docs for file CometAdapter.cpp... Generating docs for file CompNovo.cpp... Generating docs for file CompNovoCID.cpp... Generating docs for file ConsensusID.cpp... Generating docs for file ConsensusMapNormalizer.cpp... Generating docs for file CruxAdapter.cpp... Generating docs for file DatabaseSuitability.cpp... Generating docs for file Decharger.cpp... Generating docs for file DTAExtractor.cpp... Generating docs for file EICExtractor.cpp... Generating docs for file ExecutePipeline.cpp... Generating docs for file ExternalCalibration.cpp... Generating docs for file FalseDiscoveryRate.cpp... Generating docs for file FeatureFinderCentroided.cpp... Generating docs for file FeatureFinderIdentification.cpp... Generating docs for file FeatureFinderIsotopeWavelet.cpp... Generating docs for file FeatureFinderMetabo.cpp... Generating docs for file FeatureFinderMRM.cpp... Generating docs for file FeatureFinderMultiplex.cpp... Generating docs for file FeatureLinkerBase.cpp... Generating docs for file FeatureLinkerLabeled.cpp... Generating docs for file FeatureLinkerUnlabeled.cpp... Generating docs for file FeatureLinkerUnlabeledKD.cpp... Generating docs for file FeatureLinkerUnlabeledQT.cpp... Generating docs for file FidoAdapter.cpp... Generating docs for file FileConverter.cpp... Generating docs for file FileFilter.cpp... Generating docs for file FileInfo.cpp... Generating docs for file FileMerger.cpp... Generating docs for file GenericWrapper.cpp... Generating docs for file GNPSExport.cpp... Generating docs for file HighResPrecursorMassCorrector.cpp... Generating docs for file IDConflictResolver.cpp... Generating docs for file IDFileConverter.cpp... Generating docs for file IDFilter.cpp... Generating docs for file IDMapper.cpp... Generating docs for file IDMerger.cpp... Generating docs for file IDPosteriorErrorProbability.cpp... Generating docs for file IDRipper.cpp... Generating docs for file IDRTCalibration.cpp... Generating docs for file InclusionExclusionListCreator.cpp... Generating docs for file InternalCalibration.cpp... Generating docs for file IsobaricAnalyzer.cpp... Generating docs for file LuciphorAdapter.cpp... Generating docs for file MapAlignerIdentification.cpp... Generating docs for file MapAlignerPoseClustering.cpp... Generating docs for file MapAlignerSpectrum.cpp... Generating docs for file MapAlignerTreeGuided.cpp... Generating docs for file MapNormalizer.cpp... Generating docs for file MapRTTransformer.cpp... Generating docs for file MapStatistics.cpp... Generating docs for file MaRaClusterAdapter.cpp... Generating docs for file MascotAdapter.cpp... Generating docs for file MascotAdapterOnline.cpp... Generating docs for file MassTraceExtractor.cpp... Generating docs for file MRMMapper.cpp... Generating docs for file MSGFPlusAdapter.cpp... Generating docs for file MyriMatchAdapter.cpp... Generating docs for file MzTabExporter.cpp... Generating docs for file NoiseFilterGaussian.cpp... Generating docs for file NoiseFilterSGolay.cpp... Generating docs for file OMSSAAdapter.cpp... Generating docs for file OpenPepXL.cpp... Generating docs for file OpenPepXLLF.cpp... Generating docs for file OpenSwathAnalyzer.cpp... Generating docs for file OpenSwathAssayGenerator.cpp... Generating docs for file OpenSwathChromatogramExtractor.cpp... Generating docs for file OpenSwathConfidenceScoring.cpp... Generating docs for file OpenSwathDecoyGenerator.cpp... Generating docs for file OpenSwathFeatureXMLToTSV.cpp... Generating docs for file OpenSwathRTNormalizer.cpp... Generating docs for file PeakPickerHiRes.cpp... Generating docs for file PeakPickerWavelet.cpp... Generating docs for file PepNovoAdapter.cpp... Generating docs for file PeptideIndexer.cpp... Generating docs for file PercolatorAdapter.cpp... Generating docs for file PhosphoScoring.cpp... Generating docs for file PrecursorIonSelector.cpp... Generating docs for file PrecursorMassCorrector.cpp... Generating docs for file ProteinInference.cpp... Generating docs for file ProteinQuantifier.cpp... Generating docs for file ProteinResolver.cpp... Generating docs for file PTModel.cpp... Generating docs for file PTPredict.cpp... Generating docs for file QualityControl.cpp... Generating docs for file Resampler.cpp... Generating docs for file RTModel.cpp... Generating docs for file RTPredict.cpp... Generating docs for file SeedListGenerator.cpp... Generating docs for file SpecLibSearcher.cpp... Generating docs for file SpectraFilterBernNorm.cpp... Generating docs for file SpectraFilterMarkerMower.cpp... Generating docs for file SpectraFilterNLargest.cpp... Generating docs for file SpectraFilterNormalizer.cpp... Generating docs for file SpectraFilterParentPeakMower.cpp... Generating docs for file SpectraFilterScaler.cpp... Generating docs for file SpectraFilterSqrtMower.cpp... Generating docs for file SpectraFilterThresholdMower.cpp... Generating docs for file SpectraFilterWindowMower.cpp... Generating docs for file SpectraMerger.cpp... Generating docs for file TextExporter.cpp... Generating docs for file TOFCalibration.cpp... Generating docs for file XFDR.cpp... Generating docs for file XTandemAdapter.cpp... Generating docs for file AccurateMassSearch.cpp... Generating docs for file AssayGeneratorMetabo.cpp... Generating docs for file ClusterMassTraces.cpp... Generating docs for file ClusterMassTracesByPrecursor.cpp... Generating docs for file CVInspector.cpp... Generating docs for file DatabaseFilter.cpp... Generating docs for file DecoyDatabase.cpp... Generating docs for file DeMeanderize.cpp... Generating docs for file Digestor.cpp... Generating docs for file DigestorMotif.cpp... Generating docs for file Epifany.cpp... Generating docs for file ERPairFinder.cpp... Generating docs for file FeatureFinderMetaboIdent.cpp... Generating docs for file FFEval.cpp... Generating docs for file FuzzyDiff.cpp... Generating docs for file IDDecoyProbability.cpp... Generating docs for file IDExtractor.cpp... Generating docs for file IDMassAccuracy.cpp... Generating docs for file IDScoreSwitcher.cpp... Generating docs for file IDSplitter.cpp... Generating docs for file ImageCreator.cpp... Generating docs for file INIUpdater.cpp... Generating docs for file LabeledEval.cpp... Generating docs for file MassCalculator.cpp... Generating docs for file MetaboliteAdductDecharger.cpp... Generating docs for file MetaboliteSpectralMatcher.cpp... Generating docs for file MetaProSIP.cpp... Generating docs for file MRMPairFinder.cpp... Generating docs for file MRMTransitionGroupPicker.cpp... Generating docs for file MSFraggerAdapter.cpp... Generating docs for file MSSimulator.cpp... Generating docs for file MSstatsConverter.cpp... Generating docs for file MultiplexResolver.cpp... Generating docs for file MzMLSplitter.cpp... Generating docs for file NoWarning: Orthogonal edges do not currently handle edge labels. Try using xlabels. Warning: Orthogonal edges do not currently handle edge labels. Try using xlabels. vorAdapter.cpp... Generating docs for file NucleicAcidSearchEngine.cpp... Generating docs for file OpenMSDatabasesInfo.cpp... Generating docs for file OpenMSInfo.cpp... Generating docs for file OpenSwathDIAPreScoring.cpp... Generating docs for file OpenSwathFileSplitter.cpp... Generating docs for file OpenSwathMzMLFileCacher.cpp... Generating docs for file OpenSwathRewriteToFeatureXML.cpp... Generating docs for file OpenSwathWorkflow.cpp... Generating docs for file PeakPickerIterative.cpp... Generating docs for file ProteomicsLFQ.cpp... Generating docs for file PSMFeatureExtractor.cpp... Generating docs for file QCCalculator.cpp... Generating docs for file QCEmbedder.cpp... Generating docs for file QCExporter.cpp... Generating docs for file QCExtractor.cpp... Generating docs for file QCImporter.cpp... Generating docs for file QCMerger.cpp... Generating docs for file QCShrinker.cpp... Generating docs for file RNADigestor.cpp... Generating docs for file RNAMassCalculator.cpp... Generating docs for file RNPxlSearch.cpp... Generating docs for file RNPxlXICFilter.cpp... Generating docs for file RTEvaluation.cpp... Generating docs for file SemanticValidator.cpp... Generating docs for file SequenceCoverageCalculator.cpp... Generating docs for file SimpleSearchEngine.cpp... Generating docs for file SiriusAdapter.cpp... Generating docs for file SpecLibCreator.cpp... Generating docs for file SpectraSTSearchAdapter.cpp... Generating docs for file StaticModification.cpp... Generating docs for file SvmTheoreticalSpectrumGeneratorTrainer.cpp... Generating docs for file TargetedFileConverter.cpp... Generating docs for file TICCalculator.cpp... Generating docs for file TransformationEvaluation.cpp... Generating docs for file TriqlerConverter.cpp... Generating docs for file XMLValidator.cpp... Generating page documentation... Generating docs for page tutorial... Generating docs for page TOPP_advanced... Generating docs for page TOPP_concepts... Generating docs for page TOPP_example_qualitycontrol... Generating docs for page TOPP_general... Generating docs for page TOPP_example_handling... Generating docs for page TOPP_example_signalprocessing... Generating docs for page TOPP_example_id... Generating docs for page TOPP_example_mapalignment... Generating docs for page TOPP_example_featuredetection... Generating docs for page TOPP_example_featuregrouping... Generating docs for page TOPP_example_calibration... Generating docs for page TOPP_example_ppp... Generating docs for page TOPP_example_convert... Generating docs for page TOPPAS_general... Generating docs for page TOPPAS_interface... Generating docs for page TOPPAS_examples... Generating docs for page TOPPView_baseline_reduction... Generating docs for page TOPPView_smoothing... Generating docs for page TOPPView_peakpicking... Generating docs for page TOPPView_feature_detection_centroided... Generating docs for page TOPPView_introduction... Generating docs for page TOPPView_views... Generating docs for page TOPPView_modes... Generating docs for page TOPPView_analysis... Generating docs for page TOPPView_editing... Generating docs for page TOPPView_hotkeys... Generating docs for page ChangeLog... Generating docs for page external_code... Generating docs for page FAQ... Generating docs for page known_dev_bugs... Generating docs for page OpenMS_tutorial... Generating docs for page pyOpenMS... Generating docs for page Quickstart... Generating docs for page TOPP_documentation... Generating docs for page TOPP_tutorial... Generating docs for page TOPPAS_tutorial... Generating docs for page UTILS_documentation... Generating docs for page install_linux_bin... Generating docs for page install_linux... Generating docs for page install_mac_bin... Generating docs for page install_mac... Generating docs for page install_win_bin... Generating docs for page install_win... Generating docs for page TOPP_INIFileEditor... Generating docs for page TOPP_SwathWizard... Generating docs for page TOPP_TOPPAS... Generating docs for page TOPP_TOPPView... Generating docs for page TOPP_BaselineFilter... Generating docs for page TOPP_CometAdapter... Generating docs for page TOPP_CompNovo... Generating docs for page TOPP_CompNovoCID... Generating docs for page TOPP_ConsensusID... Generating docs for page TOPP_ConsensusMapNormalizer... Generating docs for page TOPP_CruxAdapter... Generating docs for page TOPP_DatabaseSuitability... Generating docs for page TOPP_Decharger... Generating docs for page TOPP_DTAExtractor... Generating docs for page TOPP_EICExtractor... Generating docs for page TOPP_ExecutePipeline... Generating docs for page TOPP_ExternalCalibration... Generating docs for page TOPP_FalseDiscoveryRate... Generating docs for page TOPP_FeatureFinderCentroided... Generating docs for page TOPP_FeatureFinderIdentification... Generating docs for page TOPP_FeatureFinderIsotopeWavelet... Generating docs for page TOPP_FeatureFinderMetabo... Generating docs for page TOPP_FeatureFinderMRM... Generating docs for page TOPP_FeatureFinderMultiplex... Generating docs for page TOPP_FeatureLinkerBase... Generating docs for page TOPP_FeatureLinkerLabeled... Generating docs for page TOPP_FeatureLinkerUnlabeled... Generating docs for page TOPP_FeatureLinkerUnlabeledKD... Generating docs for page TOPP_FeatureLinkerUnlabeledQT... Generating docs for page TOPP_FidoAdapter... Generating docs for page TOPP_FileConverter... Generating docs for page TOPP_FileFilter... Generating docs for page TOPP_FileInfo... Generating docs for page TOPP_FileMerger... Generating docs for page TOPP_GenericWrapper... Generating docs for page TOPP_GNPSExport... Generating docs for page TOPP_HighResPrecursorMassCorrector... Generating docs for page TOPP_IDConflictResolver... Generating docs for page TOPP_IDFileConverter... Generating docs for page TOPP_IDFilter... Generating docs for page TOPP_IDMapper... Generating docs for page TOPP_IDMerger... Generating docs for page TOPP_IDPosteriorErrorProbability... Generating docs for page TOPP_IDRipper... Generating docs for page TOPP_IDRTCalibration... Generating docs for page TOPP_InclusionExclusionListCreator... Generating docs for page TOPP_InternalCalibration... Generating docs for page TOPP_IsobaricAnalyzer... Generating docs for page TOPP_LuciphorAdapter... Generating docs for page TOPP_MapAlignerIdentification... Generating docs for page TOPP_MapAlignerPoseClustering... Generating docs for page TOPP_MapAlignerSpectrum... Generating docs for page TOPP_MapAlignerTreeGuided... Generating docs for page TOPP_MapNormalizer... Generating docs for page TOPP_MapRTTransformer... Generating docs for page TOPP_MapStatistics... Generating docs for page TOPP_MaRaClusterAdapter... Generating docs for page TOPP_MascotAdapter... Generating docs for page TOPP_MascotAdapterOnline... Generating docs for page TOPP_MassTraceExtractor... Generating docs for page TOPP_MRMMapper... Generating docs for page TOPP_MSGFPlusAdapter... Generating docs for page TOPP_MyriMatchAdapter... Generating docs for page TOPP_MzTabExporter... Generating docs for page TOPP_NoiseFilterGaussian... Generating docs for page TOPP_NoiseFilterSGolay... Generating docs for page TOPP_OMSSAAdapter... Generating docs for page TOPP_OpenPepXL... Generating docs for page TOPP_OpenPepXLLF... Generating docs for page TOPP_OpenSwathAnalyzer... Generating docs for page TOPP_OpenSwathAssayGenerator... Generating docs for page TOPP_OpenSwathChromatogramExtractor... Generating docs for page TOPP_OpenSwathConfidenceScoring... Generating docs for page TOPP_OpenSwathDecoyGenerator... Generating docs for page TOPP_OpenSwathFeatureXMLToTSV... Generating docs for page TOPP_OpenSwathRTNormalizer... Generating docs for page TOPP_PeakPickerHiRes... Generating docs for page TOPP_PeakPickerWavelet... Generating docs for page TOPP_PepNovoAdapter... Generating docs for page TOPP_PeptideIndexer... Generating docs for page TOPP_PercolatorAdapter... Generating docs for page TOPP_PhosphoScoring... Generating docs for page TOPP_PrecursorIonSelector... Generating docs for page TOPP_PrecursorMassCorrector... Generating docs for page TOPP_ProteinInference... Generating docs for page TOPP_ProteinQuantifier... Generating docs for page TOPP_ProteinResolver... Generating docs for page TOPP_PTModel... Generating docs for page TOPP_PTPredict... Generating docs for page TOPP_QualityControl... Generating docs for page TOPP_Resampler... Generating docs for page TOPP_RTModel... Generating docs for page TOPP_RTPredict... Generating docs for page TOPP_SeedListGenerator... Generating docs for page TOPP_SpecLibSearcher... Generating docs for page TOPP_SpectraFilterBernNorm... Generating docs for page TOPP_SpectraFilterMarkerMower... Generating docs for page TOPP_SpectraFilterNLargest... Generating docs for page TOPP_SpectraFilterNormalizer... Generating docs for page TOPP_SpectraFilterParentPeakMower... Generating docs for page TOPP_SpectraFilterScaler... Generating docs for page TOPP_SpectraFilterSqrtMower... Generating docs for page TOPP_SpectraFilterThresholdMower... Generating docs for page TOPP_SpectraFilterWindowMower... Generating docs for page TOPP_SpectraMerger... Generating docs for page TOPP_TextExporter... Generating docs for page TOPP_TOFCalibration... Generating docs for page TOPP_XFDR... Generating docs for page TOPP_XTandemAdapter... Generating docs for page UTILS_AccurateMassSearch... Generating docs for page UTILS_AssayGeneratorMetabo... Generating docs for page UTILS_ClusterMassTraces... Generating docs for page UTILS_ClusterMassTracesByPrecursor... Generating docs for page UTILS_CVInspector... Generating docs for page