implemention class, hide all details here. More...

Public Member Functions
	RoadRunnerImpl (const std::string &uriOrSBML, const Dictionary *dict)

	RoadRunnerImpl (const std::string &_compiler, const std::string &_tempDir, const std::string &_supportCodeDir)

	RoadRunnerImpl (const RoadRunnerImpl &rri)

void	deleteAllSolvers ()

void	syncAllSolversWithModel (ExecutableModel *m)

void	setParameterValue (const ParameterType parameterType, const int parameterIndex, const double value)

double	getParameterValue (const ParameterType parameterType, const int parameterIndex)

void	changeParameter (ParameterType parameterType, int reactionIndex, int parameterIndex, double originalValue, double increment)

bool	isCompleteFBC ()

Public Attributes
int	mInstanceID

ls::DoubleMatrix	simulationResult

Integrator *	integrator = nullptr
	Points to the current integrator. More...

std::vector< Integrator * >	integrators

SteadyStateSolver *	steady_state_solver = nullptr
	Points to the current steady state solver.

std::vector< SteadyStateSolver * >	steady_state_solvers

SensitivitySolver *	sensitivity_solver = nullptr
	Points to the current sensitivities solver.

std::vector< SensitivitySolver * >	sensitivity_solvers

std::vector< SelectionRecord >	mSelectionList

LoadSBMLOptions	loadOpt
	ModelGenerator obtained from the factory.

std::vector< SelectionRecord >	mSteadyStateSelection

Compiler *	compiler
	here for compatiblity, will go.

ls::LibStructural *	mLS
	structural analysis library.

SimulateOptions	simulateOpt
	options that are specific to the simulation

RoadRunnerOptions	roadRunnerOptions
	various general options that can be modified by external callers.

std::string	configurationXML
	the xml std::string that is given in setConfigurationXML. More...

bool	simulatedSinceReset = false

friend	RoadRunner

Protected Attributes
std::unique_ptr< ExecutableModel >	model

std::unique_ptr< libsbml::SBMLDocument >	document

Detailed Description

implemention class, hide all details here.

Member Data Documentation

std::string rr::RoadRunnerImpl::configurationXML

the xml std::string that is given in setConfigurationXML.

Needed because the NLEQ is only created in the steadyState method.

Integrator* rr::RoadRunnerImpl::integrator = nullptr

Points to the current integrator.

This is a pointer into the integrators array.

The documentation for this class was generated from the following file: