Warning: Permanently added '13.221.217.27' (ED25519) to the list of known hosts. You can reproduce this build on your computer by running: sudo dnf install copr-rpmbuild /usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/11206181-fedora-43-x86_64 --chroot fedora-43-x86_64 Version: 1.10 PID: 11868 Logging PID: 11870 Task: {'allow_user_ssh': False, 'appstream': False, 'background': False, 'build_id': 11206181, 'buildroot_pkgs': [], 'chroot': 'fedora-43-x86_64', 'enable_net': False, 'fedora_review': False, 'git_hash': 'edb0d45c6f399f1795bce42eaeef0c13b9785d98', 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/mhough/biofedora/python-cobra', 'isolation': 'default', 'memory_reqs': 2048, 'package_name': 'python-cobra', 'package_version': '0.32.1-2', 'project_dirname': 'biofedora', 'project_name': 'biofedora', 'project_owner': 'mhough', 'repo_priority': None, 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/mhough/biofedora/fedora-43-x86_64/', 'id': 'copr_base', 'name': 'Copr repository', 'priority': None, 'repo_gpgcheck': False}, {'baseurl': 'https://download.copr.fedorainfracloud.org/results/mhough/neurofedora/fedora-43-x86_64/', 'id': 'copr_mhough_neurofedora', 'name': 'Additional repo copr_mhough_neurofedora', 'repo_gpgcheck': False}], 'sandbox': 'mhough/biofedora--mhough', 'source_json': {}, 'source_type': None, 'ssh_public_keys': None, 'storage': 1, 'submitter': 'mhough', 'tags': [], 'task_id': '11206181-fedora-43-x86_64', 'timeout': 18000, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/mhough/biofedora/python-cobra /var/lib/copr-rpmbuild/workspace/workdir-iaz3s42z/python-cobra --depth 500 --no-single-branch --recursive cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/mhough/biofedora/python-cobra', '/var/lib/copr-rpmbuild/workspace/workdir-iaz3s42z/python-cobra', '--depth', '500', '--no-single-branch', '--recursive'] cwd: . rc: 0 stdout: stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-iaz3s42z/python-cobra'... Running: git checkout edb0d45c6f399f1795bce42eaeef0c13b9785d98 -- cmd: ['git', 'checkout', 'edb0d45c6f399f1795bce42eaeef0c13b9785d98', '--'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-iaz3s42z/python-cobra rc: 0 stdout: stderr: Note: switching to 'edb0d45c6f399f1795bce42eaeef0c13b9785d98'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at edb0d45 automatic import of python-cobra Running: dist-git-client sources cmd: ['dist-git-client', 'sources'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-iaz3s42z/python-cobra rc: 0 stdout: stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD INFO: Reading sources specification file: sources INFO: Downloading cobrapy-0.32.1.tar.gz INFO: Reading stdout from command: curl --help all INFO: Calling: curl -H Pragma: -H 'Accept-Encoding: identity' -o cobrapy-0.32.1.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/mhough/biofedora/python-cobra/cobrapy-0.32.1.tar.gz/md5/44cdc90918ab7008e0aa0450e327cf8b/cobrapy-0.32.1.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 3.49M 100 3.49M 0 0 230.8M 0 0 INFO: Reading stdout from command: md5sum cobrapy-0.32.1.tar.gz tail: /var/lib/copr-rpmbuild/main.log: file truncated Running (timeout=18000): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-iaz3s42z/python-cobra/python-cobra.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-iaz3s42z/python-cobra --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1792953521.519929 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 6.9 starting (python version = 3.14.5, NVR = mock-6.9-1.fc44), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-iaz3s42z/python-cobra/python-cobra.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-iaz3s42z/python-cobra --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1792953521.519929 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-iaz3s42z/python-cobra/python-cobra.spec) Config(fedora-43-x86_64) Start: clean chroot Finish: clean chroot Mock Version: 6.9 INFO: Mock Version: 6.9 Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-43-x86_64-bootstrap-1792953521.519929/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: Guessed host environment type: unknown INFO: Using container image: registry.fedoraproject.org/fedora:43 INFO: Pulling image: registry.fedoraproject.org/fedora:43 INFO: Tagging container image as mock-bootstrap-28bca4a1-32e1-4b80-8669-c5100ada7e20 INFO: Checking that 79266bea435007dbfae7f364fbf41d76774ac6d5e14cc07f0fcbbc08f1aa24f9 image matches host's architecture INFO: Copy content of container 79266bea435007dbfae7f364fbf41d76774ac6d5e14cc07f0fcbbc08f1aa24f9 to /var/lib/mock/fedora-43-x86_64-bootstrap-1792953521.519929/root INFO: mounting 79266bea435007dbfae7f364fbf41d76774ac6d5e14cc07f0fcbbc08f1aa24f9 with podman image mount INFO: image 79266bea435007dbfae7f364fbf41d76774ac6d5e14cc07f0fcbbc08f1aa24f9 as /var/lib/containers/storage/overlay/104e0f310d61e4c1814a2bc73d74cf9308eb83de999a2a3cd431bbe82f697787/merged INFO: umounting image 79266bea435007dbfae7f364fbf41d76774ac6d5e14cc07f0fcbbc08f1aa24f9 (/var/lib/containers/storage/overlay/104e0f310d61e4c1814a2bc73d74cf9308eb83de999a2a3cd431bbe82f697787/merged) with podman image umount INFO: Removing image mock-bootstrap-28bca4a1-32e1-4b80-8669-c5100ada7e20 INFO: Package manager dnf5 detected and used (fallback) INFO: Not updating bootstrap chroot, bootstrap_image_ready=True Start(bootstrap): creating root cache Finish(bootstrap): creating root cache Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-43-x86_64-1792953521.519929/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf5 detected and used (direct choice) INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-6.0.2-1.fc43.x86_64 rpm-sequoia-1.10.3-1.fc43.x86_64 dnf5-5.2.18.0-5.fc43.x86_64 dnf5-plugins-5.2.18.0-5.fc43.x86_64 Start: installing minimal buildroot with dnf5 Updating and loading repositories: Additional repo copr_mhough_neurofedor 100% | 1.3 MiB/s | 876.5 KiB | 00m01s Copr repository 100% | 102.8 KiB/s | 69.3 KiB | 00m01s fedora 100% | 28.8 MiB/s | 35.7 MiB | 00m01s updates 100% | 6.7 MiB/s | 12.4 MiB | 00m02s Repositories loaded. Package Arch Version Repository Size Installing group/module packages: bash x86_64 5.3.0-2.fc43 fedora 8.4 MiB bzip2 x86_64 1.0.8-21.fc43 fedora 95.3 KiB coreutils x86_64 9.7-10.fc43 updates 5.4 MiB cpio x86_64 2.15-6.fc43 fedora 1.1 MiB diffutils x86_64 3.12-3.fc43 fedora 1.6 MiB fedora-release-common noarch 43-27 updates 20.6 KiB findutils x86_64 1:4.10.0-6.fc43 fedora 1.8 MiB gawk x86_64 5.3.2-2.fc43 fedora 1.8 MiB glibc-minimal-langpack x86_64 2.42-17.fc43 updates 0.0 B grep x86_64 3.12-2.fc43 fedora 1.0 MiB gzip x86_64 1.13-4.fc43 fedora 388.8 KiB info x86_64 7.2-7.fc43 updates 353.9 KiB patch x86_64 2.8-2.fc43 fedora 222.8 KiB redhat-rpm-config noarch 343-14.fc43 updates 182.9 KiB rpm-build x86_64 6.0.2-1.fc43 updates 286.4 KiB sed x86_64 4.9-5.fc43 fedora 857.3 KiB shadow-utils x86_64 2:4.18.0-3.fc43 fedora 3.9 MiB tar x86_64 2:1.35-6.fc43 fedora 2.9 MiB unzip x86_64 6.0-67.fc43 fedora 386.3 KiB util-linux x86_64 2.41.5-1.fc43 updates 3.5 MiB which x86_64 2.23-3.fc43 fedora 83.5 KiB xz x86_64 1:5.8.1-4.fc43 updates 1.3 MiB Installing dependencies: add-determinism x86_64 0.6.0-3.fc43 updates 2.3 MiB alternatives x86_64 1.33-3.fc43 updates 62.2 KiB ansible-srpm-macros noarch 1-18.1.fc43 fedora 35.7 KiB audit-libs x86_64 4.2.1-1.fc43 updates 382.5 KiB binutils x86_64 2.45.1-5.fc43 updates 27.3 MiB build-reproducibility-srpm-macros noarch 0.6.0-3.fc43 updates 735.0 B bzip2-libs x86_64 1.0.8-21.fc43 fedora 80.6 KiB ca-certificates noarch 2026.2.92_v9.0.319-2.fc43 updates 2.7 MiB cmake-srpm-macros noarch 3.31.11-1.fc43 updates 524.0 B coreutils-common x86_64 9.7-10.fc43 updates 11.3 MiB crypto-policies noarch 20251125-1.git63291f8.fc43 updates 147.1 KiB curl x86_64 8.15.0-12.fc43 updates 461.4 KiB cyrus-sasl-lib x86_64 2.1.28-33.fc43 fedora 2.3 MiB debugedit x86_64 5.2-3.fc43 fedora 214.0 KiB dwz x86_64 0.16-2.fc43 fedora 287.1 KiB ed x86_64 1.22.2-1.fc43 fedora 148.1 KiB efi-srpm-macros noarch 6-4.fc43 fedora 40.1 KiB elfutils x86_64 0.196-1.fc43 updates 3.1 MiB elfutils-debuginfod-client x86_64 0.196-1.fc43 updates 83.9 KiB elfutils-default-yama-scope noarch 0.196-1.fc43 updates 1.8 KiB elfutils-libelf x86_64 0.196-1.fc43 updates 1.4 MiB elfutils-libs x86_64 0.196-1.fc43 updates 695.4 KiB fedora-gpg-keys noarch 43-2 updates 259.0 KiB fedora-release noarch 43-27 updates 0.0 B fedora-release-identity-basic noarch 43-27 updates 631.0 B fedora-repos noarch 43-2 updates 4.9 KiB file x86_64 5.46-9.fc43 updates 100.2 KiB file-libs x86_64 5.46-9.fc43 updates 11.9 MiB filesystem x86_64 3.18-50.fc43 fedora 112.0 B filesystem-srpm-macros noarch 3.18-50.fc43 fedora 38.2 KiB fonts-srpm-macros noarch 1:2.0.5-23.fc43 fedora 55.8 KiB forge-srpm-macros noarch 0.4.0-3.fc43 fedora 38.9 KiB fpc-srpm-macros noarch 1.3-15.fc43 fedora 144.0 B gap-srpm-macros noarch 2-1.fc43 fedora 2.1 KiB gdb-minimal x86_64 17.2-2.fc43 updates 13.6 MiB gdbm-libs x86_64 1:1.23-10.fc43 fedora 129.9 KiB ghc-srpm-macros noarch 1.9.2-3.fc43 fedora 779.0 B glibc x86_64 2.42-17.fc43 updates 6.7 MiB glibc-common x86_64 2.42-17.fc43 updates 1.0 MiB glibc-gconv-extra x86_64 2.42-17.fc43 updates 7.2 MiB gmp x86_64 1:6.3.0-4.fc43 fedora 811.2 KiB gnat-srpm-macros noarch 7-1.fc43 updates 1.0 KiB gnome-srpm-macros noarch 1.0-1.fc43 updates 3.5 KiB gnulib-l10n noarch 20241231-1.fc43 fedora 655.0 KiB gnupg2 x86_64 2.4.9-5.fc43 updates 6.6 MiB gnupg2-dirmngr x86_64 2.4.9-5.fc43 updates 618.4 KiB gnupg2-gpg-agent x86_64 2.4.9-5.fc43 updates 671.4 KiB gnupg2-gpgconf x86_64 2.4.9-5.fc43 updates 250.0 KiB gnupg2-keyboxd x86_64 2.4.9-5.fc43 updates 201.4 KiB gnupg2-verify x86_64 2.4.9-5.fc43 updates 348.5 KiB gnutls x86_64 3.8.13-1.fc43 updates 3.8 MiB go-srpm-macros noarch 3.8.0-1.fc43 fedora 61.9 KiB gpgverify noarch 2.2-3.fc43 fedora 8.7 KiB ima-evm-utils-libs x86_64 1.6.2-6.fc43 fedora 60.7 KiB jansson x86_64 2.14-3.fc43 fedora 89.1 KiB java-srpm-macros noarch 1-7.fc43 fedora 870.0 B json-c x86_64 0.18-7.fc43 fedora 82.7 KiB kernel-srpm-macros noarch 1.0-27.fc43 fedora 1.9 KiB keyutils-libs x86_64 1.6.3-6.fc43 fedora 54.3 KiB krb5-libs x86_64 1.22.2-4.fc43 updates 2.3 MiB libacl x86_64 2.4.0-1.fc43 updates 39.9 KiB libarchive x86_64 3.8.4-1.fc43 updates 955.3 KiB libassuan x86_64 2.5.7-4.fc43 fedora 163.8 KiB libattr x86_64 2.6.0-1.fc43 updates 24.3 KiB libblkid x86_64 2.41.5-1.fc43 updates 262.3 KiB libbrotli x86_64 1.2.0-1.fc43 updates 865.4 KiB libcap x86_64 2.76-4.fc43 updates 209.1 KiB libcap-ng x86_64 0.9.6-1.fc43 updates 68.8 KiB libcom_err x86_64 1.47.3-2.fc43 fedora 63.1 KiB libcurl x86_64 8.15.0-12.fc43 updates 907.0 KiB libeconf x86_64 0.7.9-2.fc43 fedora 64.9 KiB libevent x86_64 2.1.13-1.fc43 updates 884.4 KiB libfdisk x86_64 2.41.5-1.fc43 updates 380.3 KiB libffi x86_64 3.5.2-1.fc43 updates 83.8 KiB libfsverity x86_64 1.6-3.fc43 fedora 28.5 KiB libgcc x86_64 15.3.1-1.fc43 updates 266.6 KiB libgcrypt x86_64 1.11.1-4.fc43 updates 1.6 MiB libgomp x86_64 15.3.1-1.fc43 updates 541.8 KiB libgpg-error x86_64 1.55-2.fc43 fedora 915.3 KiB libidn2 x86_64 2.3.8-2.fc43 fedora 552.5 KiB libksba x86_64 1.6.7-4.fc43 fedora 398.5 KiB liblastlog2 x86_64 2.41.5-1.fc43 updates 37.6 KiB libmount x86_64 2.41.5-1.fc43 updates 376.6 KiB libnghttp2 x86_64 1.66.0-3.fc43 updates 162.1 KiB libpfm x86_64 4.13.0-20.fc43 updates 1.7 MiB libpkgconf x86_64 2.3.0-3.fc43 fedora 78.1 KiB libpsl x86_64 0.21.5-6.fc43 fedora 76.4 KiB libselinux x86_64 3.9-5.fc43 fedora 193.1 KiB libsemanage x86_64 3.9-4.fc43 fedora 308.5 KiB libsepol x86_64 3.9-2.fc43 fedora 822.0 KiB libsmartcols x86_64 2.41.5-1.fc43 updates 180.3 KiB libssh x86_64 0.11.5-1.fc43 updates 573.1 KiB libssh-config noarch 0.11.5-1.fc43 updates 277.0 B libstdc++ x86_64 15.3.1-1.fc43 updates 2.8 MiB libtasn1 x86_64 4.21.0-1.fc43 updates 176.7 KiB libtool-ltdl x86_64 2.5.4-8.fc43 updates 70.1 KiB libunistring x86_64 1.1-10.fc43 fedora 1.7 MiB libusb1 x86_64 1.0.30-1.fc43 updates 176.0 KiB libuuid x86_64 2.41.5-1.fc43 updates 37.2 KiB libverto x86_64 0.3.2-11.fc43 fedora 25.4 KiB libxcrypt x86_64 4.5.2-1.fc43 updates 285.3 KiB libxml2 x86_64 2.12.10-5.fc43 fedora 1.7 MiB libzstd x86_64 1.5.7-2.fc43 fedora 799.9 KiB lua-libs x86_64 5.4.8-4.fc43 updates 281.9 KiB lua-srpm-macros noarch 1-16.fc43 fedora 1.3 KiB lz4-libs x86_64 1.10.0-3.fc43 fedora 161.4 KiB mpfr x86_64 4.2.2-2.fc43 fedora 832.8 KiB ncurses-base noarch 6.5-7.20250614.fc43 fedora 328.1 KiB ncurses-libs x86_64 6.5-7.20250614.fc43 fedora 946.3 KiB nettle x86_64 3.10.1-2.fc43 fedora 790.6 KiB npth x86_64 1.8-3.fc43 fedora 49.6 KiB ocaml-srpm-macros noarch 11-2.fc43 fedora 1.9 KiB openblas-srpm-macros noarch 2-20.fc43 fedora 112.0 B openldap x86_64 2.6.15-1.fc43 updates 659.2 KiB openssl-libs x86_64 1:3.5.9-1.fc43 updates 8.9 MiB p11-kit x86_64 0.26.5-1.fc43 updates 2.5 MiB p11-kit-trust x86_64 0.26.5-1.fc43 updates 466.3 KiB package-notes-srpm-macros noarch 0.20-1.fc43 updates 1.6 KiB pam-libs x86_64 1.7.1-5.fc43 updates 126.5 KiB pcre2 x86_64 10.47-1.fc43 updates 702.6 KiB pcre2-syntax noarch 10.47-1.fc43 updates 281.9 KiB perl-srpm-macros noarch 1-60.fc43 fedora 861.0 B pkgconf x86_64 2.3.0-3.fc43 fedora 88.5 KiB pkgconf-m4 noarch 2.3.0-3.fc43 fedora 14.4 KiB pkgconf-pkg-config x86_64 2.3.0-3.fc43 fedora 989.0 B popt x86_64 1.19-9.fc43 fedora 132.8 KiB publicsuffix-list-dafsa noarch 20260116-1.fc43 updates 70.4 KiB pyproject-srpm-macros noarch 1.23.2-1.fc43 updates 3.4 KiB python-srpm-macros noarch 3.14-5.fc43 fedora 51.5 KiB qt5-srpm-macros noarch 5.15.18-1.fc43 updates 500.0 B qt6-srpm-macros noarch 6.10.3-1.fc43 updates 472.0 B readline x86_64 8.3-2.fc43 fedora 511.7 KiB rpm x86_64 6.0.2-1.fc43 updates 3.1 MiB rpm-build-libs x86_64 6.0.2-1.fc43 updates 264.3 KiB rpm-libs x86_64 6.0.2-1.fc43 updates 933.5 KiB rpm-sequoia x86_64 1.10.3-1.fc43 updates 2.4 MiB rpm-sign-libs x86_64 6.0.2-1.fc43 updates 39.6 KiB rust-srpm-macros noarch 28.5-1.fc43 updates 5.5 KiB setup noarch 2.15.0-26.fc43 fedora 725.0 KiB sqlite-libs x86_64 3.50.2-3.fc43 updates 1.5 MiB systemd-libs x86_64 258.11-1.fc43 updates 2.3 MiB systemd-standalone-sysusers x86_64 258.11-1.fc43 updates 297.4 KiB tpm2-tss x86_64 4.1.3-8.fc43 fedora 1.6 MiB tree-sitter-srpm-macros noarch 0.4.2-1.fc43 fedora 8.3 KiB util-linux-core x86_64 2.41.5-1.fc43 updates 1.5 MiB xxhash-libs x86_64 0.8.4-1.fc43 updates 90.0 KiB xz-libs x86_64 1:5.8.1-4.fc43 updates 217.8 KiB zig-srpm-macros noarch 1-5.fc43 fedora 1.1 KiB zip x86_64 3.0-44.fc43 fedora 694.5 KiB zlib-ng-compat x86_64 2.3.3-2.fc43 updates 161.7 KiB zstd x86_64 1.5.7-2.fc43 fedora 1.7 MiB Installing groups: Buildsystem building group Transaction Summary: Installing: 173 packages Total size of inbound packages is 60 MiB. Need to download 60 MiB. After this operation, 203 MiB extra will be used (install 203 MiB, remove 0 B). [ 1/173] bzip2-0:1.0.8-21.fc43.x86_64 100% | 688.3 KiB/s | 51.6 KiB | 00m00s [ 2/173] cpio-0:2.15-6.fc43.x86_64 100% | 2.3 MiB/s | 293.1 KiB | 00m00s [ 3/173] bash-0:5.3.0-2.fc43.x86_64 100% | 9.7 MiB/s | 1.9 MiB | 00m00s [ 4/173] diffutils-0:3.12-3.fc43.x86_6 100% | 188.2 KiB/s | 392.3 KiB | 00m02s [ 5/173] findutils-1:4.10.0-6.fc43.x86 100% | 268.2 KiB/s | 550.0 KiB | 00m02s [ 6/173] grep-0:3.12-2.fc43.x86_64 100% | 148.7 KiB/s | 299.1 KiB | 00m02s [ 7/173] gzip-0:1.13-4.fc43.x86_64 100% | 2.9 MiB/s | 170.1 KiB | 00m00s [ 8/173] patch-0:2.8-2.fc43.x86_64 100% | 2.6 MiB/s | 113.8 KiB | 00m00s [ 9/173] sed-0:4.9-5.fc43.x86_64 100% | 10.0 MiB/s | 317.1 KiB | 00m00s [ 10/173] shadow-utils-2:4.18.0-3.fc43. 