UTILS_DatabaseFilter... Generating docs for page UTILS_DecoyDatabase... Generating docs for page UTILS_DeMeanderize... Generating docs for page UTILS_Digestor... Generating docs for page UTILS_DigestorMotif... Generating docs for page UTILS_Epifany... Generating docs for page UTILS_ERPairFinder... Generating docs for page UTILS_FeatureFinderMetaboIdent... Generating docs for page UTILS_FFEval... Generating docs for page UTILS_FuzzyDiff... Generating docs for page UTILS_IDDecoyProbability... Generating docs for page UTILS_IDExtractor... Generating docs for page UTILS_IDMassAccuracy... Generating docs for page UTILS_IDScoreSwitcher... Generating docs for page UTILS_IDSplitter... Generating docs for page UTILS_ImageCreator... Generating docs for page UTILS_INIUpdater... Generating docs for page UTILS_LabeledEval... Generating docs for page UTILS_MassCalculator... Generating docs for page UTILS_MetaboliteAdductDecharger... Generating docs for page UTILS_MetaboliteSpectralMatcher... Generating docs for page UTILS_MetaProSIP... Generating docs for page UTILS_MRMPairFinder... Generating docs for page UTILS_MRMTransitionGroupPicker... Generating docs for page UTILS_MSFraggerAdapter... Generating docs for page UTILS_MSSimulator... Generating docs for page UTILS_MSstatsConverter... Generating docs for page UTILS_MultiplexResolver... Generating docs for page UTILS_MzMLSplitter... Generating docs for page UTILS_NovorAdapter... Generating docs for page UTILS_NucleicAcidSearchEngine... Generating docs for page UTILS_OpenMSDatabasesInfo... Generating docs for page UTILS_OpenSwathDIAPreScoring... Generating docs for page UTILS_OpenSwathFileSplitter... Generating docs for page UTILS_OpenSwathMzMLFileCacher... Generating docs for page UTILS_OpenSwathRewriteToFeatureXML... Generating docs for page UTILS_OpenSwathWorkflow... Generating docs for page UTILS_PeakPickerIterative... Generating docs for page UTILS_ProteomicsLFQ... Generating docs for page UTILS_PSMFeatureExtractor... Generating docs for page UTILS_QCCalculator... Generating docs for page UTILS_QCEmbedder... Generating docs for page UTILS_QCExporter... Generating docs for page UTILS_QCExtractor... Generating docs for page UTILS_QCImporter... Generating docs for page UTILS_QCMerger... Generating docs for page UTILS_QCShrinker... Generating docs for page UTILS_RNADigestor... Generating docs for page UTILS_RNAMassCalculator... Generating docs for page UTILS_RNPxlSearch... Generating docs for page UTILS_RNPxlXICFilter... Generating docs for page UTILS_RTEvaluation... Generating docs for page UTILS_SemanticValidator... Generating docs for page UTILS_SequenceCoverageCalculator... Generating docs for page UTILS_SimpleSearchEngine... Generating docs for page UTILS_SiriusAdapter... Generating docs for page UTILS_SpecLibCreator... Generating docs for page UTILS_SpectraSTSearchAdapter... Generating docs for page UTILS_StaticModification... Generating docs for page UTILS_SvmTheoreticalSpectrumGeneratorTrainer... Generating docs for page UTILS_TargetedFileConverter... Generating docs for page UTILS_TICCalculator... Generating docs for page UTILS_TransformationEvaluation... Generating docs for page UTILS_TriqlerConverter... Generating docs for page UTILS_XMLValidator... Generating docs for page todo... Generating docs for page experimental... Generating docs for page deprecated... Generating docs for page bug... Generating group documentation... Generating dependency graph for group Math Generating dependency graph for group MathFunctionsStatistics Generating dependency graph for group MathFunctionsMisc Generating dependency graph for group Format Generating dependency graph for group FileIO Generating dependency graph for group Filtering Generating dependency graph for group SpectraPreprocessers Generating dependency graph for group SpectraFilter Generating dependency graph for group PeakMarker Generating dependency graph for group Analysis Generating dependency graph for group SignalProcessing Generating dependency graph for group PeakPicking Generating dependency graph for group FeatureFinder Generating dependency graph for group MapAlignment Generating dependency graph for group FeatureGrouping Generating dependency graph for group Analysis_ID Generating dependency graph for group SpectraClustering Generating dependency graph for group Visual Generating dependency graph for group PlotWidgets Generating dependency graph for group TOPPView_elements Generating dependency graph for group TOPPAS_elements Generating dependency graph for group Dialogs Generating class documentation... Generating docs for compound NucleicAcidSearchEngine... Generating docs for nested compound NucleicAcidSearchEngine::HasInvalidLength... Generating docs for nested compound NucleicAcidSearchEngine::PrecursorInfo... Generating docs for compound TOPPBase... Generating docs for compound TOPPGNPSExport... Generating concept documentation... Generating namespace documentation... Generating docs for namespace OpenMS Generating graph info page... Generating directory documentation... Generating dependency graph for directory doxygen Generating dependency graph for directory install Generating dependency graph for directory OpenMS_tutorial Generating dependency graph for directory public Generating dependency graph for directory TOPP_tutorial Generating index page... Generating main page... Generating page index... Generating module index... Generating namespace index... Generating namespace member index... Generating concept index... Generating annotated compound index... Generating alphabetical compound index... Generating hierarchical class index... Generating graphical class hierarchy... Generating member index... Generating file index... Generating file member index... Generating example index... finalizing index lists... writing tag file... Running plantuml with JAVA... Running dot... Generating dot graphs using 3 parallel threads... 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documentation has been successfully created." The documentation has been successfully created. cd /builddir/build/BUILD/OpenMS-2.8.0/build/doc && /usr/bin/cmake -E echo "You can now open 'doc/index.html' in a web browser." You can now open 'doc/index.html' in a web browser. cd /builddir/build/BUILD/OpenMS-2.8.0/build/doc && /usr/bin/cmake -E echo "We build only a minimal doc since OpenMS was configured without HAS_XSERVER=Off." We build only a minimal doc since OpenMS was configured without HAS_XSERVER=Off. cd /builddir/build/BUILD/OpenMS-2.8.0/build/doc && /usr/bin/cmake -E echo "If you want the full doc, either execute cmake --build . --target doc manually" If you want the full doc, either execute cmake --build . --target doc manually cd /builddir/build/BUILD/OpenMS-2.8.0/build/doc && /usr/bin/cmake -E echo "or rerun cmake with -DHAS_XSERVER=On." or rerun cmake with -DHAS_XSERVER=On. cd /builddir/build/BUILD/OpenMS-2.8.0/build/doc && /usr/bin/cmake -E echo "" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Built target doc_minimal make[1]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/OpenMS-2.8.0/build/CMakeFiles 0 /usr/bin/make -f CMakeFiles/Makefile2 preinstall make[1]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[1]: Nothing to be done for 'preinstall'. make[1]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "Release" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/lib64/OpenMS/cmake/OpenMS/OpenMSConfig.cmake -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/lib64/OpenMS/cmake/OpenMS/OpenMSConfigVersion.cmake -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/lib64/OpenMS/cmake/OpenMS/OpenMSTargets.cmake -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/lib64/OpenMS/cmake/OpenMS/OpenMSTargets-release.cmake -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/lib64/OpenMS/libOpenSwathAlgo.so -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/lib64/OpenMS/libOpenSwathAlgo.so" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/OPENSWATHALGO/ALGO/Scoring.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/OPENSWATHALGO/ALGO/StatsHelpers.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataFrameWriter.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/OPENSWATHALGO/DATAACCESS/ITransition.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/OPENSWATHALGO/DATAACCESS/MockObjects.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/OPENSWATHALGO/DATAACCESS/SpectrumHelpers.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/OPENSWATHALGO/DATAACCESS/SwathMap.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/OPENSWATHALGO/DATAACCESS/TransitionExperiment.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/OPENSWATHALGO/DATAACCESS/TransitionHelper.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/OPENSWATHALGO/DATAACCESS/Transitions.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/OPENSWATHALGO/OpenSwathAlgoConfig.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/lib64/OpenMS/libOpenMS.so -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/lib64/OpenMS/libOpenMS.so" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/INTERFACES/DataStructures.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/INTERFACES/ISpectrumAccess.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/INTERFACES/IMSDataConsumer.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/CONCEPT/ClassTest.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/CONCEPT/Constants.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/CONCEPT/EnumHelpers.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/CONCEPT/Exception.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/CONCEPT/Factory.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/CONCEPT/FactoryBase.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/CONCEPT/FuzzyStringComparator.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/CONCEPT/GlobalExceptionHandler.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/CONCEPT/Helpers.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/CONCEPT/Init.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/CONCEPT/LogConfigHandler.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/CONCEPT/LogStream.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/CONCEPT/Macros.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/CONCEPT/MacrosTest.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/CONCEPT/PrecisionWrapper.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/CONCEPT/ProgressLogger.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/CONCEPT/RAIICleanup.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/CONCEPT/SingletonRegistry.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/CONCEPT/StreamHandler.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/CONCEPT/Types.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/CONCEPT/TypeAsString.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/CONCEPT/UniqueIdGenerator.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/CONCEPT/UniqueIdIndexer.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/CONCEPT/UniqueIdInterface.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/CONCEPT/VersionInfo.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/SYSTEM/BuildInfo.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/SYSTEM/ExternalProcess.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/SYSTEM/File.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/SYSTEM/FileWatcher.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/SYSTEM/JavaInfo.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/SYSTEM/NetworkGetRequest.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/SYSTEM/PythonInfo.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/SYSTEM/RWrapper.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/SYSTEM/StopWatch.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/SYSTEM/SysInfo.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/SYSTEM/UpdateCheck.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/MATH/MISC/BilinearInterpolation.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/MATH/MISC/BSpline2d.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/MATH/MISC/CubicSpline2d.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/MATH/MISC/EmgGradientDescent.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/MATH/MISC/GridSearch.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/MATH/MISC/LinearInterpolation.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/MATH/MISC/MathFunctions.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/MATH/MISC/NonNegativeLeastSquaresSolver.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/MATH/MISC/MSNumpress.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/MATH/MISC/RANSAC.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/MATH/MISC/RANSACModel.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/MATH/MISC/RANSACModelLinear.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/MATH/MISC/RANSACModelQuadratic.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/MATH/MISC/SplineBisection.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/MATH/MISC/NNLS/NNLS.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/MATH/STATISTICS/AsymmetricStatistics.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/MATH/STATISTICS/AveragePosition.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/MATH/STATISTICS/BasicStatistics.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/MATH/STATISTICS/GammaDistributionFitter.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/MATH/STATISTICS/GaussFitter.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/MATH/STATISTICS/GumbelDistributionFitter.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/MATH/STATISTICS/GumbelMaxLikelihoodFitter.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/MATH/STATISTICS/Histogram.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/MATH/STATISTICS/LinearRegression.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/MATH/STATISTICS/LinearRegressionWithoutIntercept.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/MATH/STATISTICS/QuadraticRegression.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/MATH/STATISTICS/PosteriorErrorProbabilityModel.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/MATH/STATISTICS/ROCCurve.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/MATH/STATISTICS/StatisticFunctions.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/DATASTRUCTURES/Adduct.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/DATASTRUCTURES/BinaryTreeNode.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/DATASTRUCTURES/CalibrationData.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/DATASTRUCTURES/ChargePair.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/DATASTRUCTURES/Compomer.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/DATASTRUCTURES/ConstRefVector.h -- Installing: 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Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/SpectraIDViewTab.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/SwathLibraryStats.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/TableView.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/TOPPASEdge.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/TOPPASInputFileListVertex.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/TOPPASMergerVertex.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/TOPPASOutputFileListVertex.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/TOPPASResource.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/TOPPASResources.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/TOPPASScene.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/TOPPASSplitterVertex.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/TOPPASToolVertex.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/TOPPASTreeView.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/TOPPASVertex.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/TOPPASWidget.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/TOPPViewMenu.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/TreeView.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/TVControllerBase.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/TVDIATreeTabController.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/TVIdentificationViewController.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/TVSpectraViewController.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/TVToolDiscovery.