Warning: Permanently added '54.208.173.152' (ED25519) to the list of known hosts.

You can reproduce this build on your computer by running:

  sudo dnf install copr-rpmbuild
  /usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/11091860-fedora-43-x86_64 --chroot fedora-43-x86_64


Version: 1.10
PID: 11870
Logging PID: 11872
Task:
{'allow_user_ssh': False,
 'appstream': False,
 'background': False,
 'build_id': 11091860,
 'buildroot_pkgs': [],
 'chroot': 'fedora-43-x86_64',
 'enable_net': False,
 'fedora_review': False,
 'git_hash': 'e14d642226bc8654954d7f15ab1df90caa35d36a',
 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/mhough/neurofedora/conglomerate',
 'isolation': 'default',
 'memory_reqs': 2048,
 'package_name': 'conglomerate',
 'package_version': '1.6.80-1.20120308git166303d',
 'project_dirname': 'neurofedora',
 'project_name': 'neurofedora',
 'project_owner': 'mhough',
 'repo_priority': None,
 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/mhough/neurofedora/fedora-43-x86_64/',
            'id': 'copr_base',
            'name': 'Copr repository',
            'priority': None,
            'repo_gpgcheck': False}],
 'sandbox': 'mhough/neurofedora--mhough',
 'source_json': {},
 'source_type': None,
 'ssh_public_keys': None,
 'storage': 0,
 'submitter': 'mhough',
 'tags': [],
 'task_id': '11091860-fedora-43-x86_64',
 'timeout': 86400,
 'uses_devel_repo': False,
 'with_opts': [],
 'without_opts': []}

Running: git clone https://copr-dist-git.fedorainfracloud.org/git/mhough/neurofedora/conglomerate /var/lib/copr-rpmbuild/workspace/workdir-twaq403s/conglomerate --depth 500 --no-single-branch --recursive

cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/mhough/neurofedora/conglomerate', '/var/lib/copr-rpmbuild/workspace/workdir-twaq403s/conglomerate', '--depth', '500', '--no-single-branch', '--recursive']
cwd: .
rc: 0
stdout: 
stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-twaq403s/conglomerate'...

Running: git checkout e14d642226bc8654954d7f15ab1df90caa35d36a --

cmd: ['git', 'checkout', 'e14d642226bc8654954d7f15ab1df90caa35d36a', '--']
cwd: /var/lib/copr-rpmbuild/workspace/workdir-twaq403s/conglomerate
rc: 0
stdout: 
stderr: Note: switching to 'e14d642226bc8654954d7f15ab1df90caa35d36a'.

You are in 'detached HEAD' state. You can look around, make experimental
changes and commit them, and you can discard any commits you make in this
state without impacting any branches by switching back to a branch.

If you want to create a new branch to retain commits you create, you may
do so (now or later) by using -c with the switch command. Example:

  git switch -c <new-branch-name>

Or undo this operation with:

  git switch -

Turn off this advice by setting config variable advice.detachedHead to false

HEAD is now at e14d642 automatic import of conglomerate

Running: dist-git-client sources

cmd: ['dist-git-client', 'sources']
cwd: /var/lib/copr-rpmbuild/workspace/workdir-twaq403s/conglomerate
rc: 0
stdout: 
stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD
INFO: Reading stdout from command: git rev-parse HEAD
INFO: Reading sources specification file: sources
INFO: Downloading conglomerate-166303d.tar.gz
INFO: Reading stdout from command: curl --help all
INFO: Calling: curl -H Pragma: -H 'Accept-Encoding: identity' -o conglomerate-166303d.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/mhough/neurofedora/conglomerate/conglomerate-166303d.tar.gz/md5/c98960361683829b3f6ca53f3fdd19ae/conglomerate-166303d.tar.gz
  % Total    % Received % Xferd  Average Speed  Time    Time    Time   Current
                                 Dload  Upload  Total   Spent   Left   Speed
100 452.6k 100 452.6k   0      0 12.44M      0                              0
INFO: Reading stdout from command: md5sum conglomerate-166303d.tar.gz
INFO: Downloading mni-acmacros.tar.gz
INFO: Calling: curl -H Pragma: -H 'Accept-Encoding: identity' -o mni-acmacros.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/mhough/neurofedora/conglomerate/mni-acmacros.tar.gz/md5/319aef208dbf53a6eeede74b258d993d/mni-acmacros.tar.gz
  % Total    % Received % Xferd  Average Speed  Time    Time    Time   Current
                                 Dload  Upload  Total   Spent   Left   Speed
100  12464 100  12464   0      0  1.05M      0                              0
INFO: Reading stdout from command: md5sum mni-acmacros.tar.gz

tail: /var/lib/copr-rpmbuild/main.log: file truncated
Running (timeout=86400): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-twaq403s/conglomerate/conglomerate.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-twaq403s/conglomerate --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1791435628.862660 -r /var/lib/copr-rpmbuild/results/configs/child.cfg
INFO: mock.py version 6.9 starting (python version = 3.14.5, NVR = mock-6.9-1.fc44), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-twaq403s/conglomerate/conglomerate.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-twaq403s/conglomerate --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1791435628.862660 -r /var/lib/copr-rpmbuild/results/configs/child.cfg
Start(bootstrap): init plugins
INFO: tmpfs initialized
INFO: selinux enabled
INFO: chroot_scan: initialized
INFO: compress_logs: initialized
Finish(bootstrap): init plugins
Start: init plugins
INFO: tmpfs initialized
INFO: selinux enabled
INFO: chroot_scan: initialized
INFO: compress_logs: initialized
Finish: init plugins
INFO: Signal handler active
Start: run
INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-twaq403s/conglomerate/conglomerate.spec)  Config(fedora-43-x86_64)
Start: clean chroot
Finish: clean chroot
Mock Version: 6.9
INFO: Mock Version: 6.9
Start(bootstrap): chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-43-x86_64-bootstrap-1791435628.862660/root.
INFO: calling preinit hooks
INFO: enabled root cache
INFO: enabled package manager cache
Start(bootstrap): cleaning package manager metadata
Finish(bootstrap): cleaning package manager metadata
INFO: Guessed host environment type: unknown
INFO: Using container image: registry.fedoraproject.org/fedora:43
INFO: Pulling image: registry.fedoraproject.org/fedora:43
INFO: Tagging container image as mock-bootstrap-9c0ce82c-36e1-4c2d-ab5b-382db0cfbbe6
INFO: Checking that 3c28bc95ae68461a48d96a4799a3067587b25d64921174a6f9f60c64f7a6edf9 image matches host's architecture
INFO: Copy content of container 3c28bc95ae68461a48d96a4799a3067587b25d64921174a6f9f60c64f7a6edf9 to /var/lib/mock/fedora-43-x86_64-bootstrap-1791435628.862660/root
INFO: mounting 3c28bc95ae68461a48d96a4799a3067587b25d64921174a6f9f60c64f7a6edf9 with podman image mount
INFO: image 3c28bc95ae68461a48d96a4799a3067587b25d64921174a6f9f60c64f7a6edf9 as /var/lib/containers/storage/overlay/d6278b35dc0139357f1fe1fe11dfe664b38c4ead50e6ff1537d836fdeb8b4005/merged
INFO: umounting image 3c28bc95ae68461a48d96a4799a3067587b25d64921174a6f9f60c64f7a6edf9 (/var/lib/containers/storage/overlay/d6278b35dc0139357f1fe1fe11dfe664b38c4ead50e6ff1537d836fdeb8b4005/merged) with podman image umount
INFO: Removing image mock-bootstrap-9c0ce82c-36e1-4c2d-ab5b-382db0cfbbe6
INFO: Package manager dnf5 detected and used (fallback)
INFO: Not updating bootstrap chroot, bootstrap_image_ready=True
Start(bootstrap): creating root cache
Finish(bootstrap): creating root cache
Finish(bootstrap): chroot init
Start: chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-43-x86_64-1791435628.862660/root.
INFO: calling preinit hooks
INFO: enabled root cache
INFO: enabled package manager cache
Start: cleaning package manager metadata
Finish: cleaning package manager metadata
INFO: enabled HW Info plugin
INFO: Package manager dnf5 detected and used (direct choice)
INFO: Buildroot is handled by package management downloaded with a bootstrap image:
  rpm-6.0.2-1.fc43.x86_64
  rpm-sequoia-1.10.3-1.fc43.x86_64
  dnf5-5.2.18.0-5.fc43.x86_64
  dnf5-plugins-5.2.18.0-5.fc43.x86_64
Start: installing minimal buildroot with dnf5
Updating and loading repositories:
 Copr repository                        100% |   6.7 MiB/s | 381.4 KiB |  00m00s
 updates                                100% |  18.9 MiB/s |  12.3 MiB |  00m01s
 fedora                                 100% |  29.2 MiB/s |  35.4 MiB |  00m01s
Repositories loaded.
Package                            Arch   Version                    Repository      Size
Installing group/module packages:
 bash                              x86_64 5.3.0-2.fc43               fedora       8.4 MiB
 bzip2                             x86_64 1.0.8-21.fc43              fedora      95.3 KiB
 coreutils                         x86_64 9.7-10.fc43                updates      5.4 MiB
 cpio                              x86_64 2.15-6.fc43                fedora       1.1 MiB
 diffutils                         x86_64 3.12-3.fc43                fedora       1.6 MiB
 fedora-release-common             noarch 43-27                      updates     20.6 KiB
 findutils                         x86_64 1:4.10.0-6.fc43            fedora       1.8 MiB
 gawk                              x86_64 5.3.2-2.fc43               fedora       1.8 MiB
 glibc-minimal-langpack            x86_64 2.42-17.fc43               updates      0.0   B
 grep                              x86_64 3.12-2.fc43                fedora       1.0 MiB
 gzip                              x86_64 1.13-4.fc43                fedora     388.8 KiB
 info                              x86_64 7.2-7.fc43                 updates    353.9 KiB
 patch                             x86_64 2.8-2.fc43                 fedora     222.8 KiB
 redhat-rpm-config                 noarch 343-14.fc43                updates    182.9 KiB
 rpm-build                         x86_64 6.0.2-1.fc43               updates    286.4 KiB
 sed                               x86_64 4.9-5.fc43                 fedora     857.3 KiB
 shadow-utils                      x86_64 2:4.18.0-3.fc43            fedora       3.9 MiB
 tar                               x86_64 2:1.35-6.fc43              fedora       2.9 MiB
 unzip                             x86_64 6.0-67.fc43                fedora     386.3 KiB
 util-linux                        x86_64 2.41.5-1.fc43              updates      3.5 MiB
 which                             x86_64 2.23-3.fc43                fedora      83.5 KiB
 xz                                x86_64 1:5.8.1-4.fc43             updates      1.3 MiB
Installing dependencies:
 add-determinism                   x86_64 0.6.0-3.fc43               updates      2.3 MiB
 alternatives                      x86_64 1.33-3.fc43                updates     62.2 KiB
 ansible-srpm-macros               noarch 1-18.1.fc43                fedora      35.7 KiB
 audit-libs                        x86_64 4.2.1-1.fc43               updates    382.5 KiB
 binutils                          x86_64 2.45.1-5.fc43              updates     27.3 MiB
 build-reproducibility-srpm-macros noarch 0.6.0-3.fc43               updates    735.0   B
 bzip2-libs                        x86_64 1.0.8-21.fc43              fedora      80.6 KiB
 ca-certificates                   noarch 2026.2.90_v9.0.317-1.fc43  updates      2.7 MiB
 cmake-srpm-macros                 noarch 3.31.11-1.fc43             updates    524.0   B
 coreutils-common                  x86_64 9.7-10.fc43                updates     11.3 MiB
 crypto-policies                   noarch 20251125-1.git63291f8.fc43 updates    147.1 KiB
 curl                              x86_64 8.15.0-10.fc43             updates    461.4 KiB
 cyrus-sasl-lib                    x86_64 2.1.28-33.fc43             fedora       2.3 MiB
 debugedit                         x86_64 5.2-3.fc43                 fedora     214.0 KiB
 dwz                               x86_64 0.16-2.fc43                fedora     287.1 KiB
 ed                                x86_64 1.22.2-1.fc43              fedora     148.1 KiB
 efi-srpm-macros                   noarch 6-4.fc43                   fedora      40.1 KiB
 elfutils                          x86_64 0.196-1.fc43               updates      3.1 MiB
 elfutils-debuginfod-client        x86_64 0.196-1.fc43               updates     83.9 KiB
 elfutils-default-yama-scope       noarch 0.196-1.fc43               updates      1.8 KiB
 elfutils-libelf                   x86_64 0.196-1.fc43               updates      1.4 MiB
 elfutils-libs                     x86_64 0.196-1.fc43               updates    695.4 KiB
 fedora-gpg-keys                   noarch 43-2                       updates    259.0 KiB
 fedora-release                    noarch 43-27                      updates      0.0   B
 fedora-release-identity-basic     noarch 43-27                      updates    631.0   B
 fedora-repos                      noarch 43-2                       updates      4.9 KiB
 file                              x86_64 5.46-9.fc43                updates    100.2 KiB
 file-libs                         x86_64 5.46-9.fc43                updates     11.9 MiB
 filesystem                        x86_64 3.18-50.fc43               fedora     112.0   B
 filesystem-srpm-macros            noarch 3.18-50.fc43               fedora      38.2 KiB
 fonts-srpm-macros                 noarch 1:2.0.5-23.fc43            fedora      55.8 KiB
 forge-srpm-macros                 noarch 0.4.0-3.fc43               fedora      38.9 KiB
 fpc-srpm-macros                   noarch 1.3-15.fc43                fedora     144.0   B
 gap-srpm-macros                   noarch 2-1.fc43                   fedora       2.1 KiB
 gdb-minimal                       x86_64 17.2-2.fc43                updates     13.6 MiB
 gdbm-libs                         x86_64 1:1.23-10.fc43             fedora     129.9 KiB
 ghc-srpm-macros                   noarch 1.9.2-3.fc43               fedora     779.0   B
 glibc                             x86_64 2.42-17.fc43               updates      6.7 MiB
 glibc-common                      x86_64 2.42-17.fc43               updates      1.0 MiB
 glibc-gconv-extra                 x86_64 2.42-17.fc43               updates      7.2 MiB
 gmp                               x86_64 1:6.3.0-4.fc43             fedora     811.2 KiB
 gnat-srpm-macros                  noarch 7-1.fc43                   updates      1.0 KiB
 gnome-srpm-macros                 noarch 1.0-1.fc43                 updates      3.5 KiB
 gnulib-l10n                       noarch 20241231-1.fc43            fedora     655.0 KiB
 gnupg2                            x86_64 2.4.9-5.fc43               updates      6.6 MiB
 gnupg2-dirmngr                    x86_64 2.4.9-5.fc43               updates    618.4 KiB
 gnupg2-gpg-agent                  x86_64 2.4.9-5.fc43               updates    671.4 KiB
 gnupg2-gpgconf                    x86_64 2.4.9-5.fc43               updates    250.0 KiB
 gnupg2-keyboxd                    x86_64 2.4.9-5.fc43               updates    201.4 KiB
 gnupg2-verify                     x86_64 2.4.9-5.fc43               updates    348.5 KiB
 gnutls                            x86_64 3.8.13-1.fc43              updates      3.8 MiB
 go-srpm-macros                    noarch 3.8.0-1.fc43               fedora      61.9 KiB
 gpgverify                         noarch 2.2-3.fc43                 fedora       8.7 KiB
 ima-evm-utils-libs                x86_64 1.6.2-6.fc43               fedora      60.7 KiB
 jansson                           x86_64 2.14-3.fc43                fedora      89.1 KiB
 java-srpm-macros                  noarch 1-7.fc43                   fedora     870.0   B
 json-c                            x86_64 0.18-7.fc43                fedora      82.7 KiB
 kernel-srpm-macros                noarch 1.0-27.fc43                fedora       1.9 KiB
 keyutils-libs                     x86_64 1.6.3-6.fc43               fedora      54.3 KiB
 krb5-libs                         x86_64 1.22.2-4.fc43              updates      2.3 MiB
 libacl                            x86_64 2.4.0-1.fc43               updates     39.9 KiB
 libarchive                        x86_64 3.8.4-1.fc43               updates    955.3 KiB
 libassuan                         x86_64 2.5.7-4.fc43               fedora     163.8 KiB
 libattr                           x86_64 2.6.0-1.fc43               updates     24.3 KiB
 libblkid                          x86_64 2.41.5-1.fc43              updates    262.3 KiB
 libbrotli                         x86_64 1.2.0-1.fc43               updates    865.4 KiB
 libcap                            x86_64 2.76-4.fc43                updates    209.1 KiB
 libcap-ng                         x86_64 0.9.6-1.fc43               updates     68.8 KiB
 libcom_err                        x86_64 1.47.3-2.fc43              fedora      63.1 KiB
 libcurl                           x86_64 8.15.0-10.fc43             updates    907.0 KiB
 libeconf                          x86_64 0.7.9-2.fc43               fedora      64.9 KiB
 libevent                          x86_64 2.1.13-1.fc43              updates    884.4 KiB
 libfdisk                          x86_64 2.41.5-1.fc43              updates    380.3 KiB
 libffi                            x86_64 3.5.2-1.fc43               updates     83.8 KiB
 libfsverity                       x86_64 1.6-3.fc43                 fedora      28.5 KiB
 libgcc                            x86_64 15.3.1-1.fc43              updates    266.6 KiB
 libgcrypt                         x86_64 1.11.1-4.fc43              updates      1.6 MiB
 libgomp                           x86_64 15.3.1-1.fc43              updates    541.8 KiB
 libgpg-error                      x86_64 1.55-2.fc43                fedora     915.3 KiB
 libidn2                           x86_64 2.3.8-2.fc43               fedora     552.5 KiB
 libksba                           x86_64 1.6.7-4.fc43               fedora     398.5 KiB
 liblastlog2                       x86_64 2.41.5-1.fc43              updates     37.6 KiB
 libmount                          x86_64 2.41.5-1.fc43              updates    376.6 KiB
 libnghttp2                        x86_64 1.66.0-3.fc43              updates    162.1 KiB
 libpfm                            x86_64 4.13.0-20.fc43             updates      1.7 MiB
 libpkgconf                        x86_64 2.3.0-3.fc43               fedora      78.1 KiB
 libpsl                            x86_64 0.21.5-6.fc43              fedora      76.4 KiB
 libselinux                        x86_64 3.9-5.fc43                 fedora     193.1 KiB
 libsemanage                       x86_64 3.9-4.fc43                 fedora     308.5 KiB
 libsepol                          x86_64 3.9-2.fc43                 fedora     822.0 KiB
 libsmartcols                      x86_64 2.41.5-1.fc43              updates    180.3 KiB
 libssh                            x86_64 0.11.5-1.fc43              updates    573.1 KiB
 libssh-config                     noarch 0.11.5-1.fc43              updates    277.0   B
 libstdc++                         x86_64 15.3.1-1.fc43              updates      2.8 MiB
 libtasn1                          x86_64 4.21.0-1.fc43              updates    176.7 KiB
 libtool-ltdl                      x86_64 2.5.4-8.fc43               updates     70.1 KiB
 libunistring                      x86_64 1.1-10.fc43                fedora       1.7 MiB
 libusb1                           x86_64 1.0.30-1.fc43              updates    176.0 KiB
 libuuid                           x86_64 2.41.5-1.fc43              updates     37.2 KiB
 libverto                          x86_64 0.3.2-11.fc43              fedora      25.4 KiB
 libxcrypt                         x86_64 4.5.2-1.fc43               updates    285.3 KiB
 libxml2                           x86_64 2.12.10-5.fc43             fedora       1.7 MiB
 libzstd                           x86_64 1.5.7-2.fc43               fedora     799.9 KiB
 lua-libs                          x86_64 5.4.8-4.fc43               updates    281.9 KiB
 lua-srpm-macros                   noarch 1-16.fc43                  fedora       1.3 KiB
 lz4-libs                          x86_64 1.10.0-3.fc43              fedora     161.4 KiB
 mpfr                              x86_64 4.2.2-2.fc43               fedora     832.8 KiB
 ncurses-base                      noarch 6.5-7.20250614.fc43        fedora     328.1 KiB
 ncurses-libs                      x86_64 6.5-7.20250614.fc43        fedora     946.3 KiB
 nettle                            x86_64 3.10.1-2.fc43              fedora     790.6 KiB
 npth                              x86_64 1.8-3.fc43                 fedora      49.6 KiB
 ocaml-srpm-macros                 noarch 11-2.fc43                  fedora       1.9 KiB
 openblas-srpm-macros              noarch 2-20.fc43                  fedora     112.0   B
 openldap                          x86_64 2.6.14-1.fc43              updates    658.7 KiB
 openssl-libs                      x86_64 1:3.5.8-1.fc43             updates      8.9 MiB
 p11-kit                           x86_64 0.26.5-1.fc43              updates      2.5 MiB
 p11-kit-trust                     x86_64 0.26.5-1.fc43              updates    466.3 KiB
 package-notes-srpm-macros         noarch 0.20-1.fc43                updates      1.6 KiB
 pam-libs                          x86_64 1.7.1-5.fc43               updates    126.5 KiB
 pcre2                             x86_64 10.47-1.fc43               updates    702.6 KiB
 pcre2-syntax                      noarch 10.47-1.fc43               updates    281.9 KiB
 perl-srpm-macros                  noarch 1-60.fc43                  fedora     861.0   B
 pkgconf                           x86_64 2.3.0-3.fc43               fedora      88.5 KiB
 pkgconf-m4                        noarch 2.3.0-3.fc43               fedora      14.4 KiB
 pkgconf-pkg-config                x86_64 2.3.0-3.fc43               fedora     989.0   B
 popt                              x86_64 1.19-9.fc43                fedora     132.8 KiB
 publicsuffix-list-dafsa           noarch 20260116-1.fc43            updates     70.4 KiB
 pyproject-srpm-macros             noarch 1.23.2-1.fc43              updates      3.4 KiB
 python-srpm-macros                noarch 3.14-5.fc43                fedora      51.5 KiB
 qt5-srpm-macros                   noarch 5.15.18-1.fc43             updates    500.0   B
 qt6-srpm-macros                   noarch 6.10.3-1.fc43              updates    472.0   B
 readline                          x86_64 8.3-2.fc43                 fedora     511.7 KiB
 rpm                               x86_64 6.0.2-1.fc43               updates      3.1 MiB
 rpm-build-libs                    x86_64 6.0.2-1.fc43               updates    264.3 KiB
 rpm-libs                          x86_64 6.0.2-1.fc43               updates    933.5 KiB
 rpm-sequoia                       x86_64 1.10.3-1.fc43              updates      2.4 MiB
 rpm-sign-libs                     x86_64 6.0.2-1.fc43               updates     39.6 KiB
 rust-srpm-macros                  noarch 28.5-1.fc43                updates      5.5 KiB
 setup                             noarch 2.15.0-26.fc43             fedora     725.0 KiB
 sqlite-libs                       x86_64 3.50.2-3.fc43              updates      1.5 MiB
 systemd-libs                      x86_64 258.11-1.fc43              updates      2.3 MiB
 systemd-standalone-sysusers       x86_64 258.11-1.fc43              updates    297.4 KiB
 tpm2-tss                          x86_64 4.1.3-8.fc43               fedora       1.6 MiB
 tree-sitter-srpm-macros           noarch 0.4.2-1.fc43               fedora       8.3 KiB
 util-linux-core                   x86_64 2.41.5-1.fc43              updates      1.5 MiB
 xxhash-libs                       x86_64 0.8.4-1.fc43               updates     90.0 KiB
 xz-libs                           x86_64 1:5.8.1-4.fc43             updates    217.8 KiB
 zig-srpm-macros                   noarch 1-5.fc43                   fedora       1.1 KiB
 zip                               x86_64 3.0-44.fc43                fedora     694.5 KiB
 zlib-ng-compat                    x86_64 2.3.3-2.fc43               updates    161.7 KiB
 zstd                              x86_64 1.5.7-2.fc43               fedora       1.7 MiB
Installing groups:
 Buildsystem building group                                                              

Transaction Summary:
 Installing:       173 packages

Total size of inbound packages is 60 MiB. Need to download 60 MiB.
After this operation, 203 MiB extra will be used (install 203 MiB, remove 0 B).
[  1/173] bzip2-0:1.0.8-21.fc43.x86_64  100% |   3.9 MiB/s |  51.6 KiB |  00m00s
[  2/173] bash-0:5.3.0-2.fc43.x86_64    100% |  98.4 MiB/s |   1.9 MiB |  00m00s
[  3/173] cpio-0:2.15-6.fc43.x86_64     100% |  15.1 MiB/s | 293.1 KiB |  00m00s
[  4/173] diffutils-0:3.12-3.fc43.x86_6 100% |  63.8 MiB/s | 392.3 KiB |  00m00s
[  5/173] findutils-1:4.10.0-6.fc43.x86 100% | 134.3 MiB/s | 550.0 KiB |  00m00s
[  6/173] grep-0:3.12-2.fc43.x86_64     100% |  73.0 MiB/s | 299.1 KiB |  00m00s
[  7/173] gzip-0:1.13-4.fc43.x86_64     100% |  27.7 MiB/s | 170.1 KiB |  00m00s
[  8/173] patch-0:2.8-2.fc43.x86_64     100% |  27.8 MiB/s | 113.8 KiB |  00m00s
[  9/173] sed-0:4.9-5.fc43.x86_64       100% |  77.4 MiB/s | 317.1 KiB |  00m00s
[ 10/173] shadow-utils-2:4.18.0-3.fc43. 100% | 183.2 MiB/s |   1.3 MiB |  00m00s
[ 11/173] tar-2:1.35-6.fc43.x86_64      100% | 139.4 MiB/s | 856.4 KiB |  00m00s
[ 12/173] unzip-0:6.0-67.fc43.x86_64    100% |  29.9 MiB/s | 183.7 KiB |  00m00s
[ 13/173] which-0:2.23-3.fc43.x86_64    100% |  20.4 MiB/s |  41.7 KiB |  00m00s
[ 14/173] fedora-release-common-0:43-27 100% |  11.0 MiB/s |  22.6 KiB |  00m00s
[ 15/173] coreutils-0:9.7-10.fc43.x86_6 100% | 162.6 MiB/s |   1.1 MiB |  00m00s
[ 16/173] glibc-minimal-langpack-0:2.42 100% |   9.2 MiB/s |  47.1 KiB |  00m00s
[ 17/173] gawk-0:5.3.2-2.fc43.x86_64    100% | 140.6 MiB/s |   1.1 MiB |  00m00s
[ 18/173] info-0:7.2-7.fc43.x86_64      100% |  35.7 MiB/s | 182.7 KiB |  00m00s
[ 19/173] redhat-rpm-config-0:343-14.fc 100% |  14.9 MiB/s |  76.1 KiB |  00m00s
[ 20/173] rpm-build-0:6.0.2-1.fc43.x86_ 100% |  22.0 MiB/s | 135.3 KiB |  00m00s
[ 21/173] xz-1:5.8.1-4.fc43.x86_64      100% | 111.9 MiB/s | 572.7 KiB |  00m00s
[ 22/173] util-linux-0:2.41.5-1.fc43.x8 100% | 149.2 MiB/s |   1.2 MiB |  00m00s
[ 23/173] ncurses-libs-0:6.5-7.20250614 100% |  81.2 MiB/s | 332.7 KiB |  00m00s
[ 24/173] filesystem-0:3.18-50.fc43.x86 100% | 133.4 MiB/s |   1.3 MiB |  00m00s
[ 25/173] bzip2-libs-0:1.0.8-21.fc43.x8 100% |   7.0 MiB/s |  43.1 KiB |  00m00s
[ 26/173] libselinux-0:3.9-5.fc43.x86_6 100% |  23.8 MiB/s |  97.7 KiB |  00m00s
[ 27/173] libeconf-0:0.7.9-2.fc43.x86_6 100% |  11.5 MiB/s |  35.2 KiB |  00m00s
[ 28/173] ed-0:1.22.2-1.fc43.x86_64     100% |  13.6 MiB/s |  83.7 KiB |  00m00s
[ 29/173] libsemanage-0:3.9-4.fc43.x86_ 100% |  30.2 MiB/s | 123.5 KiB |  00m00s
[ 30/173] setup-0:2.15.0-26.fc43.noarch 100% |  51.2 MiB/s | 157.3 KiB |  00m00s
[ 31/173] gmp-1:6.3.0-4.fc43.x86_64     100% |  78.0 MiB/s | 319.3 KiB |  00m00s
[ 32/173] mpfr-0:4.2.2-2.fc43.x86_64    100% |  56.5 MiB/s | 347.0 KiB |  00m00s
[ 33/173] readline-0:8.3-2.fc43.x86_64  100% |  54.8 MiB/s | 224.6 KiB |  00m00s
[ 34/173] coreutils-common-0:9.7-10.fc4 100% | 175.0 MiB/s |   2.1 MiB |  00m00s
[ 35/173] cmake-srpm-macros-0:3.31.11-1 100% |   3.2 MiB/s |   9.9 KiB |  00m00s
[ 36/173] glibc-common-0:2.42-17.fc43.x 100% |  54.3 MiB/s | 333.9 KiB |  00m00s
[ 37/173] gnome-srpm-macros-0:1.0-1.fc4 100% |   2.8 MiB/s |   8.6 KiB |  00m00s
[ 38/173] ansible-srpm-macros-0:1-18.1. 100% |   6.5 MiB/s |  19.9 KiB |  00m00s
[ 39/173] filesystem-srpm-macros-0:3.18 100% |  12.9 MiB/s |  26.4 KiB |  00m00s
[ 40/173] efi-srpm-macros-0:6-4.fc43.no 100% |   7.3 MiB/s |  22.4 KiB |  00m00s
[ 41/173] dwz-0:0.16-2.fc43.x86_64      100% |  33.1 MiB/s | 135.5 KiB |  00m00s
[ 42/173] fpc-srpm-macros-0:1.3-15.fc43 100% |   7.7 MiB/s |   7.9 KiB |  00m00s
[ 43/173] fonts-srpm-macros-1:2.0.5-23. 100% |   8.8 MiB/s |  27.2 KiB |  00m00s
[ 44/173] forge-srpm-macros-0:0.4.0-3.f 100% |   6.5 MiB/s |  20.1 KiB |  00m00s
[ 45/173] gap-srpm-macros-0:2-1.fc43.no 100% |   4.4 MiB/s |   9.0 KiB |  00m00s
[ 46/173] ghc-srpm-macros-0:1.9.2-3.fc4 100% |   4.3 MiB/s |   8.7 KiB |  00m00s
[ 47/173] go-srpm-macros-0:3.8.0-1.fc43 100% |  13.8 MiB/s |  28.3 KiB |  00m00s
[ 48/173] java-srpm-macros-0:1-7.fc43.n 100% |   2.6 MiB/s |   7.9 KiB |  00m00s
[ 49/173] kernel-srpm-macros-0:1.0-27.f 100% |   2.9 MiB/s |   8.9 KiB |  00m00s
[ 50/173] lua-srpm-macros-0:1-16.fc43.n 100% |   4.3 MiB/s |   8.8 KiB |  00m00s
[ 51/173] openblas-srpm-macros-0:2-20.f 100% |   3.7 MiB/s |   7.6 KiB |  00m00s
[ 52/173] ocaml-srpm-macros-0:11-2.fc43 100% |   4.5 MiB/s |   9.3 KiB |  00m00s
[ 53/173] perl-srpm-macros-0:1-60.fc43. 100% |   4.0 MiB/s |   8.3 KiB |  00m00s
[ 54/173] zig-srpm-macros-0:1-5.fc43.no 100% |   4.1 MiB/s |   8.4 KiB |  00m00s
[ 55/173] tree-sitter-srpm-macros-0:0.4 100% |   6.5 MiB/s |  13.4 KiB |  00m00s
[ 56/173] python-srpm-macros-0:3.14-5.f 100% |  11.4 MiB/s |  23.4 KiB |  00m00s
[ 57/173] zip-0:3.0-44.fc43.x86_64      100% |  85.1 MiB/s | 261.6 KiB |  00m00s
[ 58/173] rpm-0:6.0.2-1.fc43.x86_64     100% | 140.1 MiB/s | 574.0 KiB |  00m00s
[ 59/173] debugedit-0:5.2-3.fc43.x86_64 100% |  20.9 MiB/s |  85.6 KiB |  00m00s
[ 60/173] popt-0:1.19-9.fc43.x86_64     100% |  21.4 MiB/s |  65.7 KiB |  00m00s
[ 61/173] zstd-0:1.5.7-2.fc43.x86_64    100% | 118.6 MiB/s | 485.9 KiB |  00m00s
[ 62/173] util-linux-core-0:2.41.5-1.fc 100% | 134.7 MiB/s | 551.6 KiB |  00m00s
[ 63/173] xz-libs-1:5.8.1-4.fc43.x86_64 100% |  27.5 MiB/s | 112.8 KiB |  00m00s
[ 64/173] ncurses-base-0:6.5-7.20250614 100% |  43.1 MiB/s |  88.2 KiB |  00m00s
[ 65/173] libsepol-0:3.9-2.fc43.x86_64  100% |  84.3 MiB/s | 345.4 KiB |  00m00s
[ 66/173] gnulib-l10n-0:20241231-1.fc43 100% |  48.9 MiB/s | 150.2 KiB |  00m00s
[ 67/173] lz4-libs-0:1.10.0-3.fc43.x86_ 100% |  19.0 MiB/s |  78.0 KiB |  00m00s
[ 68/173] rpm-libs-0:6.0.2-1.fc43.x86_6 100% |  77.8 MiB/s | 398.4 KiB |  00m00s
[ 69/173] glibc-0:2.42-17.fc43.x86_64   100% | 184.1 MiB/s |   2.2 MiB |  00m00s
[ 70/173] glibc-gconv-extra-0:2.42-17.f 100% | 122.2 MiB/s |   1.6 MiB |  00m00s
[ 71/173] libzstd-0:1.5.7-2.fc43.x86_64 100% |  30.7 MiB/s | 314.6 KiB |  00m00s
[ 72/173] rpm-build-libs-0:6.0.2-1.fc43 100% |  30.3 MiB/s | 124.1 KiB |  00m00s
[ 73/173] rpm-sign-libs-0:6.0.2-1.fc43. 100% |  12.4 MiB/s |  25.5 KiB |  00m00s
[ 74/173] ima-evm-utils-libs-0:1.6.2-6. 100% |  14.3 MiB/s |  29.3 KiB |  00m00s
[ 75/173] libfsverity-0:1.6-3.fc43.x86_ 100% |   9.1 MiB/s |  18.6 KiB |  00m00s
[ 76/173] json-c-0:0.18-7.fc43.x86_64   100% |  22.0 MiB/s |  45.0 KiB |  00m00s
[ 77/173] tpm2-tss-0:4.1.3-8.fc43.x86_6 100% | 104.0 MiB/s | 425.9 KiB |  00m00s
[ 78/173] libgcc-0:15.3.1-1.fc43.x86_64 100% |  34.9 MiB/s | 142.9 KiB |  00m00s
[ 79/173] libstdc++-0:15.3.1-1.fc43.x86 100% | 151.5 MiB/s | 931.1 KiB |  00m00s
[ 80/173] zlib-ng-compat-0:2.3.3-2.fc43 100% |  17.3 MiB/s |  88.7 KiB |  00m00s
[ 81/173] libusb1-0:1.0.30-1.fc43.x86_6 100% |  19.7 MiB/s |  80.5 KiB |  00m00s
[ 82/173] libuuid-0:2.41.5-1.fc43.x86_6 100% |  13.0 MiB/s |  26.7 KiB |  00m00s
[ 83/173] libmount-0:2.41.5-1.fc43.x86_ 100% |  53.3 MiB/s | 163.8 KiB |  00m00s
[ 84/173] libblkid-0:2.41.5-1.fc43.x86_ 100% |  40.3 MiB/s | 123.9 KiB |  00m00s
[ 85/173] libacl-0:2.4.0-1.fc43.x86_64  100% |   8.5 MiB/s |  26.1 KiB |  00m00s
[ 86/173] audit-libs-0:4.2.1-1.fc43.x86 100% |  27.3 MiB/s | 139.6 KiB |  00m00s
[ 87/173] openssl-libs-1:3.5.8-1.fc43.x 100% | 201.8 MiB/s |   2.6 MiB |  00m00s
[ 88/173] libxcrypt-0:4.5.2-1.fc43.x86_ 100% |  15.6 MiB/s | 128.1 KiB |  00m00s
[ 89/173] pam-libs-0:1.7.1-5.fc43.x86_6 100% |  13.8 MiB/s |  56.4 KiB |  00m00s
[ 90/173] libattr-0:2.6.0-1.fc43.x86_64 100% |   8.7 MiB/s |  17.9 KiB |  00m00s
[ 91/173] pcre2-0:10.47-1.fc43.x86_64   100% |  65.2 MiB/s | 267.2 KiB |  00m00s
[ 92/173] pcre2-syntax-0:10.47-1.fc43.n 100% |  40.2 MiB/s | 164.7 KiB |  00m00s
[ 93/173] elfutils-libelf-0:0.196-1.fc4 100% |  38.3 MiB/s | 235.6 KiB |  00m00s
[ 94/173] elfutils-0:0.196-1.fc43.x86_6 100% | 127.5 MiB/s | 652.7 KiB |  00m00s
[ 95/173] elfutils-libs-0:0.196-1.fc43. 100% |  44.4 MiB/s | 272.8 KiB |  00m00s
[ 96/173] elfutils-debuginfod-client-0: 100% |  11.3 MiB/s |  46.2 KiB |  00m00s
[ 97/173] jansson-0:2.14-3.fc43.x86_64  100% |  22.1 MiB/s |  45.3 KiB |  00m00s
[ 98/173] libsmartcols-0:2.41.5-1.fc43. 100% |  20.6 MiB/s |  84.4 KiB |  00m00s
[ 99/173] systemd-libs-0:258.11-1.fc43. 100% | 135.4 MiB/s | 832.0 KiB |  00m00s
[100/173] libcap-ng-0:0.9.6-1.fc43.x86_ 100% |   8.4 MiB/s |  34.3 KiB |  00m00s
[101/173] libfdisk-0:2.41.5-1.fc43.x86_ 100% |  39.6 MiB/s | 162.3 KiB |  00m00s
[102/173] liblastlog2-0:2.41.5-1.fc43.x 100% |   5.8 MiB/s |  23.8 KiB |  00m00s
[103/173] binutils-0:2.45.1-5.fc43.x86_ 100% | 258.1 MiB/s |   5.9 MiB |  00m00s
[104/173] libcap-0:2.76-4.fc43.x86_64   100% |   9.3 MiB/s |  86.1 KiB |  00m00s
[105/173] gpgverify-0:2.2-3.fc43.noarch 100% |   3.6 MiB/s |  11.1 KiB |  00m00s
[106/173] gnupg2-0:2.4.9-5.fc43.x86_64  100% | 116.9 MiB/s |   1.6 MiB |  00m00s
[107/173] gnupg2-dirmngr-0:2.4.9-5.fc43 100% |  44.8 MiB/s | 275.0 KiB |  00m00s
[108/173] gnupg2-gpg-agent-0:2.4.9-5.fc 100% |  66.7 MiB/s | 273.4 KiB |  00m00s
[109/173] gnupg2-gpgconf-0:2.4.9-5.fc43 100% |  28.2 MiB/s | 115.3 KiB |  00m00s
[110/173] gnupg2-keyboxd-0:2.4.9-5.fc43 100% |  18.5 MiB/s |  94.7 KiB |  00m00s
[111/173] gnupg2-verify-0:2.4.9-5.fc43. 100% |  55.8 MiB/s | 171.6 KiB |  00m00s
[112/173] libassuan-0:2.5.7-4.fc43.x86_ 100% |  21.9 MiB/s |  67.4 KiB |  00m00s
[113/173] npth-0:1.8-3.fc43.x86_64      100% |  12.5 MiB/s |  25.7 KiB |  00m00s
[114/173] libgpg-error-0:1.55-2.fc43.x8 100% |  79.5 MiB/s | 244.3 KiB |  00m00s
[115/173] libksba-0:1.6.7-4.fc43.x86_64 100% |  52.2 MiB/s | 160.4 KiB |  00m00s
[116/173] lua-libs-0:5.4.8-4.fc43.x86_6 100% |  43.3 MiB/s | 133.1 KiB |  00m00s
[117/173] rpm-sequoia-0:1.10.3-1.fc43.x 100% | 183.7 MiB/s | 940.6 KiB |  00m00s
[118/173] file-libs-0:5.46-9.fc43.x86_6 100% | 103.7 MiB/s | 849.9 KiB |  00m00s
[119/173] sqlite-libs-0:3.50.2-3.fc43.x 100% |  74.1 MiB/s | 758.9 KiB |  00m00s
[120/173] file-0:5.46-9.fc43.x86_64     100% |   6.8 MiB/s |  48.5 KiB |  00m00s
[121/173] libgomp-0:15.3.1-1.fc43.x86_6 100% |  74.9 MiB/s | 383.6 KiB |  00m00s
[122/173] libarchive-0:3.8.4-1.fc43.x86 100% |  82.5 MiB/s | 422.6 KiB |  00m00s
[123/173] libxml2-0:2.12.10-5.fc43.x86_ 100% | 112.7 MiB/s | 692.7 KiB |  00m00s
[124/173] pkgconf-pkg-config-0:2.3.0-3. 100% |   4.7 MiB/s |   9.6 KiB |  00m00s
[125/173] pkgconf-0:2.3.0-3.fc43.x86_64 100% |  43.5 MiB/s |  44.6 KiB |  00m00s
[126/173] pkgconf-m4-0:2.3.0-3.fc43.noa 100% |   6.8 MiB/s |  13.9 KiB |  00m00s
[127/173] libpkgconf-0:2.3.0-3.fc43.x86 100% |  12.3 MiB/s |  37.9 KiB |  00m00s
[128/173] curl-0:8.15.0-10.fc43.x86_64  100% |  55.3 MiB/s | 226.6 KiB |  00m00s
[129/173] build-reproducibility-srpm-ma 100% |   3.9 MiB/s |  11.9 KiB |  00m00s
[130/173] gnat-srpm-macros-0:7-1.fc43.n 100% |   2.8 MiB/s |   8.7 KiB |  00m00s
[131/173] add-determinism-0:0.6.0-3.fc4 100% | 124.7 MiB/s | 893.7 KiB |  00m00s
[132/173] package-notes-srpm-macros-0:0 100% |   1.9 MiB/s |   9.9 KiB |  00m00s
[133/173] pyproject-srpm-macros-0:1.23. 100% |   5.1 MiB/s |  15.5 KiB |  00m00s
[134/173] qt5-srpm-macros-0:5.15.18-1.f 100% |   4.2 MiB/s |   8.6 KiB |  00m00s
[135/173] qt6-srpm-macros-0:6.10.3-1.fc 100% |   4.5 MiB/s |   9.1 KiB |  00m00s
[136/173] rust-srpm-macros-0:28.5-1.fc4 100% |   5.5 MiB/s |  11.2 KiB |  00m00s
[137/173] crypto-policies-0:20251125-1. 100% |  31.8 MiB/s |  97.8 KiB |  00m00s
[138/173] libgcrypt-0:1.11.1-4.fc43.x86 100% | 116.4 MiB/s | 596.0 KiB |  00m00s
[139/173] ca-certificates-0:2026.2.90_v 100% | 135.8 MiB/s | 973.1 KiB |  00m00s
[140/173] libidn2-0:2.3.8-2.fc43.x86_64 100% |  56.9 MiB/s | 174.9 KiB |  00m00s
[141/173] gnutls-0:3.8.13-1.fc43.x86_64 100% | 173.6 MiB/s |   1.4 MiB |  00m00s
[142/173] libunistring-0:1.1-10.fc43.x8 100% |  75.7 MiB/s | 542.9 KiB |  00m00s
[143/173] nettle-0:3.10.1-2.fc43.x86_64 100% |  69.0 MiB/s | 424.2 KiB |  00m00s
[144/173] openldap-0:2.6.14-1.fc43.x86_ 100% |  50.7 MiB/s | 259.4 KiB |  00m00s
[145/173] gdbm-libs-1:1.23-10.fc43.x86_ 100% |  18.5 MiB/s |  56.8 KiB |  00m00s
[146/173] cyrus-sasl-lib-0:2.1.28-33.fc 100% | 128.2 MiB/s | 787.9 KiB |  00m00s
[147/173] fedora-repos-0:43-2.noarch    100% |   1.7 MiB/s |   8.9 KiB |  00m00s
[148/173] fedora-gpg-keys-0:43-2.noarch 100% |  30.0 MiB/s | 184.2 KiB |  00m00s
[149/173] elfutils-default-yama-scope-0 100% |   2.8 MiB/s |  11.3 KiB |  00m00s
[150/173] libpfm-0:4.13.0-20.fc43.x86_6 100% |  44.0 MiB/s | 225.4 KiB |  00m00s
[151/173] libffi-0:3.5.2-1.fc43.x86_64  100% |  10.0 MiB/s |  41.1 KiB |  00m00s
[152/173] alternatives-0:1.33-3.fc43.x8 100% |  19.8 MiB/s |  40.6 KiB |  00m00s
[153/173] p11-kit-0:0.26.5-1.fc43.x86_6 100% |  88.3 MiB/s | 542.8 KiB |  00m00s
[154/173] p11-kit-trust-0:0.26.5-1.fc43 100% |  34.3 MiB/s | 140.6 KiB |  00m00s
[155/173] libtool-ltdl-0:2.5.4-8.fc43.x 100% |  17.7 MiB/s |  36.2 KiB |  00m00s
[156/173] libtasn1-0:4.21.0-1.fc43.x86_ 100% |  18.2 MiB/s |  74.5 KiB |  00m00s
[157/173] libevent-0:2.1.13-1.fc43.x86_ 100% |  84.5 MiB/s | 259.5 KiB |  00m00s
[158/173] fedora-release-0:43-27.noarch 100% |   5.6 MiB/s |  11.5 KiB |  00m00s
[159/173] systemd-standalone-sysusers-0 100% |  48.6 MiB/s | 149.4 KiB |  00m00s
[160/173] xxhash-libs-0:0.8.4-1.fc43.x8 100% |  12.6 MiB/s |  38.6 KiB |  00m00s
[161/173] fedora-release-identity-basic 100% |   4.0 MiB/s |  12.3 KiB |  00m00s
[162/173] libcurl-0:8.15.0-10.fc43.x86_ 100% |  98.5 MiB/s | 403.5 KiB |  00m00s
[163/173] libssh-0:0.11.5-1.fc43.x86_64 100% |  28.6 MiB/s | 234.6 KiB |  00m00s
[164/173] gdb-minimal-0:17.2-2.fc43.x86 100% | 223.7 MiB/s |   4.5 MiB |  00m00s
[165/173] libssh-config-0:0.11.5-1.fc43 100% |   2.2 MiB/s |   8.9 KiB |  00m00s
[166/173] libpsl-0:0.21.5-6.fc43.x86_64 100% |   5.8 MiB/s |  65.0 KiB |  00m00s
[167/173] publicsuffix-list-dafsa-0:202 100% |  19.6 MiB/s |  60.3 KiB |  00m00s
[168/173] keyutils-libs-0:1.6.3-6.fc43. 100% |  15.3 MiB/s |  31.4 KiB |  00m00s
[169/173] krb5-libs-0:1.22.2-4.fc43.x86 100% | 125.4 MiB/s | 770.4 KiB |  00m00s
[170/173] libcom_err-0:1.47.3-2.fc43.x8 100% |   8.7 MiB/s |  26.8 KiB |  00m00s
[171/173] libverto-0:0.3.2-11.fc43.x86_ 100% |  10.1 MiB/s |  20.7 KiB |  00m00s
[172/173] libbrotli-0:1.2.0-1.fc43.x86_ 100% | 113.7 MiB/s | 349.3 KiB |  00m00s
[173/173] libnghttp2-0:1.66.0-3.fc43.x8 100% |  23.1 MiB/s |  71.0 KiB |  00m00s
--------------------------------------------------------------------------------
[173/173] Total                         100% | 187.8 MiB/s |  59.7 MiB |  00m00s
Running transaction
Importing OpenPGP key 0x31645531:
 UserID     : "Fedora (43) <fedora-43-primary@fedoraproject.org>"
 Fingerprint: C6E7F081CF80E13146676E88829B606631645531
 From       : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-43-primary
The key was successfully imported.
[  1/175] Verify package files          100% | 808.0   B/s | 173.0   B |  00m00s
[  2/175] Prepare transaction           100% |   4.6 KiB/s | 173.0   B |  00m00s
[  3/175] Installing libgcc-0:15.3.1-1. 100% | 262.0 MiB/s | 268.3 KiB |  00m00s
[  4/175] Installing publicsuffix-list- 100% |   0.0   B/s |  71.1 KiB |  00m00s
[  5/175] Installing libssh-config-0:0. 100% |   0.0   B/s | 816.0   B |  00m00s
[  6/175] Installing fedora-release-ide 100% | 867.2 KiB/s | 888.0   B |  00m00s
[  7/175] Installing fedora-gpg-keys-0: 100% |  57.8 MiB/s | 355.0 KiB |  00m00s
[  8/175] Installing fedora-repos-0:43- 100% |   0.0   B/s |   5.7 KiB |  00m00s
[  9/175] Installing fedora-release-com 100% |  24.3 MiB/s |  24.8 KiB |  00m00s
[ 10/175] Installing fedora-release-0:4 100% |  15.1 KiB/s | 124.0   B |  00m00s
>>> Running sysusers scriptlet: setup-0:2.15.0-26.fc43.noarch                   
>>> Finished sysusers scriptlet: setup-0:2.15.0-26.fc43.noarch                  
>>> Scriptlet output:                                                           
>>> Creating group 'adm' with GID 4.                                            
>>> Creating group 'audio' with GID 63.                                         
>>> Creating group 'cdrom' with GID 11.                                         
>>> Creating group 'clock' with GID 103.                                        
>>> Creating group 'dialout' with GID 18.                                       
>>> Creating group 'disk' with GID 6.                                           
>>> Creating group 'floppy' with GID 19.                                        
>>> Creating group 'ftp' with GID 50.                                           
>>> Creating group 'games' with GID 20.                                         
>>> Creating group 'input' with GID 104.                                        
>>> Creating group 'kmem' with GID 9.                                           
>>> Creating group 'kvm' with GID 36.                                           
>>> Creating group 'lock' with GID 54.                                          
>>> Creating group 'lp' with GID 7.                                             
>>> Creating group 'mail' with GID 12.                                          
>>> Creating group 'man' with GID 15.                                           
>>> Creating group 'mem' with GID 8.                                            
>>> Creating group 'nobody' with GID 65534.                                     
>>> Creating group 'render' with GID 105.                                       
>>> Creating group 'root' with GID 0.                                           
>>> Creating group 'sgx' with GID 106.                                          
>>> Creating group 'sys' with GID 3.                                            
>>> Creating group 'tape' with GID 33.                                          
>>> Creating group 'tty' with GID 5.                                            
>>> Creating group 'users' with GID 100.                                        
>>> Creating group 'utmp' with GID 22.                                          
>>> Creating group 'video' with GID 39.                                         
>>> Creating group 'wheel' with GID 10.                                         
>>> Creating user 'adm' (adm) with UID 3 and GID 4.                             
>>> Creating group 'bin' with GID 1.                                            
>>> Creating user 'bin' (bin) with UID 1 and GID 1.                             
>>> Creating group 'daemon' with GID 2.                                         
>>> Creating user 'daemon' (daemon) with UID 2 and GID 2.                       
>>> Creating user 'ftp' (FTP User) with UID 14 and GID 50.                      
>>> Creating user 'games' (games) with UID 12 and GID 100.                      
>>> Creating user 'halt' (halt) with UID 7 and GID 0.                           
>>> Creating user 'lp' (lp) with UID 4 and GID 7.                               
>>> Creating user 'mail' (mail) with UID 8 and GID 12.                          
>>> Creating user 'nobody' (Kernel Overflow User) with UID 65534 and GID 65534. 
>>> Creating user 'operator' (operator) with UID 11 and GID 0.                  
>>> Creating user 'root' (Super User) with UID 0 and GID 0.                     
>>> Creating user 'shutdown' (shutdown) with UID 6 and GID 0.                   
>>> Creating user 'sync' (sync) with UID 5 and GID 0.                           
>>>                                                                             
[ 11/175] Installing setup-0:2.15.0-26. 100% |  54.9 MiB/s | 730.6 KiB |  00m00s
>>> [RPM] /etc/hosts created as /etc/hosts.rpmnew                               
[ 12/175] Installing filesystem-0:3.18- 100% |   3.2 MiB/s | 212.8 KiB |  00m00s
[ 13/175] Installing rust-srpm-macros-0 100% |   0.0   B/s |   6.4 KiB |  00m00s
[ 14/175] Installing qt6-srpm-macros-0: 100% |   0.0   B/s | 748.0   B |  00m00s
[ 15/175] Installing qt5-srpm-macros-0: 100% |   0.0   B/s | 776.0   B |  00m00s
[ 16/175] Installing package-notes-srpm 100% |   0.0   B/s |   2.1 KiB |  00m00s
[ 17/175] Installing gnat-srpm-macros-0 100% |   0.0   B/s |   1.3 KiB |  00m00s
[ 18/175] Installing pkgconf-m4-0:2.3.0 100% |   0.0   B/s |  14.8 KiB |  00m00s
[ 19/175] Installing pcre2-syntax-0:10. 100% | 277.7 MiB/s | 284.3 KiB |  00m00s
[ 20/175] Installing gnulib-l10n-0:2024 100% | 215.5 MiB/s | 661.9 KiB |  00m00s
[ 21/175] Installing coreutils-common-0 100% | 451.7 MiB/s |  11.3 MiB |  00m00s
[ 22/175] Installing ncurses-base-0:6.5 100% | 115.1 MiB/s | 353.5 KiB |  00m00s
[ 23/175] Installing bash-0:5.3.0-2.fc4 100% | 301.1 MiB/s |   8.4 MiB |  00m00s
[ 24/175] Installing glibc-common-0:2.4 100% |  67.9 MiB/s |   1.0 MiB |  00m00s
[ 25/175] Installing glibc-gconv-extra- 100% | 316.5 MiB/s |   7.3 MiB |  00m00s
[ 26/175] Installing glibc-0:2.42-17.fc 100% | 202.8 MiB/s |   6.7 MiB |  00m00s
[ 27/175] Installing ncurses-libs-0:6.5 100% | 310.1 MiB/s | 952.8 KiB |  00m00s
[ 28/175] Installing glibc-minimal-lang 100% |   0.0   B/s | 124.0   B |  00m00s
[ 29/175] Installing zlib-ng-compat-0:2 100% | 158.7 MiB/s | 162.6 KiB |  00m00s
[ 30/175] Installing bzip2-libs-0:1.0.8 100% |   0.0   B/s |  81.7 KiB |  00m00s
[ 31/175] Installing libgpg-error-0:1.5 100% |  64.3 MiB/s | 921.1 KiB |  00m00s
[ 32/175] Installing libstdc++-0:15.3.1 100% | 407.0 MiB/s |   2.8 MiB |  00m00s
[ 33/175] Installing xz-libs-1:5.8.1-4. 100% | 213.8 MiB/s | 218.9 KiB |  00m00s
[ 34/175] Installing libassuan-0:2.5.7- 100% | 161.7 MiB/s | 165.6 KiB |  00m00s
[ 35/175] Installing libgcrypt-0:1.11.1 100% | 393.7 MiB/s |   1.6 MiB |  00m00s
[ 36/175] Installing readline-0:8.3-2.f 100% | 501.8 MiB/s | 513.9 KiB |  00m00s
[ 37/175] Installing gmp-1:6.3.0-4.fc43 100% | 397.2 MiB/s | 813.5 KiB |  00m00s
[ 38/175] Installing libuuid-0:2.41.5-1 100% |   0.0   B/s |  38.4 KiB |  00m00s
[ 39/175] Installing libacl-0:2.4.0-1.f 100% |   0.0   B/s |  40.7 KiB |  00m00s
[ 40/175] Installing popt-0:1.19-9.fc43 100% |  68.1 MiB/s | 139.4 KiB |  00m00s
[ 41/175] Installing libzstd-0:1.5.7-2. 100% | 391.2 MiB/s | 801.1 KiB |  00m00s
[ 42/175] Installing elfutils-libelf-0: 100% | 479.6 MiB/s |   1.4 MiB |  00m00s
[ 43/175] Installing npth-0:1.8-3.fc43. 100% |   0.0   B/s |  50.7 KiB |  00m00s
[ 44/175] Installing libblkid-0:2.41.5- 100% | 257.3 MiB/s | 263.4 KiB |  00m00s
[ 45/175] Installing libxcrypt-0:4.5.2- 100% | 281.3 MiB/s | 288.0 KiB |  00m00s
[ 46/175] Installing sqlite-libs-0:3.50 100% | 379.1 MiB/s |   1.5 MiB |  00m00s
[ 47/175] Installing gnupg2-gpgconf-0:2 100% |  20.5 MiB/s | 252.1 KiB |  00m00s
[ 48/175] Installing json-c-0:0.18-7.fc 100% |   0.0   B/s |  84.0 KiB |  00m00s
[ 49/175] Installing libunistring-0:1.1 100% | 431.7 MiB/s |   1.7 MiB |  00m00s
[ 50/175] Installing libidn2-0:2.3.8-2. 100% | 272.8 MiB/s | 558.7 KiB |  00m00s
[ 51/175] Installing libtasn1-0:4.21.0- 100% |  24.9 MiB/s | 178.6 KiB |  00m00s
[ 52/175] Installing crypto-policies-0: 100% |  42.0 MiB/s | 172.2 KiB |  00m00s
[ 53/175] Installing gnupg2-verify-0:2. 100% |  28.5 MiB/s | 349.9 KiB |  00m00s
[ 54/175] Installing dwz-0:0.16-2.fc43. 100% |  25.6 MiB/s | 288.5 KiB |  00m00s
[ 55/175] Installing mpfr-0:4.2.2-2.fc4 100% | 407.4 MiB/s | 834.4 KiB |  00m00s
[ 56/175] Installing gawk-0:5.3.2-2.fc4 100% | 113.5 MiB/s |   1.8 MiB |  00m00s
[ 57/175] Installing libksba-0:1.6.7-4. 100% | 391.7 MiB/s | 401.1 KiB |  00m00s
[ 58/175] Installing unzip-0:6.0-67.fc4 100% |  34.6 MiB/s | 389.8 KiB |  00m00s
[ 59/175] Installing file-libs-0:5.46-9 100% | 741.3 MiB/s |  11.9 MiB |  00m00s
[ 60/175] Installing file-0:5.46-9.fc43 100% |   9.0 MiB/s | 101.7 KiB |  00m00s
[ 61/175] Installing libeconf-0:0.7.9-2 100% |   0.0   B/s |  66.5 KiB |  00m00s
[ 62/175] Installing libsepol-0:3.9-2.f 100% | 401.8 MiB/s | 822.9 KiB |  00m00s
[ 63/175] Installing lz4-libs-0:1.10.0- 100% | 158.6 MiB/s | 162.5 KiB |  00m00s
[ 64/175] Installing libattr-0:2.6.0-1. 100% |   0.0   B/s |  25.2 KiB |  00m00s
[ 65/175] Installing pcre2-0:10.47-1.fc 100% | 343.8 MiB/s | 704.1 KiB |  00m00s
[ 66/175] Installing libselinux-0:3.9-5 100% | 189.8 MiB/s | 194.4 KiB |  00m00s
[ 67/175] Installing grep-0:3.12-2.fc43 100% |  71.6 MiB/s |   1.0 MiB |  00m00s
[ 68/175] Installing findutils-1:4.10.0 100% | 123.9 MiB/s |   1.9 MiB |  00m00s
[ 69/175] Installing sed-0:4.9-5.fc43.x 100% |  65.0 MiB/s | 865.5 KiB |  00m00s
[ 70/175] Installing xz-1:5.8.1-4.fc43. 100% |  88.8 MiB/s |   1.3 MiB |  00m00s
[ 71/175] Installing libmount-0:2.41.5- 100% | 368.9 MiB/s | 377.7 KiB |  00m00s
[ 72/175] Installing libsmartcols-0:2.4 100% | 177.2 MiB/s | 181.5 KiB |  00m00s
[ 73/175] Installing libcap-ng-0:0.9.6- 100% |   0.0   B/s |  70.6 KiB |  00m00s
[ 74/175] Installing audit-libs-0:4.2.1 100% | 375.9 MiB/s | 384.9 KiB |  00m00s
[ 75/175] Installing pam-libs-0:1.7.1-5 100% | 125.7 MiB/s | 128.8 KiB |  00m00s
[ 76/175] Installing libcap-0:2.76-4.fc 100% |  17.4 MiB/s | 214.3 KiB |  00m00s
[ 77/175] Installing systemd-libs-0:258 100% | 391.3 MiB/s |   2.3 MiB |  00m00s
[ 78/175] Installing lua-libs-0:5.4.8-4 100% | 276.7 MiB/s | 283.3 KiB |  00m00s
[ 79/175] Installing libffi-0:3.5.2-1.f 100% |  83.2 MiB/s |  85.2 KiB |  00m00s
[ 80/175] Installing p11-kit-0:0.26.5-1 100% | 141.4 MiB/s |   2.5 MiB |  00m00s
[ 81/175] Installing alternatives-0:1.3 100% |   5.7 MiB/s |  63.8 KiB |  00m00s
[ 82/175] Installing p11-kit-trust-0:0. 100% |  24.0 MiB/s | 467.9 KiB |  00m00s
[ 83/175] Installing openssl-libs-1:3.5 100% | 405.6 MiB/s |   8.9 MiB |  00m00s
[ 84/175] Installing coreutils-0:9.7-10 100% | 181.0 MiB/s |   5.4 MiB |  00m00s
[ 85/175] Installing ca-certificates-0: 100% |   2.5 MiB/s |   2.5 MiB |  00m01s
[ 86/175] Installing gzip-0:1.13-4.fc43 100% |  29.6 MiB/s | 394.4 KiB |  00m00s
[ 87/175] Installing libfsverity-0:1.6- 100% |   0.0   B/s |  29.5 KiB |  00m00s
[ 88/175] Installing rpm-sequoia-0:1.10 100% | 350.2 MiB/s |   2.5 MiB |  00m00s
[ 89/175] Installing libevent-0:2.1.13- 100% | 289.1 MiB/s | 888.2 KiB |  00m00s
[ 90/175] Installing util-linux-core-0: 100% |  92.2 MiB/s |   1.5 MiB |  00m00s
[ 91/175] Installing libusb1-0:1.0.30-1 100% |  21.7 MiB/s | 177.7 KiB |  00m00s
>>> Running sysusers scriptlet: tpm2-tss-0:4.1.3-8.fc43.x86_64                  
>>> Finished sysusers scriptlet: tpm2-tss-0:4.1.3-8.fc43.x86_64                 
>>> Scriptlet output:                                                           
>>> Creating group 'tss' with GID 59.                                           
>>> Creating user 'tss' (Account used for TPM access) with UID 59 and GID 59.   
>>>                                                                             
[ 92/175] Installing tpm2-tss-0:4.1.3-8 100% | 314.4 MiB/s |   1.6 MiB |  00m00s
[ 93/175] Installing ima-evm-utils-libs 100% |   0.0   B/s |  62.0 KiB |  00m00s
[ 94/175] Installing gnupg2-gpg-agent-0 100% |  34.7 MiB/s | 675.4 KiB |  00m00s
[ 95/175] Installing systemd-standalone 100% |  24.3 MiB/s | 298.1 KiB |  00m00s
[ 96/175] Installing rpm-libs-0:6.0.2-1 100% | 304.4 MiB/s | 935.1 KiB |  00m00s
[ 97/175] Installing liblastlog2-0:2.41 100% |   6.4 MiB/s |  39.5 KiB |  00m00s
[ 98/175] Installing libsemanage-0:3.9- 100% | 151.5 MiB/s | 310.2 KiB |  00m00s
[ 99/175] Installing tar-2:1.35-6.fc43. 100% | 155.7 MiB/s |   3.0 MiB |  00m00s
[100/175] Installing zstd-0:1.5.7-2.fc4 100% | 114.0 MiB/s |   1.7 MiB |  00m00s
[101/175] Installing zip-0:3.0-44.fc43. 100% |  56.8 MiB/s | 698.4 KiB |  00m00s
[102/175] Installing gnupg2-keyboxd-0:2 100% |  33.0 MiB/s | 202.7 KiB |  00m00s
[103/175] Installing libpsl-0:0.21.5-6. 100% |  75.7 MiB/s |  77.5 KiB |  00m00s
[104/175] Installing libfdisk-0:2.41.5- 100% | 372.5 MiB/s | 381.4 KiB |  00m00s
[105/175] Installing nettle-0:3.10.1-2. 100% | 387.5 MiB/s | 793.7 KiB |  00m00s
[106/175] Installing gnutls-0:3.8.13-1. 100% | 418.6 MiB/s |   3.8 MiB |  00m00s
[107/175] Installing libxml2-0:2.12.10- 100% | 106.5 MiB/s |   1.7 MiB |  00m00s
[108/175] Installing libarchive-0:3.8.4 100% | 311.6 MiB/s | 957.2 KiB |  00m00s
[109/175] Installing bzip2-0:1.0.8-21.f 100% |   8.9 MiB/s |  99.8 KiB |  00m00s
[110/175] Installing add-determinism-0: 100% | 143.9 MiB/s |   2.3 MiB |  00m00s
[111/175] Installing build-reproducibil 100% |   0.0   B/s |   1.0 KiB |  00m00s
[112/175] Installing cpio-0:2.15-6.fc43 100% |  78.5 MiB/s |   1.1 MiB |  00m00s
[113/175] Installing diffutils-0:3.12-3 100% | 104.1 MiB/s |   1.6 MiB |  00m00s
[114/175] Installing ed-0:1.22.2-1.fc43 100% |  13.3 MiB/s | 150.4 KiB |  00m00s
[115/175] Installing patch-0:2.8-2.fc43 100% |  19.9 MiB/s | 224.3 KiB |  00m00s
[116/175] Installing jansson-0:2.14-3.f 100% |  88.3 MiB/s |  90.5 KiB |  00m00s
[117/175] Installing libgomp-0:15.3.1-1 100% | 265.2 MiB/s | 543.2 KiB |  00m00s
[118/175] Installing libpkgconf-0:2.3.0 100% |   0.0   B/s |  79.2 KiB |  00m00s
[119/175] Installing pkgconf-0:2.3.0-3. 100% |   8.1 MiB/s |  91.0 KiB |  00m00s
[120/175] Installing pkgconf-pkg-config 100% | 161.2 KiB/s |   1.8 KiB |  00m00s
[121/175] Installing gdbm-libs-1:1.23-1 100% | 128.5 MiB/s | 131.6 KiB |  00m00s
[122/175] Installing cyrus-sasl-lib-0:2 100% | 143.5 MiB/s |   2.3 MiB |  00m00s
[123/175] Installing libpfm-0:4.13.0-20 100% | 573.5 MiB/s |   1.7 MiB |  00m00s
[124/175] Installing libtool-ltdl-0:2.5 100% |   0.0   B/s |  71.2 KiB |  00m00s
[125/175] Installing openldap-0:2.6.14- 100% | 323.5 MiB/s | 662.5 KiB |  00m00s
[126/175] Installing gnupg2-dirmngr-0:2 100% |  31.9 MiB/s | 621.1 KiB |  00m00s
[127/175] Installing gnupg2-0:2.4.9-5.f 100% | 243.1 MiB/s |   6.6 MiB |  00m00s
[128/175] Installing rpm-sign-libs-0:6. 100% |   0.0   B/s |  40.5 KiB |  00m00s
[129/175] Installing gpgverify-0:2.2-3. 100% |   0.0   B/s |   9.4 KiB |  00m00s
[130/175] Installing xxhash-libs-0:0.8. 100% |  89.2 MiB/s |  91.4 KiB |  00m00s
[131/175] Installing keyutils-libs-0:1. 100% |   0.0   B/s |  55.7 KiB |  00m00s
[132/175] Installing libcom_err-0:1.47. 100% |   0.0   B/s |  64.2 KiB |  00m00s
[133/175] Installing libverto-0:0.3.2-1 100% |  26.6 MiB/s |  27.2 KiB |  00m00s
[134/175] Installing krb5-libs-0:1.22.2 100% | 333.1 MiB/s |   2.3 MiB |  00m00s
[135/175] Installing libssh-0:0.11.5-1. 100% | 280.8 MiB/s | 575.1 KiB |  00m00s
[136/175] Installing libbrotli-0:1.2.0- 100% | 282.4 MiB/s | 867.7 KiB |  00m00s
[137/175] Installing libnghttp2-0:1.66. 100% | 159.4 MiB/s | 163.2 KiB |  00m00s
[138/175] Installing libcurl-0:8.15.0-1 100% | 295.6 MiB/s | 908.1 KiB |  00m00s
[139/175] Installing curl-0:8.15.0-10.f 100% |  21.6 MiB/s | 463.9 KiB |  00m00s
[140/175] Installing rpm-0:6.0.2-1.fc43 100% |  85.8 MiB/s |   2.6 MiB |  00m00s
[141/175] Installing cmake-srpm-macros- 100% |   0.0   B/s | 804.0   B |  00m00s
[142/175] Installing efi-srpm-macros-0: 100% |   0.0   B/s |  41.1 KiB |  00m00s
[143/175] Installing java-srpm-macros-0 100% |   0.0   B/s |   1.1 KiB |  00m00s
[144/175] Installing lua-srpm-macros-0: 100% |   0.0   B/s |   1.9 KiB |  00m00s
[145/175] Installing tree-sitter-srpm-m 100% |   0.0   B/s |   9.3 KiB |  00m00s
[146/175] Installing zig-srpm-macros-0: 100% |   0.0   B/s |   1.7 KiB |  00m00s
[147/175] Installing filesystem-srpm-ma 100% |   0.0   B/s |  38.9 KiB |  00m00s
[148/175] Installing elfutils-default-y 100% | 340.5 KiB/s |   2.0 KiB |  00m00s
[149/175] Installing elfutils-libs-0:0. 100% | 227.0 MiB/s | 697.2 KiB |  00m00s
[150/175] Installing elfutils-debuginfo 100% |   6.5 MiB/s |  86.2 KiB |  00m00s
[151/175] Installing elfutils-0:0.196-1 100% | 163.7 MiB/s |   3.1 MiB |  00m00s
[152/175] Installing binutils-0:2.45.1- 100% | 360.2 MiB/s |  27.4 MiB |  00m00s
[153/175] Installing gdb-minimal-0:17.2 100% | 309.5 MiB/s |  13.6 MiB |  00m00s
[154/175] Installing debugedit-0:5.2-3. 100% |  17.7 MiB/s | 217.3 KiB |  00m00s
[155/175] Installing rpm-build-libs-0:6 100% | 258.9 MiB/s | 265.1 KiB |  00m00s
[156/175] Installing perl-srpm-macros-0 100% |   0.0   B/s |   1.1 KiB |  00m00s
[157/175] Installing openblas-srpm-macr 100% |   0.0   B/s | 392.0   B |  00m00s
[158/175] Installing ocaml-srpm-macros- 100% |   0.0   B/s |   2.1 KiB |  00m00s
[159/175] Installing kernel-srpm-macros 100% |   0.0   B/s |   2.3 KiB |  00m00s
[160/175] Installing ghc-srpm-macros-0: 100% |   0.0   B/s |   1.0 KiB |  00m00s
[161/175] Installing gap-srpm-macros-0: 100% |   0.0   B/s |   2.7 KiB |  00m00s
[162/175] Installing fpc-srpm-macros-0: 100% |   0.0   B/s | 420.0   B |  00m00s
[163/175] Installing ansible-srpm-macro 100% |   0.0   B/s |  36.2 KiB |  00m00s
[164/175] Installing gnome-srpm-macros- 100% |   0.0   B/s |   4.1 KiB |  00m00s
[165/175] Installing rpm-build-0:6.0.2- 100% |  22.2 MiB/s | 295.6 KiB |  00m00s
[166/175] Installing pyproject-srpm-mac 100% |   0.0   B/s |   4.0 KiB |  00m00s
[167/175] Installing redhat-rpm-config- 100% | 184.7 MiB/s | 189.1 KiB |  00m00s
[168/175] Installing forge-srpm-macros- 100% |   0.0   B/s |  40.3 KiB |  00m00s
[169/175] Installing fonts-srpm-macros- 100% |   0.0   B/s |  57.0 KiB |  00m00s
[170/175] Installing go-srpm-macros-0:3 100% |   0.0   B/s |  63.0 KiB |  00m00s
[171/175] Installing python-srpm-macros 100% |  51.6 MiB/s |  52.8 KiB |  00m00s
[172/175] Installing util-linux-0:2.41. 100% | 104.8 MiB/s |   3.6 MiB |  00m00s
[173/175] Installing shadow-utils-2:4.1 100% | 147.0 MiB/s |   4.0 MiB |  00m00s
[174/175] Installing which-0:2.23-3.fc4 100% |   7.0 MiB/s |  85.7 KiB |  00m00s
[175/175] Installing info-0:7.2-7.fc43. 100% | 262.8 KiB/s | 354.3 KiB |  00m01s
Complete!
Finish: installing minimal buildroot with dnf5
Start: creating root cache
Finish: creating root cache
Finish: chroot init
INFO: Installed packages:
INFO: add-determinism-0.6.0-3.fc43.x86_64
alternatives-1.33-3.fc43.x86_64
ansible-srpm-macros-1-18.1.fc43.noarch
audit-libs-4.2.1-1.fc43.x86_64
bash-5.3.0-2.fc43.x86_64
binutils-2.45.1-5.fc43.x86_64
build-reproducibility-srpm-macros-0.6.0-3.fc43.noarch
bzip2-1.0.8-21.fc43.x86_64
bzip2-libs-1.0.8-21.fc43.x86_64
ca-certificates-2026.2.90_v9.0.317-1.fc43.noarch
cmake-srpm-macros-3.31.11-1.fc43.noarch
coreutils-9.7-10.fc43.x86_64
coreutils-common-9.7-10.fc43.x86_64
cpio-2.15-6.fc43.x86_64
crypto-policies-20251125-1.git63291f8.fc43.noarch
curl-8.15.0-10.fc43.x86_64
cyrus-sasl-lib-2.1.28-33.fc43.x86_64
debugedit-5.2-3.fc43.x86_64
diffutils-3.12-3.fc43.x86_64
dwz-0.16-2.fc43.x86_64
ed-1.22.2-1.fc43.x86_64
efi-srpm-macros-6-4.fc43.noarch
elfutils-0.196-1.fc43.x86_64
elfutils-debuginfod-client-0.196-1.fc43.x86_64
elfutils-default-yama-scope-0.196-1.fc43.noarch
elfutils-libelf-0.196-1.fc43.x86_64
elfutils-libs-0.196-1.fc43.x86_64
fedora-gpg-keys-43-2.noarch
fedora-release-43-27.noarch
fedora-release-common-43-27.noarch
fedora-release-identity-basic-43-27.noarch
fedora-repos-43-2.noarch
file-5.46-9.fc43.x86_64
file-libs-5.46-9.fc43.x86_64
filesystem-3.18-50.fc43.x86_64
filesystem-srpm-macros-3.18-50.fc43.noarch
findutils-4.10.0-6.fc43.x86_64
fonts-srpm-macros-2.0.5-23.fc43.noarch
forge-srpm-macros-0.4.0-3.fc43.noarch
fpc-srpm-macros-1.3-15.fc43.noarch
gap-srpm-macros-2-1.fc43.noarch
gawk-5.3.2-2.fc43.x86_64
gdb-minimal-17.2-2.fc43.x86_64
gdbm-libs-1.23-10.fc43.x86_64
ghc-srpm-macros-1.9.2-3.fc43.noarch
glibc-2.42-17.fc43.x86_64
glibc-common-2.42-17.fc43.x86_64
glibc-gconv-extra-2.42-17.fc43.x86_64
glibc-minimal-langpack-2.42-17.fc43.x86_64
gmp-6.3.0-4.fc43.x86_64
gnat-srpm-macros-7-1.fc43.noarch
gnome-srpm-macros-1.0-1.fc43.noarch
gnulib-l10n-20241231-1.fc43.noarch
gnupg2-2.4.9-5.fc43.x86_64
gnupg2-dirmngr-2.4.9-5.fc43.x86_64
gnupg2-gpg-agent-2.4.9-5.fc43.x86_64
gnupg2-gpgconf-2.4.9-5.fc43.x86_64
gnupg2-keyboxd-2.4.9-5.fc43.x86_64
gnupg2-verify-2.4.9-5.fc43.x86_64
gnutls-3.8.13-1.fc43.x86_64
go-srpm-macros-3.8.0-1.fc43.noarch
gpg-pubkey-c6e7f081cf80e13146676e88829b606631645531-66b6dccf
gpgverify-2.2-3.fc43.noarch
grep-3.12-2.fc43.x86_64
gzip-1.13-4.fc43.x86_64
ima-evm-utils-libs-1.6.2-6.fc43.x86_64
info-7.2-7.fc43.x86_64
jansson-2.14-3.fc43.x86_64
java-srpm-macros-1-7.fc43.noarch
json-c-0.18-7.fc43.x86_64
kernel-srpm-macros-1.0-27.fc43.noarch
keyutils-libs-1.6.3-6.fc43.x86_64
krb5-libs-1.22.2-4.fc43.x86_64
libacl-2.4.0-1.fc43.x86_64
libarchive-3.8.4-1.fc43.x86_64
libassuan-2.5.7-4.fc43.x86_64
libattr-2.6.0-1.fc43.x86_64
libblkid-2.41.5-1.fc43.x86_64
libbrotli-1.2.0-1.fc43.x86_64
libcap-2.76-4.fc43.x86_64
libcap-ng-0.9.6-1.fc43.x86_64
libcom_err-1.47.3-2.fc43.x86_64
libcurl-8.15.0-10.fc43.x86_64
libeconf-0.7.9-2.fc43.x86_64
libevent-2.1.13-1.fc43.x86_64
libfdisk-2.41.5-1.fc43.x86_64
libffi-3.5.2-1.fc43.x86_64
libfsverity-1.6-3.fc43.x86_64
libgcc-15.3.1-1.fc43.x86_64
libgcrypt-1.11.1-4.fc43.x86_64
libgomp-15.3.1-1.fc43.x86_64
libgpg-error-1.55-2.fc43.x86_64
libidn2-2.3.8-2.fc43.x86_64
libksba-1.6.7-4.fc43.x86_64
liblastlog2-2.41.5-1.fc43.x86_64
libmount-2.41.5-1.fc43.x86_64
libnghttp2-1.66.0-3.fc43.x86_64
libpfm-4.13.0-20.fc43.x86_64
libpkgconf-2.3.0-3.fc43.x86_64
libpsl-0.21.5-6.fc43.x86_64
libselinux-3.9-5.fc43.x86_64
libsemanage-3.9-4.fc43.x86_64
libsepol-3.9-2.fc43.x86_64
libsmartcols-2.41.5-1.fc43.x86_64
libssh-0.11.5-1.fc43.x86_64
libssh-config-0.11.5-1.fc43.noarch
libstdc++-15.3.1-1.fc43.x86_64
libtasn1-4.21.0-1.fc43.x86_64
libtool-ltdl-2.5.4-8.fc43.x86_64
libunistring-1.1-10.fc43.x86_64
libusb1-1.0.30-1.fc43.x86_64
libuuid-2.41.5-1.fc43.x86_64
libverto-0.3.2-11.fc43.x86_64
libxcrypt-4.5.2-1.fc43.x86_64
libxml2-2.12.10-5.fc43.x86_64
libzstd-1.5.7-2.fc43.x86_64
lua-libs-5.4.8-4.fc43.x86_64
lua-srpm-macros-1-16.fc43.noarch
lz4-libs-1.10.0-3.fc43.x86_64
mpfr-4.2.2-2.fc43.x86_64
ncurses-base-6.5-7.20250614.fc43.noarch
ncurses-libs-6.5-7.20250614.fc43.x86_64
nettle-3.10.1-2.fc43.x86_64
npth-1.8-3.fc43.x86_64
ocaml-srpm-macros-11-2.fc43.noarch
openblas-srpm-macros-2-20.fc43.noarch
openldap-2.6.14-1.fc43.x86_64
openssl-libs-3.5.8-1.fc43.x86_64
p11-kit-0.26.5-1.fc43.x86_64
p11-kit-trust-0.26.5-1.fc43.x86_64
package-notes-srpm-macros-0.20-1.fc43.noarch
pam-libs-1.7.1-5.fc43.x86_64
patch-2.8-2.fc43.x86_64
pcre2-10.47-1.fc43.x86_64
pcre2-syntax-10.47-1.fc43.noarch
perl-srpm-macros-1-60.fc43.noarch
pkgconf-2.3.0-3.fc43.x86_64
pkgconf-m4-2.3.0-3.fc43.noarch
pkgconf-pkg-config-2.3.0-3.fc43.x86_64
popt-1.19-9.fc43.x86_64
publicsuffix-list-dafsa-20260116-1.fc43.noarch
pyproject-srpm-macros-1.23.2-1.fc43.noarch
python-srpm-macros-3.14-5.fc43.noarch
qt5-srpm-macros-5.15.18-1.fc43.noarch
qt6-srpm-macros-6.10.3-1.fc43.noarch
readline-8.3-2.fc43.x86_64
redhat-rpm-config-343-14.fc43.noarch
rpm-6.0.2-1.fc43.x86_64
rpm-build-6.0.2-1.fc43.x86_64
rpm-build-libs-6.0.2-1.fc43.x86_64
rpm-libs-6.0.2-1.fc43.x86_64
rpm-sequoia-1.10.3-1.fc43.x86_64
rpm-sign-libs-6.0.2-1.fc43.x86_64
rust-srpm-macros-28.5-1.fc43.noarch
sed-4.9-5.fc43.x86_64
setup-2.15.0-26.fc43.noarch
shadow-utils-4.18.0-3.fc43.x86_64
sqlite-libs-3.50.2-3.fc43.x86_64
systemd-libs-258.11-1.fc43.x86_64
systemd-standalone-sysusers-258.11-1.fc43.x86_64
tar-1.35-6.fc43.x86_64
tpm2-tss-4.1.3-8.fc43.x86_64
tree-sitter-srpm-macros-0.4.2-1.fc43.noarch
unzip-6.0-67.fc43.x86_64
util-linux-2.41.5-1.fc43.x86_64
util-linux-core-2.41.5-1.fc43.x86_64
which-2.23-3.fc43.x86_64
xxhash-libs-0.8.4-1.fc43.x86_64
xz-5.8.1-4.fc43.x86_64
xz-libs-5.8.1-4.fc43.x86_64
zig-srpm-macros-1-5.fc43.noarch
zip-3.0-44.fc43.x86_64
zlib-ng-compat-2.3.3-2.fc43.x86_64
zstd-1.5.7-2.fc43.x86_64
Start: buildsrpm
Start: rpmbuild -bs
Building target platforms: x86_64
Building for target x86_64
setting SOURCE_DATE_EPOCH=1790208000
Wrote: /builddir/build/SRPMS/conglomerate-1.6.80-1.20120308git166303d.fc43.src.rpm
Finish: rpmbuild -bs
INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan
INFO: /var/lib/mock/fedora-43-x86_64-1791435628.862660/root/var/log/dnf5.log
INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz
/bin/tar: Removing leading `/' from member names
Finish: buildsrpm
INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-twaq403s/conglomerate/conglomerate.spec) Config(child) 0 minutes 17 seconds
INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results
INFO: Cleaning up build root ('cleanup_on_success=True')
Start: clean chroot
INFO: unmounting tmpfs.
Finish: clean chroot
INFO: Start(/var/lib/copr-rpmbuild/results/conglomerate-1.6.80-1.20120308git166303d.fc43.src.rpm)  Config(fedora-43-x86_64)
Start(bootstrap): chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-43-x86_64-bootstrap-1791435628.862660/root.
INFO: reusing tmpfs at /var/lib/mock/fedora-43-x86_64-bootstrap-1791435628.862660/root.
INFO: calling preinit hooks
INFO: enabled root cache
INFO: enabled package manager cache
Start(bootstrap): cleaning package manager metadata
Finish(bootstrap): cleaning package manager metadata
Finish(bootstrap): chroot init
Start: chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-43-x86_64-1791435628.862660/root.
INFO: calling preinit hooks
INFO: enabled root cache
Start: unpacking root cache
Finish: unpacking root cache
INFO: enabled package manager cache
Start: cleaning package manager metadata
Finish: cleaning package manager metadata
INFO: enabled HW Info plugin
INFO: Buildroot is handled by package management downloaded with a bootstrap image:
  rpm-6.0.2-1.fc43.x86_64
  rpm-sequoia-1.10.3-1.fc43.x86_64
  dnf5-5.2.18.0-5.fc43.x86_64
  dnf5-plugins-5.2.18.0-5.fc43.x86_64
Finish: chroot init
Start: build phase for conglomerate-1.6.80-1.20120308git166303d.fc43.src.rpm
Start: build setup for conglomerate-1.6.80-1.20120308git166303d.fc43.src.rpm
Building target platforms: x86_64
Building for target x86_64
setting SOURCE_DATE_EPOCH=1790208000
Wrote: /builddir/build/SRPMS/conglomerate-1.6.80-1.20120308git166303d.fc43.src.rpm
Updating and loading repositories:
 Copr repository                        100% | 109.4 KiB/s |   1.5 KiB |  00m00s
 fedora                                 100% | 125.6 KiB/s |  25.2 KiB |  00m00s
 updates                                100% | 161.4 KiB/s |  22.6 KiB |  00m00s
Repositories loaded.
Package                               Arch   Version                         Repository      Size
Installing:
 autoconf                             noarch 2.72-7.fc43                     fedora       2.8 MiB
 automake                             noarch 1.18.1-2.fc43                   fedora       1.8 MiB
 bicpl-devel                          x86_64 2.0.0-1.20260106git8be98a9.fc43 copr_base  196.8 KiB
 gcc                                  x86_64 15.3.1-1.fc43                   updates    112.9 MiB
 gcc-c++                              x86_64 15.3.1-1.fc43                   updates     41.8 MiB
 libminc-devel                        x86_64 2.4.03-27.fc43                  fedora     359.1 KiB
 libtool                              x86_64 2.5.4-8.fc43                    updates      2.7 MiB
 make                                 x86_64 1:4.4.1-11.fc43                 fedora       1.8 MiB
 netcdf-devel                         x86_64 4.9.2-15.fc43                   fedora     371.4 KiB
 perl-Getopt-Tabular                  noarch 0.3-32.fc43                     fedora      86.8 KiB
 perl-MNI                             noarch 0.08-1.20110321git075ae53.fc43  copr_base  439.5 KiB
 perl-interpreter                     x86_64 4:5.42.3-524.fc43               updates    118.8 KiB
 zlib-ng-compat-devel                 x86_64 2.3.3-2.fc43                    updates    107.0 KiB
Installing dependencies:
 ImageMagick                          x86_64 1:7.1.2.32-1.fc43               updates     88.0 KiB
 ImageMagick-libs                     x86_64 1:7.1.2.32-1.fc43               updates      9.0 MiB
 LibRaw                               x86_64 0.21.5-1.fc43                   updates      2.3 MiB
 abattis-cantarell-vf-fonts           noarch 0.301-15.fc43                   fedora     192.7 KiB
 adobe-mappings-cmap                  noarch 20231115-3.fc43                 fedora      15.2 MiB
 adobe-mappings-cmap-deprecated       noarch 20231115-3.fc43                 fedora     582.1 KiB
 adobe-mappings-pdf                   noarch 20190401-10.fc43                fedora       4.4 MiB
 annobin-docs                         noarch 12.99-1.fc43                    fedora      98.9 KiB
 annobin-plugin-gcc                   x86_64 12.99-1.fc43                    fedora       1.0 MiB
 avahi-libs                           x86_64 0.9~rc2-6.fc43                  fedora     171.6 KiB
 bicpl                                x86_64 2.0.0-1.20260106git8be98a9.fc43 copr_base    1.3 MiB
 blosc                                x86_64 1.21.6-7.fc43                   fedora     126.2 KiB
 brotli                               x86_64 1.2.0-1.fc43                    updates     33.6 KiB
 brotli-devel                         x86_64 1.2.0-1.fc43                    updates     65.9 KiB
 bubblewrap                           x86_64 0.12.0-1.fc43                   updates    139.8 KiB
 cairo                                x86_64 1.18.4-2.fc43                   fedora       1.8 MiB
 cairo-gobject                        x86_64 1.18.4-2.fc43                   fedora      31.1 KiB
 cmake                                x86_64 3.31.11-1.fc43                  updates     34.5 MiB
 cmake-data                           noarch 3.31.11-1.fc43                  updates      8.5 MiB
 cmake-filesystem                     x86_64 3.31.11-1.fc43                  updates      0.0   B
 cmake-rpm-macros                     noarch 3.31.11-1.fc43                  updates      8.2 KiB
 cpp                                  x86_64 15.3.1-1.fc43                   updates     38.4 MiB
 cups-filesystem                      noarch 1:2.4.19-3.fc43                 updates      0.0   B
 cups-libs                            x86_64 1:2.4.19-3.fc43                 updates    618.5 KiB
 dbus-libs                            x86_64 1:1.16.2-1.fc43                 updates    345.4 KiB
 default-fonts-core-sans              noarch 4.2-5.fc43                      fedora      11.9 KiB
 emacs-filesystem                     noarch 1:30.0-5.fc43                   fedora       0.0   B
 expat                                x86_64 2.8.3-1.fc43                    updates    322.3 KiB
 fftw-libs-double                     x86_64 3.3.10-16.fc43                  fedora       3.4 MiB
 fontconfig                           x86_64 2.17.0-3.fc43                   fedora     765.9 KiB
 fonts-filesystem                     noarch 1:2.0.5-23.fc43                 fedora       0.0   B
 freetype                             x86_64 2.13.3-3.fc43                   fedora     850.2 KiB
 fribidi                              x86_64 1.0.16-3.fc43                   fedora     190.3 KiB
 gcc-gfortran                         x86_64 15.3.1-1.fc43                   updates     40.8 MiB
 gcc-plugin-annobin                   x86_64 15.3.1-1.fc43                   updates     57.2 KiB
 gdk-pixbuf2                          x86_64 2.44.6^really2.44.4-3.fc43      updates      2.5 MiB
 gettext                              x86_64 0.25.1-2.fc43                   fedora      12.9 MiB
 gettext-common-devel                 noarch 0.25.1-2.fc43                   fedora     592.5 KiB
 gettext-devel                        x86_64 0.25.1-2.fc43                   fedora       1.3 MiB
 gettext-envsubst                     x86_64 0.25.1-2.fc43                   fedora      74.8 KiB
 gettext-libs                         x86_64 0.25.1-2.fc43                   fedora       2.2 MiB
 gettext-runtime                      x86_64 0.25.1-2.fc43                   fedora     444.2 KiB
 glib2                                x86_64 2.86.5-1.fc43                   updates     15.0 MiB
 glibc-devel                          x86_64 2.42-17.fc43                    updates      2.3 MiB
 glycin-libs                          x86_64 2.0.8-1.fc43                    updates      4.2 MiB
 glycin-loaders                       x86_64 2.0.8-1.fc43                    updates     12.7 MiB
 google-droid-sans-fonts              noarch 20200215-23.fc43                fedora       6.3 MiB
 google-noto-fonts-common             noarch 20251101-2.fc43                 updates     17.7 KiB
 google-noto-sans-vf-fonts            noarch 20251101-2.fc43                 updates      1.4 MiB
 graphite2                            x86_64 1.3.14-19.fc43                  fedora     191.8 KiB
 graphviz-libs                        x86_64 13.1.2-3.fc43                   updates      1.2 MiB
 groff-base                           x86_64 1.23.0-11.fc43                  updates      3.8 MiB
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 perl-diagnostics                     noarch 1.40-524.fc43                   updates    471.3 KiB
 perl-doc                             noarch 5.42.3-524.fc43                 updates     11.5 MiB
 perl-encoding                        x86_64 4:3.00-520.fc43                 fedora     149.5 KiB
 perl-encoding-warnings               noarch 0.14-524.fc43                   updates     10.1 KiB
 perl-experimental                    noarch 0.036-2.fc43                    fedora      43.4 KiB
 perl-fields                          noarch 2.27-524.fc43                   updates     11.9 KiB
 perl-filetest                        noarch 1.03-524.fc43                   updates      6.4 KiB
 perl-if                              noarch 0.61.000-524.fc43               updates      5.8 KiB
 perl-inc-latest                      noarch 2:0.500-31.fc43                 fedora      34.6 KiB
 perl-less                            noarch 0.03-524.fc43                   updates      4.9 KiB
 perl-lib                             x86_64 0.65-524.fc43                   updates      8.5 KiB
 perl-libnet                          noarch 3.15-521.fc43                   fedora     289.4 KiB
 perl-libnetcfg                       noarch 4:5.42.3-524.fc43               updates     16.9 KiB
 perl-libs                            x86_64 4:5.42.3-524.fc43               updates     11.5 MiB
 perl-local-lib                       noarch 2.000029-10.fc43                fedora     117.6 KiB
 perl-locale                          noarch 1.13-524.fc43                   updates      6.1 KiB
 perl-macros                          noarch 4:5.42.3-524.fc43               updates      5.5 KiB
 perl-meta-notation                   noarch 5.42.3-524.fc43                 updates      2.0 KiB
 perl-mro                             x86_64 1.29-524.fc43                   updates     41.4 KiB
 perl-open                            noarch 1.13-524.fc43                   updates     11.3 KiB
 perl-overload                        noarch 1.40-524.fc43                   updates     71.6 KiB
 perl-overloading                     noarch 0.02-524.fc43                   updates      4.9 KiB
 perl-parent                          noarch 1:0.244-520.fc43                fedora      10.3 KiB
 perl-perlfaq                         noarch 5.20250619-520.fc43             fedora     733.6 KiB
 perl-ph                              x86_64 5.42.3-524.fc43                 updates    277.6 KiB
 perl-podlators                       noarch 1:6.0.2-520.fc43                fedora     317.5 KiB
 perl-sigtrap                         noarch 1.10-524.fc43                   updates     11.1 KiB
 perl-sort                            noarch 2.06-524.fc43                   updates      4.8 KiB
 perl-subs                            noarch 1.04-524.fc43                   updates      2.1 KiB
 perl-threads                         x86_64 1:2.43-520.fc43                 fedora     115.1 KiB
 perl-threads-shared                  x86_64 1.70-520.fc43                   fedora      83.6 KiB
 perl-utils                           noarch 5.42.3-524.fc43                 updates     97.0 KiB
 perl-vars                            noarch 1.05-524.fc43                   updates      3.9 KiB
 perl-version                         x86_64 9:0.99.33-521.fc43              fedora     128.7 KiB
 perl-vmsish                          noarch 1.04-524.fc43                   updates      6.6 KiB
 pixman                               x86_64 0.46.2-2.fc43                   fedora     710.3 KiB
 publicsuffix-list                    noarch 20260116-1.fc43                 updates    342.2 KiB
 python-pip-wheel                     noarch 25.1.1-19.fc43                  updates      1.2 MiB
 python3                              x86_64 3.14.7-1.fc43                   updates     28.7 KiB
 python3-libs                         x86_64 3.14.7-1.fc43                   updates     43.4 MiB
 python3-pyparsing                    noarch 3.1.2-14.fc43                   fedora       1.0 MiB
 rav1e-libs                           x86_64 0.8.1-2.fc43                    updates      3.1 MiB
 rhash                                x86_64 1.4.5-3.fc43                    fedora     351.1 KiB
 shared-mime-info                     x86_64 2.4-2.fc43                      fedora       5.2 MiB
 snappy                               x86_64 1.2.2-2.fc43                    fedora      71.8 KiB
 svt-av1-libs                         x86_64 3.1.2-1.fc43                    fedora       5.6 MiB
 systemtap-sdt-devel                  x86_64 5.6-1.fc43                      updates    191.8 KiB
 systemtap-sdt-dtrace                 x86_64 5.6-1.fc43                      updates    188.4 KiB
 tzdata                               noarch 2026e-1.fc43                    updates      1.6 MiB
 urw-base35-bookman-fonts             noarch 20200910-26.fc43                fedora       1.4 MiB
 urw-base35-c059-fonts                noarch 20200910-26.fc43                fedora       1.4 MiB
 urw-base35-d050000l-fonts            noarch 20200910-26.fc43                fedora      84.3 KiB
 urw-base35-fonts                     noarch 20200910-26.fc43                fedora       5.3 KiB
 urw-base35-fonts-common              noarch 20200910-26.fc43                fedora      37.4 KiB
 urw-base35-gothic-fonts              noarch 20200910-26.fc43                fedora       1.2 MiB
 urw-base35-nimbus-mono-ps-fonts      noarch 20200910-26.fc43                fedora       1.0 MiB
 urw-base35-nimbus-roman-fonts        noarch 20200910-26.fc43                fedora       1.4 MiB
 urw-base35-nimbus-sans-fonts         noarch 20200910-26.fc43                fedora       2.4 MiB
 urw-base35-p052-fonts                noarch 20200910-26.fc43                fedora       1.5 MiB
 urw-base35-standard-symbols-ps-fonts noarch 20200910-26.fc43                fedora      64.9 KiB
 urw-base35-z003-fonts                noarch 20200910-26.fc43                fedora     390.8 KiB
 vim-filesystem                       noarch 2:9.2.1119-1.fc43               updates     40.0   B
 xml-common                           noarch 0.6.3-67.fc43                   fedora      78.4 KiB

Transaction Summary:
 Installing:       395 packages

Total size of inbound packages is 213 MiB. Need to download 213 MiB.
After this operation, 686 MiB extra will be used (install 686 MiB, remove 0 B).
[  1/395] automake-0:1.18.1-2.fc43.noar 100% |  33.6 MiB/s | 723.5 KiB |  00m00s
[  2/395] bicpl-devel-0:2.0.0-1.2026010 100% |   1.8 MiB/s |  38.0 KiB |  00m00s
[  3/395] autoconf-0:2.72-7.fc43.noarch 100% |  36.9 MiB/s | 830.6 KiB |  00m00s
[  4/395] perl-MNI-0:0.08-1.20110321git 100% |  39.9 MiB/s | 163.3 KiB |  00m00s
[  5/395] perl-Getopt-Tabular-0:0.3-32. 100% |   4.1 MiB/s |  46.0 KiB |  00m00s
[  6/395] make-1:4.4.1-11.fc43.x86_64   100% |  17.9 MiB/s | 585.2 KiB |  00m00s
[  7/395] libminc-devel-0:2.4.03-27.fc4 100% |   9.6 MiB/s |  78.5 KiB |  00m00s
[  8/395] libtool-0:2.5.4-8.fc43.x86_64 100% |  86.7 MiB/s | 621.4 KiB |  00m00s
[  9/395] netcdf-devel-0:4.9.2-15.fc43. 100% |  16.2 MiB/s |  99.6 KiB |  00m00s
[ 10/395] perl-interpreter-4:5.42.3-524 100% |   8.7 MiB/s |  71.5 KiB |  00m00s
[ 11/395] zlib-ng-compat-devel-0:2.3.3- 100% |   7.4 MiB/s |  37.8 KiB |  00m00s
[ 12/395] emacs-filesystem-1:30.0-5.fc4 100% |   1.8 MiB/s |   7.5 KiB |  00m00s
[ 13/395] perl-Carp-0:1.54-520.fc43.noa 100% |   4.0 MiB/s |  28.7 KiB |  00m00s
[ 14/395] gcc-c++-0:15.3.1-1.fc43.x86_6 100% | 177.0 MiB/s |  15.4 MiB |  00m00s
[ 15/395] perl-Exporter-0:5.79-520.fc43 100% |   1.7 MiB/s |  30.9 KiB |  00m00s
[ 16/395] perl-File-Temp-1:0.231.100-52 100% |   3.8 MiB/s |  59.0 KiB |  00m00s
[ 17/395] perl-Getopt-Long-1:2.58-520.f 100% |   4.4 MiB/s |  63.6 KiB |  00m00s
[ 18/395] perl-Text-ParseWords-0:3.31-5 100% |   2.7 MiB/s |  16.3 KiB |  00m00s
[ 19/395] perl-PathTools-0:3.94-520.fc4 100% |  10.6 MiB/s |  87.2 KiB |  00m00s
[ 20/395] perl-constant-0:1.33-521.fc43 100% |   2.8 MiB/s |  22.8 KiB |  00m00s
[ 21/395] perl-File-Path-0:2.18-520.fc4 100% |   4.3 MiB/s |  35.1 KiB |  00m00s
[ 22/395] perl-threads-1:2.43-520.fc43. 100% |   6.3 MiB/s |  57.9 KiB |  00m00s
[ 23/395] perl-Thread-Queue-0:3.14-520. 100% |   1.7 MiB/s |  21.3 KiB |  00m00s
[ 24/395] minc-tools-0:2.3.2-8.20260106 100% |  74.6 MiB/s | 382.1 KiB |  00m00s
[ 25/395] libmpc-0:1.3.1-8.fc43.x86_64  100% |  11.5 MiB/s |  70.4 KiB |  00m00s
[ 26/395] gcc-0:15.3.1-1.fc43.x86_64    100% | 215.8 MiB/s |  39.9 MiB |  00m00s
[ 27/395] hdf5-devel-0:1.14.6-6.fc43.x8 100% | 104.4 MiB/s |   1.5 MiB |  00m00s
[ 28/395] libminc-0:2.4.03-27.fc43.x86_ 100% |  38.8 MiB/s | 278.0 KiB |  00m00s
[ 29/395] nifticlib-devel-0:3.0.1-4.fc4 100% |  14.0 MiB/s |  57.5 KiB |  00m00s
[ 30/395] netcdf-0:4.9.2-15.fc43.x86_64 100% |  89.0 MiB/s | 820.6 KiB |  00m00s
[ 31/395] perl-libs-4:5.42.3-524.fc43.x 100% | 121.7 MiB/s |   2.6 MiB |  00m00s
[ 32/395] cpp-0:15.3.1-1.fc43.x86_64    100% | 121.0 MiB/s |  13.1 MiB |  00m00s
[ 33/395] perl-Scalar-List-Utils-5:1.70 100% |   5.2 MiB/s |  75.0 KiB |  00m00s
[ 34/395] perl-parent-1:0.244-520.fc43. 100% |   3.6 MiB/s |  14.8 KiB |  00m00s
[ 35/395] perl-Pod-Usage-4:2.05-520.fc4 100% |   7.9 MiB/s |  40.5 KiB |  00m00s
[ 36/395] perl-threads-shared-0:1.70-52 100% |   8.7 MiB/s |  44.4 KiB |  00m00s
[ 37/395] libaec-devel-0:1.1.4-3.fc43.x 100% |   3.7 MiB/s |  15.2 KiB |  00m00s
[ 38/395] hdf5-0:1.14.6-6.fc43.x86_64   100% | 124.6 MiB/s |   2.0 MiB |  00m00s
[ 39/395] nifticlib-0:3.0.1-4.fc43.x86_ 100% |  23.9 MiB/s | 244.5 KiB |  00m00s
[ 40/395] blosc-0:1.21.6-7.fc43.x86_64  100% |  18.9 MiB/s |  58.1 KiB |  00m00s
[ 41/395] libaec-0:1.1.4-3.fc43.x86_64  100% |  12.2 MiB/s |  37.6 KiB |  00m00s
[ 42/395] libzip-0:1.11.4-2.fc43.x86_64 100% |  17.1 MiB/s |  70.0 KiB |  00m00s
[ 43/395] perl-Pod-Perldoc-0:3.28.01-52 100% |  20.6 MiB/s |  84.3 KiB |  00m00s
[ 44/395] perl-podlators-1:6.0.2-520.fc 100% |  25.1 MiB/s | 128.3 KiB |  00m00s
[ 45/395] snappy-0:1.2.2-2.fc43.x86_64  100% |   4.3 MiB/s |  39.6 KiB |  00m00s
[ 46/395] perl-4:5.42.3-524.fc43.x86_64 100% |   3.1 MiB/s |  12.8 KiB |  00m00s
[ 47/395] perl-Pod-Simple-1:3.47-3.fc43 100% |  30.7 MiB/s | 219.9 KiB |  00m00s
[ 48/395] perl-Term-ANSIColor-0:5.01-52 100% |   9.3 MiB/s |  47.6 KiB |  00m00s
[ 49/395] perl-Term-Cap-0:1.18-520.fc43 100% |   5.4 MiB/s |  21.9 KiB |  00m00s
[ 50/395] perl-CPAN-0:2.38-521.fc43.noa 100% |  69.3 MiB/s | 567.4 KiB |  00m00s
[ 51/395] bicpl-0:2.0.0-1.20260106git8b 100% |   1.9 MiB/s | 406.3 KiB |  00m00s
[ 52/395] perl-CPAN-Meta-0:2.150010-520 100% |  20.7 MiB/s | 190.8 KiB |  00m00s
[ 53/395] perl-CPAN-Meta-Requirements-0 100% |   4.8 MiB/s |  34.5 KiB |  00m00s
[ 54/395] perl-CPAN-Meta-YAML-0:0.020-5 100% |   4.3 MiB/s |  26.7 KiB |  00m00s
[ 55/395] perl-DB_File-0:1.859-516.fc43 100% |  13.2 MiB/s |  80.8 KiB |  00m00s
[ 56/395] perl-Devel-PPPort-0:3.73-521. 100% |  35.8 MiB/s | 219.9 KiB |  00m00s
[ 57/395] perl-Digest-0:1.20-520.fc43.n 100% |   6.1 MiB/s |  24.8 KiB |  00m00s
[ 58/395] perl-Digest-MD5-0:2.59-520.fc 100% |   8.7 MiB/s |  35.8 KiB |  00m00s
[ 59/395] perl-Digest-SHA-1:6.04-521.fc 100% |  15.1 MiB/s |  61.8 KiB |  00m00s
[ 60/395] perl-Env-0:1.06-520.fc43.noar 100% |   3.8 MiB/s |  19.4 KiB |  00m00s
[ 61/395] perl-ExtUtils-CBuilder-1:0.28 100% |  12.4 MiB/s |  50.6 KiB |  00m00s
[ 62/395] perl-ExtUtils-Command-2:7.76- 100% |   2.7 MiB/s |  14.0 KiB |  00m00s
[ 63/395] gcc-gfortran-0:15.3.1-1.fc43. 100% | 147.6 MiB/s |  14.6 MiB |  00m00s
[ 64/395] perl-ExtUtils-Install-0:2.22- 100% |   2.5 MiB/s |  43.4 KiB |  00m00s
[ 65/395] perl-ExtUtils-MM-Utils-2:7.76 100% | 768.2 KiB/s |  11.5 KiB |  00m00s
[ 66/395] perl-ExtUtils-Manifest-1:1.75 100% |   4.7 MiB/s |  34.0 KiB |  00m00s
[ 67/395] perl-ExtUtils-MakeMaker-2:7.7 100% |  28.8 MiB/s | 294.6 KiB |  00m00s
[ 68/395] perl-ExtUtils-ParseXS-1:3.58- 100% |  21.6 MiB/s | 220.7 KiB |  00m00s
[ 69/395] perl-File-Fetch-0:1.08-3.fc43 100% |   6.0 MiB/s |  30.7 KiB |  00m00s
[ 70/395] perl-Filter-Simple-0:0.96-520 100% |   8.8 MiB/s |  26.9 KiB |  00m00s
[ 71/395] perl-Filter-2:1.64-521.fc43.x 100% |  14.0 MiB/s |  85.9 KiB |  00m00s
[ 72/395] perl-IO-Socket-IP-0:0.43-521. 100% |  13.7 MiB/s |  42.1 KiB |  00m00s
[ 73/395] perl-IO-Zlib-1:1.15-520.fc43. 100% |   6.3 MiB/s |  19.5 KiB |  00m00s
[ 74/395] perl-IPC-Cmd-2:1.04-521.fc43. 100% |  12.9 MiB/s |  39.6 KiB |  00m00s
[ 75/395] perl-IPC-SysV-0:2.09-521.fc43 100% |  13.2 MiB/s |  40.6 KiB |  00m00s
[ 76/395] perl-Locale-Maketext-0:1.33-5 100% |  18.3 MiB/s |  93.5 KiB |  00m00s
[ 77/395] perl-MIME-Base64-0:3.16-520.f 100% |   9.7 MiB/s |  29.7 KiB |  00m00s
[ 78/395] perl-Math-BigInt-1:2.0050.03- 100% |  45.8 MiB/s | 234.5 KiB |  00m00s
[ 79/395] perl-Math-BigInt-FastCalc-0:0 100% |   6.9 MiB/s |  28.2 KiB |  00m00s
[ 80/395] perl-Module-Load-1:0.36-520.f 100% |   4.2 MiB/s |  17.2 KiB |  00m00s
[ 81/395] perl-Module-Load-Conditional- 100% |   7.1 MiB/s |  21.9 KiB |  00m00s
[ 82/395] perl-Module-Metadata-0:1.0000 100% |  11.4 MiB/s |  35.2 KiB |  00m00s
[ 83/395] perl-Net-Ping-0:2.76-520.fc43 100% |  16.1 MiB/s |  49.4 KiB |  00m00s
[ 84/395] perl-Params-Check-1:0.38-520. 100% |   7.0 MiB/s |  21.6 KiB |  00m00s
[ 85/395] perl-Perl-OSType-0:1.010-521. 100% |   7.4 MiB/s |  22.7 KiB |  00m00s
[ 86/395] perl-PerlIO-via-QuotedPrint-0 100% |   7.0 MiB/s |  21.6 KiB |  00m00s
[ 87/395] perl-Pod-Checker-4:1.77-520.f 100% |  10.3 MiB/s |  31.6 KiB |  00m00s
[ 88/395] perl-Pod-Escapes-1:1.07-520.f 100% |   9.7 MiB/s |  19.8 KiB |  00m00s
[ 89/395] perl-Sys-Syslog-0:0.36-521.fc 100% |  15.1 MiB/s |  46.3 KiB |  00m00s
[ 90/395] perl-Storable-1:3.37-521.fc43 100% |  24.1 MiB/s |  98.5 KiB |  00m00s
[ 91/395] perl-Test-Harness-1:3.52-4.fc 100% |  45.2 MiB/s | 277.7 KiB |  00m00s
[ 92/395] perl-Text-Balanced-0:2.07-1.f 100% |   7.9 MiB/s |  48.7 KiB |  00m00s
[ 93/395] perl-Test-Simple-3:1.302214-4 100% |  76.6 MiB/s | 863.4 KiB |  00m00s
[ 94/395] perl-Tie-RefHash-0:1.41-520.f 100% |   3.8 MiB/s |  23.5 KiB |  00m00s
[ 95/395] perl-Text-Tabs+Wrap-0:2024.00 100% |   2.6 MiB/s |  21.6 KiB |  00m00s
[ 96/395] perl-Time-HiRes-4:1.9778-520. 100% |  13.9 MiB/s |  57.1 KiB |  00m00s
[ 97/395] perl-Time-Local-2:1.350-520.f 100% |  11.2 MiB/s |  34.4 KiB |  00m00s
[ 98/395] perl-Unicode-Collate-0:1.31-5 100% | 105.0 MiB/s | 645.1 KiB |  00m00s
[ 99/395] perl-Unicode-Normalize-0:1.32 100% |  14.4 MiB/s |  74.0 KiB |  00m00s
[100/395] perl-autodie-0:2.37-521.fc43. 100% |  15.7 MiB/s |  96.7 KiB |  00m00s
[101/395] perl-bignum-0:0.67-521.fc43.n 100% |  15.9 MiB/s |  48.9 KiB |  00m00s
[102/395] perl-encoding-4:3.00-520.fc43 100% |  15.3 MiB/s |  62.9 KiB |  00m00s
[103/395] perl-experimental-0:0.036-2.f 100% |  13.3 MiB/s |  27.3 KiB |  00m00s
[104/395] perl-libnet-0:3.15-521.fc43.n 100% |  31.3 MiB/s | 128.3 KiB |  00m00s
[105/395] perl-version-9:0.99.33-521.fc 100% |  20.4 MiB/s |  62.8 KiB |  00m00s
[106/395] perl-perlfaq-0:5.20250619-520 100% |  73.9 MiB/s | 378.6 KiB |  00m00s
[107/395] perl-ph-0:5.42.3-524.fc43.x86 100% |  16.3 MiB/s |  50.2 KiB |  00m00s
[108/395] perl-Errno-0:1.38-524.fc43.x8 100% |   4.6 MiB/s |  14.1 KiB |  00m00s
[109/395] perl-devel-4:5.42.3-524.fc43. 100% |  46.2 MiB/s | 662.1 KiB |  00m00s
[110/395] ncurses-0:6.5-7.20250614.fc43 100% |  46.2 MiB/s | 426.2 KiB |  00m00s
[111/395] perl-Archive-Zip-0:1.68-17.fc 100% |  12.1 MiB/s | 111.2 KiB |  00m00s
[112/395] perl-Devel-Size-0:0.85-3.fc43 100% |  10.0 MiB/s |  30.6 KiB |  00m00s
[113/395] perl-Compress-Bzip2-0:2.28-24 100% |  16.3 MiB/s |  66.6 KiB |  00m00s
[114/395] perl-File-HomeDir-0:1.006-15. 100% |  19.3 MiB/s |  59.2 KiB |  00m00s
[115/395] perl-Text-Glob-0:0.11-26.fc43 100% |   3.2 MiB/s |  13.2 KiB |  00m00s
[116/395] perl-Module-Build-2:0.42.34-9 100% |  40.9 MiB/s | 251.1 KiB |  00m00s
[117/395] perl-Module-Signature-0:0.93- 100% |  14.3 MiB/s |  87.6 KiB |  00m00s
[118/395] perl-IPC-System-Simple-0:1.30 100% |  12.6 MiB/s |  38.6 KiB |  00m00s
[119/395] perl-local-lib-0:2.000029-10. 100% |  12.9 MiB/s |  66.1 KiB |  00m00s
[120/395] libdb-0:5.3.28-66.fc43.x86_64 100% |  76.0 MiB/s | 778.2 KiB |  00m00s
[121/395] perl-utils-0:5.42.3-524.fc43. 100% |   8.4 MiB/s |  51.6 KiB |  00m00s
[122/395] perl-diagnostics-0:1.40-524.f 100% |  26.8 MiB/s | 219.8 KiB |  00m00s
[123/395] perl-Pod-Functions-0:1.14-524 100% |   4.5 MiB/s |  13.8 KiB |  00m00s
[124/395] perl-File-Which-0:1.27-14.fc4 100% |   7.0 MiB/s |  21.4 KiB |  00m00s
[125/395] perl-inc-latest-2:0.500-31.fc 100% |   5.7 MiB/s |  23.1 KiB |  00m00s
[126/395] perl-Text-Diff-0:1.45-24.fc43 100% |   9.7 MiB/s |  39.9 KiB |  00m00s
[127/395] perl-Software-License-0:0.104 100% |  24.4 MiB/s | 150.0 KiB |  00m00s
[128/395] perl-Data-Section-0:0.200008- 100% |   8.1 MiB/s |  24.9 KiB |  00m00s
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[369/395] publicsuffix-list-0:20260116- 100% |  14.9 MiB/s |  91.7 KiB |  00m00s
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[383/395] libheif-0:1.23.5-3.fc43.x86_6 100% | 161.4 MiB/s | 826.4 KiB |  00m00s
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[385/395] libseccomp-0:2.6.1-2.fc43.x86 100% |  18.3 MiB/s |  75.1 KiB |  00m00s
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[395/395] cmake-rpm-macros-0:3.31.11-1. 100% |   6.4 MiB/s |  13.1 KiB |  00m00s
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[395/395] Total                         100% | 180.1 MiB/s | 213.0 MiB |  00m01s
Running transaction
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[ 26/397] Installing imath-0:3.1.12-4.f 100% | 186.5 MiB/s | 381.9 KiB |  00m00s
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[ 49/397] Installing abattis-cantarell- 100% | 189.9 MiB/s | 194.4 KiB |  00m00s
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[316/397] Installing perl-Encode-devel- 100% |   9.0 MiB/s | 101.1 KiB |  00m00s
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[318/397] Installing perl-utils-0:5.42. 100% |   8.8 MiB/s |  98.6 KiB |  00m00s
[319/397] Installing perl-diagnostics-0 100% |  38.4 MiB/s | 472.4 KiB |  00m00s
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[324/397] Installing perl-Sys-Syslog-0: 100% |  94.6 MiB/s |  96.9 KiB |  00m00s
[325/397] Installing perl-Unicode-Colla 100% | 419.5 MiB/s |   4.2 MiB |  00m00s
[326/397] Installing perl-perlfaq-0:5.2 100% | 360.3 MiB/s | 737.9 KiB |  00m00s
[327/397] Installing perl-ph-0:5.42.3-5 100% | 276.4 MiB/s | 283.0 KiB |  00m00s
[328/397] Installing perl-Compress-Bzip 100% | 141.9 MiB/s | 145.3 KiB |  00m00s
[329/397] Installing perl-Devel-Size-0: 100% |   0.0   B/s |  43.8 KiB |  00m00s
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[333/397] Installing perl-autodie-0:2.3 100% | 214.0 MiB/s | 219.1 KiB |  00m00s
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[343/397] Installing perl-Sub-Exporter- 100% | 197.2 MiB/s | 201.9 KiB |  00m00s
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[345/397] Installing perl-Software-Lice 100% | 250.6 MiB/s | 513.2 KiB |  00m00s
[346/397] Installing perl-Module-Build- 100% |  49.8 MiB/s | 663.2 KiB |  00m00s
[347/397] Installing perl-Compress-Raw- 100% | 120.4 MiB/s | 123.3 KiB |  00m00s
[348/397] Installing perl-IO-Compress-L 100% | 215.2 MiB/s | 220.4 KiB |  00m00s
[349/397] Installing perl-Archive-Tar-0 100% |  13.0 MiB/s | 160.3 KiB |  00m00s
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[351/397] Installing perl-Config-Extens 100% |   0.0   B/s |   3.2 KiB |  00m00s
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[353/397] Installing perl-Devel-Peek-0: 100% |   0.0   B/s |  44.8 KiB |  00m00s
[354/397] Installing perl-English-0:1.1 100% |   0.0   B/s |   6.7 KiB |  00m00s
[355/397] Installing perl-File-DosGlob- 100% |   0.0   B/s |  22.1 KiB |  00m00s
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[360/397] Installing perl-I18N-Langinfo 100% |   0.0   B/s |  36.0 KiB |  00m00s
[361/397] Installing perl-Module-Loaded 100% |   0.0   B/s |   5.6 KiB |  00m00s
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[381/397] Installing perl-vmsish-0:1.04 100% |   0.0   B/s |   7.0 KiB |  00m00s
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[383/397] Installing perl-4:5.42.3-524. 100% |   0.0   B/s | 124.0   B |  00m00s
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[385/397] Installing blosc-0:1.21.6-7.f 100% | 126.0 MiB/s | 129.0 KiB |  00m00s
[386/397] Installing netcdf-0:4.9.2-15. 100% | 130.4 MiB/s |   2.3 MiB |  00m00s
[387/397] Installing libminc-0:2.4.03-2 100% | 339.9 MiB/s | 696.1 KiB |  00m00s
[388/397] Installing bicpl-0:2.0.0-1.20 100% |  84.0 MiB/s |   1.3 MiB |  00m00s
[389/397] Installing minc-tools-0:2.3.2 100% |  67.1 MiB/s |   1.1 MiB |  00m00s
[390/397] Installing netcdf-devel-0:4.9 100% |  28.6 MiB/s | 380.1 KiB |  00m00s
[391/397] Installing libminc-devel-0:2. 100% | 179.4 MiB/s | 367.4 KiB |  00m00s
[392/397] Installing bicpl-devel-0:2.0. 100% | 198.3 MiB/s | 203.0 KiB |  00m00s
[393/397] Installing perl-MNI-0:0.08-1. 100% | 221.2 MiB/s | 453.1 KiB |  00m00s
[394/397] Installing libtool-0:2.5.4-8. 100% | 171.6 MiB/s |   2.7 MiB |  00m00s
[395/397] Installing perl-Getopt-Tabula 100% |  86.0 MiB/s |  88.1 KiB |  00m00s
[396/397] Installing annobin-plugin-gcc 100% |  75.9 MiB/s |   1.0 MiB |  00m00s
[397/397] Installing gcc-plugin-annobin 100% | 131.8 KiB/s |  58.8 KiB |  00m00s
Warning: skipped OpenPGP checks for 4 packages from repository: copr_base
Complete!
Building target platforms: x86_64
Building for target x86_64
setting SOURCE_DATE_EPOCH=1790208000
Wrote: /builddir/build/SRPMS/conglomerate-1.6.80-1.20120308git166303d.fc43.src.rpm
Updating and loading repositories:
 Copr repository                        100% | 102.1 KiB/s |   1.5 KiB |  00m00s
 fedora                                 100% | 102.6 KiB/s |  25.2 KiB |  00m00s
 updates                                100% | 134.5 KiB/s |  22.6 KiB |  00m00s
Repositories loaded.
Nothing to do.
Package "autoconf-2.72-7.fc43.noarch" is already installed.
Package "automake-1.18.1-2.fc43.noarch" is already installed.
Package "bicpl-devel-2.0.0-1.20260106git8be98a9.fc43.x86_64" is already installed.
Package "gcc-15.3.1-1.fc43.x86_64" is already installed.
Package "gcc-c++-15.3.1-1.fc43.x86_64" is already installed.
Package "libminc-devel-2.4.03-27.fc43.x86_64" is already installed.
Package "libtool-2.5.4-8.fc43.x86_64" is already installed.
Package "make-1:4.4.1-11.fc43.x86_64" is already installed.
Package "netcdf-devel-4.9.2-15.fc43.x86_64" is already installed.
Package "perl-Getopt-Tabular-0.3-32.fc43.noarch" is already installed.
Package "perl-MNI-0.08-1.20110321git075ae53.fc43.noarch" is already installed.
Package "perl-interpreter-4:5.42.3-524.fc43.x86_64" is already installed.
Package "zlib-ng-compat-devel-2.3.3-2.fc43.x86_64" is already installed.

Finish: build setup for conglomerate-1.6.80-1.20120308git166303d.fc43.src.rpm
Start: rpmbuild conglomerate-1.6.80-1.20120308git166303d.fc43.src.rpm
Building target platforms: x86_64
Building for target x86_64
setting SOURCE_DATE_EPOCH=1790208000
Executing(%mkbuilddir): /bin/sh -e /var/tmp/rpm-tmp.fwH7rG
Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.PEfeX3
+ umask 022
+ cd /builddir/build/BUILD/conglomerate-1.6.80-build
+ cd /builddir/build/BUILD/conglomerate-1.6.80-build
+ rm -rf conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b
+ /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/conglomerate-166303d.tar.gz
+ STATUS=0
+ '[' 0 -ne 0 ']'
+ cd conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w .
+ mkdir -p m4
+ tar -xf /builddir/build/SOURCES/mni-acmacros.tar.gz --strip-components=1 -C m4
+ test -f m4/smr_WITH_BUILD_PATH.m4
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.MEaHd4
+ umask 022
+ cd /builddir/build/BUILD/conglomerate-1.6.80-build
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  '
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  '
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules  '
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules  '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes  '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b
+ sed -i 's/^dnl AC_PROG_CXX$/AC_PROG_CXX/' configure.ac
+ grep -q '^AC_PROG_CXX$' configure.ac
+ autoreconf -ifv -I m4
autoreconf: export WARNINGS=
autoreconf: Entering directory '.'
autoreconf: configure.ac: not using Gettext
autoreconf: running: aclocal -I m4 --force -I m4
autoreconf: configure.ac: tracing
autoreconf: running: libtoolize --copy --force
libtoolize: putting auxiliary files in '.'.
libtoolize: copying file './ltmain.sh'
libtoolize: putting macros in 'm4'.
libtoolize: copying file 'm4/libtool.m4'
libtoolize: copying file 'm4/ltoptions.m4'
libtoolize: copying file 'm4/ltsugar.m4'
libtoolize: copying file 'm4/ltversion.m4'
libtoolize: copying file 'm4/lt~obsolete.m4'
libtoolize: Consider adding 'AC_CONFIG_MACRO_DIRS([m4])' to configure.ac,
libtoolize: and rerunning libtoolize and aclocal.
autoreconf: configure.ac: not using Intltool
autoreconf: configure.ac: not using Gtkdoc
autoreconf: configure.ac: not needing autopoint
autoreconf: running: aclocal -I m4 --force -I m4
autoreconf: running: /usr/bin/autoconf --include=m4 --force
configure.ac:19: warning: The macro 'AC_PROG_LIBTOOL' is obsolete.
configure.ac:19: You should run autoupdate.
m4/libtool.m4:100: AC_PROG_LIBTOOL is expanded from...
configure.ac:19: the top level
configure.ac:21: warning: The macro 'AC_TRY_LINK' is obsolete.
configure.ac:21: You should run autoupdate.
./lib/autoconf/general.m4:2918: AC_TRY_LINK is expanded from...
m4/mni_REQUIRE_LIB.m4:7: mni_REQUIRE_LIB is expanded from...
m4/mni_REQUIRE_MNILIBS.m4:1: mni_REQUIRE_MINC is expanded from...
m4/mni_REQUIRE_MNILIBS.m4:21: mni_REQUIRE_VOLUMEIO is expanded from...
m4/mni_REQUIRE_MNILIBS.m4:39: mni_REQUIRE_BICPL is expanded from...
configure.ac:21: the top level
configure.ac:21: warning: The macro 'AC_TRY_LINK' is obsolete.
configure.ac:21: You should run autoupdate.
./lib/autoconf/general.m4:2918: AC_TRY_LINK is expanded from...
m4/mni_REQUIRE_LIB.m4:7: mni_REQUIRE_LIB is expanded from...
m4/mni_REQUIRE_MNILIBS.m4:21: mni_REQUIRE_VOLUMEIO is expanded from...
m4/mni_REQUIRE_MNILIBS.m4:39: mni_REQUIRE_BICPL is expanded from...
configure.ac:21: the top level
configure.ac:21: warning: The macro 'AC_TRY_LINK' is obsolete.
configure.ac:21: You should run autoupdate.
./lib/autoconf/general.m4:2918: AC_TRY_LINK is expanded from...
m4/mni_REQUIRE_LIB.m4:7: mni_REQUIRE_LIB is expanded from...
m4/mni_REQUIRE_MNILIBS.m4:39: mni_REQUIRE_BICPL is expanded from...
configure.ac:21: the top level
configure.ac:24: warning: AC_OUTPUT should be used without arguments.
configure.ac:24: You should run autoupdate.
autoreconf: running: /usr/bin/autoheader --include=m4 --force
autoreconf: running: automake --add-missing --copy --force-missing
configure.ac:14: installing './compile'
configure.ac:19: installing './config.guess'
configure.ac:19: installing './config.sub'
configure.ac:5: installing './install-sh'
configure.ac:5: installing './missing'
Makefile.am: installing './INSTALL'
Makefile.am: installing './depcomp'
autoreconf: Leaving directory '.'
+ sed -i s/volume_io2/minc_io/g configure
+ grep -q minc_io configure
+ cp /builddir/build/SOURCES/mni-volume-io-compat.h compat_minc.h
+ mkdir -p compat/volume_io
+ cat
++ pwd
++ pwd
+ export 'CFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS'
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS'
++ pwd
++ pwd
+ export 'CXXFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++17 -fpermissive -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h'
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++17 -fpermissive -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h'
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS'
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++17 -fpermissive -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h'
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules  '
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules  '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes  '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ '[' '-flto=auto -ffat-lto-objectsx' '!=' x ']'
++ find . -type f -name configure -print
+ for file in $(find . -type f -name configure -print)
+ /usr/bin/sed -r --in-place=.backup 's/^char \(\*f\) \(\) = /__attribute__ ((used)) char (*f) () = /g' ./configure
+ diff -u ./configure.backup ./configure
+ mv ./configure.backup ./configure
+ /usr/bin/sed -r --in-place=.backup 's/^char \(\*f\) \(\);/__attribute__ ((used)) char (*f) ();/g' ./configure
+ diff -u ./configure.backup ./configure
+ mv ./configure.backup ./configure
+ /usr/bin/sed -r --in-place=.backup 's/^char \$2 \(\);/__attribute__ ((used)) char \$2 ();/g' ./configure
+ diff -u ./configure.backup ./configure
+ mv ./configure.backup ./configure
+ /usr/bin/sed --in-place=.backup '1{$!N;$!N};$!N;s/int x = 1;\nint y = 0;\nint z;\nint nan;/volatile int x = 1; volatile int y = 0; volatile int z, nan;/;P;D' ./configure
+ diff -u ./configure.backup ./configure
+ mv ./configure.backup ./configure
+ /usr/bin/sed -r --in-place=.backup '/lt_cv_sys_global_symbol_to_cdecl=/s#(".*"|'\''.*'\'')#"sed -n -e '\''s/^T .* \\(.*\\)$/extern int \\1();/p'\'' -e '\''s/^$symcode* .* \\(.*\\)$/extern char \\1;/p'\''"#' ./configure
+ diff -u ./configure.backup ./configure
--- ./configure.backup	2026-10-08 05:01:03.603041228 +0000
+++ ./configure	2026-10-08 05:01:03.640041148 +0000
@@ -7971,7 +7971,7 @@
 # Transform an extracted symbol line into a proper C declaration.
 # Some systems (esp. on ia64) link data and code symbols differently,
 # so use this general approach.
-lt_cv_sys_global_symbol_to_cdecl="$SED -n"\
+lt_cv_sys_global_symbol_to_cdecl="sed -n -e 's/^T .* \(.*\)$/extern int \1();/p' -e 's/^$symcode* .* \(.*\)$/extern char \1;/p'"\
 $lt_cdecl_hook\
 " -e 's/^T .* \(.*\)$/extern int \1();/p'"\
 " -e 's/^$symcode$symcode* .* \(.*\)$/extern char \1;/p'"
@@ -19578,7 +19578,7 @@
 compiler='`$ECHO "$compiler" | $SED "$delay_single_quote_subst"`'
 GCC='`$ECHO "$GCC" | $SED "$delay_single_quote_subst"`'
 lt_cv_sys_global_symbol_pipe='`$ECHO "$lt_cv_sys_global_symbol_pipe" | $SED "$delay_single_quote_subst"`'
-lt_cv_sys_global_symbol_to_cdecl='`$ECHO "$lt_cv_sys_global_symbol_to_cdecl" | $SED "$delay_single_quote_subst"`'
+lt_cv_sys_global_symbol_to_cdecl="sed -n -e 's/^T .* \(.*\)$/extern int \1();/p' -e 's/^$symcode* .* \(.*\)$/extern char \1;/p'"
 lt_cv_sys_global_symbol_to_import='`$ECHO "$lt_cv_sys_global_symbol_to_import" | $SED "$delay_single_quote_subst"`'
 lt_cv_sys_global_symbol_to_c_name_address='`$ECHO "$lt_cv_sys_global_symbol_to_c_name_address" | $SED "$delay_single_quote_subst"`'
 lt_cv_sys_global_symbol_to_c_name_address_lib_prefix='`$ECHO "$lt_cv_sys_global_symbol_to_c_name_address_lib_prefix" | $SED "$delay_single_quote_subst"`'
+ '[' 1 = 1 ']'
+++ dirname ./configure
++ find . -name config.guess -o -name config.sub
+ for i in $(find $(dirname ./configure) -name config.guess -o -name config.sub)
++ basename ./config.sub
+ '[' -f /usr/lib/rpm/redhat/config.sub ']'
+ /usr/bin/rm -f ./config.sub
++ basename ./config.sub
+ /usr/bin/cp -fv /usr/lib/rpm/redhat/config.sub ./config.sub
'/usr/lib/rpm/redhat/config.sub' -> './config.sub'
+ for i in $(find $(dirname ./configure) -name config.guess -o -name config.sub)
++ basename ./config.guess
+ '[' -f /usr/lib/rpm/redhat/config.guess ']'
+ /usr/bin/rm -f ./config.guess
++ basename ./config.guess
+ /usr/bin/cp -fv /usr/lib/rpm/redhat/config.guess ./config.guess
'/usr/lib/rpm/redhat/config.guess' -> './config.guess'
+ '[' 1 = 1 ']'
+ '[' x '!=' 'x-Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors' ']'
++ find . -name ltmain.sh
+ for i in $(find . -name ltmain.sh)
+ /usr/bin/sed -i.backup -e 's~compiler_flags=$~compiler_flags="-Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors"~' ./ltmain.sh
++ grep -q runstatedir=DIR ./configure
++ echo --runstatedir=/run
+ ./configure --build=x86_64-redhat-linux --host=x86_64-redhat-linux --program-prefix= --disable-dependency-tracking --prefix=/usr --exec-prefix=/usr --bindir=/usr/bin --sbindir=/usr/bin --sysconfdir=/etc --datadir=/usr/share --includedir=/usr/include --libdir=/usr/lib64 --libexecdir=/usr/libexec --localstatedir=/var --runstatedir=/run --sharedstatedir=/var/lib --mandir=/usr/share/man --infodir=/usr/share/info --with-minc2 --with-build-path=/usr 'LIBS=-lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm'
checking for a BSD-compatible install... /usr/bin/install -c
checking whether sleep supports fractional seconds... yes
checking filesystem timestamp resolution... 0.01
checking whether build environment is sane... yes
checking for a race-free mkdir -p... /usr/bin/mkdir -p
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking xargs -n works... yes
checking whether UID '1000' is supported by ustar format... yes
checking whether GID '135' is supported by ustar format... yes
checking how to create a ustar tar archive... gnutar
checking whether ln -s works... yes
checking whether make sets $(MAKE)... (cached) yes
checking for x86_64-redhat-linux-gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether the compiler supports GNU C... yes
checking whether gcc accepts -g... yes
checking for gcc option to enable C11 features... none needed
checking whether gcc understands -c and -o together... yes
checking whether make supports the include directive... yes (GNU style)
checking dependency style of gcc... none
checking whether the compiler supports GNU C++... yes
checking whether g++ accepts -g... yes
checking for g++ option to enable C++11 features... unsupported
checking for g++ option to enable C++98 features... unsupported
checking dependency style of g++... none
checking for stdio.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for strings.h... yes
checking for sys/stat.h... yes
checking for sys/types.h... yes
checking for unistd.h... yes
checking for float.h... yes
checking build system type... x86_64-redhat-linux-gnu
checking host system type... x86_64-redhat-linux-gnu
checking how to print strings... printf
checking for a sed that does not truncate output... /usr/bin/sed
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for fgrep... /usr/bin/grep -F
checking for ld used by gcc... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking the maximum length of command line arguments... 1572864
checking how to convert x86_64-redhat-linux-gnu file names to x86_64-redhat-linux-gnu format... func_convert_file_noop
checking how to convert x86_64-redhat-linux-gnu file names to toolchain format... func_convert_file_noop
checking for /usr/bin/ld option to reload object files... -r
checking for file... file
checking for x86_64-redhat-linux-objdump... no
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for x86_64-redhat-linux-dlltool... no
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for x86_64-redhat-linux-ranlib... no
checking for ranlib... ranlib
checking for x86_64-redhat-linux-ar... no
checking for ar... ar
checking for archiver @FILE support... @
checking for x86_64-redhat-linux-strip... no
checking for strip... strip
checking command to parse /usr/bin/nm -B output from gcc object... ok
checking for sysroot... no
checking for a working dd... /usr/bin/dd
checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1
checking for x86_64-redhat-linux-mt... no
checking for mt... no
checking if : is a manifest tool... no
checking for dlfcn.h... yes
checking for objdir... .libs
checking if gcc supports -fno-rtti -fno-exceptions... yes
checking for gcc option to produce PIC... -fPIC -DPIC
checking if gcc PIC flag -fPIC -DPIC works... yes
checking if gcc static flag -static works... no
checking if gcc supports -c -o file.o... yes
checking if gcc supports -c -o file.o... (cached) yes
checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking how to run the C++ preprocessor... g++ -E
checking for ld used by g++... /usr/bin/ld -m elf_x86_64
checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes
checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes
checking for g++ option to produce PIC... -fPIC -DPIC
checking if g++ PIC flag -fPIC -DPIC works... yes
checking if g++ static flag -static works... no
checking if g++ supports -c -o file.o... yes
checking if g++ supports -c -o file.o... (cached) yes
checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes
checking dynamic linker characteristics... (cached) GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking for library m... yes
checking for library netcdf... yes
checking for library z... yes
checking for library hdf5... yes
checking for library minc2... yes
checking for library minc_io... yes
checking for library bicpl... yes
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating epm-header
config.status: creating nlfit_smr
config.status: creating mritotal_suppress
config.status: creating smooth_mask
config.status: creating compute_icbm_vols
config.status: creating multispectral_stx_registration
config.status: creating sphere_resample_obj
config.status: creating suppress_fat
config.status: creating regional_thickness
config.status: creating remap_to_lobes
config.status: creating config.h
config.status: executing depfiles commands
config.status: executing libtool commands
+ /usr/bin/make -O -j4 V=1 VERBOSE=1
/usr/bin/make  all-am
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o autocrop_volume.o autocrop_volume.c
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o add_labels.o add_labels.c
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o apply_sphere_transform.o apply_sphere_transform.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o minc_labels.o minc_labels.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o average_voxels.o average_voxels.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o box_filter_volume.o box_filter_volume.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o blur_surface.o blur_surface.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
blur_surface.c: In function ‘main’:
blur_surface.c:123:17: warning: ‘smooth_values’ may be used uninitialized [-Wmaybe-uninitialized]
  123 |             if( output_real( file, smooth_values[p] ) != OK ||
      |                 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
blur_surface.c:31:61: note: ‘smooth_values’ was declared here
   31 |     Real             fwhm, distance_ratio, *values, value, *smooth_values;
      |                                                             ^~~~~~~~~~~~~
blur_surface.c:104:30: warning: ‘value’ may be used uninitialized [-Wmaybe-uninitialized]
  104 |             smooth_values[p] = value;
      |             ~~~~~~~~~~~~~~~~~^~~~~~~
blur_surface.c:31:53: note: ‘value’ was declared here
   31 |     Real             fwhm, distance_ratio, *values, value, *smooth_values;
      |                                                     ^~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o chamfer_volume.o chamfer_volume.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o chop_tags.o chop_tags.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o box_filter_volume_nd.o box_filter_volume_nd.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o clamp_volume.o clamp_volume.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o classify_sulcus.o classify_sulcus.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o clean_surface_labels.o clean_surface_labels.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
clean_surface_labels.c: In function ‘main’:
clean_surface_labels.c:59:12: warning: unused variable ‘fp’ [-Wunused-variable]
   59 |   FILE   * fp;
      |            ^~
clean_surface_labels.c: In function ‘get_surface_neighbours’:
clean_surface_labels.c:311:3: warning: multi-line comment [-Wcomment]
  311 |   //          /\   /\
      |   ^
clean_surface_labels.c: In function ‘read_scalar’:
clean_surface_labels.c:369:5: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  369 |     fscanf( fp, "%f", &val );
      |     ^~~~~~~~~~~~~~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o cluster_volume.o cluster_volume.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o clip_tags.o clip_tags.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
clip_tags.c: In function ‘main’:
clip_tags.c:336:28: warning: ‘voxel_volume’ may be used uninitialized [-Wmaybe-uninitialized]
  336 |                     volume += voxel_volume;
      |                     ~~~~~~~^~~~~~~~~~~~~~~
clip_tags.c:52:52: note: ‘voxel_volume’ was declared here
   52 |     Real                 min_dist, max_dist, dist, voxel_volume;
      |                                                    ^~~~~~~~~~~~
clip_tags.c:159:24: warning: ‘left_constant’ may be used uninitialized [-Wmaybe-uninitialized]
  159 |     plane_constants[0] = left_constant;
      |     ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
clip_tags.c:58:26: note: ‘left_constant’ was declared here
   58 |     Real                 left_constant, right_constant;
      |                          ^~~~~~~~~~~~~
clip_tags.c:161:24: warning: ‘right_constant’ may be used uninitialized [-Wmaybe-uninitialized]
  161 |     plane_constants[1] = right_constant;
      |     ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
clip_tags.c:58:41: note: ‘right_constant’ was declared here
   58 |     Real                 left_constant, right_constant;
      |                                         ^~~~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o coalesce_lines.o coalesce_lines.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o compare_left_right.o compare_left_right.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
compare_left_right.c: In function ‘main’:
compare_left_right.c:235:20: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
  235 |         if( i == 0 && j == 0 || t_stat[i][j] < min_t )
      |             ~~~~~~~^~~~~~~~~
compare_left_right.c:237:20: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
  237 |         if( i == 0 && j == 0 || t_stat[i][j] > max_t )
      |             ~~~~~~~^~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o compare_lengths.o compare_lengths.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o compare_left_right_groups.o compare_left_right_groups.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
compare_left_right_groups.c: In function ‘main’:
compare_left_right_groups.c:177:20: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
  177 |         if( i == 0 && j == 0 || t < min_t )
      |             ~~~~~~~^~~~~~~~~
compare_left_right_groups.c:179:25: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
  179 |         else if( i == 0 && j == 0 || t > max_t )
      |                  ~~~~~~~^~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o composite_images.o composite_images.c
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o close_surface.o close_surface.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
close_surface.c: In function ‘label_inside_convex_hull’:
close_surface.c:336:34: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
  336 |             if( x == 0 && y == 0 && z == 0 || voxel[c] < limits[0][c] )
      |                 ~~~~~~~~~~~~~~~~~^~~~~~~~~
close_surface.c:340:34: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
  340 |             if( x == 0 && y == 0 && z == 0 || voxel[c] > limits[1][c] )
      |                 ~~~~~~~~~~~~~~~~~^~~~~~~~~
close_surface.c: In function ‘print_convex_boundaries’:
close_surface.c:881:43: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
  881 |                      n_voxels == prev_max && i > prev_pos) )
      |                      ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o composite_minc_images.o composite_minc_images.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
composite_minc_images.c: In function ‘main’:
composite_minc_images.c:32:41: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
   32 |         !equal_strings( method, "add" ) &&
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
   33 |         !equal_strings( method, "composite" ) )
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o compute_bounding_view.o compute_bounding_view.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o concat_images.o concat_images.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o composite_volumes.o composite_volumes.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
composite_volumes.c: In function ‘main’:
composite_volumes.c:199:12: warning: ‘rgb_volume’ may be used uninitialized [-Wmaybe-uninitialized]
  199 |     (void) output_volume( output_filename, NC_UNSPECIFIED, FALSE,
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  200 |                           0.0, 0.0,
      |                           ~~~~~~~~~
  201 |                           rgb_volume, "Composited\n", NULL );
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
composite_volumes.c:17:32: note: ‘rgb_volume’ was declared here
   17 |     Volume             volume, rgb_volume;
      |                                ^~~~~~~~~~
composite_volumes.c:68:9: warning: ‘coding_type’ may be used uninitialized [-Wmaybe-uninitialized]
   68 |         initialize_colour_coding( &colour_coding, coding_type,
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   69 |                                   under_colour, over_colour, low, high );
      |                                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
composite_volumes.c:32:26: note: ‘coding_type’ was declared here
   32 |     Colour_coding_types  coding_type;
      |                          ^~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o count_thresholded_volume.o count_thresholded_volume.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o compute_resels.o compute_resels.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/volume_io.h:40:
compute_resels.c: In function ‘main’:
/usr/include/libminc/volume_io/basic.h:137:62: warning: ‘n_points’ may be used uninitialized [-Wmaybe-uninitialized]
  137 | #define  for_less( i, start, end )  for( (i) = (start);  (i) < (end);  ++(i) )
      |                                                          ~~~~^~~~~~~
compute_resels.c:18:58: note: ‘n_points’ was declared here
   18 |     int              i, n_objects, n_surfaces[2], group, n_points, s;
      |                                                          ^~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o contour_slice.o contour_slice.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o create_2d_sheet.o create_2d_sheet.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
In function ‘create_path_between_nodes’,
    inlined from ‘create_2d_coordinates’ at create_2d_sheet.c:162:17,
    inlined from ‘main’ at create_2d_sheet.c:34:5:
create_2d_sheet.c:80:20: warning: ‘best_neigh’ may be used uninitialized [-Wmaybe-uninitialized]
   80 |     while( current != start_point );
      |            ~~~~~~~~^~~~~~~~~~~~~~
create_2d_sheet.c: In function ‘main’:
create_2d_sheet.c:51:37: note: ‘best_neigh’ was declared here
   51 |     int     n_path, *path, current, best_neigh, n, neigh;
      |                                     ^~~~~~~~~~
In function ‘create_2d_coordinates’,
    inlined from ‘main’ at create_2d_sheet.c:34:5:
create_2d_sheet.c:198:21: warning: ‘start_point’ may be used uninitialized [-Wmaybe-uninitialized]
  198 |     vertices_in_path[start_point] = TRUE;
      |                     ^
create_2d_sheet.c: In function ‘main’:
create_2d_sheet.c:109:51: note: ‘start_point’ was declared here
  109 |     int                  current_point, n_points, start_point, vertex;
      |                                                   ^~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o create_box.o create_box.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o create_label_map.o create_label_map.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o create_2d_surface.o create_2d_surface.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
create_2d_surface.c: In function ‘create_2d_coordinates’:
create_2d_surface.c:284:32: warning: variable ‘dummy’ set but not used [-Wunused-but-set-variable]
  284 |     Real              x, y, z, dummy;
      |                                ^~~~~
In file included from /usr/include/libminc/volume_io.h:43:
In function ‘create_path_between_poles’,
    inlined from ‘create_2d_coordinates’ at create_2d_surface.c:306:17,
    inlined from ‘main’ at create_2d_surface.c:37:5:
/usr/include/libminc/volume_io/arrays.h:78:34: warning: ‘best_neigh’ may be used uninitialized [-Wmaybe-uninitialized]
   78 |              (array) [(n_elems)] = (elem_to_add);                              \
      |              ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
create_2d_surface.c: In function ‘main’:
create_2d_surface.c:73:37: note: ‘best_neigh’ was declared here
   73 |     int     n_path, *path, current, best_neigh, n, neigh;
      |                                     ^~~~~~~~~~
In function ‘create_2d_coordinates’,
    inlined from ‘main’ at create_2d_surface.c:37:5:
create_2d_surface.c:407:35: warning: ‘best_hor’ may be used uninitialized [-Wmaybe-uninitialized]
  407 |                 horizontal[point] = best_hor;
      |                 ~~~~~~~~~~~~~~~~~~^~~~~~~~~~
create_2d_surface.c: In function ‘main’:
create_2d_surface.c:281:58: note: ‘best_hor’ was declared here
  281 |     float             *distances, neigh_dist, best_dist, best_hor;
      |                                                          ^~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o convex_hull.o convex_hull.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
convex_hull.c: In function ‘get_convex_hull’:
convex_hull.c:617:1: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
  617 | if(dbg) printf( "EDGE ENTRY %d:%d for poly %d\n", poly_vertices[edge],
      | ^~
convex_hull.c:620:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
  620 |         ind = find_limit_plane( n_points, points, point_flags,
      |         ^~~
convex_hull.c: In function ‘get_surface_neighbours’:
convex_hull.c:908:3: warning: multi-line comment [-Wcomment]
  908 |   //          /\   /\
      |   ^
In file included from /usr/include/libminc/volume_io.h:46:
convex_hull.c: In function ‘get_plane_polygon_vertices’:
/usr/include/libminc/volume_io/geom_structs.h:60:53: warning: ‘horizontal’ may be used uninitialized [-Wmaybe-uninitialized]
   60 | #define  Point_coord( point, coord ) ((point).coords[coord])
convex_hull.c:422:40: note: ‘horizontal’ declared here
  422 |     Vector   v01, v02, normal, offset, horizontal, vertical;
      |                                        ^~~~~~~~~~
/usr/include/libminc/volume_io/geom_structs.h:97:56: warning: ‘horizontal’ may be used uninitialized [-Wmaybe-uninitialized]
   97 | #define  Vector_coord( vector, coord ) ((vector).coords[coord])
convex_hull.c:422:40: note: ‘horizontal’ declared here
  422 |     Vector   v01, v02, normal, offset, horizontal, vertical;
      |                                        ^~~~~~~~~~
/usr/include/libminc/volume_io/geom_structs.h:97:56: warning: ‘horizontal’ may be used uninitialized [-Wmaybe-uninitialized]
   97 | #define  Vector_coord( vector, coord ) ((vector).coords[coord])
convex_hull.c:422:40: note: ‘horizontal’ declared here
  422 |     Vector   v01, v02, normal, offset, horizontal, vertical;
      |                                        ^~~~~~~~~~
/usr/include/libminc/volume_io/geometry.h:37:24: warning: ‘vertical.coords[0]’ may be used uninitialized [-Wmaybe-uninitialized]