100% | 27.3 MiB/s | 1.3 MiB | 00m00s [ 11/173] tar-2:1.35-6.fc43.x86_64 100% | 17.4 MiB/s | 856.4 KiB | 00m00s [ 12/173] which-0:2.23-3.fc43.x86_64 100% | 2.7 MiB/s | 41.7 KiB | 00m00s [ 13/173] unzip-0:6.0-67.fc43.x86_64 100% | 3.9 MiB/s | 183.7 KiB | 00m00s [ 14/173] gawk-0:5.3.2-2.fc43.x86_64 100% | 33.1 MiB/s | 1.1 MiB | 00m00s [ 15/173] fedora-release-common-0:43-27 100% | 109.8 KiB/s | 22.6 KiB | 00m00s [ 16/173] glibc-minimal-langpack-0:2.42 100% | 192.3 KiB/s | 47.1 KiB | 00m00s [ 17/173] info-0:7.2-7.fc43.x86_64 100% | 1.0 MiB/s | 182.7 KiB | 00m00s [ 18/173] redhat-rpm-config-0:343-14.fc 100% | 673.7 KiB/s | 76.1 KiB | 00m00s [ 19/173] rpm-build-0:6.0.2-1.fc43.x86_ 100% | 1.9 MiB/s | 135.3 KiB | 00m00s [ 20/173] coreutils-0:9.7-10.fc43.x86_6 100% | 2.2 MiB/s | 1.1 MiB | 00m01s [ 21/173] filesystem-0:3.18-50.fc43.x86 100% | 28.4 MiB/s | 1.3 MiB | 00m00s [ 22/173] ncurses-libs-0:6.5-7.20250614 100% | 10.5 MiB/s | 332.7 KiB | 00m00s [ 23/173] xz-1:5.8.1-4.fc43.x86_64 100% | 3.8 MiB/s | 572.7 KiB | 00m00s [ 24/173] bzip2-libs-0:1.0.8-21.fc43.x8 100% | 2.8 MiB/s | 43.1 KiB | 00m00s [ 25/173] libselinux-0:3.9-5.fc43.x86_6 100% | 3.2 MiB/s | 97.7 KiB | 00m00s [ 26/173] util-linux-0:2.41.5-1.fc43.x8 100% | 4.8 MiB/s | 1.2 MiB | 00m00s [ 27/173] 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00m00s [130/173] qt6-srpm-macros-0:6.10.3-1.fc 100% | 169.2 KiB/s | 9.1 KiB | 00m00s [131/173] rust-srpm-macros-0:28.5-1.fc4 100% | 219.5 KiB/s | 11.2 KiB | 00m00s [132/173] libgcrypt-0:1.11.1-4.fc43.x86 100% | 9.5 MiB/s | 596.0 KiB | 00m00s [133/173] gnutls-0:3.8.13-1.fc43.x86_64 100% | 23.1 MiB/s | 1.4 MiB | 00m00s [134/173] libidn2-0:2.3.8-2.fc43.x86_64 100% | 5.5 MiB/s | 174.9 KiB | 00m00s [135/173] libunistring-0:1.1-10.fc43.x8 100% | 16.1 MiB/s | 542.9 KiB | 00m00s [136/173] nettle-0:3.10.1-2.fc43.x86_64 100% | 12.6 MiB/s | 424.2 KiB | 00m00s [137/173] openssl-libs-1:3.5.9-1.fc43.x 100% | 18.4 MiB/s | 2.6 MiB | 00m00s [138/173] gdbm-libs-1:1.23-10.fc43.x86_ 100% | 1.9 MiB/s | 56.8 KiB | 00m00s [139/173] openldap-0:2.6.15-1.fc43.x86_ 100% | 4.4 MiB/s | 259.7 KiB | 00m00s [140/173] cyrus-sasl-lib-0:2.1.28-33.fc 100% | 15.4 MiB/s | 787.9 KiB | 00m00s [141/173] fedora-repos-0:43-2.noarch 100% | 177.6 KiB/s | 8.9 KiB | 00m00s [142/173] fedora-gpg-keys-0:43-2.noarch 100% | 3.2 MiB/s | 184.2 KiB | 00m00s [143/173] elfutils-default-yama-scope-0 100% | 222.2 KiB/s | 11.3 KiB | 00m00s [144/173] libpfm-0:4.13.0-20.fc43.x86_6 100% | 4.2 MiB/s | 225.4 KiB | 00m00s [145/173] libattr-0:2.6.0-1.fc43.x86_64 100% | 330.6 KiB/s | 17.9 KiB | 00m00s [146/173] alternatives-0:1.33-3.fc43.x8 100% | 781.2 KiB/s | 40.6 KiB | 00m00s [147/173] libusb1-0:1.0.30-1.fc43.x86_6 100% | 1.5 MiB/s | 80.5 KiB | 00m00s [148/173] pcre2-syntax-0:10.47-1.fc43.n 100% | 3.0 MiB/s | 164.7 KiB | 00m00s [149/173] pcre2-0:10.47-1.fc43.x86_64 100% | 4.6 MiB/s | 267.2 KiB | 00m00s [150/173] ca-certificates-0:2026.2.92_v 100% | 15.7 MiB/s | 980.2 KiB | 00m00s [151/173] crypto-policies-0:20251125-1. 100% | 1.8 MiB/s | 97.8 KiB | 00m00s [152/173] libevent-0:2.1.13-1.fc43.x86_ 100% | 4.4 MiB/s | 259.5 KiB | 00m00s [153/173] libtool-ltdl-0:2.5.4-8.fc43.x 100% | 725.0 KiB/s | 36.2 KiB | 00m00s [154/173] libtasn1-0:4.21.0-1.fc43.x86_ 100% | 1.4 MiB/s | 74.5 KiB | 00m00s [155/173] p11-kit-0:0.26.5-1.fc43.x86_6 100% | 8.7 MiB/s | 542.8 KiB | 00m00s [156/173] p11-kit-trust-0:0.26.5-1.fc43 100% | 2.7 MiB/s | 140.6 KiB | 00m00s [157/173] libffi-0:3.5.2-1.fc43.x86_64 100% | 805.1 KiB/s | 41.1 KiB | 00m00s [158/173] systemd-standalone-sysusers-0 100% | 2.7 MiB/s | 149.4 KiB | 00m00s [159/173] xxhash-libs-0:0.8.4-1.fc43.x8 100% | 756.1 KiB/s | 38.6 KiB | 00m00s [160/173] fedora-release-0:43-27.noarch 100% | 213.8 KiB/s | 11.5 KiB | 00m00s [161/173] gdb-minimal-0:17.2-2.fc43.x86 100% | 42.6 MiB/s | 4.5 MiB | 00m00s [162/173] fedora-release-identity-basic 100% | 241.4 KiB/s | 12.3 KiB | 00m00s [163/173] libcurl-0:8.15.0-12.fc43.x86_ 100% | 6.7 MiB/s | 403.9 KiB | 00m00s [164/173] libpsl-0:0.21.5-6.fc43.x86_64 100% | 1.0 MiB/s | 65.0 KiB | 00m00s [165/173] libssh-0:0.11.5-1.fc43.x86_64 100% | 4.5 MiB/s | 234.6 KiB | 00m00s [166/173] libssh-config-0:0.11.5-1.fc43 100% | 165.6 KiB/s | 8.9 KiB | 00m00s [167/173] keyutils-libs-0:1.6.3-6.fc43. 100% | 2.0 MiB/s | 31.4 KiB | 00m00s [168/173] publicsuffix-list-dafsa-0:202 100% | 1.1 MiB/s | 60.3 KiB | 00m00s [169/173] krb5-libs-0:1.22.2-4.fc43.x86 100% | 12.8 MiB/s | 770.4 KiB | 00m00s [170/173] libcom_err-0:1.47.3-2.fc43.x8 100% | 1.7 MiB/s | 26.8 KiB | 00m00s [171/173] libverto-0:0.3.2-11.fc43.x86_ 100% | 1.3 MiB/s | 20.7 KiB | 00m00s [172/173] libnghttp2-0:1.66.0-3.fc43.x8 100% | 1.4 MiB/s | 71.0 KiB | 00m00s [173/173] libbrotli-0:1.2.0-1.fc43.x86_ 100% | 5.9 MiB/s | 349.3 KiB | 00m00s -------------------------------------------------------------------------------- [173/173] Total 100% | 11.4 MiB/s | 59.7 MiB | 00m05s Running transaction Importing OpenPGP key 0x31645531: UserID : "Fedora (43) " Fingerprint: C6E7F081CF80E13146676E88829B606631645531 From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-43-primary The key was successfully imported. [ 1/175] Verify package files 100% | 839.0 B/s | 173.0 B | 00m00s [ 2/175] Prepare transaction 100% | 4.7 KiB/s | 173.0 B | 00m00s [ 3/175] Installing libgcc-0:15.3.1-1. 100% | 262.0 MiB/s | 268.3 KiB | 00m00s [ 4/175] Installing publicsuffix-list- 100% | 0.0 B/s | 71.1 KiB | 00m00s [ 5/175] Installing libssh-config-0:0. 100% | 0.0 B/s | 816.0 B | 00m00s [ 6/175] Installing fedora-release-ide 100% | 867.2 KiB/s | 888.0 B | 00m00s [ 7/175] Installing fedora-gpg-keys-0: 100% | 57.8 MiB/s | 355.0 KiB | 00m00s [ 8/175] Installing fedora-repos-0:43- 100% | 0.0 B/s | 5.7 KiB | 00m00s [ 9/175] Installing fedora-release-com 100% | 24.3 MiB/s | 24.8 KiB | 00m00s [ 10/175] Installing fedora-release-0:4 100% | 15.1 KiB/s | 124.0 B | 00m00s >>> Running sysusers scriptlet: setup-0:2.15.0-26.fc43.noarch >>> Finished sysusers scriptlet: setup-0:2.15.0-26.fc43.noarch >>> Scriptlet output: >>> Creating group 'adm' with GID 4. >>> Creating group 'audio' with GID 63. >>> Creating group 'cdrom' with GID 11. >>> Creating group 'clock' with GID 103. >>> Creating group 'dialout' with GID 18. >>> Creating group 'disk' with GID 6. >>> Creating group 'floppy' with GID 19. >>> Creating group 'ftp' with GID 50. >>> Creating group 'games' with GID 20. >>> Creating group 'input' with GID 104. >>> Creating group 'kmem' with GID 9. >>> Creating group 'kvm' with GID 36. >>> Creating group 'lock' with GID 54. >>> Creating group 'lp' with GID 7. >>> Creating group 'mail' with GID 12. >>> Creating group 'man' with GID 15. >>> Creating group 'mem' with GID 8. >>> Creating group 'nobody' with GID 65534. >>> Creating group 'render' with GID 105. >>> Creating group 'root' with GID 0. >>> Creating group 'sgx' with GID 106. >>> Creating group 'sys' with GID 3. >>> Creating group 'tape' with GID 33. >>> Creating group 'tty' with GID 5. >>> Creating group 'users' with GID 100. >>> Creating group 'utmp' with GID 22. >>> Creating group 'video' with GID 39. >>> Creating group 'wheel' with GID 10. >>> Creating user 'adm' (adm) with UID 3 and GID 4. >>> Creating group 'bin' with GID 1. >>> Creating user 'bin' (bin) with UID 1 and GID 1. >>> Creating group 'daemon' with GID 2. >>> Creating user 'daemon' (daemon) with UID 2 and GID 2. >>> Creating user 'ftp' (FTP User) with UID 14 and GID 50. >>> Creating user 'games' (games) with UID 12 and GID 100. >>> Creating user 'halt' (halt) with UID 7 and GID 0. >>> Creating user 'lp' (lp) with UID 4 and GID 7. >>> Creating user 'mail' (mail) with UID 8 and GID 12. >>> Creating user 'nobody' (Kernel Overflow User) with UID 65534 and GID 65534. >>> Creating user 'operator' (operator) with UID 11 and GID 0. >>> Creating user 'root' (Super User) with UID 0 and GID 0. >>> Creating user 'shutdown' (shutdown) with UID 6 and GID 0. >>> Creating user 'sync' (sync) with UID 5 and GID 0. >>> [ 11/175] Installing setup-0:2.15.0-26. 100% | 54.9 MiB/s | 730.6 KiB | 00m00s >>> [RPM] /etc/hosts created as /etc/hosts.rpmnew [ 12/175] Installing filesystem-0:3.18- 100% | 3.4 MiB/s | 212.8 KiB | 00m00s [ 13/175] Installing pcre2-syntax-0:10. 100% | 277.7 MiB/s | 284.3 KiB | 00m00s [ 14/175] Installing rust-srpm-macros-0 100% | 0.0 B/s | 6.4 KiB | 00m00s [ 15/175] Installing qt6-srpm-macros-0: 100% | 0.0 B/s | 748.0 B | 00m00s [ 16/175] Installing qt5-srpm-macros-0: 100% | 0.0 B/s | 776.0 B | 00m00s [ 17/175] Installing package-notes-srpm 100% | 0.0 B/s | 2.1 KiB | 00m00s [ 18/175] Installing gnat-srpm-macros-0 100% | 0.0 B/s | 1.3 KiB | 00m00s [ 19/175] Installing pkgconf-m4-0:2.3.0 100% | 0.0 B/s | 14.8 KiB | 00m00s [ 20/175] Installing gnulib-l10n-0:2024 100% | 215.5 MiB/s | 661.9 KiB | 00m00s [ 21/175] Installing coreutils-common-0 100% | 451.7 MiB/s | 11.3 MiB | 00m00s [ 22/175] Installing ncurses-base-0:6.5 100% | 115.1 MiB/s | 353.5 KiB | 00m00s [ 23/175] Installing bash-0:5.3.0-2.fc4 100% | 301.1 MiB/s | 8.4 MiB | 00m00s [ 24/175] Installing glibc-common-0:2.4 100% | 72.8 MiB/s | 1.0 MiB | 00m00s [ 25/175] Installing glibc-gconv-extra- 100% | 330.9 MiB/s | 7.3 MiB | 00m00s [ 26/175] Installing glibc-0:2.42-17.fc 100% | 209.1 MiB/s | 6.7 MiB | 00m00s [ 27/175] Installing ncurses-libs-0:6.5 100% | 310.1 MiB/s | 952.8 KiB | 00m00s [ 28/175] Installing glibc-minimal-lang 100% | 0.0 B/s | 124.0 B | 00m00s [ 29/175] Installing zlib-ng-compat-0:2 100% | 158.7 MiB/s | 162.6 KiB | 00m00s [ 30/175] Installing bzip2-libs-0:1.0.8 100% | 0.0 B/s | 81.7 KiB | 00m00s [ 31/175] Installing libgpg-error-0:1.5 100% | 69.2 MiB/s | 921.1 KiB | 00m00s [ 32/175] Installing libstdc++-0:15.3.1 100% | 474.8 MiB/s | 2.8 MiB | 00m00s [ 33/175] Installing xz-libs-1:5.8.1-4. 100% | 213.8 MiB/s | 218.9 KiB | 00m00s [ 34/175] Installing libassuan-0:2.5.7- 100% | 161.7 MiB/s | 165.6 KiB | 00m00s [ 35/175] Installing libgcrypt-0:1.11.1 100% | 393.7 MiB/s | 1.6 MiB | 00m00s [ 36/175] Installing readline-0:8.3-2.f 100% | 501.8 MiB/s | 513.9 KiB | 00m00s [ 37/175] Installing gmp-1:6.3.0-4.fc43 100% | 397.2 MiB/s | 813.5 KiB | 00m00s [ 38/175] Installing libuuid-0:2.41.5-1 100% | 0.0 B/s | 38.4 KiB | 00m00s [ 39/175] Installing libacl-0:2.4.0-1.f 100% | 0.0 B/s | 40.7 KiB | 00m00s [ 40/175] Installing popt-0:1.19-9.fc43 100% | 68.1 MiB/s | 139.4 KiB | 00m00s [ 41/175] Installing libzstd-0:1.5.7-2. 100% | 391.2 MiB/s | 801.1 KiB | 00m00s [ 42/175] Installing elfutils-libelf-0: 100% | 479.6 MiB/s | 1.4 MiB | 00m00s [ 43/175] Installing npth-0:1.8-3.fc43. 100% | 0.0 B/s | 50.7 KiB | 00m00s [ 44/175] Installing libblkid-0:2.41.5- 100% | 257.3 MiB/s | 263.4 KiB | 00m00s [ 45/175] Installing libxcrypt-0:4.5.2- 100% | 281.3 MiB/s | 288.0 KiB | 00m00s [ 46/175] Installing sqlite-libs-0:3.50 100% | 379.1 MiB/s | 1.5 MiB | 00m00s [ 47/175] Installing gnupg2-gpgconf-0:2 100% | 22.4 MiB/s | 252.1 KiB | 00m00s [ 48/175] Installing json-c-0:0.18-7.fc 100% | 0.0 B/s | 84.0 KiB | 00m00s [ 49/175] Installing libunistring-0:1.1 100% | 431.7 MiB/s | 1.7 MiB | 00m00s [ 50/175] Installing libidn2-0:2.3.8-2. 100% | 272.8 MiB/s | 558.7 KiB | 00m00s [ 51/175] Installing libtasn1-0:4.21.0- 100% | 21.8 MiB/s | 178.6 KiB | 00m00s [ 52/175] Installing crypto-policies-0: 100% | 56.1 MiB/s | 172.2 KiB | 00m00s [ 53/175] Installing gnupg2-verify-0:2. 100% | 28.5 MiB/s | 349.9 KiB | 00m00s [ 54/175] Installing dwz-0:0.16-2.fc43. 100% | 25.6 MiB/s | 288.5 KiB | 00m00s [ 55/175] Installing mpfr-0:4.2.2-2.fc4 100% | 407.4 MiB/s | 834.4 KiB | 00m00s [ 56/175] Installing gawk-0:5.3.2-2.fc4 100% | 113.5 MiB/s | 1.8 MiB | 00m00s [ 57/175] Installing libksba-0:1.6.7-4. 100% | 391.7 MiB/s | 401.1 KiB | 00m00s [ 58/175] Installing unzip-0:6.0-67.fc4 100% | 34.6 MiB/s | 389.8 KiB | 00m00s [ 59/175] Installing file-libs-0:5.46-9 100% | 741.3 MiB/s | 11.9 MiB | 00m00s [ 60/175] Installing file-0:5.46-9.fc43 100% | 9.0 MiB/s | 101.7 KiB | 00m00s [ 61/175] Installing libeconf-0:0.7.9-2 100% | 0.0 B/s | 66.5 KiB | 00m00s [ 62/175] Installing libsepol-0:3.9-2.f 100% | 401.8 MiB/s | 822.9 KiB | 00m00s [ 63/175] Installing lz4-libs-0:1.10.0- 100% | 158.6 MiB/s | 162.5 KiB | 00m00s [ 64/175] Installing libsmartcols-0:2.4 100% | 177.2 MiB/s | 181.5 KiB | 00m00s [ 65/175] Installing libcap-ng-0:0.9.6- 100% | 0.0 B/s | 70.6 KiB | 00m00s [ 66/175] Installing audit-libs-0:4.2.1 100% | 375.9 MiB/s | 384.9 KiB | 00m00s [ 67/175] Installing pam-libs-0:1.7.1-5 100% | 125.7 MiB/s | 128.8 KiB | 00m00s [ 68/175] Installing libcap-0:2.76-4.fc 100% | 19.0 MiB/s | 214.3 KiB | 00m00s [ 69/175] Installing systemd-libs-0:258 100% | 391.3 MiB/s | 2.3 MiB | 00m00s [ 70/175] Installing lua-libs-0:5.4.8-4 100% | 276.7 MiB/s | 283.3 KiB | 00m00s [ 71/175] Installing libattr-0:2.6.0-1. 100% | 0.0 B/s | 25.2 KiB | 00m00s [ 72/175] Installing alternatives-0:1.3 100% | 6.2 MiB/s | 63.8 KiB | 00m00s [ 73/175] Installing pcre2-0:10.47-1.fc 100% | 343.8 MiB/s | 704.1 KiB | 00m00s [ 74/175] Installing libselinux-0:3.9-5 100% | 189.8 MiB/s | 194.4 KiB | 00m00s [ 75/175] Installing grep-0:3.12-2.fc43 100% | 71.6 MiB/s | 1.0 MiB | 00m00s [ 76/175] Installing findutils-1:4.10.0 100% | 123.9 MiB/s | 1.9 MiB | 00m00s [ 77/175] Installing sed-0:4.9-5.fc43.x 100% | 65.0 MiB/s | 865.5 KiB | 00m00s [ 78/175] Installing xz-1:5.8.1-4.fc43. 100% | 88.8 MiB/s | 1.3 MiB | 00m00s [ 79/175] Installing libmount-0:2.41.5- 100% | 368.9 MiB/s | 377.7 KiB | 00m00s [ 80/175] Installing libffi-0:3.5.2-1.f 100% | 83.2 MiB/s | 85.2 KiB | 00m00s [ 81/175] Installing p11-kit-0:0.26.5-1 100% | 149.7 MiB/s | 2.5 MiB | 00m00s [ 82/175] Installing p11-kit-trust-0:0. 100% | 24.0 MiB/s | 467.9 KiB | 00m00s [ 83/175] Installing openssl-libs-1:3.5 100% | 406.5 MiB/s | 8.9 MiB | 00m00s [ 84/175] Installing coreutils-0:9.7-10 100% | 181.0 MiB/s | 5.4 MiB | 00m00s [ 85/175] Installing ca-certificates-0: 100% | 2.6 MiB/s | 2.5 MiB | 00m01s [ 86/175] Installing gzip-0:1.13-4.fc43 100% | 32.1 MiB/s | 394.4 KiB | 00m00s [ 87/175] Installing libfsverity-0:1.6- 100% | 0.0 B/s | 29.5 KiB | 00m00s [ 88/175] Installing rpm-sequoia-0:1.10 100% | 408.5 MiB/s | 2.5 MiB | 00m00s [ 89/175] Installing libevent-0:2.1.13- 100% | 289.1 MiB/s | 888.2 KiB | 00m00s [ 90/175] Installing util-linux-core-0: 100% | 92.2 MiB/s | 1.5 MiB | 00m00s [ 91/175] Installing tar-2:1.35-6.fc43. 100% | 174.0 MiB/s | 3.0 MiB | 00m00s [ 92/175] Installing libsemanage-0:3.9- 100% | 303.0 MiB/s | 310.2 KiB | 00m00s [ 93/175] Installing systemd-standalone 100% | 26.5 MiB/s | 298.1 KiB | 00m00s [ 94/175] Installing rpm-libs-0:6.0.2-1 100% | 304.4 MiB/s | 935.1 KiB | 00m00s [ 95/175] Installing libusb1-0:1.0.30-1 100% | 21.7 MiB/s | 177.7 KiB | 00m00s >>> Running sysusers scriptlet: tpm2-tss-0:4.1.3-8.fc43.x86_64 >>> Finished sysusers scriptlet: tpm2-tss-0:4.1.3-8.fc43.x86_64 >>> Scriptlet output: >>> Creating group 'tss' with GID 59. >>> Creating user 'tss' (Account used for TPM access) with UID 59 and GID 59. >>> [ 96/175] Installing tpm2-tss-0:4.1.3-8 100% | 314.4 MiB/s | 1.6 MiB | 00m00s [ 97/175] Installing ima-evm-utils-libs 100% | 0.0 B/s | 62.0 KiB | 00m00s [ 98/175] Installing gnupg2-gpg-agent-0 100% | 34.7 MiB/s | 675.4 KiB | 00m00s [ 99/175] Installing liblastlog2-0:2.41 100% | 7.7 MiB/s | 39.5 KiB | 00m00s [100/175] Installing zstd-0:1.5.7-2.fc4 100% | 114.0 MiB/s | 1.7 MiB | 00m00s [101/175] Installing zip-0:3.0-44.fc43. 100% | 56.8 MiB/s | 698.4 KiB | 00m00s [102/175] Installing gnupg2-keyboxd-0:2 100% | 33.0 MiB/s | 202.7 KiB | 00m00s [103/175] Installing libpsl-0:0.21.5-6. 100% | 75.7 MiB/s | 77.5 KiB | 00m00s [104/175] Installing libfdisk-0:2.41.5- 100% | 372.5 MiB/s | 381.4 KiB | 00m00s [105/175] Installing nettle-0:3.10.1-2. 100% | 387.5 MiB/s | 793.7 KiB | 00m00s [106/175] Installing gnutls-0:3.8.13-1. 100% | 418.6 MiB/s | 3.8 MiB | 00m00s [107/175] Installing libxml2-0:2.12.10- 100% | 106.5 MiB/s | 1.7 MiB | 00m00s [108/175] Installing libarchive-0:3.8.4 100% | 311.6 MiB/s | 957.2 KiB | 00m00s [109/175] Installing bzip2-0:1.0.8-21.f 100% | 8.9 MiB/s | 99.8 KiB | 00m00s [110/175] Installing add-determinism-0: 100% | 153.5 MiB/s | 2.3 MiB | 00m00s [111/175] Installing build-reproducibil 100% | 0.0 B/s | 1.0 KiB | 00m00s [112/175] Installing cpio-0:2.15-6.fc43 100% | 84.6 MiB/s | 1.1 MiB | 00m00s [113/175] Installing diffutils-0:3.12-3 100% | 104.1 MiB/s | 1.6 MiB | 00m00s [114/175] Installing ed-0:1.22.2-1.fc43 100% | 13.3 MiB/s | 150.4 KiB | 00m00s [115/175] Installing patch-0:2.8-2.fc43 100% | 19.9 MiB/s | 224.3 KiB | 00m00s [116/175] Installing libgomp-0:15.3.1-1 100% | 530.4 MiB/s | 543.2 KiB | 00m00s [117/175] Installing jansson-0:2.14-3.f 100% | 0.0 B/s | 90.5 KiB | 00m00s [118/175] Installing libpkgconf-0:2.3.0 100% | 0.0 B/s | 79.2 KiB | 00m00s [119/175] Installing pkgconf-0:2.3.0-3. 