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/DIALOGS/DataFilterDialog.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/DIALOGS/FeatureEditDialog.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/DIALOGS/HistogramDialog.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/DIALOGS/LayerStatisticsDialog.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/DIALOGS/ListFilterDialog.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/DIALOGS/PythonModuleRequirement.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/DIALOGS/PythonSelector.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/DIALOGS/SaveImageDialog.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/DIALOGS/Plot1DGoToDialog.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/DIALOGS/Plot1DPrefDialog.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/DIALOGS/Plot2DGoToDialog.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/DIALOGS/Plot2DPrefDialog.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/DIALOGS/Plot3DPrefDialog.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/DIALOGS/SpectrumAlignmentDialog.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/DIALOGS/SwathTabWidget.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/DIALOGS/TOPPASIOMappingDialog.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/DIALOGS/TOPPASInputFileDialog.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/DIALOGS/TOPPASInputFilesDialog.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/DIALOGS/TOPPASOutputFilesDialog.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/DIALOGS/TOPPASToolConfigDialog.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/DIALOGS/TOPPASVertexNameDialog.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/DIALOGS/TOPPViewOpenDialog.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/DIALOGS/TOPPViewPrefDialog.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/DIALOGS/ToolsDialog.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/VISUALIZER/AcquisitionInfoVisualizer.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/VISUALIZER/AcquisitionVisualizer.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/VISUALIZER/BaseVisualizer.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/VISUALIZER/BaseVisualizerGUI.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/VISUALIZER/ContactPersonVisualizer.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/VISUALIZER/DataProcessingVisualizer.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/VISUALIZER/DigestionVisualizer.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/VISUALIZER/DocumentIdentifierVisualizer.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/VISUALIZER/GradientVisualizer.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/VISUALIZER/HPLCVisualizer.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/VISUALIZER/InstrumentSettingsVisualizer.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/VISUALIZER/InstrumentVisualizer.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/VISUALIZER/IonDetectorVisualizer.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/VISUALIZER/IonSourceVisualizer.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/VISUALIZER/MassAnalyzerVisualizer.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/VISUALIZER/MetaInfoDescriptionVisualizer.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/VISUALIZER/MetaInfoVisualizer.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/VISUALIZER/ModificationVisualizer.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/VISUALIZER/PeptideHitVisualizer.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/VISUALIZER/PrecursorVisualizer.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/VISUALIZER/ProteinHitVisualizer.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/VISUALIZER/SampleVisualizer.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/VISUALIZER/ScanWindowVisualizer.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/VISUALIZER/SoftwareVisualizer.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/VISUALIZER/SourceFileVisualizer.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/VISUALIZER/SpectrumSettingsVisualizer.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/VISUALIZER/TaggingVisualizer.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/VISUALIZER/ProductVisualizer.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/OpenMS/VISUAL/OpenMS_GUIConfig.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/INIFileEditor -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/INIFileEditor" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SwathWizard -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SwathWizard" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/TOPPAS -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/TOPPAS" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/TOPPView -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/TOPPView" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/BaselineFilter -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/BaselineFilter" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/CometAdapter -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/CometAdapter" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/CompNovo -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/CompNovo" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/CompNovoCID -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/CompNovoCID" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/ConsensusID -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/ConsensusID" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/ConsensusMapNormalizer -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/ConsensusMapNormalizer" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/CruxAdapter -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/CruxAdapter" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/DatabaseSuitability -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/DatabaseSuitability" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/Decharger -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/Decharger" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/DTAExtractor -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/DTAExtractor" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/EICExtractor -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/EICExtractor" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/ExternalCalibration -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/ExternalCalibration" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/FalseDiscoveryRate -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/FalseDiscoveryRate" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/FeatureFinderCentroided -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/FeatureFinderCentroided" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/FeatureFinderIdentification -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/FeatureFinderIdentification" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/FeatureFinderIsotopeWavelet -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/FeatureFinderIsotopeWavelet" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/FeatureFinderMetabo -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/FeatureFinderMetabo" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/FeatureFinderMRM -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/FeatureFinderMRM" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/FeatureFinderMultiplex -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/FeatureFinderMultiplex" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/FeatureLinkerLabeled -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/FeatureLinkerLabeled" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/FeatureLinkerUnlabeled -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/FeatureLinkerUnlabeled" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/FeatureLinkerUnlabeledKD -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/FeatureLinkerUnlabeledKD" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/FeatureLinkerUnlabeledQT -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/FeatureLinkerUnlabeledQT" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/FidoAdapter -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/FidoAdapter" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/FileConverter -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/FileConverter" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/FileFilter -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/FileFilter" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/FileInfo -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/FileInfo" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/FileMerger -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/FileMerger" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/GenericWrapper -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/GenericWrapper" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/GNPSExport -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/GNPSExport" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/HighResPrecursorMassCorrector -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/HighResPrecursorMassCorrector" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/IDConflictResolver -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/IDConflictResolver" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/IDFileConverter -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/IDFileConverter" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/IDFilter -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/IDFilter" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/IDMapper -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/IDMapper" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/IDMerger -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/IDMerger" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/IDPosteriorErrorProbability -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/IDPosteriorErrorProbability" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/IDRipper -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/IDRipper" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/IDRTCalibration -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/IDRTCalibration" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/InclusionExclusionListCreator -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/InclusionExclusionListCreator" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/InternalCalibration -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/InternalCalibration" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/IsobaricAnalyzer -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/IsobaricAnalyzer" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/LuciphorAdapter -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/LuciphorAdapter" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MapAlignerIdentification -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MapAlignerIdentification" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MapAlignerPoseClustering -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MapAlignerPoseClustering" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MapAlignerSpectrum -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MapAlignerSpectrum" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MapAlignerTreeGuided -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MapAlignerTreeGuided" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MapNormalizer -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MapNormalizer" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MapRTTransformer -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MapRTTransformer" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MapStatistics -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MapStatistics" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MaRaClusterAdapter -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MaRaClusterAdapter" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MascotAdapter -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MascotAdapter" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MascotAdapterOnline -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MascotAdapterOnline" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MassTraceExtractor -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MassTraceExtractor" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MRMMapper -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MRMMapper" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MSGFPlusAdapter -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MSGFPlusAdapter" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MyriMatchAdapter -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MyriMatchAdapter" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MzTabExporter -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MzTabExporter" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/NoiseFilterGaussian -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/NoiseFilterGaussian" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/NoiseFilterSGolay -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/NoiseFilterSGolay" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/OMSSAAdapter -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/OMSSAAdapter" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/OpenPepXL -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/OpenPepXL" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/OpenPepXLLF -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/OpenPepXLLF" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/OpenSwathAnalyzer -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/OpenSwathAnalyzer" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/OpenSwathAssayGenerator -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/OpenSwathAssayGenerator" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/OpenSwathChromatogramExtractor -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/OpenSwathChromatogramExtractor" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/OpenSwathConfidenceScoring -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/OpenSwathConfidenceScoring" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/OpenSwathDecoyGenerator -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/OpenSwathDecoyGenerator" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/OpenSwathFeatureXMLToTSV -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/OpenSwathFeatureXMLToTSV" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/OpenSwathRTNormalizer -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/OpenSwathRTNormalizer" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/PeakPickerHiRes -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/PeakPickerHiRes" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/PeakPickerWavelet -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/PeakPickerWavelet" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/PepNovoAdapter -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/PepNovoAdapter" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/PeptideIndexer -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/PeptideIndexer" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/PercolatorAdapter -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/PercolatorAdapter" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/PhosphoScoring -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/PhosphoScoring" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/PrecursorIonSelector -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/PrecursorIonSelector" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/PrecursorMassCorrector -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/PrecursorMassCorrector" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/ProteinInference -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/ProteinInference" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/ProteinQuantifier -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/ProteinQuantifier" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/ProteinResolver -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/ProteinResolver" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/PTModel -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/PTModel" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/PTPredict -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/PTPredict" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/QualityControl -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/QualityControl" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/RTModel -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/RTModel" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/RTPredict -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/RTPredict" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SeedListGenerator -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SeedListGenerator" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SpecLibSearcher -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SpecLibSearcher" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SpectraFilterBernNorm -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SpectraFilterBernNorm" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SpectraFilterMarkerMower -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SpectraFilterMarkerMower" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SpectraFilterNLargest -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SpectraFilterNLargest" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SpectraFilterNormalizer -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SpectraFilterNormalizer" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SpectraFilterParentPeakMower -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SpectraFilterParentPeakMower" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SpectraFilterScaler -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SpectraFilterScaler" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SpectraFilterSqrtMower -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SpectraFilterSqrtMower" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SpectraFilterThresholdMower -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SpectraFilterThresholdMower" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SpectraFilterWindowMower -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SpectraFilterWindowMower" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SpectraMerger -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SpectraMerger" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/TextExporter -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/TextExporter" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/TOFCalibration -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/TOFCalibration" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/XFDR -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/XFDR" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/XTandemAdapter -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/XTandemAdapter" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/ExecutePipeline -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/ExecutePipeline" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/Resampler -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/Resampler" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/AccurateMassSearch -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/AccurateMassSearch" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/AssayGeneratorMetabo -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/AssayGeneratorMetabo" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/ClusterMassTraces -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/ClusterMassTraces" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/ClusterMassTracesByPrecursor -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/ClusterMassTracesByPrecursor" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/CVInspector -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/CVInspector" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/DatabaseFilter -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/DatabaseFilter" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/DecoyDatabase -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/DecoyDatabase" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/DeMeanderize -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/DeMeanderize" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/Digestor -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/Digestor" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/DigestorMotif -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/DigestorMotif" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/Epifany -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/Epifany" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/ERPairFinder -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/ERPairFinder" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/FeatureFinderMetaboIdent -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/FeatureFinderMetaboIdent" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/FFEval -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/FFEval" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/FuzzyDiff -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/FuzzyDiff" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/IDDecoyProbability -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/IDDecoyProbability" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/IDExtractor -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/IDExtractor" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/IDMassAccuracy -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/IDMassAccuracy" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/IDScoreSwitcher -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/IDScoreSwitcher" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/IDSplitter -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/IDSplitter" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/LabeledEval -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/LabeledEval" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MassCalculator -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MassCalculator" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MetaboliteAdductDecharger -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MetaboliteAdductDecharger" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MetaboliteSpectralMatcher -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MetaboliteSpectralMatcher" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MetaProSIP -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MetaProSIP" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MRMPairFinder -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MRMPairFinder" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MSFraggerAdapter -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MSFraggerAdapter" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MSSimulator -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MSSimulator" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MSstatsConverter -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MSstatsConverter" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MultiplexResolver -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MultiplexResolver" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MzMLSplitter -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MzMLSplitter" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/NovorAdapter -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/NovorAdapter" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/NucleicAcidSearchEngine -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/NucleicAcidSearchEngine" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/OpenMSDatabasesInfo -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/OpenMSDatabasesInfo" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/OpenMSInfo -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/OpenMSInfo" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/PeakPickerIterative -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/PeakPickerIterative" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/PSMFeatureExtractor -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/PSMFeatureExtractor" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/QCCalculator -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/QCCalculator" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/QCEmbedder -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/QCEmbedder" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/QCExporter -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/QCExporter" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/QCExtractor -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/QCExtractor" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/QCImporter -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/QCImporter" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/QCMerger -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/QCMerger" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/QCShrinker -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/QCShrinker" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/ProteomicsLFQ -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/ProteomicsLFQ" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/RNADigestor -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/RNADigestor" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/RNAMassCalculator -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/RNAMassCalculator" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/RNPxlXICFilter -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/RNPxlXICFilter" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/RNPxlSearch -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/RNPxlSearch" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/RTEvaluation -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/RTEvaluation" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SemanticValidator -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SemanticValidator" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SequenceCoverageCalculator -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SequenceCoverageCalculator" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SimpleSearchEngine -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SimpleSearchEngine" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SiriusAdapter -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SiriusAdapter" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SpecLibCreator -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SpecLibCreator" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SpectraSTSearchAdapter -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SpectraSTSearchAdapter" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/StaticModification -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/StaticModification" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SvmTheoreticalSpectrumGeneratorTrainer -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SvmTheoreticalSpectrumGeneratorTrainer" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/TICCalculator -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/TICCalculator" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/TransformationEvaluation -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/TransformationEvaluation" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/TriqlerConverter -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/TriqlerConverter" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/XMLValidator -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/XMLValidator" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/TargetedFileConverter -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/TargetedFileConverter" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/OpenSwathDIAPreScoring -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/OpenSwathDIAPreScoring" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/OpenSwathMzMLFileCacher -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/OpenSwathMzMLFileCacher" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/OpenSwathWorkflow -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/OpenSwathWorkflow" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/OpenSwathFileSplitter -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/OpenSwathFileSplitter" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/OpenSwathRewriteToFeatureXML -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/OpenSwathRewriteToFeatureXML" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MRMTransitionGroupPicker -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MRMTransitionGroupPicker" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/ImageCreator -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/ImageCreator" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/INIUpdater -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/INIUpdater" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/doc/openms-doc/html -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/doc/openms-doc/html/structNucleicAcidSearchEngine_1_1PrecursorInfo.html -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/doc/openms-doc/html/inherits.html -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/doc/openms-doc/html/group__Visual.html -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/doc/openms-doc/html/group__TOPPView__elements.html -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/doc/openms-doc/html/group__TOPPAS__elements.html -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/doc/openms-doc/html/group__SpectraPreprocessers.html -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/doc/openms-doc/html/group__SpectraFilter.html -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/doc/openms-doc/html/group__SpectraClustering.html -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/doc/openms-doc/html/group__SignalProcessing.html -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/doc/openms-doc/html/group__PlotWidgets.html -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/doc/openms-doc/html/group__PeakPicking.html -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/doc/openms-doc/html/group__PeakMarker.html -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/doc/openms-doc/html/group__MathFunctionsStatistics.html -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/doc/openms-doc/html/group__MathFunctionsMisc.html -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/doc/openms-doc/html/group__Math.html -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/doc/openms-doc/html/group__MapAlignment.html -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/doc/openms-doc/html/group__Format.html -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/doc/openms-doc/html/group__Filtering.html -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/doc/openms-doc/html/group__FileIO.html -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/doc/openms-doc/html/group__FeatureGrouping.html -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/doc/openms-doc/html/group__FeatureFinder.html -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/doc/openms-doc/html/group__Dialogs.html -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/doc/openms-doc/html/group__Analysis__ID.html -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/doc/openms-doc/html/group__Analysis.html -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/doc/openms-doc/html/graph_legend.html -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/doc/openms-doc/html/dir_ebd3f5f0482b02ff4c3b89293f04ed6c.html -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/doc/openms-doc/html/dir_c9f25c269f6c79194ec5671a83695c64.html -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/doc/openms-doc/html/dir_c39c27c466e6a9c3e8f373e7a3dd7828.html -- Installing: 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/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SequenceCoverageCalculator /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SimpleSearchEngine /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SiriusAdapter /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SpecLibCreator /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SpecLibSearcher /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SpectraFilterBernNorm /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SpectraFilterMarkerMower /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SpectraFilterNLargest /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SpectraFilterNormalizer /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SpectraFilterParentPeakMower /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SpectraFilterScaler /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SpectraFilterSqrtMower /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SpectraFilterThresholdMower /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SpectraFilterWindowMower /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SpectraMerger /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SpectraSTSearchAdapter /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/StaticModification /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SvmTheoreticalSpectrumGeneratorTrainer /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SwathWizard /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/TICCalculator /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/TOFCalibration /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/TOPPAS /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/TOPPView /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/TargetedFileConverter /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/TextExporter /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/TransformationEvaluation /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/TriqlerConverter /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/XFDR /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/XMLValidator /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/XTandemAdapter + patchelf --set-rpath /usr/lib64/OpenMS /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/lib64/OpenMS/libOpenMS.so /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/lib64/OpenMS/libOpenMS_GUI.so /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/lib64/OpenMS/libOpenSwathAlgo.so + mkdir -p /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/icons/TOPP/pixmaps + install -pm 644 /builddir/build/SOURCES/TOPPView.png /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/icons/TOPP + install -pm 644 /builddir/build/SOURCES/TOPPAS.png /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/icons/TOPP + install -pm 644 /builddir/build/SOURCES/INIFileEditor.png /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/icons/TOPP + mkdir -p /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/applications + desktop-file-install --set-key=Exec '--set-value=env OPENMS_DATA_PATH=/usr/share/OpenMS TOPPAS' --set-icon=/usr/share/icons/TOPP/TOPPAS.png --set-key=StartupNotify --set-value=true --add-category=Utility --dir=/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/applications share/OpenMS/DESKTOP/TOPPAS.desktop + desktop-file-install --set-key=Exec '--set-value=env OPENMS_DATA_PATH=/usr/share/OpenMS TOPPView %U' --set-icon=/usr/share/icons/TOPP/TOPPView.png --set-key=StartupNotify --set-value=true --add-category=Utility --dir=/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/applications share/OpenMS/DESKTOP/TOPPView.desktop + desktop-file-install --add-category=Utility --set-key=Exec '--set-value=env OPENMS_DATA_PATH=/usr/share/OpenMS INIFileEditor' --dir=/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/applications /builddir/build/SOURCES/inifileeditor.desktop + mkdir -p /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/metainfo + install -pm 644 share/OpenMS/DESKTOP/TOPPAS.appdata.xml share/OpenMS/DESKTOP/TOPPView.appdata.xml /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/metainfo/ + cp -a /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/doc/openms-doc/html html + cp -p /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/doc/openms-doc/index.html ./ + rm -rf /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/doc/openms-doc/html + rm -f /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/doc/openms-doc/index.html + sed -i '1 s|^#!/usr/bin/env Rscript\b|#!/usr/bin/Rscript|' /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/OpenMS/SCRIPTS/plot_trafo.R + chmod 0755 /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/OpenMS/SCRIPTS/plot_trafo.R + rm -rf /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/include/thirdparty + /usr/bin/find-debuginfo -j2 --strict-build-id -m -i --build-id-seed 2.8.0-0.5.fc39 --unique-debug-suffix -2.8.0-0.5.fc39.x86_64 --unique-debug-src-base openms-2.8.0-0.5.fc39.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/OpenMS-2.8.0 extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/AccurateMassSearch extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/AssayGeneratorMetabo extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/BaselineFilter extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/CVInspector extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/ClusterMassTraces extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/ClusterMassTracesByPrecursor extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/CometAdapter extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/CompNovo extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/CompNovoCID extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/ConsensusID extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/ConsensusMapNormalizer extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/CruxAdapter extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/DTAExtractor extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/DatabaseFilter extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/DatabaseSuitability extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/DeMeanderize extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/Decharger extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/DecoyDatabase extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/Digestor extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/DigestorMotif extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/EICExtractor extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/ERPairFinder extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/Epifany extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/ExecutePipeline extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/ExternalCalibration extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/FFEval extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/FalseDiscoveryRate extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/FeatureFinderCentroided extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/FeatureFinderIdentification extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/FeatureFinderIsotopeWavelet extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/FeatureFinderMRM extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/FeatureFinderMetabo extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/FeatureFinderMetaboIdent extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/FeatureFinderMultiplex extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/FeatureLinkerLabeled extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/FeatureLinkerUnlabeled extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/FeatureLinkerUnlabeledKD extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/FeatureLinkerUnlabeledQT extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/FidoAdapter extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/FileConverter extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/FileFilter extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/FileInfo extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/FileMerger extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/FuzzyDiff extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/GNPSExport extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/GenericWrapper extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/HighResPrecursorMassCorrector extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/IDConflictResolver extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/IDDecoyProbability extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/IDExtractor extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/IDFileConverter extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/IDFilter extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/IDMapper extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/IDMassAccuracy extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/IDMerger extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/IDPosteriorErrorProbability extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/IDRTCalibration extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/IDRipper extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/IDScoreSwitcher extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/IDSplitter extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/INIFileEditor extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/INIUpdater extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/ImageCreator extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/InclusionExclusionListCreator extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/InternalCalibration extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/IsobaricAnalyzer extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/LabeledEval extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/LuciphorAdapter extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MRMMapper extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MRMPairFinder extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MRMTransitionGroupPicker extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MSFraggerAdapter extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MSGFPlusAdapter extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MSSimulator extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MSstatsConverter extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MaRaClusterAdapter extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MapAlignerIdentification extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MapAlignerPoseClustering extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MapAlignerSpectrum extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MapAlignerTreeGuided extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MapNormalizer extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MapRTTransformer extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MapStatistics extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MascotAdapter extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MascotAdapterOnline extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MassCalculator extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MassTraceExtractor extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MetaProSIP extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MetaboliteAdductDecharger extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MetaboliteSpectralMatcher extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MultiplexResolver extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MyriMatchAdapter extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MzMLSplitter extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/MzTabExporter extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/NoiseFilterGaussian extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/NoiseFilterSGolay extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/NovorAdapter extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/NucleicAcidSearchEngine extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/OMSSAAdapter extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/OpenMSDatabasesInfo extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/OpenMSInfo extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/OpenPepXL extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/OpenPepXLLF extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/OpenSwathAnalyzer extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/OpenSwathAssayGenerator extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/OpenSwathChromatogramExtractor extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/OpenSwathConfidenceScoring extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/OpenSwathDIAPreScoring extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/OpenSwathDecoyGenerator extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/OpenSwathFeatureXMLToTSV extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/OpenSwathFileSplitter extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/OpenSwathMzMLFileCacher extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/OpenSwathRTNormalizer extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/OpenSwathRewriteToFeatureXML extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/OpenSwathWorkflow extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/PSMFeatureExtractor extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/PTModel extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/PTPredict extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/PeakPickerHiRes extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/PeakPickerIterative extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/PeakPickerWavelet extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/PepNovoAdapter extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/PeptideIndexer extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/PercolatorAdapter extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/PhosphoScoring extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/PrecursorIonSelector extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/PrecursorMassCorrector extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/ProteinInference extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/ProteinQuantifier extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/ProteinResolver extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/ProteomicsLFQ extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/QCCalculator extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/QCEmbedder extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/QCExporter extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/QCExtractor extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/QCImporter extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/QCMerger extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/QCShrinker extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/QualityControl extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/RNADigestor extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/RNAMassCalculator extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/RNPxlSearch extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/RNPxlXICFilter extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/RTEvaluation extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/RTModel extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/RTPredict extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/Resampler extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SeedListGenerator extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SemanticValidator extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SequenceCoverageCalculator extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SimpleSearchEngine extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SiriusAdapter extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SpecLibCreator extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SpecLibSearcher extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SpectraFilterBernNorm extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SpectraFilterMarkerMower extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SpectraFilterNLargest extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SpectraFilterNormalizer extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SpectraFilterParentPeakMower extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SpectraFilterScaler extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SpectraFilterSqrtMower extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SpectraFilterThresholdMower extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SpectraFilterWindowMower extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SpectraMerger extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SpectraSTSearchAdapter extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/StaticModification extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SvmTheoreticalSpectrumGeneratorTrainer extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/SwathWizard extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/TICCalculator extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/TOFCalibration extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/TOPPAS extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/TOPPView extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/TargetedFileConverter extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/TextExporter extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/TransformationEvaluation extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/TriqlerConverter extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/XFDR extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/XMLValidator extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/bin/XTandemAdapter extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/lib64/OpenMS/libOpenMS.so extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/lib64/OpenMS/libOpenMS_GUI.so extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/lib64/OpenMS/libOpenSwathAlgo.so dwz: Allocatable section in ./usr/bin/AccurateMassSearch-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/AssayGeneratorMetabo-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/BaselineFilter-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/CVInspector-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/ClusterMassTraces-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/ClusterMassTracesByPrecursor-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/CometAdapter-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/CompNovo-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/CompNovoCID-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/ConsensusID-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/ConsensusMapNormalizer-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/CruxAdapter-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/DTAExtractor-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/DatabaseFilter-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/DatabaseSuitability-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/DeMeanderize-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/Decharger-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/DecoyDatabase-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/Digestor-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/DigestorMotif-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/EICExtractor-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/ERPairFinder-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/Epifany-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/ExecutePipeline-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/ExternalCalibration-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FFEval-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FalseDiscoveryRate-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FeatureFinderCentroided-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FeatureFinderIdentification-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FeatureFinderIsotopeWavelet-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FeatureFinderMRM-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FeatureFinderMetabo-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FeatureFinderMetaboIdent-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FeatureFinderMultiplex-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FeatureLinkerLabeled-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FeatureLinkerUnlabeled-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FeatureLinkerUnlabeledKD-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FeatureLinkerUnlabeledQT-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FidoAdapter-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FileFilter-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FileInfo-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FuzzyDiff-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/GNPSExport-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/GenericWrapper-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/HighResPrecursorMassCorrector-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/IDDecoyProbability-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/IDFileConverter-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/IDMassAccuracy-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/IDMerger-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/IDPosteriorErrorProbability-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/IDRipper-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/IDScoreSwitcher-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/IDSplitter-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/INIFileEditor-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/INIUpdater-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/ImageCreator-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/InclusionExclusionListCreator-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/InternalCalibration-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/IsobaricAnalyzer-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MRMMapper-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MRMPairFinder-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MRMTransitionGroupPicker-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MSFraggerAdapter-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MSGFPlusAdapter-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MSSimulator-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MSstatsConverter-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MaRaClusterAdapter-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MapAlignerIdentification-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MapAlignerPoseClustering-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MapAlignerSpectrum-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MapAlignerTreeGuided-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MapNormalizer-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MapRTTransformer-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MapStatistics-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MascotAdapter-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MascotAdapterOnline-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MassTraceExtractor-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MetaProSIP-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MetaboliteAdductDecharger-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MetaboliteSpectralMatcher-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MultiplexResolver-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MzMLSplitter-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MzTabExporter-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/NoiseFilterGaussian-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/NovorAdapter-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/NucleicAcidSearchEngine-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/OMSSAAdapter-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/OpenMSDatabasesInfo-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/OpenMSInfo-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/OpenPepXL-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/OpenPepXLLF-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/OpenSwathAnalyzer-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/OpenSwathAssayGenerator-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/OpenSwathConfidenceScoring-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/OpenSwathDIAPreScoring-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/OpenSwathDecoyGenerator-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/OpenSwathFeatureXMLToTSV-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/OpenSwathFileSplitter-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/OpenSwathMzMLFileCacher-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/OpenSwathRTNormalizer-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/OpenSwathRewriteToFeatureXML-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/PSMFeatureExtractor-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/PTModel-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/PTPredict-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/PeakPickerHiRes-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/PeakPickerIterative-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/PeakPickerWavelet-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/PepNovoAdapter-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/PeptideIndexer-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/PercolatorAdapter-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/PrecursorIonSelector-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/PrecursorMassCorrector-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/ProteinInference-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/ProteinQuantifier-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/ProteinResolver-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/ProteomicsLFQ-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/QCCalculator-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/QCEmbedder-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/QCExporter-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/QCExtractor-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/QCImporter-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/QCMerger-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/QCShrinker-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/QualityControl-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/RNADigestor-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/RNAMassCalculator-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/RNPxlSearch-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/RNPxlXICFilter-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/RTModel-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/RTPredict-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/Resampler-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SeedListGenerator-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SemanticValidator-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SequenceCoverageCalculator-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SimpleSearchEngine-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SiriusAdapter-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SpecLibCreator-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SpecLibSearcher-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SpectraFilterBernNorm-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SpectraFilterMarkerMower-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SpectraFilterNLargest-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SpectraFilterNormalizer-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SpectraFilterParentPeakMower-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SpectraFilterScaler-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SpectraFilterSqrtMower-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SpectraFilterThresholdMower-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SpectraFilterWindowMower-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SpectraMerger-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SpectraSTSearchAdapter-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/StaticModification-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SvmTheoreticalSpectrumGeneratorTrainer-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SwathWizard-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/TOPPAS-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/TargetedFileConverter-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/TextExporter-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/TransformationEvaluation-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/TriqlerConverter-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/XFDR-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/XMLValidator-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/XTandemAdapter-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/lib64/OpenMS/libOpenMS_GUI.so-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/lib64/OpenMS/libOpenSwathAlgo.so-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/AssayGeneratorMetabo-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/BaselineFilter-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/AccurateMassSearch-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/CVInspector-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/ClusterMassTraces-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/ClusterMassTracesByPrecursor-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/CometAdapter-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/CompNovo-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/CompNovoCID-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/ConsensusMapNormalizer-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/ConsensusID-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/CruxAdapter-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/DatabaseFilter-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/DTAExtractor-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/DeMeanderize-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/Decharger-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/DatabaseSuitability-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/DecoyDatabase-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/Digestor-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/DigestorMotif-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/EICExtractor-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/ERPairFinder-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/ExecutePipeline-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/ExternalCalibration-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/Epifany-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FFEval-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FeatureFinderCentroided-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FalseDiscoveryRate-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FeatureFinderIdentification-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FeatureFinderIsotopeWavelet-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FeatureFinderMRM-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FeatureFinderMetabo-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FeatureFinderMetaboIdent-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FeatureFinderMultiplex-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FeatureLinkerLabeled-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FeatureLinkerUnlabeledKD-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FeatureLinkerUnlabeled-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FeatureLinkerUnlabeledQT-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FidoAdapter-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FileConverter-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FileFilter-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FileInfo-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FuzzyDiff-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/GNPSExport-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/GenericWrapper-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/HighResPrecursorMassCorrector-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FileMerger-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/IDConflictResolver-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/IDDecoyProbability-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/IDExtractor-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/IDFilter-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/IDFileConverter-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/IDMapper-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/IDMassAccuracy-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/IDPosteriorErrorProbability-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/IDRTCalibration-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/IDRipper-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/IDMerger-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/IDScoreSwitcher-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/IDSplitter-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/INIFileEditor-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/INIUpdater-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/ImageCreator-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/InclusionExclusionListCreator-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/InternalCalibration-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/LabeledEval-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/IsobaricAnalyzer-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MRMMapper-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/LuciphorAdapter-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MRMPairFinder-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MRMTransitionGroupPicker-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MSFraggerAdapter-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MSGFPlusAdapter-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MSSimulator-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MSstatsConverter-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MaRaClusterAdapter-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MapAlignerPoseClustering-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MapAlignerIdentification-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MapAlignerTreeGuided-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MapNormalizer-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MapAlignerSpectrum-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MapStatistics-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MapRTTransformer-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MascotAdapter-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MascotAdapterOnline-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MassCalculator-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MassTraceExtractor-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MetaboliteAdductDecharger-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MetaProSIP-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MetaboliteSpectralMatcher-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MultiplexResolver-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MzMLSplitter-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MyriMatchAdapter-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/NoiseFilterGaussian-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/NoiseFilterSGolay-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MzTabExporter-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/NovorAdapter-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/OMSSAAdapter-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/OpenMSDatabasesInfo-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/OpenMSInfo-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/OpenPepXL-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/OpenPepXLLF-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/NucleicAcidSearchEngine-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/OpenSwathAssayGenerator-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/OpenSwathAnalyzer-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/OpenSwathConfidenceScoring-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/OpenSwathChromatogramExtractor-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/OpenSwathDecoyGenerator-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/OpenSwathDIAPreScoring-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/OpenSwathFileSplitter-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/OpenSwathFeatureXMLToTSV-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/OpenSwathMzMLFileCacher-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/OpenSwathRewriteToFeatureXML-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/OpenSwathRTNormalizer-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/PSMFeatureExtractor-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/OpenSwathWorkflow-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/PTModel-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/PTPredict-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/PeakPickerHiRes-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/PeakPickerWavelet-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/PeakPickerIterative-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/PepNovoAdapter-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/PeptideIndexer-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/PhosphoScoring-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/PercolatorAdapter-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/PrecursorIonSelector-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/PrecursorMassCorrector-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/ProteinInference-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/ProteinQuantifier-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/ProteinResolver-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/QCCalculator-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/QCEmbedder-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/QCExporter-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/QCExtractor-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/QCImporter-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/QCMerger-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/QCShrinker-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/ProteomicsLFQ-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/RNADigestor-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/QualityControl-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/RNAMassCalculator-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/RNPxlXICFilter-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/RTEvaluation-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/RTModel-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/RTPredict-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/RNPxlSearch-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/Resampler-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SeedListGenerator-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SemanticValidator-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SimpleSearchEngine-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SequenceCoverageCalculator-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SpecLibCreator-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SiriusAdapter-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SpectraFilterBernNorm-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SpecLibSearcher-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SpectraFilterMarkerMower-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SpectraFilterNLargest-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SpectraFilterNormalizer-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SpectraFilterParentPeakMower-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SpectraFilterScaler-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SpectraFilterSqrtMower-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SpectraFilterThresholdMower-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SpectraFilterWindowMower-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SpectraSTSearchAdapter-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/StaticModification-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SpectraMerger-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SvmTheoreticalSpectrumGeneratorTrainer-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SwathWizard-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/TOFCalibration-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/TICCalculator-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/TOPPAS-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/TOPPView-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/TargetedFileConverter-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/TransformationEvaluation-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/TriqlerConverter-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/TextExporter-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/XFDR-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/XMLValidator-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/XTandemAdapter-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/lib64/OpenMS/libOpenMS_GUI.so-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/lib64/OpenMS/libOpenSwathAlgo.so-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/lib64/OpenMS/libOpenMS.so-2.8.0-0.5.fc39.x86_64.debug after non-allocatable ones original debug info size: 1275380kB, size after compression: 1193944kB /usr/bin/sepdebugcrcfix: Updated 20 CRC32s, 162 CRC32s did match. 49763 blocks + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j2 + /usr/lib/rpm/redhat/brp-python-hardlink Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.DD1OXy + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd OpenMS-2.8.0 + appstream-util validate-relax --nonet /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/metainfo/TOPPAS.appdata.xml /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/metainfo/TOPPView.appdata.xml /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/metainfo/TOPPAS.appdata.xml: OK /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/metainfo/TOPPView.appdata.xml: OK + desktop-file-validate /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/applications/TOPPAS.desktop /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/applications/TOPPView.desktop /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/applications/inifileeditor.desktop /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/applications/TOPPAS.desktop: hint: value "Science;Biology;Chemistry;Utility;" for key "Categories" in group "Desktop Entry" contains more than one main category; application might appear more than once in the application menu /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/applications/TOPPView.desktop: hint: value "Science;Biology;Chemistry;Utility;" for key "Categories" in group "Desktop Entry" contains more than one main category; application might appear more than once in the application menu /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/applications/inifileeditor.desktop: hint: value "Science;Biology;Chemistry;Utility;" for key "Categories" in group "Desktop Entry" contains more than one main category; application might appear more than once in the application menu + RPM_EC=0 ++ jobs -p + exit 0 Processing files: openms-2.8.0-0.5.fc39.x86_64 Provides: application() application(TOPPAS.desktop) application(TOPPView.desktop) application(inifileeditor.desktop) metainfo() metainfo(TOPPAS.appdata.xml) metainfo(TOPPView.appdata.xml) openms = 2.8.0-0.5.fc39 openms(x86-64) = 2.8.0-0.5.fc39 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: glibc >= 2.37.9000-14 ld-linux-x86-64.so.2()(64bit) ld-linux-x86-64.so.2(GLIBC_2.3)(64bit) libCbc.so.3()(64bit) libCgl.so.1()(64bit) libCoinUtils.so.3()(64bit) libOsiClp.so.1()(64bit) libQt5Core.so.5()(64bit) libQt5Core.so.5(Qt_5)(64bit) libQt5Core.so.5(Qt_5.15)(64bit) libQt5Gui.so.5()(64bit) libQt5Gui.so.5(Qt_5)(64bit) libQt5Network.so.5()(64bit) libQt5Network.so.5(Qt_5)(64bit) libQt5Sql.so.5()(64bit) libQt5Sql.so.5(Qt_5)(64bit) libQt5Svg.so.5()(64bit) libQt5Svg.so.5(Qt_5)(64bit) libQt5WebChannel.so.5()(64bit) libQt5WebChannel.so.5(Qt_5)(64bit) libQt5WebEngineWidgets.so.5()(64bit) libQt5WebEngineWidgets.so.5(Qt_5)(64bit) libQt5Widgets.so.5()(64bit) libQt5Widgets.so.5(Qt_5)(64bit) libWm5Mathematics.so.5()(64bit) libbz2.so.1()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_2.4)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgcc_s.so.1(GCC_3.4)(64bit) libgomp.so.1()(64bit) libgomp.so.1(GOMP_1.0)(64bit) libgomp.so.1(GOMP_4.0)(64bit) libgomp.so.1(GOMP_4.5)(64bit) libgomp.so.1(OMP_1.0)(64bit) libgomp.so.1(OMP_3.0)(64bit) libhdf5.so.200()(64bit) libhdf5_cpp.so.200()(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.23)(64bit) libm.so.6(GLIBC_2.27)(64bit) libm.so.6(GLIBC_2.29)(64bit) libm.so.6(GLIBC_2.38)(64bit) libsqlite3.so.0()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.11)(64bit) libstdc++.so.6(CXXABI_1.3.13)(64bit) libstdc++.so.6(CXXABI_1.3.2)(64bit) libstdc++.so.6(CXXABI_1.3.3)(64bit) libstdc++.so.6(CXXABI_1.3.5)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.19)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.22)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libsvm.so.3()(64bit) libxerces-c-3.2.so()(64bit) libz.so.1()(64bit) rtld(GNU_HASH) Obsoletes: python2-openms < 0:2.4.0-1 python3-openms < 0:2.7.0-2 Processing files: openms-tools-2.8.0-0.5.fc39.x86_64 Provides: openms-tools = 2.8.0-0.5.fc39 openms-tools(x86-64) = 2.8.0-0.5.fc39 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libQt5Core.so.5()(64bit) libQt5Core.so.5(Qt_5)(64bit) libQt5Core.so.5(Qt_5.15)(64bit) libQt5Gui.so.5()(64bit) libQt5Gui.so.5(Qt_5)(64bit) libQt5Widgets.so.5()(64bit) libQt5Widgets.so.5(Qt_5)(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.4)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgomp.so.1()(64bit) libgomp.so.1(GOMP_1.0)(64bit) libgomp.so.1(GOMP_4.0)(64bit) libgomp.so.1(GOMP_4.5)(64bit) libgomp.so.1(OMP_1.0)(64bit) libgomp.so.1(OMP_3.0)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.29)(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.5)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libxerces-c-3.2.so()(64bit) rtld(GNU_HASH) Processing files: openms-devel-2.8.0-0.5.fc39.x86_64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.mx4ezs + umask 022 + cd /builddir/build/BUILD + cd OpenMS-2.8.0 + DOCDIR=/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/doc/openms-devel + export LC_ALL=C + LC_ALL=C + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/doc/openms-devel + cp -pr /builddir/build/BUILD/OpenMS-2.8.0/CHANGELOG /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/doc/openms-devel + cp -pr /builddir/build/BUILD/OpenMS-2.8.0/AUTHORS /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/doc/openms-devel + cp -pr /builddir/build/BUILD/OpenMS-2.8.0/README /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/doc/openms-devel + cp -pr /builddir/build/BUILD/OpenMS-2.8.0/README.md /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/doc/openms-devel + cp -pr /builddir/build/BUILD/OpenMS-2.8.0/CODE_OF_CONDUCT.md /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/doc/openms-devel + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.nxz4Jn + umask 022 + cd /builddir/build/BUILD + cd OpenMS-2.8.0 + LICENSEDIR=/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/licenses/openms-devel + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/licenses/openms-devel + cp -pr /builddir/build/BUILD/OpenMS-2.8.0/LICENSE /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/licenses/openms-devel + RPM_EC=0 ++ jobs -p + exit 0 Provides: openms-devel = 2.8.0-0.5.fc39 openms-devel(x86-64) = 2.8.0-0.5.fc39 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: openms-data-2.8.0-0.5.fc39.x86_64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.iFFYhi + umask 022 + cd /builddir/build/BUILD + cd OpenMS-2.8.0 + DOCDIR=/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/doc/openms-data + export LC_ALL=C + LC_ALL=C + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/doc/openms-data + cp -pr /builddir/build/BUILD/OpenMS-2.8.0/CHANGELOG /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/doc/openms-data + cp -pr /builddir/build/BUILD/OpenMS-2.8.0/AUTHORS /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/doc/openms-data + cp -pr /builddir/build/BUILD/OpenMS-2.8.0/README /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/doc/openms-data + cp -pr /builddir/build/BUILD/OpenMS-2.8.0/README.md /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/doc/openms-data + cp -pr /builddir/build/BUILD/OpenMS-2.8.0/CODE_OF_CONDUCT.md /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/doc/openms-data + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.oaABT2 + umask 022 + cd /builddir/build/BUILD + cd OpenMS-2.8.0 + LICENSEDIR=/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/licenses/openms-data + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/licenses/openms-data + cp -pr /builddir/build/BUILD/OpenMS-2.8.0/LICENSE /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/licenses/openms-data + RPM_EC=0 ++ jobs -p + exit 0 Provides: openms-data = 2.8.0-0.5.fc39 openms-data(x86-64) = 2.8.0-0.5.fc39 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: /usr/bin/Rscript Processing files: openms-doc-2.8.0-0.5.fc39.x86_64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.xsD08M + umask 022 + cd /builddir/build/BUILD + cd OpenMS-2.8.0 + DOCDIR=/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/doc/openms-doc + export LC_ALL=C + LC_ALL=C + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/doc/openms-doc + cp -pr /builddir/build/BUILD/OpenMS-2.8.0/CHANGELOG /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/doc/openms-doc + cp -pr /builddir/build/BUILD/OpenMS-2.8.0/AUTHORS /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/doc/openms-doc + cp -pr /builddir/build/BUILD/OpenMS-2.8.0/README /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/doc/openms-doc + cp -pr /builddir/build/BUILD/OpenMS-2.8.0/README.md /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/doc/openms-doc + cp -pr /builddir/build/BUILD/OpenMS-2.8.0/CODE_OF_CONDUCT.md /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/doc/openms-doc + cp -pr /builddir/build/BUILD/OpenMS-2.8.0/html /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/doc/openms-doc + cp -pr /builddir/build/BUILD/OpenMS-2.8.0/index.html /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/doc/openms-doc + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.QlHKJg + umask 022 + cd /builddir/build/BUILD + cd OpenMS-2.8.0 + LICENSEDIR=/builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/licenses/openms-doc + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/licenses/openms-doc + cp -pr /builddir/build/BUILD/OpenMS-2.8.0/LICENSE /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64/usr/share/licenses/openms-doc + RPM_EC=0 ++ jobs -p + exit 0 Provides: openms-doc = 2.8.0-0.5.fc39 openms-doc(x86-64) = 2.8.0-0.5.fc39 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: openms-debugsource-2.8.0-0.5.fc39.x86_64 Provides: openms-debugsource = 2.8.0-0.5.fc39 openms-debugsource(x86-64) = 2.8.0-0.5.fc39 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: openms-debuginfo-2.8.0-0.5.fc39.x86_64 Provides: debuginfo(build-id) = 002dbcbe67f5a4a72c894ae5806ff6134a223cd8 debuginfo(build-id) = 0123dd58b8ae88ef68adb3a1a9950e8dc360860e debuginfo(build-id) = 035f25c3e325dd5bcd8e6c1ef08958d0259f49d2 debuginfo(build-id) = 067db7bbe83e088c4d432aa9345c5604cf7a5d8b debuginfo(build-id) = 093e433cb84793ab7536e464d1dbe1e5cc4ba7c5 debuginfo(build-id) = 0bdbcb231b94f20989ea9a2652a000ca035dda60 debuginfo(build-id) = 0c01bd08916d83a6106190edfebeb1f91bbe6cc2 debuginfo(build-id) = 1212fa7aade69f96b67f37438fda92ebfe1b17a7 debuginfo(build-id) = 13780f5a74953e7282c782c284fc760453ea31c8 debuginfo(build-id) = 166faf4dcc5b17e883db1529b8a0494759a237d7 debuginfo(build-id) = 179e0760d6e4b3bf3aac9d975a5e0ed686ad91c8 debuginfo(build-id) = 1cf553b8bdaf933a5b6624843f3d5506896ec57f debuginfo(build-id) = 1de8c162545b5a0dc540a91926391494e31113c7 debuginfo(build-id) = 1ed4c031dc7f2d38d3f33eacb4b5f40090962f03 debuginfo(build-id) = 233d8497b2cf29658122b9dc3c36c37ea05d2b1f debuginfo(build-id) = 23d0f8da5b38867acd7fa02b42966baa5bad2808 debuginfo(build-id) = 25163ca03c6b420042d2402aea7d2d0c4f3bde69 debuginfo(build-id) = 251d20b38e9813be679ce55e1761702a09aa61fb debuginfo(build-id) = 270b09c0400f2544aa215ccc2d789b674cc2af27 debuginfo(build-id) = 28384da3dedcb2a09c9ab02bf0b80f883f7346c3 debuginfo(build-id) = 29a525f05f52c60b31dc5ad56bb6de6d1cfcbf3a debuginfo(build-id) = 2b6a9561f2cdeb93ff3f00be116150aa4f63716e debuginfo(build-id) = 2d03741c35e5ceb43d27922fc894026df4273df7 debuginfo(build-id) = 2d145cc1ccc8734134e5e27512fc97be325ae4e7 debuginfo(build-id) = 304aaf6902c9ddba8fbd62051c0efb1edea1f276 debuginfo(build-id) = 3a9faff3669f2279402fc10d87c02f9e5fd44a23 debuginfo(build-id) = 3b419e02137d5aa073e5db93cd4c34de4bee1dcb debuginfo(build-id) = 3b5fe69d157d64c7a70508a344487040e570b8ab debuginfo(build-id) = 3cddeb437e4dc69331e16e1a576467244b49a597 debuginfo(build-id) = 3daa34f2345ca496ae004a3fc749769ebb934724 debuginfo(build-id) = 470663fc434134e5eb3902b7f2dcf1f05bc017e0 debuginfo(build-id) = 4c154314a5ef8cdf5137b95009a57595ee1d2148 debuginfo(build-id) = 5134158428fd6c2aca66e2ede0d5e5864880c967 debuginfo(build-id) = 515f79e7e2e79a688a7d8194f5e1c61b3ced32ec debuginfo(build-id) = 5194addfe1e9040c92cc5ca3b941035b135b99b3 debuginfo(build-id) = 56fefcd55b541dfb425265a267aa4a1e6677a9ab debuginfo(build-id) = 5705621a6dca42cc0fb491e04882910d7f3a362d debuginfo(build-id) = 57aef1528546368fb6de967db5d077b6ad69adb1 debuginfo(build-id) = 59552d2bb51d6a44ba6e21ca134d938c9530e9c4 debuginfo(build-id) = 5ce4a60b9d8ecd80c3f2c5fbbc15134c4869e2db debuginfo(build-id) = 615f857e3d4d93bdf0ba38dc60e3189799e741f9 debuginfo(build-id) = 63b52a65a2d3d4e149c0276a50ed19e7e7ff3e83 debuginfo(build-id) = 63df3e72a6fb07308989a768504b7008e7ed50c6 debuginfo(build-id) = 65af25cae03b4bcd1d8354015cdf3bf00b1e0595 debuginfo(build-id) = 66587a1635fe8ccb68fa9d80db317fd317f9536b debuginfo(build-id) = 6cdc55048430218517daa8d406630912ed6797d7 debuginfo(build-id) = 6d70bd0b6c838625988a0de7fc8ff84ac0eee917 debuginfo(build-id) = 6e05bfafc84c086d581e6d5c4d04d573fe20de44 debuginfo(build-id) = 7200908d560682494047fed6afbe416490d6a8ba debuginfo(build-id) = 724bb00c781b0ae771ccb0dab3cb0a17646a43b0 debuginfo(build-id) = 7a0e3b5659210b00e50d793ef27ae8d88cdea08a debuginfo(build-id) = 7ab68bca5b852a94ada120df91d85520ef63981d debuginfo(build-id) = 7ae4afc40e5d40e046fe5e0d58e0cb5efc043af6 debuginfo(build-id) = 7c9ca361a1d016972dd98360293a9fe4b88bbd82 debuginfo(build-id) = 7cb66b835bbf999d9cfb7aadfffa4f4752e60215 debuginfo(build-id) = 7f6cd4d9bb45555b6ec8a96a4ca7930ab59b5507 debuginfo(build-id) = 88d4e68f1ea9e034c315cc854515f9af5dd1e210 debuginfo(build-id) = 8a54bb22cd78e4bd96b84fddc294200301fbb57c debuginfo(build-id) = 94f73bd42fd0b889a59b5f54d3d11522fa8b5526 debuginfo(build-id) = 98028766a40e4dcee85ee31525deb840aba8cdb2 debuginfo(build-id) = 98533387b11bb8825101862c6e676bcd390c129e debuginfo(build-id) = 9c80ab2bdfacbd9c380a0e6845c636815f0addad debuginfo(build-id) = 9c8bad25f848ec9cc18ef3b849f814509be25550 debuginfo(build-id) = 9e89bb011662b8b6547ee152c13e4e17a2636e66 debuginfo(build-id) = a66f29d20745705f590b0818359a99562b18dfe4 debuginfo(build-id) = a76018b344800154e5f52a6904e8e8e25cf981c0 debuginfo(build-id) = a7d871c58a188c72d5bc3e4ce2eba3122df04a70 debuginfo(build-id) = aa0ddffbef1768f894be4cde8533fb53677fbf0b debuginfo(build-id) = abe658663b69c1d4c7a372686869c6921a7ffbad debuginfo(build-id) = ac4b41ffcc2e5688052f55c5bdc3c610d5ba7fd7 debuginfo(build-id) = aca5f4097591aea283feeaef58a5a1d185de4fea debuginfo(build-id) = aeaeec74dff343910f38a5089cbc03ccbe8374d9 debuginfo(build-id) = af82855ac653e806b3b9af5c3e0b086b2aa5a80f debuginfo(build-id) = b125425fc1f5e0ca15490da3f119914ced4b4738 debuginfo(build-id) = b2c5073625b56e4853f9698d775b0807a13d0cbe debuginfo(build-id) = b593a70f66649e4891002b38262bb3bcd885b43e debuginfo(build-id) = b721037c1b475ea2b4045e926c2b8364623d9cca debuginfo(build-id) = b9123761f206860b808bbca8489f637b6dd3c6cf debuginfo(build-id) = b919ed439a06e0b97d16251c0d1c45875b92d4fa debuginfo(build-id) = bc0ecb8489b0df6a5cfa96905999a7b8e413b5db debuginfo(build-id) = bd399a6b1648c80c0a1b6d319195997d06aa172b debuginfo(build-id) = bdfcdd1a8d7526ed9a89e97f5e8a6c69bfeac661 debuginfo(build-id) = bf3a6e7bf65377fe036ea2e3ada08150689bd230 debuginfo(build-id) = bff8f429eb416443308ddb536910251bd3d9598a debuginfo(build-id) = c145b899ee346919551f713fc831d69564bfb5e0 debuginfo(build-id) = c230645ba3778493a0e1c414a4d8d43c384f6b60 debuginfo(build-id) = c37292401399fcbe31b2dbb6342737f151ec23e3 debuginfo(build-id) = c41070a379524f55869f2fdfbdb19d2cb88f53ec debuginfo(build-id) = c5ea9971fb61aee5a071700bf4668fb10f934cb4 debuginfo(build-id) = c7c6e5ed05de51461e2c543a48e44878571ab5eb debuginfo(build-id) = c8bd7b59a51c8dbeff4c333b41e3c116637a3e0e debuginfo(build-id) = c8ce21617ccb5107de5f37537b648d12b2d42c0d debuginfo(build-id) = c96741be9e63be658b32b3ff090ef4c787dcd1e7 debuginfo(build-id) = cbe50cf25a131363d5b250989ec1c5f90f56c0dc debuginfo(build-id) = d11a5de4bff300c808e4797be65753ffb01819c2 debuginfo(build-id) = d1d86915b0050011ae3721fc5392404d8ded4614 debuginfo(build-id) = d2fe866540b6d08329114cdccb3107151917a33d debuginfo(build-id) = d3bdefeb2d7911ca80c8815a13571c3bedfa4467 debuginfo(build-id) = e137c388837c94fc65980ab1f93ad448d83cac49 debuginfo(build-id) = e37f6a38f460b344c758738983b1c612fce22383 debuginfo(build-id) = e5a56ade8e8558795252ebe021f9ace1dc0f172f debuginfo(build-id) = e71ab138fe04f549d6293ab30a791412d4b8ee24 debuginfo(build-id) = ec4bcbcda0e718c5c9903423e5bcf0ceb73ffde8 debuginfo(build-id) = ef61ff82c13575c94f96f7eac5303fe9283cf2bc debuginfo(build-id) = f004efb8e84adee2bd555b9dea5cb55e0a03bfc9 debuginfo(build-id) = f091c8436325132696ffa9a1e6723fa289c57b23 debuginfo(build-id) = f12e72f355caa92c70a5641baa507073e83dd3e4 debuginfo(build-id) = f3f23e175e7a5c6330d3f971e383b04480eec6ea debuginfo(build-id) = f61fe95b4aacefe9822d74f5d0c56ea45d4d81e6 debuginfo(build-id) = f9348ab382588e6e787d37a90b1f2fe376c301d5 openms-debuginfo = 2.8.0-0.5.fc39 openms-debuginfo(x86-64) = 2.8.0-0.5.fc39 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: openms-debugsource(x86-64) = 2.8.0-0.5.fc39 Processing files: openms-tools-debuginfo-2.8.0-0.5.fc39.x86_64 Provides: debuginfo(build-id) = 008571fe31224265038b130767f0fa1a46abe54f debuginfo(build-id) = 15cce4a4f5427beab1102bffb646d9478d9a1705 debuginfo(build-id) = 16a1f7e564cc21e12779ec47e641ded122d596af debuginfo(build-id) = 1f0c1a5187adde1a8a3c5b85a7f0024dfb7dace7 debuginfo(build-id) = 1fef88a86943d11000ccc2a2f479b0ebc0a8961c debuginfo(build-id) = 259d0ab52006463e61ca9700224dd5798bfcb5ae debuginfo(build-id) = 2643da17b2b0a2b65ec4bb04a44ebe5f39a6feee debuginfo(build-id) = 27768acfe9c1e78c254ca9d7b01c57ecd2d3a766 debuginfo(build-id) = 2b29851eabd2f19d20ec3e7df609878cb55c2283 debuginfo(build-id) = 2c1142df057c46b659ec47b26e3f7107c3006db5 debuginfo(build-id) = 2c2ded807035957d8d76af5419fe47c17bb06341 debuginfo(build-id) = 2c6f55a47c568552c3019c816c1eb5630e02170c debuginfo(build-id) = 2cfb30b1d0b6b0fadb8fec30e2b09abf6df4310f debuginfo(build-id) = 309411d645a38000d5fb09d8275da02be30643b6 debuginfo(build-id) = 32400832424ef95d9f852f477f510f74662bebbf debuginfo(build-id) = 34842151ff09024e0de1b9d6cdf6a0abae374a15 debuginfo(build-id) = 3672b7f9a443588db50549b20552c50399de9a65 debuginfo(build-id) = 39eab86bd7180ce0d536b577c2fb7badb1f39bab debuginfo(build-id) = 3a1be9977d1ba45a797f3a47c88b82f068ab664b debuginfo(build-id) = 4a6f59416b7cb828c9ed449c954bef5a3e6d4847 debuginfo(build-id) = 51a1eccae30d7fee0cb71fefa6d0556228a48143 debuginfo(build-id) = 56234e88d4f1d982fea4c5932f2a7f7ebb5540c8 debuginfo(build-id) = 588f50a6ba512b28390e0f348ae9082b4ca8824a debuginfo(build-id) = 59e3c34bdb707cb4bf8d41ecf15b90b9ca5af5e3 debuginfo(build-id) = 5b2dc2178a4a6a7b5375a9353d6316b4d13a627b debuginfo(build-id) = 5ce74c5c1fddebd018235f3f26aedd94b4081289 debuginfo(build-id) = 5e0b3d1910fcf4cff9bb9e5749fa3c4c7e580d73 debuginfo(build-id) = 613d24e72e3c2b69e055178f80d2e63ae7c9771d debuginfo(build-id) = 639224c6bfc8cb74333edaf4faac8d3f5170e6b0 debuginfo(build-id) = 63e61249fb8b115b1eb52de1f255c72d669fbd72 debuginfo(build-id) = 65939ae513173e6d70aadb530db223c3106c9207 debuginfo(build-id) = 7103bae9efec43e3fce52539d354a42534071be6 debuginfo(build-id) = 72df3c43b924fc3d8606304bbc834e8fa1817b66 debuginfo(build-id) = 7b76e2e0f9259e35f2096110bc023cb447615d90 debuginfo(build-id) = 7e3621e0128c3d8a9350b49d5c0ef9944213fc0f debuginfo(build-id) = 7ee01d1988e4dbf63f43d8c8c1be60b29d59ed72 debuginfo(build-id) = 7ef9575673345c10d8dec6377ad4906c6504877e debuginfo(build-id) = 822e8433bab9a2c03a4f017dd4d3456c9d636b90 debuginfo(build-id) = 87e501556c7285e068c8f5e527f0662d1d348361 debuginfo(build-id) = 8e2b37f1e1626819941373071858cee4982b7007 debuginfo(build-id) = 903f84912176777b0199cec4c5c7fc686dc77468 debuginfo(build-id) = 95e2b65d93f38ee240977913ae4c7cd1e1d2cce8 debuginfo(build-id) = 97afb4d9599b0b5cbb1076c9f82f921a5cd4033a debuginfo(build-id) = 98ccdbd97540ddb0a23922229027199e71489baa debuginfo(build-id) = 9af1948c5f8221c74a7b99e6f1218ee356a318c4 debuginfo(build-id) = 9bc92a9fc0489d77dc44dee316c2c53f4cd9a6c6 debuginfo(build-id) = 9eaf131a30f32e4daf991ad88d8dcbefca93d128 debuginfo(build-id) = a03d75222ba1efd667efc2ff9ab1521fbdf4d0b5 debuginfo(build-id) = a2aacd76d81ba1d2047b830515fd69e410589d19 debuginfo(build-id) = a78b3575610196b3c5b62988490e91cf2a61a47a debuginfo(build-id) = af42ac5bd270d4b3ae0117a7a6746f6423d3eb27 debuginfo(build-id) = b81cf5ac524f8dc43449c06abc1c0f392c043d8b debuginfo(build-id) = bd0b3cd6ca65fc8099d0df0590397ca8fd984a73 debuginfo(build-id) = c96741be9e63be658b32b3ff090ef4c787dcd1e7 debuginfo(build-id) = cdc828188e170219031e09ba1413e4e4f2382ae8 debuginfo(build-id) = ce562dd3f74feb3ee552faa2b08fff433efdee68 debuginfo(build-id) = d01bf6f28be8e25bb6c2aa57e04fb3dfa37b9c2a debuginfo(build-id) = d268d53ec5750e3a54d0d40fe5a8d278c2656696 debuginfo(build-id) = d4c1e2991c3d6d368480b9c9dcc956524862928f debuginfo(build-id) = d7154285323c2971353c98956bd0db183d7fd4be debuginfo(build-id) = d8c862e85d4e62d8bc05be6e3a9d29c4cb08d2df debuginfo(build-id) = dad1ee82f6fb32effc7c89f821730cfe1fef75da debuginfo(build-id) = dbb6df83347d1f22a8cd5341d7301d9c81becfe5 debuginfo(build-id) = dc1d7e4808385ab3709c6f87178159db7179e464 debuginfo(build-id) = e0966e3b4c86549c5dfdb00205cfb546e9b88020 debuginfo(build-id) = e1c87e2b988b2eb9fc2289c33d7e24e1f5182a40 debuginfo(build-id) = ea36c125b332387195973c6fd9abf0967a17b910 debuginfo(build-id) = eff95649bba4f88b787a4c90731b31eb809a4a30 debuginfo(build-id) = f118bc3f8fbc1ca45ad9ab8a3de017056a44c2ef debuginfo(build-id) = f3f23e175e7a5c6330d3f971e383b04480eec6ea debuginfo(build-id) = f453e8577688fd60a129acb9fc0244f18adaa468 debuginfo(build-id) = f72a3bc789daa296efd300a2ddaa6a6695345ecb debuginfo(build-id) = fa004cea7347ea38c2c6ae2d6a21cf22cbaef61b debuginfo(build-id) = fe98d2786b771e8d372bbafe250e485818643550 openms-tools-debuginfo = 2.8.0-0.5.fc39 openms-tools-debuginfo(x86-64) = 2.8.0-0.5.fc39 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: openms-debugsource(x86-64) = 2.8.0-0.5.fc39 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64 Wrote: /builddir/build/RPMS/openms-tools-debuginfo-2.8.0-0.5.fc39.x86_64.rpm Wrote: /builddir/build/RPMS/openms-data-2.8.0-0.5.fc39.x86_64.rpm Wrote: /builddir/build/RPMS/openms-2.8.0-0.5.fc39.x86_64.rpm Wrote: /builddir/build/RPMS/openms-debugsource-2.8.0-0.5.fc39.x86_64.rpm Wrote: /builddir/build/RPMS/openms-doc-2.8.0-0.5.fc39.x86_64.rpm Wrote: /builddir/build/RPMS/openms-devel-2.8.0-0.5.fc39.x86_64.rpm Wrote: /builddir/build/RPMS/openms-tools-2.8.0-0.5.fc39.x86_64.rpm Wrote: /builddir/build/RPMS/openms-debuginfo-2.8.0-0.5.fc39.x86_64.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.K2MgrF + umask 022 + cd /builddir/build/BUILD + cd OpenMS-2.8.0 + /usr/bin/rm -rf /builddir/build/BUILDROOT/openms-2.8.0-0.5.fc39.x86_64 + RPM_EC=0 ++ jobs -p + exit 0 Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.PpSCNl + umask 022 + cd /builddir/build/BUILD + rm -rf OpenMS-2.8.0 OpenMS-2.8.0.gemspec + RPM_EC=0 ++ jobs -p + exit 0 RPM build warnings: %patchN is deprecated (3 usages found), use %patch N (or %patch -P N) Finish: rpmbuild openms-2.8.0-0.5.fc39.src.rpm Finish: build phase for openms-2.8.0-0.5.fc39.src.rpm INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-x86_64-1687862083.251117/root/var/log/dnf.rpm.log /var/lib/mock/fedora-rawhide-x86_64-1687862083.251117/root/var/log/dnf.librepo.log /var/lib/mock/fedora-rawhide-x86_64-1687862083.251117/root/var/log/dnf.log INFO: Done(/var/lib/copr-rpmbuild/results/openms-2.8.0-0.5.fc39.src.rpm) Config(child) 84 minutes 0 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool