| ► c | |
| mtrand.h | |
| rrCCompiler.h | |
| rrCModelDataUtil.h | |
| rrCModelGenerator.h | |
| rrCodeBuilder.h | |
| rrCodeTypes.h | |
| rrCompiledExecutableModel.h | |
| rrCompiledModelGenerator.h | |
| rrCompiledModelState.h | |
| rrEvent.h | |
| rrHashTable.h | |
| rrModelData.h | |
| rrModelSharedLibrary.h | |
| rrModelSymbols.h | |
| rrNOMSupport.h | |
| rrPendingAssignment.h | |
| rrRandom.h | |
| rrRule.h | |
| rrSBMLSymbol.h | |
| rrSBMLSymbolDependencies.h | |
| rrScanner.h | |
| rrStringBuilder.h | |
| rrStringList.h | |
| rrStringListContainer.h | |
| rrSymbol.h | |
| rrSymbolList.h | |
| rrToken.h | |
| ► llvm | |
| AssignmentRuleEvaluator.h | |
| ASTNodeCodeGen.h | |
| ASTNodeFactory.h | |
| CodeGen.h | |
| CodeGenBase.h | |
| EvalConversionFactorCodeGen.h | |
| EvalInitialConditionsCodeGen.h | |
| EvalRateRuleRatesCodeGen.h | |
| EvalReactionRatesCodeGen.h | |
| EvalVolatileStoichCodeGen.h | |
| EventAssignCodeGen.h | |
| EventCodeGenBase.h | |
| EventQueue.h | |
| EventTriggerCodeGen.h | |
| FunctionResolver.h | |
| GetEventValuesCodeGen.h | |
| GetInitialValueCodeGenBase.h | |
| GetInitialValuesCodeGen.h | |
| GetPiecewiseTriggerCodeGen.h | |
| GetValueCodeGenBase.h | |
| GetValuesCodeGen.h | |
| Jit.h | |
| JitFactory.h | |
| KineticLawParameterResolver.h | |
| LLJit.h | |
| LLVMCompiler.h | |
| LLVMException.h | |
| LLVMExecutableModel.h | LLVM executable model interface |
| LLVMIncludes.h | |
| LLVMModelData.h | |
| LLVMModelDataSymbols.h | |
| LLVMModelGenerator.h | |
| LLVMModelSymbols.h | |
| LoadSymbolResolverBase.h | |
| MCJit.h | |
| ModelDataIRBuilder.h | |
| ModelDataSymbolResolver.h | |
| ModelGeneratorContext.h | |
| ModelInitialValueSymbolResolver.h | |
| ModelResourceProvider.h | |
| ModelResources.h | |
| Random.h | |
| SBMLInitialValueSymbolResolver.h | |
| SBMLModelObjectCache.h | |
| SBMLSupportFunctions.h | |
| SetInitialValueCodeGenBase.h | |
| SetInitialValuesCodeGen.h | |
| SetValueCodeGenBase.h | |
| SetValuesCodeGen.h | |
| SymbolForest.h | |
| ► wrappers | |
| ► C | |
| rrArrayList.h | |
| rrArrayListItem.h | |
| rrArrayListItemBase.h | |
| rrc_api.cpp | RoadRunner C wrappers 2012 |
| rrc_api.h | LibRoadRunner C wrappers 2012-2013 |
| rrc_cpp_support.h | RoadRunner C wrappers 2012 |
| rrc_exporter.h | RoadRunner C wrappers 2012 |
| rrc_libstruct_api.h | RoadRunner C wrappers 2012 |
| rrc_logging_api.h | RoadRunner C wrappers 2012 |
| rrc_macros.h | RoadRunner C wrappers 2012 |
| rrc_nom_api.h | RoadRunner C wrappers 2012 |
| rrc_pch.h | |
| rrc_types.h | RoadRunner C wrappers 2012 |
| rrc_utilities.h | RoadRunner C wrappers 2012 |
| rrcStringList.h | |
| _Variant.h | |
| ApproxSteadyStateDecorator.h | |
| BasicNewtonIteration.h | |
| CVODEIntegrator.h | Contains the RoadRunner CVODE integrator interface |
| Dictionary.h | |
| DoxygenDocs.h | |
| EulerIntegrator.h | |
| ExecutableModelFactory.h | |
| FixedPointIteration.h | |
| ForwardSensitivitySolver.h | |
| GillespieIntegrator.h | |
| GitInfo.h | |
| Integrator.cpp | Contains the base class for RoadRunner integrators |
| Integrator.h | RoadRunner's Gillespie SSA integrator |
| IntegratorFactory.h | |
| KinsolErrHandler.h | |
| KinsolSteadyStateSolver.h | |
| LinesearchNewtonIteration.h | |
| Matrix.h | |
| Matrix3D.h | |
| msc_stdint.h | |
| NewtonIteration.h | |
| NLEQ1Solver.h | Provides an interface to NLEQ1 |
| NLEQ2Solver.h | Provides an interface to NLEQ |
| NLEQSolver.h | |
| PresimulationDecorator.h | |
| PresimulationProgramDecorator.h | |
| Registrable.h | |
| RegistrationFactory.h | |
| RK45Integrator.h | A Runge-Kutta Fehlberg method for roadrunner |
| RK4Integrator.h | |
| rr_pch.h | |
| rrCompiler.h | |
| rrConfig.h | |
| rrConfigure.h | |
| rrConstants.h | |
| rrException.h | |
| rrExecutableModel.h | Base class for all code generators in RoadRunner |
| rrExporter.h | |
| rrFileName.h | |
| rrGetOptions.h | |
| rrIniFile.h | |
| rrIniKey.h | |
| rrIniSection.h | |
| rrLogger.h | |
| rrNLEQ1Interface.h | |
| rrNLEQ2Interface.h | |
| rrOSSpecifics.h | |
| rrRoadRunner.h | |
| rrRoadRunnerData.h | |
| rrRoadRunnerMap.h | |
| rrRoadRunnerOptions.h | |
| rrSBMLModelSimulation.h | |
| rrSBMLReader.h | |
| rrSelectionRecord.h | |
| rrSparse.h | |
| rrStringUtils.h | |
| rrTestSuiteModelSimulation.h | |
| rrUtils.h | |
| SBMLValidator.h | |
| SensitivitySolver.h | |
| SensitivitySolverFactory.h | |
| Setting.h | |
| setting_t.h | |
| Solver.h | Contains the base class for RoadRunner solvers |
| SteadyStateSolver.cpp | Contains the base class for RoadRunner SteadyStateSolvers |
| SteadyStateSolver.h | Contains the base class for RoadRunner solvers |
| SteadyStateSolverDecorator.h | |
| SteadyStateSolverFactory.h | |
| SVD.h | |