100% | 8.1 MiB/s | 91.0 KiB | 00m00s [120/175] Installing pkgconf-pkg-config 100% | 177.3 KiB/s | 1.8 KiB | 00m00s [121/175] Installing gdbm-libs-1:1.23-1 100% | 128.5 MiB/s | 131.6 KiB | 00m00s [122/175] Installing cyrus-sasl-lib-0:2 100% | 153.1 MiB/s | 2.3 MiB | 00m00s [123/175] Installing libpfm-0:4.13.0-20 100% | 573.5 MiB/s | 1.7 MiB | 00m00s [124/175] Installing libtool-ltdl-0:2.5 100% | 0.0 B/s | 71.2 KiB | 00m00s [125/175] Installing openldap-0:2.6.15- 100% | 323.7 MiB/s | 663.0 KiB | 00m00s [126/175] Installing gnupg2-dirmngr-0:2 100% | 33.7 MiB/s | 621.1 KiB | 00m00s [127/175] Installing gnupg2-0:2.4.9-5.f 100% | 252.5 MiB/s | 6.6 MiB | 00m00s [128/175] Installing rpm-sign-libs-0:6. 100% | 0.0 B/s | 40.5 KiB | 00m00s [129/175] Installing gpgverify-0:2.2-3. 100% | 0.0 B/s | 9.4 KiB | 00m00s [130/175] Installing xxhash-libs-0:0.8. 100% | 89.2 MiB/s | 91.4 KiB | 00m00s [131/175] Installing keyutils-libs-0:1. 100% | 0.0 B/s | 55.7 KiB | 00m00s [132/175] Installing libcom_err-0:1.47. 100% | 0.0 B/s | 64.2 KiB | 00m00s [133/175] Installing libverto-0:0.3.2-1 100% | 26.6 MiB/s | 27.2 KiB | 00m00s [134/175] Installing krb5-libs-0:1.22.2 100% | 388.7 MiB/s | 2.3 MiB | 00m00s [135/175] Installing libssh-0:0.11.5-1. 100% | 280.8 MiB/s | 575.1 KiB | 00m00s [136/175] Installing libbrotli-0:1.2.0- 100% | 423.7 MiB/s | 867.7 KiB | 00m00s [137/175] Installing libnghttp2-0:1.66. 100% | 159.4 MiB/s | 163.2 KiB | 00m00s [138/175] Installing libcurl-0:8.15.0-1 100% | 443.4 MiB/s | 908.1 KiB | 00m00s [139/175] Installing curl-0:8.15.0-12.f 100% | 22.7 MiB/s | 463.9 KiB | 00m00s [140/175] Installing rpm-0:6.0.2-1.fc43 100% | 92.0 MiB/s | 2.6 MiB | 00m00s [141/175] Installing efi-srpm-macros-0: 100% | 40.2 MiB/s | 41.1 KiB | 00m00s [142/175] Installing java-srpm-macros-0 100% | 0.0 B/s | 1.1 KiB | 00m00s [143/175] Installing lua-srpm-macros-0: 100% | 0.0 B/s | 1.9 KiB | 00m00s [144/175] Installing tree-sitter-srpm-m 100% | 0.0 B/s | 9.3 KiB | 00m00s [145/175] Installing zig-srpm-macros-0: 100% | 0.0 B/s | 1.7 KiB | 00m00s [146/175] Installing cmake-srpm-macros- 100% | 0.0 B/s | 804.0 B | 00m00s [147/175] Installing filesystem-srpm-ma 100% | 0.0 B/s | 38.9 KiB | 00m00s [148/175] Installing elfutils-default-y 100% | 408.6 KiB/s | 2.0 KiB | 00m00s [149/175] Installing elfutils-libs-0:0. 100% | 340.4 MiB/s | 697.2 KiB | 00m00s [150/175] Installing elfutils-debuginfo 100% | 7.0 MiB/s | 86.2 KiB | 00m00s [151/175] Installing elfutils-0:0.196-1 100% | 172.8 MiB/s | 3.1 MiB | 00m00s [152/175] Installing binutils-0:2.45.1- 100% | 370.0 MiB/s | 27.4 MiB | 00m00s [153/175] Installing gdb-minimal-0:17.2 100% | 324.3 MiB/s | 13.6 MiB | 00m00s [154/175] Installing debugedit-0:5.2-3. 100% | 17.7 MiB/s | 217.3 KiB | 00m00s [155/175] Installing rpm-build-libs-0:6 100% | 258.9 MiB/s | 265.1 KiB | 00m00s [156/175] Installing gnome-srpm-macros- 100% | 0.0 B/s | 4.1 KiB | 00m00s [157/175] Installing perl-srpm-macros-0 100% | 0.0 B/s | 1.1 KiB | 00m00s [158/175] Installing openblas-srpm-macr 100% | 0.0 B/s | 392.0 B | 00m00s [159/175] Installing ocaml-srpm-macros- 100% | 0.0 B/s | 2.1 KiB | 00m00s [160/175] Installing kernel-srpm-macros 100% | 0.0 B/s | 2.3 KiB | 00m00s [161/175] Installing ghc-srpm-macros-0: 100% | 0.0 B/s | 1.0 KiB | 00m00s [162/175] Installing gap-srpm-macros-0: 100% | 0.0 B/s | 2.7 KiB | 00m00s [163/175] Installing fpc-srpm-macros-0: 100% | 0.0 B/s | 420.0 B | 00m00s [164/175] Installing ansible-srpm-macro 100% | 0.0 B/s | 36.2 KiB | 00m00s [165/175] Installing rpm-build-0:6.0.2- 100% | 24.1 MiB/s | 295.6 KiB | 00m00s [166/175] Installing pyproject-srpm-mac 100% | 0.0 B/s | 4.0 KiB | 00m00s [167/175] Installing redhat-rpm-config- 100% | 184.7 MiB/s | 189.1 KiB | 00m00s [168/175] Installing forge-srpm-macros- 100% | 0.0 B/s | 40.3 KiB | 00m00s [169/175] Installing fonts-srpm-macros- 100% | 0.0 B/s | 57.0 KiB | 00m00s [170/175] Installing go-srpm-macros-0:3 100% | 0.0 B/s | 63.0 KiB | 00m00s [171/175] Installing python-srpm-macros 100% | 51.6 MiB/s | 52.8 KiB | 00m00s [172/175] Installing util-linux-0:2.41. 100% | 111.4 MiB/s | 3.6 MiB | 00m00s [173/175] Installing shadow-utils-2:4.1 100% | 158.8 MiB/s | 4.0 MiB | 00m00s [174/175] Installing which-0:2.23-3.fc4 100% | 7.6 MiB/s | 85.7 KiB | 00m00s [175/175] Installing info-0:7.2-7.fc43. 100% | 280.5 KiB/s | 354.3 KiB | 00m01s Complete! Finish: installing minimal buildroot with dnf5 Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: add-determinism-0.6.0-3.fc43.x86_64 alternatives-1.33-3.fc43.x86_64 ansible-srpm-macros-1-18.1.fc43.noarch audit-libs-4.2.1-1.fc43.x86_64 bash-5.3.0-2.fc43.x86_64 binutils-2.45.1-5.fc43.x86_64 build-reproducibility-srpm-macros-0.6.0-3.fc43.noarch bzip2-1.0.8-21.fc43.x86_64 bzip2-libs-1.0.8-21.fc43.x86_64 ca-certificates-2026.2.92_v9.0.319-2.fc43.noarch cmake-srpm-macros-3.31.11-1.fc43.noarch coreutils-9.7-10.fc43.x86_64 coreutils-common-9.7-10.fc43.x86_64 cpio-2.15-6.fc43.x86_64 crypto-policies-20251125-1.git63291f8.fc43.noarch curl-8.15.0-12.fc43.x86_64 cyrus-sasl-lib-2.1.28-33.fc43.x86_64 debugedit-5.2-3.fc43.x86_64 diffutils-3.12-3.fc43.x86_64 dwz-0.16-2.fc43.x86_64 ed-1.22.2-1.fc43.x86_64 efi-srpm-macros-6-4.fc43.noarch elfutils-0.196-1.fc43.x86_64 elfutils-debuginfod-client-0.196-1.fc43.x86_64 elfutils-default-yama-scope-0.196-1.fc43.noarch elfutils-libelf-0.196-1.fc43.x86_64 elfutils-libs-0.196-1.fc43.x86_64 fedora-gpg-keys-43-2.noarch fedora-release-43-27.noarch fedora-release-common-43-27.noarch fedora-release-identity-basic-43-27.noarch fedora-repos-43-2.noarch file-5.46-9.fc43.x86_64 file-libs-5.46-9.fc43.x86_64 filesystem-3.18-50.fc43.x86_64 filesystem-srpm-macros-3.18-50.fc43.noarch findutils-4.10.0-6.fc43.x86_64 fonts-srpm-macros-2.0.5-23.fc43.noarch forge-srpm-macros-0.4.0-3.fc43.noarch fpc-srpm-macros-1.3-15.fc43.noarch gap-srpm-macros-2-1.fc43.noarch gawk-5.3.2-2.fc43.x86_64 gdb-minimal-17.2-2.fc43.x86_64 gdbm-libs-1.23-10.fc43.x86_64 ghc-srpm-macros-1.9.2-3.fc43.noarch glibc-2.42-17.fc43.x86_64 glibc-common-2.42-17.fc43.x86_64 glibc-gconv-extra-2.42-17.fc43.x86_64 glibc-minimal-langpack-2.42-17.fc43.x86_64 gmp-6.3.0-4.fc43.x86_64 gnat-srpm-macros-7-1.fc43.noarch gnome-srpm-macros-1.0-1.fc43.noarch gnulib-l10n-20241231-1.fc43.noarch gnupg2-2.4.9-5.fc43.x86_64 gnupg2-dirmngr-2.4.9-5.fc43.x86_64 gnupg2-gpg-agent-2.4.9-5.fc43.x86_64 gnupg2-gpgconf-2.4.9-5.fc43.x86_64 gnupg2-keyboxd-2.4.9-5.fc43.x86_64 gnupg2-verify-2.4.9-5.fc43.x86_64 gnutls-3.8.13-1.fc43.x86_64 go-srpm-macros-3.8.0-1.fc43.noarch gpg-pubkey-c6e7f081cf80e13146676e88829b606631645531-66b6dccf gpgverify-2.2-3.fc43.noarch grep-3.12-2.fc43.x86_64 gzip-1.13-4.fc43.x86_64 ima-evm-utils-libs-1.6.2-6.fc43.x86_64 info-7.2-7.fc43.x86_64 jansson-2.14-3.fc43.x86_64 java-srpm-macros-1-7.fc43.noarch json-c-0.18-7.fc43.x86_64 kernel-srpm-macros-1.0-27.fc43.noarch keyutils-libs-1.6.3-6.fc43.x86_64 krb5-libs-1.22.2-4.fc43.x86_64 libacl-2.4.0-1.fc43.x86_64 libarchive-3.8.4-1.fc43.x86_64 libassuan-2.5.7-4.fc43.x86_64 libattr-2.6.0-1.fc43.x86_64 libblkid-2.41.5-1.fc43.x86_64 libbrotli-1.2.0-1.fc43.x86_64 libcap-2.76-4.fc43.x86_64 libcap-ng-0.9.6-1.fc43.x86_64 libcom_err-1.47.3-2.fc43.x86_64 libcurl-8.15.0-12.fc43.x86_64 libeconf-0.7.9-2.fc43.x86_64 libevent-2.1.13-1.fc43.x86_64 libfdisk-2.41.5-1.fc43.x86_64 libffi-3.5.2-1.fc43.x86_64 libfsverity-1.6-3.fc43.x86_64 libgcc-15.3.1-1.fc43.x86_64 libgcrypt-1.11.1-4.fc43.x86_64 libgomp-15.3.1-1.fc43.x86_64 libgpg-error-1.55-2.fc43.x86_64 libidn2-2.3.8-2.fc43.x86_64 libksba-1.6.7-4.fc43.x86_64 liblastlog2-2.41.5-1.fc43.x86_64 libmount-2.41.5-1.fc43.x86_64 libnghttp2-1.66.0-3.fc43.x86_64 libpfm-4.13.0-20.fc43.x86_64 libpkgconf-2.3.0-3.fc43.x86_64 libpsl-0.21.5-6.fc43.x86_64 libselinux-3.9-5.fc43.x86_64 libsemanage-3.9-4.fc43.x86_64 libsepol-3.9-2.fc43.x86_64 libsmartcols-2.41.5-1.fc43.x86_64 libssh-0.11.5-1.fc43.x86_64 libssh-config-0.11.5-1.fc43.noarch libstdc++-15.3.1-1.fc43.x86_64 libtasn1-4.21.0-1.fc43.x86_64 libtool-ltdl-2.5.4-8.fc43.x86_64 libunistring-1.1-10.fc43.x86_64 libusb1-1.0.30-1.fc43.x86_64 libuuid-2.41.5-1.fc43.x86_64 libverto-0.3.2-11.fc43.x86_64 libxcrypt-4.5.2-1.fc43.x86_64 libxml2-2.12.10-5.fc43.x86_64 libzstd-1.5.7-2.fc43.x86_64 lua-libs-5.4.8-4.fc43.x86_64 lua-srpm-macros-1-16.fc43.noarch lz4-libs-1.10.0-3.fc43.x86_64 mpfr-4.2.2-2.fc43.x86_64 ncurses-base-6.5-7.20250614.fc43.noarch ncurses-libs-6.5-7.20250614.fc43.x86_64 nettle-3.10.1-2.fc43.x86_64 npth-1.8-3.fc43.x86_64 ocaml-srpm-macros-11-2.fc43.noarch openblas-srpm-macros-2-20.fc43.noarch openldap-2.6.15-1.fc43.x86_64 openssl-libs-3.5.9-1.fc43.x86_64 p11-kit-0.26.5-1.fc43.x86_64 p11-kit-trust-0.26.5-1.fc43.x86_64 package-notes-srpm-macros-0.20-1.fc43.noarch pam-libs-1.7.1-5.fc43.x86_64 patch-2.8-2.fc43.x86_64 pcre2-10.47-1.fc43.x86_64 pcre2-syntax-10.47-1.fc43.noarch perl-srpm-macros-1-60.fc43.noarch pkgconf-2.3.0-3.fc43.x86_64 pkgconf-m4-2.3.0-3.fc43.noarch pkgconf-pkg-config-2.3.0-3.fc43.x86_64 popt-1.19-9.fc43.x86_64 publicsuffix-list-dafsa-20260116-1.fc43.noarch pyproject-srpm-macros-1.23.2-1.fc43.noarch python-srpm-macros-3.14-5.fc43.noarch qt5-srpm-macros-5.15.18-1.fc43.noarch qt6-srpm-macros-6.10.3-1.fc43.noarch readline-8.3-2.fc43.x86_64 redhat-rpm-config-343-14.fc43.noarch rpm-6.0.2-1.fc43.x86_64 rpm-build-6.0.2-1.fc43.x86_64 rpm-build-libs-6.0.2-1.fc43.x86_64 rpm-libs-6.0.2-1.fc43.x86_64 rpm-sequoia-1.10.3-1.fc43.x86_64 rpm-sign-libs-6.0.2-1.fc43.x86_64 rust-srpm-macros-28.5-1.fc43.noarch sed-4.9-5.fc43.x86_64 setup-2.15.0-26.fc43.noarch shadow-utils-4.18.0-3.fc43.x86_64 sqlite-libs-3.50.2-3.fc43.x86_64 systemd-libs-258.11-1.fc43.x86_64 systemd-standalone-sysusers-258.11-1.fc43.x86_64 tar-1.35-6.fc43.x86_64 tpm2-tss-4.1.3-8.fc43.x86_64 tree-sitter-srpm-macros-0.4.2-1.fc43.noarch unzip-6.0-67.fc43.x86_64 util-linux-2.41.5-1.fc43.x86_64 util-linux-core-2.41.5-1.fc43.x86_64 which-2.23-3.fc43.x86_64 xxhash-libs-0.8.4-1.fc43.x86_64 xz-5.8.1-4.fc43.x86_64 xz-libs-5.8.1-4.fc43.x86_64 zig-srpm-macros-1-5.fc43.noarch zip-3.0-44.fc43.x86_64 zlib-ng-compat-2.3.3-2.fc43.x86_64 zstd-1.5.7-2.fc43.x86_64 Start: buildsrpm Start: rpmbuild -bs Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1792886400 Wrote: /builddir/build/SRPMS/python-cobra-0.32.1-2.fc43.src.rpm Finish: rpmbuild -bs INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-43-x86_64-1792953521.519929/root/var/log/dnf5.log INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz /bin/tar: Removing leading `/' from member names Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-iaz3s42z/python-cobra/python-cobra.spec) Config(child) 0 minutes 22 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/python-cobra-0.32.1-2.fc43.src.rpm) Config(fedora-43-x86_64) Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-43-x86_64-bootstrap-1792953521.519929/root. INFO: reusing tmpfs at /var/lib/mock/fedora-43-x86_64-bootstrap-1792953521.519929/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-43-x86_64-1792953521.519929/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-6.0.2-1.fc43.x86_64 rpm-sequoia-1.10.3-1.fc43.x86_64 dnf5-5.2.18.0-5.fc43.x86_64 dnf5-plugins-5.2.18.0-5.fc43.x86_64 Finish: chroot init Start: build phase for python-cobra-0.32.1-2.fc43.src.rpm Start: build setup for python-cobra-0.32.1-2.fc43.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1792886400 Wrote: /builddir/build/SRPMS/python-cobra-0.32.1-2.fc43.src.rpm Updating and loading repositories: Additional repo copr_mhough_neurofedor 100% | 6.1 KiB/s | 1.5 KiB | 00m00s Copr repository 100% | 6.0 KiB/s | 1.5 KiB | 00m00s fedora 100% | 57.1 KiB/s | 24.9 KiB | 00m00s updates 100% | 70.2 KiB/s | 22.7 KiB | 00m00s Repositories loaded. Package Arch Version Repository Size Installing: pyproject-rpm-macros noarch 1.23.2-1.fc43 updates 156.3 KiB python3-devel x86_64 3.14.8-1.fc43 updates 2.0 MiB python3-libsbml x86_64 5.20.5-100.fc43.biofedora copr_base 33.8 MiB python3-optlang noarch 1.9.1-1.fc43 copr_base 942.5 KiB python3-pytest noarch 8.3.5-9.fc43 fedora 21.6 MiB python3-pytest-benchmark noarch 5.1.0-4.fc43 fedora 353.2 KiB python3-pytest-mock noarch 3.14.1-4.fc43 fedora 128.8 KiB python3-scipy x86_64 1.16.2-1.fc43 fedora 66.5 MiB python3-swiglpk x86_64 5.0.13-1.fc43 copr_base 449.5 KiB Installing dependencies: expat x86_64 2.8.5-1.fc43 updates 334.2 KiB flexiblas x86_64 3.5.0-1.fc43 updates 38.0 KiB flexiblas-netlib x86_64 3.5.0-1.fc43 updates 16.5 MiB flexiblas-openblas-openmp x86_64 3.5.0-1.fc43 updates 39.2 KiB glpk x86_64 5.0-14.fc43 fedora 906.6 KiB libgfortran x86_64 15.3.1-1.fc43 updates 3.3 MiB libquadmath x86_64 15.3.1-1.fc43 updates 317.9 KiB libsbml x86_64 5.20.5-100.fc43.biofedora copr_base 10.2 MiB minizip-ng-compat x86_64 4.0.10-2.fc43 fedora 162.5 KiB mpdecimal x86_64 4.0.1-2.fc43 fedora 217.2 KiB openblas x86_64 0.3.29-2.fc43 fedora 111.7 KiB openblas-openmp x86_64 0.3.29-2.fc43 fedora 43.7 MiB python-pip-wheel noarch 25.1.1-19.fc43 updates 1.2 MiB python-rpm-macros noarch 3.14-5.fc43 fedora 23.2 KiB python3 x86_64 3.14.8-1.fc43 updates 28.7 KiB python3-charset-normalizer noarch 3.4.3-3.fc43 fedora 355.7 KiB python3-cpuinfo noarch 9.0.0-16.fc43 fedora 310.8 KiB python3-idna noarch 3.18-1.fc43 updates 522.3 KiB python3-iniconfig noarch 2.1.0-3.fc43 fedora 42.4 KiB python3-libs x86_64 3.14.8-1.fc43 updates 43.5 MiB python3-mpmath noarch 1.3.0-16.fc43 fedora 5.3 MiB python3-numpy x86_64 1:2.3.5-1.fc43 updates 41.4 MiB python3-numpy-f2py x86_64 1:2.3.5-1.fc43 updates 2.1 MiB python3-packaging noarch 25.0-7.fc43 fedora 607.4 KiB python3-platformdirs noarch 4.4.0-1.fc43 updates 182.4 KiB python3-pluggy noarch 1.6.0-4.fc43 fedora 211.0 KiB python3-pooch noarch 1.9.0-1.fc43 updates 656.8 KiB python3-requests noarch 2.33.1-1.fc43 updates 477.3 KiB python3-rpm-generators noarch 14-13.fc43 fedora 81.7 KiB python3-rpm-macros noarch 3.14-5.fc43 fedora 6.5 KiB python3-sympy noarch 1.14.0-7.fc43 fedora 84.3 MiB python3-urllib3 noarch 2.8.0-3.fc43 updates 1.2 MiB suitesparse x86_64 7.11.0-1.fc43 fedora 45.5 MiB tzdata noarch 2026e-1.fc43 updates 1.6 MiB zlib-ng x86_64 2.3.3-2.fc43 updates 182.1 KiB Transaction Summary: Installing: 44 packages Total size of inbound packages is 85 MiB. Need to download 85 MiB. After this operation, 431 MiB extra will be used (install 431 MiB, remove 0 B). [ 1/44] python3-pytest-benchmark-0:5.1. 100% | 778.9 KiB/s | 122.3 KiB | 00m00s [ 2/44] python3-pytest-mock-0:3.14.1-4. 100% | 1.5 MiB/s | 43.2 KiB | 00m00s [ 3/44] python3-pytest-0:8.3.5-9.fc43.n 100% | 8.3 MiB/s | 2.2 MiB | 00m00s [ 4/44] python3-scipy-0:1.16.2-1.fc43.x 100% | 68.9 MiB/s | 16.3 MiB | 00m00s [ 5/44] python3-optlang-0:1.9.1-1.fc43. 100% | 472.7 KiB/s | 202.3 KiB | 00m00s [ 6/44] python3-swiglpk-0:5.0.13-1.fc43 100% | 373.0 KiB/s | 105.9 KiB | 00m00s [ 7/44] pyproject-rpm-macros-0:1.23.2-1 100% | 199.3 KiB/s | 54.8 KiB | 00m00s [ 8/44] python3-sympy-0:1.14.0-7.fc43.n 100% | 119.0 MiB/s | 15.9 MiB | 00m00s [ 9/44] python3-libsbml-0:5.20.5-100.fc 100% | 14.9 MiB/s | 4.5 MiB | 00m00s [10/44] python3-devel-0:3.14.8-1.fc43.x 100% | 1.0 MiB/s | 439.4 KiB | 00m00s [11/44] python3-iniconfig-0:2.1.0-3.fc4 100% | 952.8 KiB/s | 22.9 KiB | 00m00s [12/44] python3-packaging-0:25.0-7.fc43 100% | 6.3 MiB/s | 161.5 KiB | 00m00s [13/44] python3-cpuinfo-0:9.0.0-16.fc43 100% | 2.7 MiB/s | 68.7 KiB | 00m00s [14/44] glpk-0:5.0-14.fc43.x86_64 100% | 13.8 MiB/s | 396.6 KiB | 00m00s [15/44] python-rpm-macros-0:3.14-5.fc43 100% | 720.7 KiB/s | 17.3 KiB | 00m00s [16/44] python3-rpm-macros-0:3.14-5.fc4 100% | 490.1 KiB/s | 11.8 KiB | 00m00s [17/44] python3-pluggy-0:1.6.0-4.fc43.n 100% | 477.0 KiB/s | 61.5 KiB | 00m00s [18/44] minizip-ng-compat-0:4.0.10-2.fc 100% | 2.7 MiB/s | 67.1 KiB | 00m00s [19/44] python3-mpmath-0:1.3.0-16.fc43. 100% | 35.5 MiB/s | 1.1 MiB | 00m00s [20/44] suitesparse-0:7.11.0-1.fc43.x86 100% | 108.7 MiB/s | 7.9 MiB | 00m00s [21/44] mpdecimal-0:4.0.1-2.fc43.x86_64 100% | 4.0 MiB/s | 97.1 KiB | 00m00s [22/44] expat-0:2.8.5-1.fc43.x86_64 100% | 2.0 MiB/s | 129.1 KiB | 00m00s [23/44] libsbml-0:5.20.5-100.fc43.biofe 100% | 8.4 MiB/s | 2.5 MiB | 00m00s [24/44] python-pip-wheel-0:25.1.1-19.fc 100% | 7.5 MiB/s | 1.2 MiB | 00m00s [25/44] python3-libs-0:3.14.8-1.fc43.x8 100% | 21.3 MiB/s | 9.9 MiB | 00m00s [26/44] python3-0:3.14.8-1.fc43.x86_64 100% | 565.6 KiB/s | 29.4 KiB | 00m00s [27/44] flexiblas-netlib-0:3.5.0-1.fc43 100% | 56.2 MiB/s | 4.5 MiB | 00m00s [28/44] flexiblas-0:3.5.0-1.fc43.x86_64 100% | 443.9 KiB/s | 23.1 KiB | 00m00s [29/44] flexiblas-openblas-openmp-0:3.5 100% | 319.6 KiB/s | 17.3 KiB | 00m00s [30/44] openblas-openmp-0:0.3.29-2.fc43 100% | 92.4 MiB/s | 5.4 MiB | 00m00s [31/44] libgfortran-0:15.3.1-1.fc43.x86 100% | 15.8 MiB/s | 973.6 KiB | 00m00s [32/44] python3-numpy-f2py-1:2.3.5-1.fc 100% | 8.6 MiB/s | 510.8 KiB | 00m00s [33/44] python3-pooch-0:1.9.0-1.fc43.no 100% | 2.6 MiB/s | 145.9 KiB | 00m00s [34/44] openblas-0:0.3.29-2.fc43.x86_64 100% | 1.7 MiB/s | 42.3 KiB | 00m00s [35/44] tzdata-0:2026e-1.fc43.noarch 100% | 1.4 MiB/s | 713.0 KiB | 00m00s [36/44] python3-numpy-1:2.3.5-1.fc43.x8 100% | 38.4 MiB/s | 8.2 MiB | 00m00s [37/44] zlib-ng-0:2.3.3-2.fc43.x86_64 100% | 1.7 MiB/s | 96.3 KiB | 00m00s [38/44] python3-platformdirs-0:4.4.0-1. 100% | 927.2 KiB/s | 49.1 KiB | 00m00s [39/44] python3-charset-normalizer-0:3. 100% | 4.6 MiB/s | 117.3 KiB | 00m00s [40/44] python3-requests-0:2.33.1-1.fc4 100% | 3.0 MiB/s | 160.6 KiB | 00m00s [41/44] libquadmath-0:15.3.1-1.fc43.x86 100% | 3.8 MiB/s | 213.7 KiB | 00m00s [42/44] python3-idna-0:3.18-1.fc43.noar 100% | 1.8 MiB/s | 104.3 KiB | 00m00s [43/44] python3-rpm-generators-0:14-13. 100% | 1.2 MiB/s | 28.5 KiB | 00m00s [44/44] python3-urllib3-0:2.8.0-3.fc43. 100% | 5.7 MiB/s | 309.9 KiB | 00m00s -------------------------------------------------------------------------------- [44/44] Total 100% | 45.9 MiB/s | 85.2 MiB | 00m02s Running transaction [ 1/46] Verify package files 100% | 160.0 B/s | 44.0 B | 00m00s [ 2/46] Prepare transaction 100% | 676.0 B/s | 44.0 B | 00m00s [ 3/46] Installing libgfortran-0:15.3.1 100% | 417.9 MiB/s | 3.3 MiB | 00m00s [ 4/46] Installing python-rpm-macros-0: 100% | 0.0 B/s | 23.9 KiB | 00m00s [ 5/46] Installing python3-rpm-macros-0 100% | 0.0 B/s | 6.8 KiB | 00m00s [ 6/46] Installing minizip-ng-compat-0: 100% | 159.5 MiB/s | 163.3 KiB | 00m00s [ 7/46] Installing libsbml-0:5.20.5-100 100% | 463.6 MiB/s | 10.2 MiB | 00m00s [ 8/46] Installing pyproject-rpm-macros 100% | 154.9 MiB/s | 158.6 KiB | 00m00s [ 9/46] Installing libquadmath-0:15.3.1 100% | 311.7 MiB/s | 319.2 KiB | 00m00s [10/46] Installing zlib-ng-0:2.3.3-2.fc 100% | 179.2 MiB/s | 183.5 KiB | 00m00s [11/46] Installing openblas-0:0.3.29-2. 100% | 0.0 B/s | 113.5 KiB | 00m00s [12/46] Installing openblas-openmp-0:0. 100% | 693.4 MiB/s | 43.7 MiB | 00m00s [13/46] Installing flexiblas-netlib-0:3 100% | 366.9 MiB/s | 16.5 MiB | 00m00s [14/46] Installing flexiblas-0:3.5.0-1. 100% | 0.0 B/s | 39.2 KiB | 00m00s [15/46] Installing flexiblas-openblas-o 100% | 39.1 MiB/s | 40.1 KiB | 00m00s [16/46] Installing suitesparse-0:7.11.0 100% | 561.6 MiB/s | 45.5 MiB | 00m00s [17/46] Installing glpk-0:5.0-14.fc43.x 100% | 147.8 MiB/s | 907.9 KiB | 00m00s [18/46] Installing tzdata-0:2026e-1.fc4 100% | 76.5 MiB/s | 1.9 MiB | 00m00s [19/46] Installing python-pip-wheel-0:2 100% | 623.0 MiB/s | 1.2 MiB | 00m00s [20/46] Installing expat-0:2.8.5-1.fc43 100% | 27.4 MiB/s | 336.3 KiB | 00m00s [21/46] Installing mpdecimal-0:4.0.1-2. 100% | 42.7 MiB/s | 218.8 KiB | 00m00s [22/46] Installing python3-libs-0:3.14. 100% | 399.4 MiB/s | 43.9 MiB | 00m00s [23/46] Installing python3-0:3.14.8-1.f 100% | 2.5 MiB/s | 30.4 KiB | 00m00s [24/46] Installing python3-packaging-0: 100% | 201.8 MiB/s | 619.9 KiB | 00m00s [25/46] Installing python3-numpy-f2py-1 100% | 98.7 MiB/s | 2.2 MiB | 00m00s [26/46] Installing python3-numpy-1:2.3. 100% | 393.2 MiB/s | 41.7 MiB | 00m00s [27/46] Installing python3-idna-0:3.18- 100% | 39.8 MiB/s | 530.2 KiB | 00m00s [28/46] Installing python3-urllib3-0:2. 100% | 294.8 MiB/s | 1.2 MiB | 00m00s [29/46] Installing python3-rpm-generato 100% | 0.0 B/s | 82.9 KiB | 00m00s [30/46] Installing python3-swiglpk-0:5. 100% | 221.4 MiB/s | 453.3 KiB | 00m00s [31/46] Installing python3-iniconfig-0: 100% | 45.4 MiB/s | 46.5 KiB | 00m00s [32/46] Installing python3-pluggy-0:1.6 100% | 70.8 MiB/s | 217.5 KiB | 00m00s [33/46] Installing python3-pytest-0:8.3 100% | 419.1 MiB/s | 21.8 MiB | 00m00s [34/46] Installing python3-cpuinfo-0:9. 100% | 25.6 MiB/s | 314.8 KiB | 00m00s [35/46] Installing python3-mpmath-0:1.3 100% | 244.4 MiB/s | 5.4 MiB | 00m00s [36/46] Installing python3-sympy-0:1.14 100% | 378.7 MiB/s | 85.2 MiB | 00m00s [37/46] Installing python3-platformdirs 100% | 184.4 MiB/s | 188.8 KiB | 00m00s [38/46] Installing python3-charset-norm 100% | 29.8 MiB/s | 365.8 KiB | 00m00s [39/46] Installing python3-requests-0:2 100% | 239.0 MiB/s | 489.5 KiB | 00m00s [40/46] Installing python3-pooch-0:1.9. 100% | 93.9 MiB/s | 672.8 KiB | 00m00s [41/46] Installing python3-scipy-0:1.16 100% | 423.6 MiB/s | 66.9 MiB | 00m00s [42/46] Installing python3-optlang-0:1. 100% | 310.8 MiB/s | 954.8 KiB | 00m00s [43/46] Installing python3-pytest-bench 100% | 27.6 MiB/s | 367.0 KiB | 00m00s [44/46] Installing python3-pytest-mock- 100% | 65.4 MiB/s | 133.9 KiB | 00m00s [45/46] Installing python3-devel-0:3.14 100% | 111.4 MiB/s | 2.0 MiB | 00m00s [46/46] Installing python3-libsbml-0:5. 100% | 334.9 MiB/s | 33.8 MiB | 00m00s Warning: skipped OpenPGP checks for 4 packages from repository: copr_base Complete! Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1792886400 Wrote: /builddir/build/SRPMS/python-cobra-0.32.1-2.fc43.src.rpm Updating and loading repositories: Additional repo copr_mhough_neurofedor 100% | 10.4 KiB/s | 1.5 KiB | 00m00s Copr repository 100% | 10.4 KiB/s | 1.5 KiB | 00m00s fedora 100% | 79.1 KiB/s | 24.9 KiB | 00m00s updates 100% | 107.4 KiB/s | 22.7 KiB | 00m00s Repositories loaded. Nothing to do. Package "pyproject-rpm-macros-1.23.2-1.fc43.noarch" is already installed. Package "python3-devel-3.14.8-1.fc43.x86_64" is already installed. Package "python3-libsbml-5.20.5-100.fc43.biofedora.x86_64" is already installed. Package "python3-optlang-1.9.1-1.fc43.noarch" is already installed. Package "python3-pytest-8.3.5-9.fc43.noarch" is already installed. Package "python3-pytest-benchmark-5.1.0-4.fc43.noarch" is already installed. Package "python3-pytest-mock-3.14.1-4.fc43.noarch" is already installed. Package "python3-scipy-1.16.2-1.fc43.x86_64" is already installed. Package "python3-swiglpk-5.0.13-1.fc43.x86_64" is already installed. Finish: build setup for python-cobra-0.32.1-2.fc43.src.rpm Start: rpmbuild python-cobra-0.32.1-2.fc43.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1792886400 Executing(%mkbuilddir): /bin/sh -e /var/tmp/rpm-tmp.1dSBiF Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.Nhkj0K + umask 022 + cd /builddir/build/BUILD/python-cobra-0.32.1-build + cd /builddir/build/BUILD/python-cobra-0.32.1-build + rm -rf cobrapy-0.32.1 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/cobrapy-0.32.1.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd cobrapy-0.32.1 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/cobra-0.32.1-pandas3-positional-getitem.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + grep -q $'^\tpython-libsbml ~=5.19$' setup.cfg + sed -i $'/^\tpython-libsbml ~=5.19$/d' setup.cfg + grep -q $'^\tfuture$' setup.cfg + sed -i $'/^\tfuture$/d' setup.cfg + grep -q $'^\tpandas >=1.0,<3.0$' setup.cfg + sed -i $'s/^\tpandas >=1.0,<3.0$/\tpandas >=1.0/' setup.cfg + RPM_EC=0 ++ jobs -p + exit 0 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.wFLDkF + umask 022 + cd /builddir/build/BUILD/python-cobra-0.32.1-build + cd cobrapy-0.32.1 + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(packaging)' + echo 'python3dist(pip) >= 19' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/python-cobra-0.32.1-build/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/python-cobra-0.32.1-build/.pyproject-builddir + RPM_TOXENV=py314 + FEDORA=43 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/python-cobra-0.32.1-build/pyproject-wheeldir --output /builddir/build/BUILD/python-cobra-0.32.1-build/python-cobra-0.32.1-2.fc43.x86_64-pyproject-buildrequires --dep-overrides-file /builddir/build/BUILD/python-cobra-0.32.1-build/python-cobra-0.32.1-2.fc43.x86_64-pyproject-dep-overrides Handling setuptools>=40.6.0 from build-system.requires Requirement not satisfied: setuptools>=40.6.0 Handling wheel from build-system.requires Requirement not satisfied: wheel Exiting dependency generation pass: build backend + cat /builddir/build/BUILD/python-cobra-0.32.1-build/python-cobra-0.32.1-2.fc43.x86_64-pyproject-buildrequires + rm -rfv '*.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/python-cobra-0.32.1-2.fc43.buildreqs.nosrc.rpm INFO: Going to install missing dynamic buildrequires Updating and loading repositories: Additional repo copr_mhough_neurofedor 100% | 9.0 KiB/s | 1.5 KiB | 00m00s Copr repository 100% | 8.9 KiB/s | 1.5 KiB | 00m00s fedora 100% | 62.1 KiB/s | 24.9 KiB | 00m00s updates 100% | 70.4 KiB/s | 22.7 KiB | 00m00s Repositories loaded. Package "pyproject-rpm-macros-1.23.2-1.fc43.noarch" is already installed. Package "python3-devel-3.14.8-1.fc43.x86_64" is already installed. Package "python3-libsbml-5.20.5-100.fc43.biofedora.x86_64" is already installed. Package "python3-optlang-1.9.1-1.fc43.noarch" is already installed. Package "python3-pytest-8.3.5-9.fc43.noarch" is already installed. Package "python3-pytest-benchmark-5.1.0-4.fc43.noarch" is already installed. Package "python3-pytest-mock-3.14.1-4.fc43.noarch" is already installed. Package "python3-scipy-1.16.2-1.fc43.x86_64" is already installed. Package "python3-swiglpk-5.0.13-1.fc43.x86_64" is already installed. Package "python3-packaging-25.0-7.fc43.noarch" is already installed. Package Arch Version Repository Size Installing: python3-pip noarch 25.1.1-19.fc43 updates 12.5 MiB python3-setuptools noarch 78.1.1-15.fc43 fedora 9.0 MiB python3-wheel noarch 1:0.45.1-20.fc43 updates 593.1 KiB Transaction Summary: Installing: 3 packages Total size of inbound packages is 5 MiB. Need to download 5 MiB. After this operation, 22 MiB extra will be used (install 22 MiB, remove 0 B). [1/3] python3-setuptools-0:78.1.1-15.fc 100% | 8.0 MiB/s | 2.1 MiB | 00m00s [2/3] python3-wheel-1:0.45.1-20.fc43.no 100% | 708.0 KiB/s | 182.0 KiB | 00m00s [3/3] python3-pip-0:25.1.1-19.fc43.noar 100% | 8.2 MiB/s | 2.8 MiB | 00m00s -------------------------------------------------------------------------------- [3/3] Total 100% | 14.7 MiB/s | 5.1 MiB | 00m00s Running transaction [1/5] Verify package files 100% | 187.0 B/s | 3.0 B | 00m00s [2/5] Prepare transaction 100% | 142.0 B/s | 3.0 B | 00m00s [3/5] Installing python3-wheel-1:0.45.1 100% | 35.2 MiB/s | 613.1 KiB | 00m00s [4/5] Installing python3-pip-0:25.1.1-1 100% | 216.8 MiB/s | 12.8 MiB | 00m00s [5/5] Installing python3-setuptools-0:7 100% | 214.4 MiB/s | 9.2 MiB | 00m00s Complete! Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1792886400 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.HJicXw + umask 022 + cd /builddir/build/BUILD/python-cobra-0.32.1-build + cd cobrapy-0.32.1 + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(packaging)' + echo 'python3dist(pip) >= 19' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/python-cobra-0.32.1-build/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/python-cobra-0.32.1-build/.pyproject-builddir + RPM_TOXENV=py314 + FEDORA=43 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/python-cobra-0.32.1-build/pyproject-wheeldir --output /builddir/build/BUILD/python-cobra-0.32.1-build/python-cobra-0.32.1-2.fc43.x86_64-pyproject-buildrequires --dep-overrides-file /builddir/build/BUILD/python-cobra-0.32.1-build/python-cobra-0.32.1-2.fc43.x86_64-pyproject-dep-overrides Handling setuptools>=40.6.0 from build-system.requires Requirement satisfied: setuptools>=40.6.0 (installed: setuptools 78.1.1) Handling wheel from build-system.requires Requirement satisfied: wheel (installed: wheel 0.45.1) /usr/lib/python3.14/site-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: GNU General Public License v2 or later (GPLv2+) License :: OSI Approved :: GNU Lesser General Public License v2 or later (LGPLv2+) See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() running egg_info creating src/cobra.egg-info writing src/cobra.egg-info/PKG-INFO writing dependency_links to src/cobra.egg-info/dependency_links.txt writing requirements to src/cobra.egg-info/requires.txt writing top-level names to src/cobra.egg-info/top_level.txt writing manifest file 'src/cobra.egg-info/SOURCES.txt' reading manifest file 'src/cobra.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE' writing manifest file 'src/cobra.egg-info/SOURCES.txt' running dist_info creating cobra.egg-info writing cobra.egg-info/PKG-INFO writing dependency_links to cobra.egg-info/dependency_links.txt writing requirements to cobra.egg-info/requires.txt writing top-level names to cobra.egg-info/top_level.txt writing manifest file 'cobra.egg-info/SOURCES.txt' reading manifest file 'cobra.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE' writing manifest file 'cobra.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/python-cobra-0.32.1-build/cobrapy-0.32.1/cobra-0.32.1.dist-info' /usr/lib/python3.14/site-packages/setuptools/_distutils/cmd.py:135: SetuptoolsDeprecationWarning: bdist_wheel.universal is deprecated !! ******************************************************************************** With Python 2.7 end-of-life, support for building universal wheels (i.e., wheels that support both Python 2 and Python 3) is being obviated. Please discontinue using this option, or if you still need it, file an issue with pypa/setuptools describing your use case. This deprecation is overdue, please update your project and remove deprecated calls to avoid build errors in the future. ******************************************************************************** !! self.finalize_options() Handling appdirs~=1.4 from hook generated metadata: Requires-Dist (cobra) Requirement not satisfied: appdirs~=1.4 Handling depinfo~=2.2 from hook generated metadata: Requires-Dist (cobra) Requirement not satisfied: depinfo~=2.2 Handling httpx~=0.24 from hook generated metadata: Requires-Dist (cobra) Requirement not satisfied: httpx~=0.24 Handling numpy>=1.13 from hook generated metadata: Requires-Dist (cobra) Requirement satisfied: numpy>=1.13 (installed: numpy 2.3.5) Handling optlang~=1.9 from hook generated metadata: Requires-Dist (cobra) Requirement satisfied: optlang~=1.9 (installed: optlang 1.9.1) Handling pandas>=1.0 from hook generated metadata: Requires-Dist (cobra) Requirement not satisfied: pandas>=1.0 Handling pydantic>=1.6 from hook generated metadata: Requires-Dist (cobra) Requirement not satisfied: pydantic>=1.6 Handling rich>=8.0 from hook generated metadata: Requires-Dist (cobra) Requirement not satisfied: rich>=8.0 Handling ruamel.yaml~=0.16 from hook generated metadata: Requires-Dist (cobra) Requirement not satisfied: ruamel.yaml~=0.16 Handling swiglpk from hook generated metadata: Requires-Dist (cobra) Requirement satisfied: swiglpk (installed: swiglpk 5.0.13) Handling scipy; extra == "array" from hook generated metadata: Requires-Dist (cobra) Ignoring alien requirement: scipy; extra == "array" Handling hopsy; extra == "chrr" from hook generated metadata: Requires-Dist (cobra) Ignoring alien requirement: hopsy; extra == "chrr" Handling black; extra == "development" from hook generated metadata: Requires-Dist (cobra) Ignoring alien requirement: black; extra == "development" Handling bumpversion; extra == "development" from hook generated metadata: Requires-Dist (cobra) Ignoring alien requirement: bumpversion; extra == "development" Handling isort; extra == "development" from hook generated metadata: Requires-Dist (cobra) Ignoring alien requirement: isort; extra == "development" Handling tox; extra == "development" from hook generated metadata: Requires-Dist (cobra) Ignoring alien requirement: tox; extra == "development" + cat /builddir/build/BUILD/python-cobra-0.32.1-build/python-cobra-0.32.1-2.fc43.x86_64-pyproject-buildrequires + rm -rfv cobra-0.32.1.dist-info/ removed 'cobra-0.32.1.dist-info/licenses/LICENSE' removed directory 'cobra-0.32.1.dist-info/licenses' removed 'cobra-0.32.1.dist-info/METADATA' removed 'cobra-0.32.1.dist-info/zip-safe' removed 'cobra-0.32.1.dist-info/top_level.txt' removed directory 'cobra-0.32.1.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/python-cobra-0.32.1-2.fc43.buildreqs.nosrc.rpm INFO: Going to install missing dynamic buildrequires Updating and loading repositories: Additional repo copr_mhough_neurofedor 100% | 8.8 KiB/s | 1.5 KiB | 00m00s Copr repository 100% | 8.8 KiB/s | 1.5 KiB | 00m00s fedora 100% | 48.2 KiB/s | 24.9 KiB | 00m01s updates 100% | 92.9 KiB/s | 22.7 KiB | 00m00s Repositories loaded. Package "pyproject-rpm-macros-1.23.2-1.fc43.noarch" is already installed. Package "python3-devel-3.14.8-1.fc43.x86_64" is already installed. Package "python3-libsbml-5.20.5-100.fc43.biofedora.x86_64" is already installed. Package "python3-optlang-1.9.1-1.fc43.noarch" is already installed. Package "python3-pytest-8.3.5-9.fc43.noarch" is already installed. Package "python3-pytest-benchmark-5.1.0-4.fc43.noarch" is already installed. Package "python3-pytest-mock-3.14.1-4.fc43.noarch" is already installed. Package "python3-scipy-1.16.2-1.fc43.x86_64" is already installed. Package "python3-swiglpk-5.0.13-1.fc43.x86_64" is already installed. Package "python3-numpy-1:2.3.5-1.fc43.x86_64" is already installed. Package "python3-packaging-25.0-7.fc43.noarch" is already installed. Package "python3-pip-25.1.1-19.fc43.noarch" is already installed. Package "python3-setuptools-78.1.1-15.fc43.noarch" is already installed. Package "python3-swiglpk-5.0.13-1.fc43.x86_64" is already installed. Package "python3-wheel-1:0.45.1-20.fc43.noarch" is already installed. Package Arch Version Repository Size Installing: python3-appdirs noarch 1.4.4-30.fc43 fedora 68.5 KiB python3-depinfo noarch 2.2.0-1.fc43 copr_base 95.7 KiB python3-httpx noarch 0.28.1-9.fc43 fedora 992.1 KiB python3-pandas x86_64 2.3.3-2.fc43 updates 41.7 MiB python3-pydantic noarch 2.12.5-4.fc43 updates 5.1 MiB python3-rich noarch 14.1.0-3.fc43 fedora 2.8 MiB python3-ruamel-yaml noarch 0.18.16-1.fc43 updates 1.8 MiB Installing dependencies: libyaml x86_64 0.2.5-17.fc43 fedora 134.6 KiB python3-Bottleneck x86_64 1.6.0-1.fc43 updates 577.8 KiB python3-annotated-types noarch 0.7.0-8.fc43 fedora 85.1 KiB python3-anyio noarch 4.13.0-1.fc43 updates 1.5 MiB python3-certifi noarch 2025.07.09-3.fc43 fedora 7.4 KiB python3-dateutil noarch 1:2.9.0.post0-6.fc43 fedora 877.5 KiB python3-h11 noarch 0.16.0-5.fc43 fedora 279.9 KiB python3-httpcore noarch 1.0.9-5.fc43 fedora 853.9 KiB python3-markdown-it-py noarch 3.0.0-13.fc43 fedora 541.6 KiB python3-mdurl noarch 0.1.2-13.fc43 fedora 44.0 KiB python3-numexpr x86_64 2.12.1-2.fc43 fedora 819.0 KiB python3-pydantic-core x86_64 2.41.5-11.fc43 updates 5.3 MiB python3-pygments noarch 2.19.1-6.fc43 fedora 11.3 MiB python3-pytz noarch 2026.5-1.fc43 updates 228.2 KiB python3-ruamel-yaml-clib x86_64 0.2.12-6.fc43 fedora 272.4 KiB python3-six noarch 1.17.0-7.fc43 fedora 118.0 KiB python3-typing-extensions noarch 4.16.0-4.fc43 updates 552.0 KiB python3-typing-inspection noarch 0.4.4-1.fc43 updates 93.4 KiB Transaction Summary: Installing: 25 packages Total size of inbound packages is 16 MiB. Need to download 16 MiB. After this operation, 76 MiB extra will be used (install 76 MiB, remove 0 B). [ 1/25] python3-appdirs-0:1.4.4-30.fc43 100% | 186.7 KiB/s | 23.9 KiB | 00m00s [ 2/25] python3-httpx-0:0.28.1-9.fc43.n 100% | 1.2 MiB/s | 213.7 KiB | 00m00s [ 3/25] python3-depinfo-0:2.2.0-1.fc43. 100% | 153.1 KiB/s | 41.0 KiB | 00m00s [ 4/25] python3-rich-0:14.1.0-3.fc43.no 100% | 3.8 MiB/s | 623.6 KiB | 00m00s [ 5/25] python3-ruamel-yaml-0:0.18.16-1 100% | 679.8 KiB/s | 322.2 KiB | 00m00s [ 6/25] python3-certifi-0:2025.07.09-3. 100% | 405.6 KiB/s | 15.0 KiB | 00m00s [ 7/25] python3-httpcore-0:1.0.9-5.fc43 100% | 4.8 MiB/s | 157.5 KiB | 00m00s [ 8/25] python3-markdown-it-py-0:3.0.0- 100% | 5.9 MiB/s | 206.0 KiB | 00m00s [ 9/25] python3-pygments-0:2.19.1-6.fc4 100% | 27.8 MiB/s | 2.7 MiB | 00m00s [10/25] python3-ruamel-yaml-clib-0:0.2. 100% | 2.7 MiB/s | 108.7 KiB | 00m00s [11/25] python3-pydantic-0:2.12.5-4.fc4 100% | 1.6 MiB/s | 1.0 MiB | 00m01s [12/25] python3-dateutil-1:2.9.0.post0- 100% | 14.0 MiB/s | 344.3 KiB | 00m00s [13/25] python3-annotated-types-0:0.7.0 100% | 830.5 KiB/s | 31.6 KiB | 00m00s [14/25] python3-numexpr-0:2.12.1-2.fc43 100% | 3.6 MiB/s | 223.0 KiB | 00m00s [15/25] python3-typing-inspection-0:0.4 100% | 170.6 KiB/s | 33.8 KiB | 00m00s [16/25] python3-pandas-0:2.3.3-2.fc43.x 100% | 8.1 MiB/s | 7.7 MiB | 00m01s [17/25] python3-h11-0:0.16.0-5.fc43.noa 100% | 1.8 MiB/s | 81.0 KiB | 00m00s [18/25] python3-mdurl-0:0.1.2-13.fc43.n 100% | 1.1 MiB/s | 31.3 KiB | 00m00s [19/25] libyaml-0:0.2.5-17.fc43.x86_64 100% | 1.3 MiB/s | 60.1 KiB | 00m00s [20/25] python3-six-0:1.17.0-7.fc43.noa 100% | 1.8 MiB/s | 41.8 KiB | 00m00s [21/25] python3-typing-extensions-0:4.1 100% | 1.9 MiB/s | 114.1 KiB | 00m00s [22/25] python3-Bottleneck-0:1.6.0-1.fc 100% | 2.4 MiB/s | 181.3 KiB | 00m00s [23/25] python3-pydantic-core-0:2.41.5- 100% | 4.3 MiB/s | 1.7 MiB | 00m00s [24/25] python3-pytz-0:2026.5-1.fc43.no 100% | 1.0 MiB/s | 67.5 KiB | 00m00s [25/25] python3-anyio-0:4.13.0-1.fc43.n 100% | 3.5 MiB/s | 316.0 KiB | 00m00s -------------------------------------------------------------------------------- [25/25] Total 100% | 11.3 MiB/s | 16.2 MiB | 00m01s Running transaction [ 1/27] Verify package files 100% | 480.0 B/s | 25.0 B | 00m00s [ 2/27] Prepare transaction 100% | 625.0 B/s | 25.0 B | 00m00s [ 3/27] Installing python3-typing-exten 100% | 270.6 MiB/s | 554.3 KiB | 00m00s [ 4/27] Installing python3-certifi-0:20 100% | 10.9 MiB/s | 11.2 KiB | 00m00s [ 5/27] Installing python3-pydantic-cor 100% | 411.6 MiB/s | 5.4 MiB | 00m00s [ 6/27] Installing python3-typing-inspe 100% | 95.2 MiB/s | 97.5 KiB | 00m00s [ 7/27] Installing python3-anyio-0:4.13 100% | 297.2 MiB/s | 1.5 MiB | 00m00s [ 8/27] Installing python3-pytz-0:2026. 100% | 228.1 MiB/s | 233.6 KiB | 00m00s [ 9/27] Installing python3-Bottleneck-0 100% | 195.5 MiB/s | 600.5 KiB | 00m00s [10/27] Installing python3-six-0:1.17.0 100% | 117.5 MiB/s | 120.3 KiB | 00m00s [11/27] Installing python3-dateutil-1:2 100% | 290.1 MiB/s | 891.1 KiB | 00m00s [12/27] Installing libyaml-0:0.2.5-17.f 100% | 132.8 MiB/s | 136.0 KiB | 00m00s [13/27] Installing python3-ruamel-yaml- 100% | 371.6 MiB/s | 1.9 MiB | 00m00s [14/27] Installing python3-ruamel-yaml- 100% | 268.3 MiB/s | 274.8 KiB | 00m00s [15/27] Installing python3-mdurl-0:0.1. 100% | 48.3 MiB/s | 49.4 KiB | 00m00s [16/27] Installing python3-markdown-it- 100% | 38.1 MiB/s | 585.7 KiB | 00m00s [17/27] Installing python3-h11-0:0.16.0 100% | 140.6 MiB/s | 287.9 KiB | 00m00s [18/27] Installing python3-httpcore-0:1 100% | 284.6 MiB/s | 874.4 KiB | 00m00s [19/27] Installing python3-annotated-ty 100% | 86.2 MiB/s | 88.2 KiB | 00m00s [20/27] Installing python3-numexpr-0:2. 100% | 162.2 MiB/s | 830.5 KiB | 00m00s [21/27] Installing python3-pygments-0:2 100% | 244.4 MiB/s | 11.5 MiB | 00m00s [22/27] Installing python3-rich-0:14.1. 100% | 283.6 MiB/s | 2.8 MiB | 00m00s [23/27] Installing python3-pandas-0:2.3 100% | 455.8 MiB/s | 41.9 MiB | 00m00s [24/27] Installing python3-pydantic-0:2 100% | 394.9 MiB/s | 5.1 MiB | 00m00s [25/27] Installing python3-httpx-0:0.28 100% | 328.0 MiB/s | 1.0 MiB | 00m00s [26/27] Installing python3-depinfo-0:2. 100% | 8.3 MiB/s | 110.5 KiB | 00m00s [27/27] Installing python3-appdirs-0:1. 100% | 4.1 MiB/s | 70.8 KiB | 00m00s Warning: skipped OpenPGP checks for 1 package from repository: copr_base Complete! Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1792886400 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.zrmkyS + umask 022 + cd /builddir/build/BUILD/python-cobra-0.32.1-build + cd cobrapy-0.32.1 + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(packaging)' + echo 'python3dist(pip) >= 19' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/python-cobra-0.32.1-build/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/python-cobra-0.32.1-build/.pyproject-builddir + RPM_TOXENV=py314 + FEDORA=43 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/python-cobra-0.32.1-build/pyproject-wheeldir --output /builddir/build/BUILD/python-cobra-0.32.1-build/python-cobra-0.32.1-2.fc43.x86_64-pyproject-buildrequires --dep-overrides-file /builddir/build/BUILD/python-cobra-0.32.1-build/python-cobra-0.32.1-2.fc43.x86_64-pyproject-dep-overrides Handling setuptools>=40.6.0 from build-system.requires Requirement satisfied: setuptools>=40.6.0 (installed: setuptools 78.1.1) Handling wheel from build-system.requires Requirement satisfied: wheel (installed: wheel 0.45.1) /usr/lib/python3.14/site-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: GNU General Public License v2 or later (GPLv2+) License :: OSI Approved :: GNU Lesser General Public License v2 or later (LGPLv2+) See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() running egg_info writing src/cobra.egg-info/PKG-INFO writing dependency_links to src/cobra.egg-info/dependency_links.txt writing requirements to src/cobra.egg-info/requires.txt writing top-level names to src/cobra.egg-info/top_level.txt reading manifest file 'src/cobra.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE' writing manifest file 'src/cobra.egg-info/SOURCES.txt' running dist_info writing cobra.egg-info/PKG-INFO writing dependency_links to cobra.egg-info/dependency_links.txt writing requirements to cobra.egg-info/requires.txt writing top-level names to cobra.egg-info/top_level.txt reading manifest file 'cobra.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE' writing manifest file 'cobra.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/python-cobra-0.32.1-build/cobrapy-0.32.1/cobra-0.32.1.dist-info' /usr/lib/python3.14/site-packages/setuptools/_distutils/cmd.py:135: SetuptoolsDeprecationWarning: bdist_wheel.universal is deprecated !! ******************************************************************************** With Python 2.7 end-of-life, support for building universal wheels (i.e., wheels that support both Python 2 and Python 3) is being obviated. Please discontinue using this option, or if you still need it, file an issue with pypa/setuptools describing your use case. This deprecation is overdue, please update your project and remove deprecated calls to avoid build errors in the future. ******************************************************************************** !! self.finalize_options() Handling appdirs~=1.4 from hook generated metadata: Requires-Dist (cobra) Requirement satisfied: appdirs~=1.4 (installed: appdirs 1.4.4) Handling depinfo~=2.2 from hook generated metadata: Requires-Dist (cobra) Requirement satisfied: depinfo~=2.2 (installed: depinfo 2.2.0) Handling httpx~=0.24 from hook generated metadata: Requires-Dist (cobra) Requirement satisfied: httpx~=0.24 (installed: httpx 0.28.1) Handling numpy>=1.13 from hook generated metadata: Requires-Dist (cobra) Requirement satisfied: numpy>=1.13 (installed: numpy 2.3.5) Handling optlang~=1.9 from hook generated metadata: Requires-Dist (cobra) Requirement satisfied: optlang~=1.9 (installed: optlang 1.9.1) Handling pandas>=1.0 from hook generated metadata: Requires-Dist (cobra) Requirement satisfied: pandas>=1.0 (installed: pandas 2.3.3) Handling pydantic>=1.6 from hook generated metadata: Requires-Dist (cobra) Requirement satisfied: pydantic>=1.6 (installed: pydantic 2.12.5) Handling rich>=8.0 from hook generated metadata: Requires-Dist (cobra) Requirement satisfied: rich>=8.0 (installed: rich 14.1.0) Handling ruamel.yaml~=0.16 from hook generated metadata: Requires-Dist (cobra) Requirement satisfied: ruamel.yaml~=0.16 (installed: ruamel.yaml 0.18.16) Handling swiglpk from hook generated metadata: Requires-Dist (cobra) Requirement satisfied: swiglpk (installed: swiglpk 5.0.13) Handling scipy; extra == "array" from hook generated metadata: Requires-Dist (cobra) Ignoring alien requirement: scipy; extra == "array" Handling hopsy; extra == "chrr" from hook generated metadata: Requires-Dist (cobra) Ignoring alien requirement: hopsy; extra == "chrr" Handling black; extra == "development" from hook generated metadata: Requires-Dist (cobra) Ignoring alien requirement: black; extra == "development" Handling bumpversion; extra == "development" from hook generated metadata: Requires-Dist (cobra) Ignoring alien requirement: bumpversion; extra == "development" Handling isort; extra == "development" from hook generated metadata: Requires-Dist (cobra) Ignoring alien requirement: isort; extra == "development" Handling tox; extra == "development" from hook generated metadata: Requires-Dist (cobra) Ignoring alien requirement: tox; extra == "development" + cat /builddir/build/BUILD/python-cobra-0.32.1-build/python-cobra-0.32.1-2.fc43.x86_64-pyproject-buildrequires + rm -rfv cobra-0.32.1.dist-info/ removed 'cobra-0.32.1.dist-info/licenses/LICENSE' removed directory 'cobra-0.32.1.dist-info/licenses' removed 'cobra-0.32.1.dist-info/METADATA' removed 'cobra-0.32.1.dist-info/top_level.txt' removed 'cobra-0.32.1.dist-info/zip-safe' removed directory 'cobra-0.32.1.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/python-cobra-0.32.1-2.fc43.buildreqs.nosrc.rpm INFO: Going to install missing dynamic buildrequires Updating and loading repositories: Additional repo copr_mhough_neurofedor 100% | 8.3 KiB/s | 1.5 KiB | 00m00s Copr repository 100% | 8.2 KiB/s | 1.5 KiB | 00m00s fedora 100% | 79.6 KiB/s | 24.9 KiB | 00m00s updates 100% | 91.0 KiB/s | 22.7 KiB | 00m00s Repositories loaded. Nothing to do. Package "pyproject-rpm-macros-1.23.2-1.fc43.noarch" is already installed. Package "python3-devel-3.14.8-1.fc43.x86_64" is already installed. Package "python3-libsbml-5.20.5-100.fc43.biofedora.x86_64" is already installed. Package "python3-optlang-1.9.1-1.fc43.noarch" is already installed. Package "python3-pytest-8.3.5-9.fc43.noarch" is already installed. Package "python3-pytest-benchmark-5.1.0-4.fc43.noarch" is already installed. Package "python3-pytest-mock-3.14.1-4.fc43.noarch" is already installed. Package "python3-scipy-1.16.2-1.fc43.x86_64" is already installed. Package "python3-swiglpk-5.0.13-1.fc43.x86_64" is already installed. Package "python3-numpy-1:2.3.5-1.fc43.x86_64" is already installed. Package "python3-packaging-25.0-7.fc43.noarch" is already installed. Package "python3-pandas-2.3.3-2.fc43.x86_64" is already installed. Package "python3-pip-25.1.1-19.fc43.noarch" is already installed. Package "python3-pydantic-2.12.5-4.fc43.noarch" is already installed. Package "python3-rich-14.1.0-3.fc43.noarch" is already installed. Package "python3-setuptools-78.1.1-15.fc43.noarch" is already installed. Package "python3-swiglpk-5.0.13-1.fc43.x86_64" is already installed. Package "python3-wheel-1:0.45.1-20.fc43.noarch" is already installed. Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1792886400 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.16UaRP + umask 022 + cd /builddir/build/BUILD/python-cobra-0.32.1-build + cd cobrapy-0.32.1 + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(packaging)' + echo 'python3dist(pip) >= 19' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/python-cobra-0.32.1-build/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/python-cobra-0.32.1-build/.pyproject-builddir + RPM_TOXENV=py314 + FEDORA=43 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/python-cobra-0.32.1-build/pyproject-wheeldir --output /builddir/build/BUILD/python-cobra-0.32.1-build/python-cobra-0.32.1-2.fc43.x86_64-pyproject-buildrequires --dep-overrides-file /builddir/build/BUILD/python-cobra-0.32.1-build/python-cobra-0.32.1-2.fc43.x86_64-pyproject-dep-overrides Handling setuptools>=40.6.0 from build-system.requires Requirement satisfied: setuptools>=40.6.0 (installed: setuptools 78.1.1) Handling wheel from build-system.requires Requirement satisfied: wheel (installed: wheel 0.45.1) /usr/lib/python3.14/site-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: GNU General Public License v2 or later (GPLv2+) License :: OSI Approved :: GNU Lesser General Public License v2 or later (LGPLv2+) See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() running egg_info writing src/cobra.egg-info/PKG-INFO writing dependency_links to src/cobra.egg-info/dependency_links.txt writing requirements to src/cobra.egg-info/requires.txt writing top-level names to src/cobra.egg-info/top_level.txt reading manifest file 'src/cobra.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE' writing manifest file 'src/cobra.egg-info/SOURCES.txt' running dist_info writing cobra.egg-info/PKG-INFO writing dependency_links to cobra.egg-info/dependency_links.txt writing requirements to cobra.egg-info/requires.txt writing top-level names to cobra.egg-info/top_level.txt reading manifest file 'cobra.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE' writing manifest file 'cobra.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/python-cobra-0.32.1-build/cobrapy-0.32.1/cobra-0.32.1.dist-info' /usr/lib/python3.14/site-packages/setuptools/_distutils/cmd.py:135: SetuptoolsDeprecationWarning: bdist_wheel.universal is deprecated !! ******************************************************************************** With Python 2.7 end-of-life, support for building universal wheels (i.e., wheels that support both Python 2 and Python 3) is being obviated. Please discontinue using this option, or if you still need it, file an issue with pypa/setuptools describing your use case. This deprecation is overdue, please update your project and remove deprecated calls to avoid build errors in the future. ******************************************************************************** !! self.finalize_options() Handling appdirs~=1.4 from hook generated metadata: Requires-Dist (cobra) Requirement satisfied: appdirs~=1.4 (installed: appdirs 1.4.4) Handling depinfo~=2.2 from hook generated metadata: Requires-Dist (cobra) Requirement satisfied: depinfo~=2.2 (installed: depinfo 2.2.0) Handling httpx~=0.24 from hook generated metadata: Requires-Dist (cobra) Requirement satisfied: httpx~=0.24 (installed: httpx 0.28.1) Handling numpy>=1.13 from hook generated metadata: Requires-Dist (cobra) Requirement satisfied: numpy>=1.13 (installed: numpy 2.3.5) Handling optlang~=1.9 from hook generated metadata: Requires-Dist (cobra) Requirement satisfied: optlang~=1.9 (installed: optlang 1.9.1) Handling pandas>=1.0 from hook generated metadata: Requires-Dist (cobra) Requirement satisfied: pandas>=1.0 (installed: pandas 2.3.3) Handling pydantic>=1.6 from hook generated metadata: Requires-Dist (cobra) Requirement satisfied: pydantic>=1.6 (installed: pydantic 2.12.5) Handling rich>=8.0 from hook generated metadata: Requires-Dist (cobra) Requirement satisfied: rich>=8.0 (installed: rich 14.1.0) Handling ruamel.yaml~=0.16 from hook generated metadata: Requires-Dist (cobra) Requirement satisfied: ruamel.yaml~=0.16 (installed: ruamel.yaml 0.18.16) Handling swiglpk from hook generated metadata: Requires-Dist (cobra) Requirement satisfied: swiglpk (installed: swiglpk 5.0.13) Handling scipy; extra == "array" from hook generated metadata: Requires-Dist (cobra) Ignoring alien requirement: scipy; extra == "array" Handling hopsy; extra == "chrr" from hook generated metadata: Requires-Dist (cobra) Ignoring alien requirement: hopsy; extra == "chrr" Handling black; extra == "development" from hook generated metadata: Requires-Dist (cobra) Ignoring alien requirement: black; extra == "development" Handling bumpversion; extra == "development" from hook generated metadata: Requires-Dist (cobra) Ignoring alien requirement: bumpversion; extra == "development" Handling isort; extra == "development" from hook generated metadata: Requires-Dist (cobra) Ignoring alien requirement: isort; extra == "development" Handling tox; extra == "development" from hook generated metadata: Requires-Dist (cobra) Ignoring alien requirement: tox; extra == "development" + cat /builddir/build/BUILD/python-cobra-0.32.1-build/python-cobra-0.32.1-2.fc43.x86_64-pyproject-buildrequires + rm -rfv cobra-0.32.1.dist-info/ removed 'cobra-0.32.1.dist-info/licenses/LICENSE' removed directory 'cobra-0.32.1.dist-info/licenses' removed 'cobra-0.32.1.dist-info/METADATA' removed 'cobra-0.32.1.dist-info/zip-safe' removed 'cobra-0.32.1.dist-info/top_level.txt' removed directory 'cobra-0.32.1.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.xetxhk + umask 022 + cd /builddir/build/BUILD/python-cobra-0.32.1-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd cobrapy-0.32.1 + mkdir -p /builddir/build/BUILD/python-cobra-0.32.1-build/.pyproject-builddir + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/python-cobra-0.32.1-build/.pyproject-builddir + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_wheel.py /builddir/build/BUILD/python-cobra-0.32.1-build/pyproject-wheeldir Processing /builddir/build/BUILD/python-cobra-0.32.1-build/cobrapy-0.32.1 Preparing metadata (pyproject.toml): started Running command Preparing metadata (pyproject.toml) /usr/lib/python3.14/site-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: GNU General Public License v2 or later (GPLv2+) License :: OSI Approved :: GNU Lesser General Public License v2 or later (LGPLv2+) See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() running dist_info creating /builddir/build/BUILD/python-cobra-0.32.1-build/.pyproject-builddir/pip-modern-metadata-gf2l3wo7/cobra.egg-info writing /builddir/build/BUILD/python-cobra-0.32.1-build/.pyproject-builddir/pip-modern-metadata-gf2l3wo7/cobra.egg-info/PKG-INFO writing dependency_links to /builddir/build/BUILD/python-cobra-0.32.1-build/.pyproject-builddir/pip-modern-metadata-gf2l3wo7/cobra.egg-info/dependency_links.txt writing requirements to /builddir/build/BUILD/python-cobra-0.32.1-build/.pyproject-builddir/pip-modern-metadata-gf2l3wo7/cobra.egg-info/requires.txt writing top-level names to /builddir/build/BUILD/python-cobra-0.32.1-build/.pyproject-builddir/pip-modern-metadata-gf2l3wo7/cobra.egg-info/top_level.txt writing manifest file '/builddir/build/BUILD/python-cobra-0.32.1-build/.pyproject-builddir/pip-modern-metadata-gf2l3wo7/cobra.egg-info/SOURCES.txt' reading manifest file '/builddir/build/BUILD/python-cobra-0.32.1-build/.pyproject-builddir/pip-modern-metadata-gf2l3wo7/cobra.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE' writing manifest file '/builddir/build/BUILD/python-cobra-0.32.1-build/.pyproject-builddir/pip-modern-metadata-gf2l3wo7/cobra.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/python-cobra-0.32.1-build/.pyproject-builddir/pip-modern-metadata-gf2l3wo7/cobra-0.32.1.dist-info' /usr/lib/python3.14/site-packages/setuptools/_distutils/cmd.py:135: SetuptoolsDeprecationWarning: bdist_wheel.universal is deprecated !! ******************************************************************************** With Python 2.7 end-of-life, support for building universal wheels (i.e., wheels that support both Python 2 and Python 3) is being obviated. Please discontinue using this option, or if you still need it, file an issue with pypa/setuptools describing your use case. This deprecation is overdue, please update your project and remove deprecated calls to avoid build errors in the future. ******************************************************************************** !! self.finalize_options() Preparing metadata (pyproject.toml): finished with status 'done' Building wheels for collected packages: cobra Building wheel for cobra (pyproject.toml): started Running command Building wheel for cobra (pyproject.toml) /usr/lib/python3.14/site-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: GNU General Public License v2 or later (GPLv2+) License :: OSI Approved :: GNU Lesser General Public License v2 or later (LGPLv2+) See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() running bdist_wheel /usr/lib/python3.14/site-packages/setuptools/_distutils/cmd.py:135: SetuptoolsDeprecationWarning: bdist_wheel.universal is deprecated !! ******************************************************************************** With Python 2.7 end-of-life, support for building universal wheels (i.e., wheels that support both Python 2 and Python 3) is being obviated. Please discontinue using this option, or if you still need it, file an issue with pypa/setuptools describing your use case. This deprecation is overdue, please update your project and remove deprecated calls to avoid build errors in the future. ******************************************************************************** !! self.finalize_options() running build running build_py creating build/lib/cobra copying src/cobra/exceptions.py -> build/lib/cobra copying src/cobra/__init__.py -> build/lib/cobra creating build/lib/cobra/util copying src/cobra/util/util.py -> build/lib/cobra/util copying src/cobra/util/solver.py -> build/lib/cobra/util copying src/cobra/util/process_pool.py -> build/lib/cobra/util copying src/cobra/util/context.py -> build/lib/cobra/util copying src/cobra/util/array.py -> build/lib/cobra/util copying src/cobra/util/__init__.py -> build/lib/cobra/util creating build/lib/cobra/summary copying src/cobra/summary/summary.py -> build/lib/cobra/summary copying src/cobra/summary/reaction_summary.py -> build/lib/cobra/summary copying src/cobra/summary/model_summary.py -> build/lib/cobra/summary copying src/cobra/summary/metabolite_summary.py -> build/lib/cobra/summary copying src/cobra/summary/__init__.py -> build/lib/cobra/summary creating build/lib/cobra/sampling copying src/cobra/sampling/sampling.py -> build/lib/cobra/sampling copying src/cobra/sampling/optgp.py -> build/lib/cobra/sampling copying src/cobra/sampling/hr_sampler.py -> build/lib/cobra/sampling copying src/cobra/sampling/hopsy.py -> build/lib/cobra/sampling copying src/cobra/sampling/core.py -> build/lib/cobra/sampling copying src/cobra/sampling/achr.py -> build/lib/cobra/sampling copying src/cobra/sampling/__init__.py -> build/lib/cobra/sampling creating build/lib/cobra/medium copying src/cobra/medium/boundary_types.py -> build/lib/cobra/medium copying src/cobra/medium/minimal_medium.py -> build/lib/cobra/medium copying src/cobra/medium/annotations.py -> build/lib/cobra/medium copying src/cobra/medium/__init__.py -> build/lib/cobra/medium creating build/lib/cobra/manipulation copying src/cobra/manipulation/validate.py -> build/lib/cobra/manipulation copying src/cobra/manipulation/modify.py -> build/lib/cobra/manipulation copying src/cobra/manipulation/delete.py -> build/lib/cobra/manipulation copying src/cobra/manipulation/annotate.py -> build/lib/cobra/manipulation copying src/cobra/manipulation/__init__.py -> build/lib/cobra/manipulation creating build/lib/cobra/io copying src/cobra/io/yaml.py -> build/lib/cobra/io copying src/cobra/io/sbml.py -> build/lib/cobra/io copying src/cobra/io/mat.py -> build/lib/cobra/io copying src/cobra/io/json.py -> build/lib/cobra/io copying src/cobra/io/dict.py -> build/lib/cobra/io copying src/cobra/io/__init__.py -> build/lib/cobra/io creating build/lib/cobra/flux_analysis copying src/cobra/flux_analysis/variability.py -> build/lib/cobra/flux_analysis copying src/cobra/flux_analysis/room.py -> build/lib/cobra/flux_analysis copying src/cobra/flux_analysis/reaction.py -> build/lib/cobra/flux_analysis copying src/cobra/flux_analysis/phenotype_phase_plane.py -> build/lib/cobra/flux_analysis copying src/cobra/flux_analysis/parsimonious.py -> build/lib/cobra/flux_analysis copying src/cobra/flux_analysis/moma.py -> build/lib/cobra/flux_analysis copying src/cobra/flux_analysis/loopless.py -> build/lib/cobra/flux_analysis copying src/cobra/flux_analysis/helpers.py -> build/lib/cobra/flux_analysis copying src/cobra/flux_analysis/geometric.py -> build/lib/cobra/flux_analysis copying src/cobra/flux_analysis/gapfilling.py -> build/lib/cobra/flux_analysis copying src/cobra/flux_analysis/find_cyclic_reactions.py -> build/lib/cobra/flux_analysis copying src/cobra/flux_analysis/fastcc.py -> build/lib/cobra/flux_analysis copying src/cobra/flux_analysis/fast_snp.py -> build/lib/cobra/flux_analysis copying src/cobra/flux_analysis/deletion.py -> build/lib/cobra/flux_analysis copying src/cobra/flux_analysis/__init__.py -> build/lib/cobra/flux_analysis creating build/lib/cobra/data copying src/cobra/data/__init__.py -> build/lib/cobra/data creating build/lib/cobra/core copying src/cobra/core/species.py -> build/lib/cobra/core copying src/cobra/core/solution.py -> build/lib/cobra/core copying src/cobra/core/singleton.py -> build/lib/cobra/core copying src/cobra/core/reaction.py -> build/lib/cobra/core copying src/cobra/core/object.py -> build/lib/cobra/core copying src/cobra/core/model.py -> build/lib/cobra/core copying src/cobra/core/metabolite.py -> build/lib/cobra/core copying src/cobra/core/group.py -> build/lib/cobra/core copying src/cobra/core/gene.py -> build/lib/cobra/core copying src/cobra/core/formula.py -> build/lib/cobra/core copying src/cobra/core/dictlist.py -> build/lib/cobra/core copying src/cobra/core/configuration.py -> build/lib/cobra/core copying src/cobra/core/__init__.py -> build/lib/cobra/core creating build/lib/cobra/io/web copying src/cobra/io/web/load.py -> build/lib/cobra/io/web copying src/cobra/io/web/cobrapy_repository.py -> build/lib/cobra/io/web copying src/cobra/io/web/biomodels_repository.py -> build/lib/cobra/io/web copying src/cobra/io/web/bigg_models_repository.py -> build/lib/cobra/io/web copying src/cobra/io/web/abstract_model_repository.py -> build/lib/cobra/io/web copying src/cobra/io/web/__init__.py -> build/lib/cobra/io/web copying src/cobra/data/textbook.xml.gz -> build/lib/cobra/data copying src/cobra/data/salmonella.xml.gz -> build/lib/cobra/data copying src/cobra/data/mini_cobra.xml -> build/lib/cobra/data copying src/cobra/data/mini.yml -> build/lib/cobra/data copying src/cobra/data/mini.mat -> build/lib/cobra/data copying src/cobra/data/mini.json -> build/lib/cobra/data copying src/cobra/data/iJO1366.xml.gz -> build/lib/cobra/data copying src/cobra/io/schema_v1.json -> build/lib/cobra/io installing to build/bdist.linux-x86_64/wheel running install running install_lib creating build/bdist.linux-x86_64/wheel creating build/bdist.linux-x86_64/wheel/cobra creating build/bdist.linux-x86_64/wheel/cobra/core copying build/lib/cobra/core/__init__.py -> build/bdist.linux-x86_64/wheel/./cobra/core copying build/lib/cobra/core/configuration.py -> build/bdist.linux-x86_64/wheel/./cobra/core copying build/lib/cobra/core/dictlist.py -> build/bdist.linux-x86_64/wheel/./cobra/core copying build/lib/cobra/core/formula.py -> build/bdist.linux-x86_64/wheel/./cobra/core copying build/lib/cobra/core/gene.py -> build/bdist.linux-x86_64/wheel/./cobra/core copying build/lib/cobra/core/group.py -> build/bdist.linux-x86_64/wheel/./cobra/core copying build/lib/cobra/core/metabolite.py -> build/bdist.linux-x86_64/wheel/./cobra/core copying build/lib/cobra/core/model.py -> build/bdist.linux-x86_64/wheel/./cobra/core copying build/lib/cobra/core/object.py -> build/bdist.linux-x86_64/wheel/./cobra/core copying build/lib/cobra/core/reaction.py -> build/bdist.linux-x86_64/wheel/./cobra/core copying build/lib/cobra/core/singleton.py -> build/bdist.linux-x86_64/wheel/./cobra/core copying build/lib/cobra/core/solution.py -> build/bdist.linux-x86_64/wheel/./cobra/core copying build/lib/cobra/core/species.py -> build/bdist.linux-x86_64/wheel/./cobra/core creating build/bdist.linux-x86_64/wheel/cobra/data copying build/lib/cobra/data/iJO1366.xml.gz -> build/bdist.linux-x86_64/wheel/./cobra/data copying build/lib/cobra/data/mini.json -> build/bdist.linux-x86_64/wheel/./cobra/data copying build/lib/cobra/data/mini.mat -> build/bdist.linux-x86_64/wheel/./cobra/data copying build/lib/cobra/data/mini.yml -> build/bdist.linux-x86_64/wheel/./cobra/data copying build/lib/cobra/data/mini_cobra.xml -> build/bdist.linux-x86_64/wheel/./cobra/data copying build/lib/cobra/data/salmonella.xml.gz -> build/bdist.linux-x86_64/wheel/./cobra/data copying build/lib/cobra/data/textbook.xml.gz -> build/bdist.linux-x86_64/wheel/./cobra/data copying build/lib/cobra/data/__init__.py -> build/bdist.linux-x86_64/wheel/./cobra/data creating build/bdist.linux-x86_64/wheel/cobra/flux_analysis copying build/lib/cobra/flux_analysis/__init__.py -> build/bdist.linux-x86_64/wheel/./cobra/flux_analysis copying build/lib/cobra/flux_analysis/deletion.py -> build/bdist.linux-x86_64/wheel/./cobra/flux_analysis copying build/lib/cobra/flux_analysis/fast_snp.py -> build/bdist.linux-x86_64/wheel/./cobra/flux_analysis copying build/lib/cobra/flux_analysis/fastcc.py -> build/bdist.linux-x86_64/wheel/./cobra/flux_analysis copying build/lib/cobra/flux_analysis/find_cyclic_reactions.py -> build/bdist.linux-x86_64/wheel/./cobra/flux_analysis copying build/lib/cobra/flux_analysis/gapfilling.py -> build/bdist.linux-x86_64/wheel/./cobra/flux_analysis copying build/lib/cobra/flux_analysis/geometric.py -> build/bdist.linux-x86_64/wheel/./cobra/flux_analysis copying build/lib/cobra/flux_analysis/helpers.py -> build/bdist.linux-x86_64/wheel/./cobra/flux_analysis copying build/lib/cobra/flux_analysis/loopless.py -> build/bdist.linux-x86_64/wheel/./cobra/flux_analysis copying build/lib/cobra/flux_analysis/moma.py -> build/bdist.linux-x86_64/wheel/./cobra/flux_analysis copying build/lib/cobra/flux_analysis/parsimonious.py -> build/bdist.linux-x86_64/wheel/./cobra/flux_analysis copying build/lib/cobra/flux_analysis/phenotype_phase_plane.py -> build/bdist.linux-x86_64/wheel/./cobra/flux_analysis copying build/lib/cobra/flux_analysis/reaction.py -> build/bdist.linux-x86_64/wheel/./cobra/flux_analysis copying build/lib/cobra/flux_analysis/room.py -> build/bdist.linux-x86_64/wheel/./cobra/flux_analysis copying build/lib/cobra/flux_analysis/variability.py -> build/bdist.linux-x86_64/wheel/./cobra/flux_analysis creating build/bdist.linux-x86_64/wheel/cobra/io copying build/lib/cobra/io/schema_v1.json -> build/bdist.linux-x86_64/wheel/./cobra/io creating build/bdist.linux-x86_64/wheel/cobra/io/web copying build/lib/cobra/io/web/__init__.py -> build/bdist.linux-x86_64/wheel/./cobra/io/web copying build/lib/cobra/io/web/abstract_model_repository.py -> build/bdist.linux-x86_64/wheel/./cobra/io/web copying build/lib/cobra/io/web/bigg_models_repository.py -> build/bdist.linux-x86_64/wheel/./cobra/io/web copying build/lib/cobra/io/web/biomodels_repository.py -> build/bdist.linux-x86_64/wheel/./cobra/io/web copying build/lib/cobra/io/web/cobrapy_repository.py -> build/bdist.linux-x86_64/wheel/./cobra/io/web copying build/lib/cobra/io/web/load.py -> build/bdist.linux-x86_64/wheel/./cobra/io/web copying build/lib/cobra/io/__init__.py -> build/bdist.linux-x86_64/wheel/./cobra/io copying build/lib/cobra/io/dict.py -> build/bdist.linux-x86_64/wheel/./cobra/io copying build/lib/cobra/io/json.py -> build/bdist.linux-x86_64/wheel/./cobra/io copying build/lib/cobra/io/mat.py -> build/bdist.linux-x86_64/wheel/./cobra/io copying build/lib/cobra/io/sbml.py -> build/bdist.linux-x86_64/wheel/./cobra/io copying build/lib/cobra/io/yaml.py -> build/bdist.linux-x86_64/wheel/./cobra/io creating build/bdist.linux-x86_64/wheel/cobra/manipulation copying build/lib/cobra/manipulation/__init__.py -> build/bdist.linux-x86_64/wheel/./cobra/manipulation copying build/lib/cobra/manipulation/annotate.py -> build/bdist.linux-x86_64/wheel/./cobra/manipulation copying build/lib/cobra/manipulation/delete.py -> build/bdist.linux-x86_64/wheel/./cobra/manipulation copying build/lib/cobra/manipulation/modify.py -> build/bdist.linux-x86_64/wheel/./cobra/manipulation copying build/lib/cobra/manipulation/validate.py -> build/bdist.linux-x86_64/wheel/./cobra/manipulation creating build/bdist.linux-x86_64/wheel/cobra/medium copying build/lib/cobra/medium/__init__.py -> build/bdist.linux-x86_64/wheel/./cobra/medium copying build/lib/cobra/medium/annotations.py -> build/bdist.linux-x86_64/wheel/./cobra/medium copying build/lib/cobra/medium/minimal_medium.py -> build/bdist.linux-x86_64/wheel/./cobra/medium copying build/lib/cobra/medium/boundary_types.py -> build/bdist.linux-x86_64/wheel/./cobra/medium creating build/bdist.linux-x86_64/wheel/cobra/sampling copying build/lib/cobra/sampling/__init__.py -> build/bdist.linux-x86_64/wheel/./cobra/sampling copying build/lib/cobra/sampling/achr.py -> build/bdist.linux-x86_64/wheel/./cobra/sampling copying build/lib/cobra/sampling/core.py -> build/bdist.linux-x86_64/wheel/./cobra/sampling copying build/lib/cobra/sampling/hopsy.py -> build/bdist.linux-x86_64/wheel/./cobra/sampling copying build/lib/cobra/sampling/hr_sampler.py -> build/bdist.linux-x86_64/wheel/./cobra/sampling copying build/lib/cobra/sampling/optgp.py -> build/bdist.linux-x86_64/wheel/./cobra/sampling copying build/lib/cobra/sampling/sampling.py -> build/bdist.linux-x86_64/wheel/./cobra/sampling creating build/bdist.linux-x86_64/wheel/cobra/summary copying build/lib/cobra/summary/__init__.py -> build/bdist.linux-x86_64/wheel/./cobra/summary copying build/lib/cobra/summary/metabolite_summary.py -> build/bdist.linux-x86_64/wheel/./cobra/summary copying build/lib/cobra/summary/model_summary.py -> build/bdist.linux-x86_64/wheel/./cobra/summary copying build/lib/cobra/summary/reaction_summary.py -> build/bdist.linux-x86_64/wheel/./cobra/summary copying build/lib/cobra/summary/summary.py -> build/bdist.linux-x86_64/wheel/./cobra/summary creating build/bdist.linux-x86_64/wheel/cobra/util copying build/lib/cobra/util/__init__.py -> build/bdist.linux-x86_64/wheel/./cobra/util copying build/lib/cobra/util/array.py -> build/bdist.linux-x86_64/wheel/./cobra/util copying build/lib/cobra/util/context.py -> build/bdist.linux-x86_64/wheel/./cobra/util copying build/lib/cobra/util/process_pool.py -> build/bdist.linux-x86_64/wheel/./cobra/util copying build/lib/cobra/util/solver.py -> build/bdist.linux-x86_64/wheel/./cobra/util copying build/lib/cobra/util/util.py -> build/bdist.linux-x86_64/wheel/./cobra/util copying build/lib/cobra/__init__.py -> build/bdist.linux-x86_64/wheel/./cobra copying build/lib/cobra/exceptions.py -> build/bdist.linux-x86_64/wheel/./cobra running install_egg_info running egg_info writing src/cobra.egg-info/PKG-INFO writing dependency_links to src/cobra.egg-info/dependency_links.txt writing requirements to src/cobra.egg-info/requires.txt writing top-level names to src/cobra.egg-info/top_level.txt reading manifest file 'src/cobra.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE' writing manifest file 'src/cobra.egg-info/SOURCES.txt' Copying src/cobra.egg-info to build/bdist.linux-x86_64/wheel/./cobra-0.32.1-py3.14.egg-info running install_scripts creating build/bdist.linux-x86_64/wheel/cobra-0.32.1.dist-info/WHEEL creating '/builddir/build/BUILD/python-cobra-0.32.1-build/.pyproject-builddir/pip-wheel-q9ncbldp/.tmp-voxg82vw/cobra-0.32.1-py2.py3-none-any.whl' and adding 'build/bdist.linux-x86_64/wheel' to it adding 'cobra/__init__.py' adding 'cobra/exceptions.py' adding 'cobra/core/__init__.py' adding 'cobra/core/configuration.py' adding 'cobra/core/dictlist.py' adding 'cobra/core/formula.py' adding 'cobra/core/gene.py' adding 'cobra/core/group.py' adding 'cobra/core/metabolite.py' adding 'cobra/core/model.py' adding 'cobra/core/object.py' adding 'cobra/core/reaction.py' adding 'cobra/core/singleton.py' adding 'cobra/core/solution.py' adding 'cobra/core/species.py' adding 'cobra/data/__init__.py' adding 'cobra/data/iJO1366.xml.gz' adding 'cobra/data/mini.json' adding 'cobra/data/mini.mat' adding 'cobra/data/mini.yml' adding 'cobra/data/mini_cobra.xml' adding 'cobra/data/salmonella.xml.gz' adding 'cobra/data/textbook.xml.gz' adding 'cobra/flux_analysis/__init__.py' adding 'cobra/flux_analysis/deletion.py' adding 'cobra/flux_analysis/fast_snp.py' adding 'cobra/flux_analysis/fastcc.py' adding 'cobra/flux_analysis/find_cyclic_reactions.py' adding 'cobra/flux_analysis/gapfilling.py' adding 'cobra/flux_analysis/geometric.py' adding 'cobra/flux_analysis/helpers.py' adding 'cobra/flux_analysis/loopless.py' adding 'cobra/flux_analysis/moma.py' adding 'cobra/flux_analysis/parsimonious.py' adding 'cobra/flux_analysis/phenotype_phase_plane.py' adding 'cobra/flux_analysis/reaction.py' adding 'cobra/flux_analysis/room.py' adding 'cobra/flux_analysis/variability.py' adding 'cobra/io/__init__.py' adding 'cobra/io/dict.py' adding 'cobra/io/json.py' adding 'cobra/io/mat.py' adding 'cobra/io/sbml.py' adding 'cobra/io/schema_v1.json' adding 'cobra/io/yaml.py' adding 'cobra/io/web/__init__.py' adding 'cobra/io/web/abstract_model_repository.py' adding 'cobra/io/web/bigg_models_repository.py' adding 'cobra/io/web/biomodels_repository.py' adding 'cobra/io/web/cobrapy_repository.py' adding 'cobra/io/web/load.py' adding 'cobra/manipulation/__init__.py' adding 'cobra/manipulation/annotate.py' adding 'cobra/manipulation/delete.py' adding 'cobra/manipulation/modify.py' adding 'cobra/manipulation/validate.py' adding 'cobra/medium/__init__.py' adding 'cobra/medium/annotations.py' adding 'cobra/medium/boundary_types.py' adding 'cobra/medium/minimal_medium.py' adding 'cobra/sampling/__init__.py' adding 'cobra/sampling/achr.py' adding 'cobra/sampling/core.py' adding 'cobra/sampling/hopsy.py' adding 'cobra/sampling/hr_sampler.py' adding 'cobra/sampling/optgp.py' adding 'cobra/sampling/sampling.py' adding 'cobra/summary/__init__.py' adding 'cobra/summary/metabolite_summary.py' adding 'cobra/summary/model_summary.py' adding 'cobra/summary/reaction_summary.py' adding 'cobra/summary/summary.py' adding 'cobra/util/__init__.py' adding 'cobra/util/array.py' adding 'cobra/util/context.py' adding 'cobra/util/process_pool.py' adding 'cobra/util/solver.py' adding 'cobra/util/util.py' adding 'cobra-0.32.1.dist-info/licenses/LICENSE' adding 'cobra-0.32.1.dist-info/METADATA' adding 'cobra-0.32.1.dist-info/WHEEL' adding 'cobra-0.32.1.dist-info/top_level.txt' adding 'cobra-0.32.1.dist-info/zip-safe' adding 'cobra-0.32.1.dist-info/RECORD' removing build/bdist.linux-x86_64/wheel Building wheel for cobra (pyproject.toml): finished with status 'done' Created wheel for cobra: filename=cobra-0.32.1-py2.py3-none-any.whl size=1202090 sha256=e6f0f856aa4a6b79162760e63c05e260312c03a795fd24c9ed1ae413a3222740 Stored in directory: /builddir/.cache/pip/wheels/87/d7/74/91b24d0529763f8d8b9b8e51bf951448f736e637898d849d90 Successfully built cobra + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.BLqpgz + umask 022 + cd /builddir/build/BUILD/python-cobra-0.32.1-build + '[' /builddir/build/BUILD/python-cobra-0.32.1-build/BUILDROOT '!=' / ']' + rm -rf /builddir/build/BUILD/python-cobra-0.32.1-build/BUILDROOT ++ dirname /builddir/build/BUILD/python-cobra-0.32.1-build/BUILDROOT + mkdir -p /builddir/build/BUILD/python-cobra-0.32.1-build + mkdir /builddir/build/BUILD/python-cobra-0.32.1-build/BUILDROOT + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd cobrapy-0.32.1 ++ ls /builddir/build/BUILD/python-cobra-0.32.1-build/pyproject-wheeldir/cobra-0.32.1-py2.py3-none-any.whl ++ xargs basename --multiple ++ sed -E 's/([^-]+)-([^-]+)-.+\.whl/\1==\2/' + specifier=cobra==0.32.1 + '[' -z cobra==0.32.1 ']' + PIP_CONFIG_FILE=/dev/null + TMPDIR=/builddir/build/BUILD/python-cobra-0.32.1-build/.pyproject-builddir + /usr/bin/python3 -m pip install --root /builddir/build/BUILD/python-cobra-0.32.1-build/BUILDROOT --prefix /usr --no-deps --disable-pip-version-check --progress-bar off --verbose --ignore-installed --no-warn-script-location --no-index --no-cache-dir --find-links /builddir/build/BUILD/python-cobra-0.32.1-build/pyproject-wheeldir cobra==0.32.1 Using pip 25.1.1 from /usr/lib/python3.14/site-packages/pip (python 3.14) Looking in links: /builddir/build/BUILD/python-cobra-0.32.1-build/pyproject-wheeldir Processing /builddir/build/BUILD/python-cobra-0.32.1-build/pyproject-wheeldir/cobra-0.32.1-py2.py3-none-any.whl Installing collected packages: cobra Successfully installed cobra-0.32.1 + '[' -d /builddir/build/BUILD/python-cobra-0.32.1-build/BUILDROOT/usr/bin ']' + rm -f /builddir/build/BUILD/python-cobra-0.32.1-build/python-cobra-0.32.1-2.fc43.x86_64-pyproject-ghost-distinfo + site_dirs=() + '[' -d /builddir/build/BUILD/python-cobra-0.32.1-build/BUILDROOT/usr/lib/python3.14/site-packages ']' + site_dirs+=("/usr/lib/python3.14/site-packages") + '[' /builddir/build/BUILD/python-cobra-0.32.1-build/BUILDROOT/usr/lib64/python3.14/site-packages '!=' /builddir/build/BUILD/python-cobra-0.32.1-build/BUILDROOT/usr/lib/python3.14/site-packages ']' + '[' -d /builddir/build/BUILD/python-cobra-0.32.1-build/BUILDROOT/usr/lib64/python3.14/site-packages ']' + for site_dir in ${site_dirs[@]} + for distinfo in /builddir/build/BUILD/python-cobra-0.32.1-build/BUILDROOT$site_dir/*.dist-info + echo '%ghost %dir /usr/lib/python3.14/site-packages/cobra-0.32.1.dist-info' +++ basename /builddir/build/BUILD/python-cobra-0.32.1-build/BUILDROOT/usr/lib/python3.14/site-packages/cobra-0.32.1.dist-info ++ PYTHONPATH=/usr/lib/rpm/redhat ++ /usr/bin/python3 -sBc 'import sys; from pyproject_save_files import canonical_name_from_distinfo; print(canonical_name_from_distinfo(sys.argv[1]))' cobra-0.32.1.dist-info + _normalized=cobra + echo '%ghost %dir /usr/lib/python3.14/site-packages/cobra-0.32.1.dist-info' + sed -i s/pip/rpm/ /builddir/build/BUILD/python-cobra-0.32.1-build/BUILDROOT/usr/lib/python3.14/site-packages/cobra-0.32.1.dist-info/INSTALLER + PYTHONPATH=/usr/lib/rpm/redhat + /usr/bin/python3 -B /usr/lib/rpm/redhat/pyproject_preprocess_record.py --buildroot /builddir/build/BUILD/python-cobra-0.32.1-build/BUILDROOT --record /builddir/build/BUILD/python-cobra-0.32.1-build/BUILDROOT/usr/lib/python3.14/site-packages/cobra-0.32.1.dist-info/RECORD --output /builddir/build/BUILD/python-cobra-0.32.1-build/python-cobra-0.32.1-2.fc43.x86_64-pyproject-record + rm -fv /builddir/build/BUILD/python-cobra-0.32.1-build/BUILDROOT/usr/lib/python3.14/site-packages/cobra-0.32.1.dist-info/RECORD removed '/builddir/build/BUILD/python-cobra-0.32.1-build/BUILDROOT/usr/lib/python3.14/site-packages/cobra-0.32.1.dist-info/RECORD' + rm -fv /builddir/build/BUILD/python-cobra-0.32.1-build/BUILDROOT/usr/lib/python3.14/site-packages/cobra-0.32.1.dist-info/REQUESTED removed '/builddir/build/BUILD/python-cobra-0.32.1-build/BUILDROOT/usr/lib/python3.14/site-packages/cobra-0.32.1.dist-info/REQUESTED' + '[' -f /builddir/build/BUILD/python-cobra-0.32.1-build/python-cobra-0.32.1-2.fc43.x86_64-pyproject-dep-overrides ']' ++ wc -l /builddir/build/BUILD/python-cobra-0.32.1-build/python-cobra-0.32.1-2.fc43.x86_64-pyproject-ghost-distinfo ++ cut -f1 '-d ' + lines=1 + '[' 1 -ne 1 ']' + RPM_FILES_ESCAPE=4.19 + /usr/bin/python3 /usr/lib/rpm/redhat/pyproject_save_files.py --output-files /builddir/build/BUILD/python-cobra-0.32.1-build/python-cobra-0.32.1-2.fc43.x86_64-pyproject-files --output-modules /builddir/build/BUILD/python-cobra-0.32.1-build/python-cobra-0.32.1-2.fc43.x86_64-pyproject-modules --buildroot /builddir/build/BUILD/python-cobra-0.32.1-build/BUILDROOT --sitelib /usr/lib/python3.14/site-packages --sitearch /usr/lib64/python3.14/site-packages --python-version 3.14 --pyproject-record /builddir/build/BUILD/python-cobra-0.32.1-build/python-cobra-0.32.1-2.fc43.x86_64-pyproject-record --prefix /usr -l cobra + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/brp-strip /usr/bin/strip + /usr/lib/rpm/brp-strip-comment-note /usr/bin/strip /usr/bin/objdump + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs + /usr/lib/rpm/brp-remove-la-files + /usr/lib/rpm/redhat/brp-python-rpm-in-distinfo + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j4 Bytecompiling .py files below /builddir/build/BUILD/python-cobra-0.32.1-build/BUILDROOT/usr/lib/python3.14 using python3.14 + /usr/lib/rpm/redhat/brp-python-hardlink + /usr/bin/add-determinism --brp -j4 /builddir/build/BUILD/python-cobra-0.32.1-build/BUILDROOT /builddir/build/BUILD/python-cobra-0.32.1-build/BUILDROOT/usr/lib/python3.14/site-packages/cobra/__pycache__/__init__.cpython-314.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/python-cobra-0.32.1-build/BUILDROOT/usr/lib/python3.14/site-packages/cobra/__pycache__/exceptions.cpython-314.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/python-cobra-0.32.1-build/BUILDROOT/usr/lib/python3.14/site-packages/cobra/util/__pycache__/util.cpython-314.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/python-cobra-0.32.1-build/BUILDROOT/usr/lib/python3.14/site-packages/cobra/util/__pycache__/context.cpython-314.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/python-cobra-0.32.1-build/BUILDROOT/usr/lib/python3.14/site-packages/cobra/util/__pycache__/__init__.cpython-314.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/python-cobra-0.32.1-build/BUILDROOT/usr/lib/python3.14/site-packages/cobra/util/__pycache__/process_pool.cpython-314.opt-1.pyc: rewriting with normalized contents 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/builddir/build/BUILD/python-cobra-0.32.1-build/BUILDROOT/usr/lib/python3.14/site-packages/cobra/core/__pycache__/reaction.cpython-314.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/python-cobra-0.32.1-build/BUILDROOT/usr/lib/python3.14/site-packages/cobra/core/__pycache__/__init__.cpython-314.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/python-cobra-0.32.1-build/BUILDROOT/usr/lib/python3.14/site-packages/cobra/core/__pycache__/configuration.cpython-314.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-cobra-0.32.1-build/BUILDROOT/usr/lib/python3.14/site-packages/cobra/core/__pycache__/configuration.cpython-314.pyc: replacing with normalized version /builddir/build/BUILD/python-cobra-0.32.1-build/BUILDROOT/usr/lib/python3.14/site-packages/cobra/core/__pycache__/model.cpython-314.opt-1.pyc: rewriting with normalized contents Scanned 29 directories and 224 files, processed 74 inodes, 71 modified (2 replaced + 69 rewritten), 0 unsupported format, 0 errors Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.gsTjWf + umask 022 + cd /builddir/build/BUILD/python-cobra-0.32.1-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd cobrapy-0.32.1 + /usr/bin/python3 -c 'import sys; sys.exit(0 if sys.version_info >= (3, 15) else 1)' + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + PATH=/builddir/build/BUILD/python-cobra-0.32.1-build/BUILDROOT/usr/bin:/usr/bin:/bin:/usr/sbin:/sbin + PYTHONPATH=/builddir/build/BUILD/python-cobra-0.32.1-build/BUILDROOT/usr/lib64/python3.14/site-packages:/builddir/build/BUILD/python-cobra-0.32.1-build/BUILDROOT/usr/lib/python3.14/site-packages + PYTHONDONTWRITEBYTECODE=1 + PYTEST_ADDOPTS=' --ignore=/builddir/build/BUILD/python-cobra-0.32.1-build/.pyproject-builddir' + PYTEST_XDIST_AUTO_NUM_WORKERS=4 + /usr/bin/pytest -q tests --benchmark-skip --deselect tests/test_io/test_web/test_load.py::test_remote_load ................sssss.sss...................................x........... 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[100%] =============================== warnings summary =============================== tests/test_core/test_gpr.py::test_and_gpr[a AND b-2-gpr_genes2-a and b] tests/test_core/test_gpr.py::test_gpr_equality_with_bolean_logic[a_and_b_strs] tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists0] tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists1] tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists2] tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists3] /builddir/build/BUILD/python-cobra-0.32.1-build/BUILDROOT/usr/lib/python3.14/site-packages/cobra/core/gene.py:358: SyntaxWarning: Uppercase AND/OR found in rule 'a AND b'. warn( tests/test_core/test_gpr.py::test_or_gpr[a OR b-2-gpr_genes2-a or b] tests/test_core/test_gpr.py::test_gpr_as_symbolic_boolean[a OR b-symbolic_gpr2] tests/test_core/test_gpr.py::test_gpr_equality_with_bolean_logic[a_or_b_strs] tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists0] tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists4] tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists5] tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists6] tests/test_core/test_gpr.py::test_gpr_from_symbolic[a OR b-symbolic_gpr5] /builddir/build/BUILD/python-cobra-0.32.1-build/BUILDROOT/usr/lib/python3.14/site-packages/cobra/core/gene.py:358: SyntaxWarning: Uppercase AND/OR found in rule 'a OR b'. warn( tests/test_core/test_gpr.py::test_complicated_gpr[(a OR b) AND c] tests/test_core/test_gpr.py::test_gpr_as_symbolic_boolean[(a OR b) AND c-symbolic_gpr6] tests/test_core/test_gpr.py::test_gpr_equality_with_bolean_logic[a_b_c_or_and_strs] tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists3] tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists6] tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists8] tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists9] tests/test_core/test_gpr.py::test_gpr_from_symbolic[(a OR b) AND c-symbolic_gpr9] /builddir/build/BUILD/python-cobra-0.32.1-build/BUILDROOT/usr/lib/python3.14/site-packages/cobra/core/gene.py:358: SyntaxWarning: Uppercase AND/OR found in rule '(a OR b) AND c'. warn( tests/test_core/test_gpr.py::test_gpr_that_needs_two_replacements /builddir/build/BUILD/python-cobra-0.32.1-build/BUILDROOT/usr/lib/python3.14/site-packages/cobra/core/gene.py:358: SyntaxWarning: Uppercase AND/OR found in rule '(591001.3.peg.1891 AND 591001.3.peg.1892 AND 591001.3.peg.1893)'. warn( tests/test_core/test_gpr.py::test_gpr_equality_with_bolean_logic[a_and_b_strs] tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists0] tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists1] tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists2] tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists3] /builddir/build/BUILD/python-cobra-0.32.1-build/BUILDROOT/usr/lib/python3.14/site-packages/cobra/core/gene.py:358: SyntaxWarning: Uppercase AND/OR found in rule 'b AND a'. warn( tests/test_core/test_gpr.py::test_gpr_equality_with_bolean_logic[a_or_b_strs] tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists0] tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists4] tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists5] tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists6] /builddir/build/BUILD/python-cobra-0.32.1-build/BUILDROOT/usr/lib/python3.14/site-packages/cobra/core/gene.py:358: SyntaxWarning: Uppercase AND/OR found in rule 'b OR a'. warn( tests/test_core/test_gpr.py::test_gpr_equality_with_bolean_logic[a_b_c_or_strs] tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists1] tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists4] tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists7] tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists8] /builddir/build/BUILD/python-cobra-0.32.1-build/BUILDROOT/usr/lib/python3.14/site-packages/cobra/core/gene.py:358: SyntaxWarning: Uppercase AND/OR found in rule 'a OR b or c'. warn( tests/test_core/test_gpr.py::test_gpr_equality_with_bolean_logic[a_b_c_and_strs] tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists2] tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists5] tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists7] tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists9] /builddir/build/BUILD/python-cobra-0.32.1-build/BUILDROOT/usr/lib/python3.14/site-packages/cobra/core/gene.py:358: SyntaxWarning: Uppercase AND/OR found in rule 'a AND b and c'. warn( tests/test_core/test_model.py::test_reaction_delete tests/test_core/test_model.py::test_reaction_delete /builddir/build/BUILD/python-cobra-0.32.1-build/BUILDROOT/usr/lib/python3.14/site-packages/cobra/core/reaction.py:852: DeprecationWarning: delete is deprecated. Use reaction.remove_from_model instead warn( tests/test_core/test_model.py::test_group_loss_of_elements tests/test_flux_analysis/test_fastcc.py::test_fastcc_against_nonblocked_rxns_large tests/test_flux_analysis/test_gapfilling.py::test_gapfilling /builddir/build/BUILD/python-cobra-0.32.1-build/BUILDROOT/usr/lib/python3.14/site-packages/cobra/core/group.py:147: UserWarning: need to pass in a list warn("need to pass in a list") tests/test_core/test_model.py::test_change_objective tests/test_core/test_model.py::test_change_objective tests/test_core/test_model.py::test_change_objective /builddir/build/BUILD/python-cobra-0.32.1-build/BUILDROOT/usr/lib/python3.14/site-packages/cobra/core/reaction.py:734: DeprecationWarning: Please use reaction.flux instead. warn("Please use reaction.flux instead.", DeprecationWarning) tests/test_flux_analysis/test_gapfilling.py: 980 warnings /builddir/build/BUILD/python-cobra-0.32.1-build/cobrapy-0.32.1/tests/conftest.py:53: DeprecationWarning: BoolOp.__init__ missing 1 required positional argument: 'op'. This will become an error in Python 3.15. return _load(infile) tests/test_flux_analysis/test_gapfilling.py: 4020 warnings /builddir/build/BUILD/python-cobra-0.32.1-build/cobrapy-0.32.1/tests/conftest.py:53: DeprecationWarning: Name.__init__ missing 1 required positional argument: 'id'. This will become an error in Python 3.15. return _load(infile) tests/test_io/test_json.py: 34 warnings tests/test_io/test_mat.py: 34 warnings tests/test_io/test_pickle.py: 34 warnings tests/test_io/test_yaml.py: 34 warnings /builddir/build/BUILD/python-cobra-0.32.1-build/cobrapy-0.32.1/tests/test_io/conftest.py:17: DeprecationWarning: Name.__init__ missing 1 required positional argument: 'id'. This will become an error in Python 3.15. return load(infile) tests/test_io/test_json.py: 11 warnings tests/test_io/test_mat.py: 11 warnings tests/test_io/test_pickle.py: 11 warnings tests/test_io/test_yaml.py: 11 warnings /builddir/build/BUILD/python-cobra-0.32.1-build/cobrapy-0.32.1/tests/test_io/conftest.py:17: DeprecationWarning: BoolOp.__init__ missing 1 required positional argument: 'op'. This will become an error in Python 3.15. return load(infile) tests/test_io/test_json.py: 1 warning tests/test_io/test_mat.py: 5 warnings tests/test_io/test_pickle.py: 1 warning tests/test_io/test_sbml.py: 9 warnings tests/test_io/test_yaml.py: 1 warning /builddir/build/BUILD/python-cobra-0.32.1-build/BUILDROOT/usr/lib/python3.14/site-packages/cobra/util/solver.py:554: UserWarning: Solver status is 'infeasible'. warn(f"Solver status is '{status}'.", UserWarning) tests/test_io/test_mat.py::test_load_matlab_model[raven_model-data_directory-raven.mat] tests/test_io/test_mat.py::test_save_matlab_model[raven_model-raven.mat] /builddir/build/BUILD/python-cobra-0.32.1-build/cobrapy-0.32.1/tests/test_io/test_mat.py:26: DeprecationWarning: BoolOp.__init__ missing 1 required positional argument: 'op'. This will become an error in Python 3.15. return load(infile) tests/test_io/test_mat.py::test_load_matlab_model[raven_model-data_directory-raven.mat] tests/test_io/test_mat.py::test_load_matlab_model[raven_model-data_directory-raven.mat] tests/test_io/test_mat.py::test_load_matlab_model[raven_model-data_directory-raven.mat] tests/test_io/test_mat.py::test_save_matlab_model[raven_model-raven.mat] tests/test_io/test_mat.py::test_save_matlab_model[raven_model-raven.mat] tests/test_io/test_mat.py::test_save_matlab_model[raven_model-raven.mat] /builddir/build/BUILD/python-cobra-0.32.1-build/cobrapy-0.32.1/tests/test_io/test_mat.py:26: DeprecationWarning: Name.__init__ missing 1 required positional argument: 'id'. This will become an error in Python 3.15. return load(infile) tests/test_io/test_pickle.py: 34 warnings /builddir/build/BUILD/python-cobra-0.32.1-build/cobrapy-0.32.1/tests/test_io/test_pickle.py:24: DeprecationWarning: Name.__init__ missing 1 required positional argument: 'id'. This will become an error in Python 3.15. pickle_model = load_function(infile) tests/test_io/test_pickle.py: 11 warnings /builddir/build/BUILD/python-cobra-0.32.1-build/cobrapy-0.32.1/tests/test_io/test_pickle.py:24: DeprecationWarning: BoolOp.__init__ missing 1 required positional argument: 'op'. This will become an error in Python 3.15. pickle_model = load_function(infile) tests/test_io/test_sbml.py: 136 warnings /builddir/build/BUILD/python-cobra-0.32.1-build/cobrapy-0.32.1/tests/test_io/test_sbml.py:268: DeprecationWarning: Name.__init__ missing 1 required positional argument: 'id'. This will become an error in Python 3.15. reference_model = load(infile) tests/test_io/test_sbml.py: 44 warnings /builddir/build/BUILD/python-cobra-0.32.1-build/cobrapy-0.32.1/tests/test_io/test_sbml.py:268: DeprecationWarning: BoolOp.__init__ missing 1 required positional argument: 'op'. This will become an error in Python 3.15. reference_model = load(infile) tests/test_sampling/test_sampling.py::test_single_point_space /builddir/build/BUILD/python-cobra-0.32.1-build/BUILDROOT/usr/lib/python3.14/site-packages/cobra/sampling/sampling.py:138: DeprecationWarning: The 'warn' method is deprecated, use 'warning' instead logger.warn( tests/test_util/test_process_pool.py::test_with_context /builddir/build/BUILD/python-cobra-0.32.1-build/BUILDROOT/usr/lib/python3.14/site-packages/cobra/util/process_pool.py:71: PytestMockWarning: Mocks returned by pytest-mock do not need to be used as context managers. The mocker fixture automatically undoes mocking at the end of a test. This warning can be ignored if it was triggered by mocking a context manager. https://pytest-mock.readthedocs.io/en/latest/usage.html#usage-as-context-manager self._pool.__enter__() -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html 498 passed, 69 skipped, 2 deselected, 9 xfailed, 5483 warnings in 132.76s (0:02:12) + RPM_EC=0 ++ jobs -p + exit 0 Processing files: python3-cobra-0.32.1-2.fc43.noarch Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.CiYxHc + umask 022 + cd /builddir/build/BUILD/python-cobra-0.32.1-build + cd cobrapy-0.32.1 + DOCDIR=/builddir/build/BUILD/python-cobra-0.32.1-build/BUILDROOT/usr/share/doc/python3-cobra + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILD/python-cobra-0.32.1-build/BUILDROOT/usr/share/doc/python3-cobra + cp -pr /builddir/build/BUILD/python-cobra-0.32.1-build/cobrapy-0.32.1/README.rst /builddir/build/BUILD/python-cobra-0.32.1-build/BUILDROOT/usr/share/doc/python3-cobra + cp -pr /builddir/build/BUILD/python-cobra-0.32.1-build/cobrapy-0.32.1/INSTALL.rst /builddir/build/BUILD/python-cobra-0.32.1-build/BUILDROOT/usr/share/doc/python3-cobra + RPM_EC=0 ++ jobs -p + exit 0 Provides: python-cobra = 0.32.1-2.fc43 python3-cobra = 0.32.1-2.fc43 python3.14-cobra = 0.32.1-2.fc43 python3.14dist(cobra) = 0.32.1 python3dist(cobra) = 0.32.1 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: (python3.14dist(appdirs) >= 1.4 with python3.14dist(appdirs) < 2) (python3.14dist(depinfo) >= 2.2 with python3.14dist(depinfo) < 3) (python3.14dist(httpx) >= 0.24 with python3.14dist(httpx) < 1) (python3.14dist(optlang) >= 1.9 with python3.14dist(optlang) < 2) (python3.14dist(ruamel-yaml) >= 0.16 with python3.14dist(ruamel-yaml) < 1) python(abi) = 3.14 python3.14dist(numpy) >= 1.13 python3.14dist(pandas) >= 1 python3.14dist(pydantic) >= 1.6 python3.14dist(rich) >= 8 python3.14dist(swiglpk) Recommends: python3-scipy Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILD/python-cobra-0.32.1-build/BUILDROOT Wrote: /builddir/build/SRPMS/python-cobra-0.32.1-2.fc43.src.rpm Wrote: /builddir/build/RPMS/python3-cobra-0.32.1-2.fc43.noarch.rpm Finish: rpmbuild python-cobra-0.32.1-2.fc43.src.rpm Finish: build phase for python-cobra-0.32.1-2.fc43.src.rpm INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-43-x86_64-1792953521.519929/root/var/log/dnf5.log INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz /bin/tar: Removing leading `/' from member names INFO: Done(/var/lib/copr-rpmbuild/results/python-cobra-0.32.1-2.fc43.src.rpm) Config(child) 2 minutes 35 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool Package info: { "packages": [ { "name": "python3-cobra", "epoch": null, "version": "0.32.1", "release": "2.fc43", "arch": "noarch" }, { "name": "python-cobra", "epoch": null, "version": "0.32.1", "release": "2.fc43", "arch": "src" } ] } RPMResults finished