   37 | #define  Real_cast(x) ((VIO_Real) (x))
      |                       ~^~~~~~~~~~~~~~~
convex_hull.c:422:52: note: ‘vertical.coords[0]’ was declared here
  422 |     Vector   v01, v02, normal, offset, horizontal, vertical;
      |                                                    ^~~~~~~~
/usr/include/libminc/volume_io/geometry.h:37:24: warning: ‘vertical.coords[1]’ may be used uninitialized [-Wmaybe-uninitialized]
   37 | #define  Real_cast(x) ((VIO_Real) (x))
      |                       ~^~~~~~~~~~~~~~~
convex_hull.c:422:52: note: ‘vertical.coords[1]’ was declared here
  422 |     Vector   v01, v02, normal, offset, horizontal, vertical;
      |                                                    ^~~~~~~~
/usr/include/libminc/volume_io/geometry.h:37:24: warning: ‘vertical.coords[2]’ may be used uninitialized [-Wmaybe-uninitialized]
   37 | #define  Real_cast(x) ((VIO_Real) (x))
      |                       ~^~~~~~~~~~~~~~~
convex_hull.c:422:52: note: ‘vertical.coords[2]’ was declared here
  422 |     Vector   v01, v02, normal, offset, horizontal, vertical;
      |                                                    ^~~~~~~~
convex_hull.c: In function ‘find_limit_plane.isra.0’:
/usr/include/libminc/volume_io/geometry.h:37:24: warning: ‘horizontal.coords[0]’ may be used uninitialized [-Wmaybe-uninitialized]
   37 | #define  Real_cast(x) ((VIO_Real) (x))
      |                       ~^~~~~~~~~~~~~~~
convex_hull.c:236:14: note: ‘horizontal.coords[0]’ was declared here
  236 |     Vector   horizontal, vertical, offset;
      |              ^~~~~~~~~~
/usr/include/libminc/volume_io/geometry.h:37:24: warning: ‘horizontal.coords[1]’ may be used uninitialized [-Wmaybe-uninitialized]
   37 | #define  Real_cast(x) ((VIO_Real) (x))
      |                       ~^~~~~~~~~~~~~~~
convex_hull.c:236:14: note: ‘horizontal.coords[1]’ was declared here
  236 |     Vector   horizontal, vertical, offset;
      |              ^~~~~~~~~~
/usr/include/libminc/volume_io/geometry.h:37:24: warning: ‘horizontal.coords[2]’ may be used uninitialized [-Wmaybe-uninitialized]
   37 | #define  Real_cast(x) ((VIO_Real) (x))
      |                       ~^~~~~~~~~~~~~~~
convex_hull.c:236:14: note: ‘horizontal.coords[2]’ was declared here
  236 |     Vector   horizontal, vertical, offset;
      |              ^~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o create_four_volumes.o create_four_volumes.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o get_filenames.o get_filenames.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o create_mahalanobis.o create_mahalanobis.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o create_landmark_full_volume.o create_landmark_full_volume.c
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
create_landmark_full_volume.c: In function ‘is_left_id’:
create_landmark_full_volume.c:31:22: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
   31 |     return( id >= 10 && id <= 19 || id == 30 );
      |             ~~~~~~~~~^~~~~~~~~~~
create_landmark_full_volume.c: In function ‘is_right_id’:
create_landmark_full_volume.c:40:22: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
   40 |     return( id >= 20 && id <= 29 || id == 40 );
      |             ~~~~~~~~~^~~~~~~~~~~
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o create_surface_interpolation_lsq.o create_surface_interpolation_lsq.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o dilate_volume.o dilate_volume.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o create_warping_points.o create_warping_points.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o diff_mahalanobis.o diff_mahalanobis.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o dim_image.o dim_image.c
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o dump_deformation_distances.o dump_deformation_distances.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o dilate_volume_completely.o dilate_volume_completely.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
dilate_volume_completely.c: In function ‘main’:
dilate_volume_completely.c:104:62: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
  104 |                                     min_inside <= test_value &&
      |                                     ~~~~~~~~~~~~~~~~~~~~~~~~~^~
  105 |                                     test_value <= max_inside )
      |                                     ~~~~~~~~~~~~~~~~~~~~~~~~  
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o dump_points_to_tag_file.o dump_points_to_tag_file.c
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
dump_points_to_tag_file.c: In function ‘main’:
dump_points_to_tag_file.c:22:31: warning: format ‘%s’ expects a matching ‘char *’ argument [-Wformat=]
   22 |         print_error( "Usage: %s input1.obj [input2.obj] output.txt\n" );
      |                              ~^
      |                               |
      |                               char *
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o dump_rms.o dump_rms.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o dump_transform.o dump_transform.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o dump_uv.o dump_uv.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
dump_uv.c: In function ‘main’:
dump_uv.c:22:31: warning: format ‘%s’ expects a matching ‘char *’ argument [-Wformat=]
   22 |         print_error( "Usage: %s input.obj output.txt\n" );
      |                              ~^
      |                               |
      |                               char *
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o evaluate.o evaluate.c
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o extract_largest_line.o extract_largest_line.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o fill_sulci.o fill_sulci.c
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o extract_tag_slice.o extract_tag_slice.c
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
extract_tag_slice.c: In function ‘main’:
extract_tag_slice.c:114:30: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
  114 |             if( !min_present && value != 0.0 ||
      |                 ~~~~~~~~~~~~~^~~~~~~~~~~~~~~
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o find_surface_distances.o find_surface_distances.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o find_image_bounding_box.o find_image_bounding_box.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o find_buried_surface.o find_buried_surface.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o search_utils.o search_utils.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
search_utils.c: In function ‘contains_value’:
search_utils.c:114:23: warning: ‘under_found’ may be used uninitialized [-Wmaybe-uninitialized]
  114 |                     if( under_found )
      |                       ^
search_utils.c:88:14: note: ‘under_found’ was declared here
   88 |     BOOLEAN  under_found, over_found;
      |              ^~~~~~~~~~~
search_utils.c:108:23: warning: ‘over_found’ may be used uninitialized [-Wmaybe-uninitialized]
  108 |                     if( over_found )
      |                       ^
search_utils.c:88:27: note: ‘over_found’ was declared here
   88 |     BOOLEAN  under_found, over_found;
      |                           ^~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o find_peaks.o find_peaks.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
find_peaks.c: In function ‘check_for_peak’:
find_peaks.c:753:10: warning: enumeration value ‘NEXTREMES’ not handled in switch [-Wswitch]
  753 |          switch (extreme) {
      |          ^~~~~~
find_peaks.c:760:10: warning: enumeration value ‘NEXTREMES’ not handled in switch [-Wswitch]
  760 |          switch (extreme) {
      |          ^~~~~~
find_peaks.c: At top level:
find_peaks.c:58:13: warning: ‘rcsid’ defined but not used [-Wunused-variable]
   58 | static char rcsid[]="$Header: /private-cvsroot/libraries/conglomerate/find_peaks.c,v 1.1 2004-04-22 13:15:01 bert Exp $";
      |             ^~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o model_objects.o model_objects.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
model_objects.c: In function ‘input_original_positions’:
model_objects.c:281:7: warning: ‘n_points’ may be used uninitialized [-Wmaybe-uninitialized]
  281 |     if( n_points != n_deforming_points )
      |       ^
model_objects.c:244:37: note: ‘n_points’ was declared here
  244 |     int               i, n_objects, n_points;
      |                                     ^~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o deform_line.o deform_line.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
deform_line.c: In function ‘one_iteration_lines’:
deform_line.c:59:50: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
   59 |         lines->end_indices[0] != lines->n_points &&
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
   60 |         lines->end_indices[0] != lines->n_points+1 )
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o find_in_direction.o find_in_direction.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
find_in_direction.c: In function ‘find_boundary_in_direction’:
find_in_direction.c:431:27: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
  431 |                 (isovalue &&
      |                  ~~~~~~~~~^~
  432 |                  check_voxel_for_isovalue( lookup, volume, label_volume,
      |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  433 |                                            degrees_continuity,
      |                                            ~~~~~~~~~~~~~~~~~~~
  434 |                                            voxel_index0,
      |                                            ~~~~~~~~~~~~~
  435 |                                            origin0, direction0,
      |                                            ~~~~~~~~~~~~~~~~~~~~
  436 |                                            FALSE,
      |                                            ~~~~~~
  437 |                                            current_distance0, max_dist,
      |                                            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  438 |                                            boundary_def->min_isovalue,
      |                                            ~~~~~~~~~~~~~~~~~~~~~~~~~~~
  439 |                                            boundary_def->normal_direction,
      |                                            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  440 |                                            found, &found_dist ) ||
      |                                            ~~~~~~~~~~~~~~~~~~~~
find_in_direction.c:513:27: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
  513 |                 (isovalue &&
      |                  ~~~~~~~~~^~
  514 |                  check_voxel_for_isovalue( lookup, volume, label_volume,
      |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  515 |                                            degrees_continuity,
      |                                            ~~~~~~~~~~~~~~~~~~~
  516 |                                            voxel_index1,
      |                                            ~~~~~~~~~~~~~
  517 |                                            origin1, direction1,
      |                                            ~~~~~~~~~~~~~~~~~~~~
  518 |                                            TRUE,
      |                                            ~~~~~
  519 |                                            current_distance1, max_dist,
      |                                            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  520 |                                            boundary_def->min_isovalue,
      |                                            ~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |                                            boundary_def->normal_direction,
      |                                            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |                                            found, &found_dist ) ||
      |                                            ~~~~~~~~~~~~~~~~~~~~
find_in_direction.c: In function ‘check_voxel_for_isovalue’:
find_in_direction.c:727:59: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
  727 |                     if( normal_direction == TOWARDS_LOWER && dot_prod > 0.0 ||
      |                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o intersect_voxel.o intersect_voxel.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o find_tag_outliers.o find_tag_outliers.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o find_vertex.o find_vertex.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/volume_io.h:44:
find_vertex.c: In function ‘main’:
find_vertex.c:50:27: warning: ‘ind’ may be used uninitialized [-Wmaybe-uninitialized]
   50 |             Point_z(points[ind]), best_dist );
      |                           ^
find_vertex.c:12:34: note: ‘ind’ was declared here
   12 |     int            i, n_objects, ind, n_points, best_poly, n_items;
      |                                  ^~~
find_vertex.c:66:9: warning: ‘best_poly’ may be used uninitialized [-Wmaybe-uninitialized]
   66 |         print( "Closest polygon: %d\n", best_poly );
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
find_vertex.c:12:49: note: ‘best_poly’ was declared here
   12 |     int            i, n_objects, ind, n_points, best_poly, n_items;
      |                                                 ^~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o find_volume_centroid.o find_volume_centroid.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o models.o models.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o conjugate_min.o conjugate_min.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o conjugate_grad.o conjugate_grad.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o line_minimization.o line_minimization.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
line_minimization.c: In function ‘minimize_along_line’:
line_minimization.c:142:25: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
  142 |         if( f_next < f1 && t_next < t1 ||
      |             ~~~~~~~~~~~~^~~~~~~~~~~~~~
line_minimization.c:150:30: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
  150 |         else if( f_next < f1 && t_next >= t1 ||
      |                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~
line_minimization.c:158:30: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
  158 |         else if( f_next > f1 && t_next < t1 ||
      |                  ~~~~~~~~~~~~^~~~~~~~~~~~~~
line_minimization.c:164:30: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
  164 |         else if( f_next > f1 && t_next >= t1 ||
      |                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~
line_minimization.c:102:7: warning: ‘t2’ may be used uninitialized [-Wmaybe-uninitialized]
  102 |     if( t2 < t0 )
      |       ^
line_minimization.c:38:30: note: ‘t2’ was declared here
   38 |     Real             t0, t1, t2, f0, f1, f2, t_next, f_next, step, fsize;
      |                              ^~
line_minimization.c:117:39: warning: ‘f0’ may be used uninitialized [-Wmaybe-uninitialized]
  117 |         bottom = 2.0 * (t2*f0-t0*f2-t1*f0+t1*f2-t2*f1+t0*f1);
      |                                     ~~^~~
line_minimization.c:38:34: note: ‘f0’ was declared here
   38 |     Real             t0, t1, t2, f0, f1, f2, t_next, f_next, step, fsize;
      |                                  ^~
line_minimization.c:117:45: warning: ‘f2’ may be used uninitialized [-Wmaybe-uninitialized]
  117 |         bottom = 2.0 * (t2*f0-t0*f2-t1*f0+t1*f2-t2*f1+t0*f1);
      |                                           ~~^~~
line_minimization.c:38:42: note: ‘f2’ was declared here
   38 |     Real             t0, t1, t2, f0, f1, f2, t_next, f_next, step, fsize;
      |                                          ^~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o fit_curve.o fit_curve.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o fit_curve2.o fit_curve2.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
fit_curve2.c: In function ‘fit_curve’:
fit_curve2.c:783:72: warning: variable ‘fit’ set but not used [-Wunused-but-set-variable]
  783 |     Real               *parameters, range_tolerance, domain_tolerance, fit;
      |                                                                        ^~~
fit_curve2.c: In function ‘get_closest_segment’:
fit_curve2.c:606:11: warning: ‘best_seg’ may be used uninitialized [-Wmaybe-uninitialized]
  606 |     return( best_seg );
      |           ^
fit_curve2.c:590:16: note: ‘best_seg’ was declared here
  590 |     int   seg, best_seg;
      |                ^~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o flatten_polygons.o flatten_polygons.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
flatten_polygons.c: In function ‘normalize_size’:
flatten_polygons.c:59:14: warning: variable ‘offset’ set but not used [-Wunused-but-set-variable]
   59 |     Vector   offset, diff;
      |              ^~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o flatten_sheet.o flatten_sheet.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
In function ‘flatten_polygons’,
    inlined from ‘main’ at flatten_sheet.c:101:5:
flatten_sheet.c:286:44: warning: ‘which’ may be used uninitialized [-Wmaybe-uninitialized]
  286 |             fixed_indices[i+1] = neighbours[which][i];
      |                                            ^
flatten_sheet.c: In function ‘main’:
flatten_sheet.c:252:64: note: ‘which’ was declared here
  252 |     int              i, p, point, *n_neighbours, **neighbours, which;
      |                                                                ^~~~~
flatten_sheet.c:259:22: warning: ‘x_dir.coords[0]’ may be used uninitialized [-Wmaybe-uninitialized]
  259 |     Vector           x_dir, y_dir, offset, p12, p13;
      |                      ^~~~~
flatten_sheet.c:259:29: warning: ‘y_dir.coords[0]’ may be used uninitialized [-Wmaybe-uninitialized]
  259 |     Vector           x_dir, y_dir, offset, p12, p13;
      |                             ^~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o fit_3d.o fit_3d.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o flatten_sheet3.o flatten_sheet3.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
flatten_sheet3.c: In function ‘create_coefficients’:
flatten_sheet3.c:463:36: warning: format ‘%g’ expects a matching ‘double’ argument [-Wformat=]
  463 |                 print_error( "Y = %g\n" );
      |                                   ~^
      |                                    |
      |                                    double
In file included from /usr/include/libminc/volume_io/arrays.h:32,
                 from /usr/include/libminc/volume_io.h:43:
In function ‘flatten_polygons’,
    inlined from ‘main’ at flatten_sheet3.c:140:5:
flatten_sheet3.c:609:34: warning: ‘which’ may be used uninitialized [-Wmaybe-uninitialized]
  609 |         ALLOC( flat, n_neighbours[which] );
      |                                  ^
flatten_sheet3.c: In function ‘main’:
flatten_sheet3.c:581:35: note: ‘which’ was declared here
  581 |     int              i, p, point, which, n;
      |                                   ^~~~~
flatten_sheet3.c:588:22: warning: ‘x_dir.coords[0]’ may be used uninitialized [-Wmaybe-uninitialized]
  588 |     Vector           x_dir, y_dir, offset;
      |                      ^~~~~
flatten_sheet3.c:588:29: warning: ‘y_dir.coords[0]’ may be used uninitialized [-Wmaybe-uninitialized]
  588 |     Vector           x_dir, y_dir, offset;
      |                             ^~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o flip_tags.o flip_tags.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o flip_volume.o flip_volume.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o flatten_to_sphere.o flatten_to_sphere.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o f_prob.o f_prob.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o flatten_to_sphere2.o flatten_to_sphere2.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
In function ‘flatten_polygons’,
    inlined from ‘main’ at flatten_to_sphere2.c:78:5:
flatten_to_sphere2.c:788:38: warning: ‘radius’ may be used uninitialized [-Wmaybe-uninitialized]
  788 |         parameters[n_parameters-1] = (dtype) radius;
      |                                      ^~~~~~~~~~~~~~
flatten_to_sphere2.c: In function ‘main’:
flatten_to_sphere2.c:643:27: note: ‘radius’ was declared here
  643 |     Real             len, radius, *weights[3][3], *x_flat, *y_flat, *z_flat;
      |                           ^~~~~~
In function ‘evaluate_fit_along_line’,
    inlined from ‘minimize_along_line’ at flatten_to_sphere2.c:566:5,
    inlined from ‘flatten_polygons’ at flatten_to_sphere2.c:833:9,
    inlined from ‘main’ at flatten_to_sphere2.c:78:5:
flatten_to_sphere2.c:412:53: warning: ‘dr’ may be used uninitialized [-Wmaybe-uninitialized]
  412 |         l2 = dx1 * dx1 + dy1 * dy1 + dz1 * dz1 - dr * dr;
      |                                                  ~~~^~~~
flatten_to_sphere2.c: In function ‘main’:
flatten_to_sphere2.c:367:24: note: ‘dr’ was declared here
  367 |     Real   dx, dy, dz, dr, dist, radius, radius2;
      |                        ^~
In function ‘evaluate_fit_along_line’,
    inlined from ‘minimize_along_line’ at flatten_to_sphere2.c:566:5,
    inlined from ‘flatten_polygons’ at flatten_to_sphere2.c:833:9,
    inlined from ‘main’ at flatten_to_sphere2.c:78:5:
flatten_to_sphere2.c:411:54: warning: ‘radius’ may be used uninitialized [-Wmaybe-uninitialized]
  411 |         l1 = x1 * dx1 + y1 * dy1 + z1 * dz1 - radius * dr;
      |                                               ~~~~~~~^~~~
flatten_to_sphere2.c: In function ‘main’:
flatten_to_sphere2.c:367:34: note: ‘radius’ was declared here
  367 |     Real   dx, dy, dz, dr, dist, radius, radius2;
      |                                  ^~~~~~
In function ‘evaluate_fit_along_line’,
    inlined from ‘minimize_along_line’ at flatten_to_sphere2.c:566:5,
    inlined from ‘flatten_polygons’ at flatten_to_sphere2.c:833:9,
    inlined from ‘main’ at flatten_to_sphere2.c:78:5:
flatten_to_sphere2.c:410:12: warning: ‘radius2’ may be used uninitialized [-Wmaybe-uninitialized]
  410 |         l0 = x1 * x1 + y1 * y1 + z1 * z1 - radius2;
      |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
flatten_to_sphere2.c: In function ‘main’:
flatten_to_sphere2.c:367:42: note: ‘radius2’ was declared here
  367 |     Real   dx, dy, dz, dr, dist, radius, radius2;
      |                                          ^~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o gaussian_blur_peaks.o gaussian_blur_peaks.c
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o get_tic.o get_tic.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
get_tic.c: In function ‘main’:
get_tic.c:56:37: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
   55 |         voxel_flag_string[0] != 'v' && voxel_flag_string[0] != 'w' &&
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   56 |         voxel_flag_string[0] != 'V' && voxel_flag_string[0] != 'W' )
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o interpolate_tags.o interpolate_tags.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o histogram_volume.o histogram_volume.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
histogram_volume.c: In function ‘main’:
histogram_volume.c:227:30: warning: ‘min_pos’ may be used uninitialized [-Wmaybe-uninitialized]
  227 |     pos = min_pos + (max_pos - min_pos) *
      |                     ~~~~~~~~~^~~~~~~~~~
histogram_volume.c:30:48: note: ‘min_pos’ was declared here
   30 |     Real                 x_pos, y_height, pos, min_pos, max_pos;
      |                                                ^~~~~~~
histogram_volume.c:227:30: warning: ‘max_pos’ may be used uninitialized [-Wmaybe-uninitialized]
  227 |     pos = min_pos + (max_pos - min_pos) *
      |                     ~~~~~~~~~^~~~~~~~~~
histogram_volume.c:30:57: note: ‘max_pos’ was declared here
   30 |     Real                 x_pos, y_height, pos, min_pos, max_pos;
      |                                                         ^~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o intensity_statistics.o intensity_statistics.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
intensity_statistics.c: In function ‘main’:
intensity_statistics.c:209:9: warning: ‘label_volume’ may be used uninitialized [-Wmaybe-uninitialized]
  209 |         delete_volume( label_volume );
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
intensity_statistics.c:28:34: note: ‘label_volume’ was declared here
   28 |     Volume               volume, label_volume;
      |                                  ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o group_diff.o group_diff.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/volume_io.h:40:
group_diff.c: In function ‘main’:
/usr/include/libminc/volume_io/basic.h:137:62: warning: ‘n_points’ may be used uninitialized [-Wmaybe-uninitialized]
  137 | #define  for_less( i, start, end )  for( (i) = (start);  (i) < (end);  ++(i) )
      |                                                          ~~~~^~~~~~~
group_diff.c:19:58: note: ‘n_points’ was declared here
   19 |     int              i, n_objects, n_surfaces[2], group, n_points, s, p;
      |                                                          ^~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o lookup_labels.o lookup_labels.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o labels_to_rgb.o labels_to_rgb.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o make_diff_volume.o make_diff_volume.c
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make_diff_volume.c: In function ‘main’:
make_diff_volume.c:64:49: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
   64 |         in_one = (min1 > max1 || min1 <= value1 && value1 <= max1);
      |                                  ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
make_diff_volume.c:65:49: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
   65 |         in_two = (min2 > max2 || min2 <= value2 && value2 <= max2);
      |                                  ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o label_sulci.o label_sulci.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o make_gradient_volume.o make_gradient_volume.c
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make_gradient_volume.c: In function ‘main’:
make_gradient_volume.c:47:27: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
   47 |     if( deriv_number != 1 && deriv_number != 2 || order != 1 && order != 3 )
      |         ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o make_grid_lines.o make_grid_lines.c
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o make_slice.o make_slice.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o make_line_links.o make_line_links.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o make_geodesic_volume.o make_geodesic_volume.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make_geodesic_volume.c: In function ‘label_surface_voxels’:
make_geodesic_volume.c:168:40: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
  168 |                 if( dx == 0 && dy == 0 && dz == 0 ||
      |                     ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
make_geodesic_volume.c:173:40: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
  173 |                 if( dx == 0 && dy == 0 && dz == 0 ||
      |                     ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In function ‘find_nearest_voxel’,
    inlined from ‘main’ at make_geodesic_volume.c:122:5:
make_geodesic_volume.c:247:49: warning: array subscript 3 is above array bounds of ‘int[3]’ [-Warray-bounds=]
  247 |                 limits[face][d] = limits[1-face][d];
      |                                   ~~~~~~~~~~~~~~^~~
make_geodesic_volume.c: In function ‘main’:
make_geodesic_volume.c:213:14: note: while referencing ‘limits’
  213 |     int      limits[2][N_DIMENSIONS];
      |              ^~~~~~
In function ‘find_nearest_voxel’,
    inlined from ‘main’ at make_geodesic_volume.c:122:5:
make_geodesic_volume.c:247:29: warning: array subscript 3 is above array bounds of ‘int[3]’ [-Warray-bounds=]
  247 |                 limits[face][d] = limits[1-face][d];
      |                 ~~~~~~~~~~~~^~~
make_geodesic_volume.c: In function ‘main’:
make_geodesic_volume.c:213:14: note: while referencing ‘limits’
  213 |     int      limits[2][N_DIMENSIONS];
      |              ^~~~~~
In function ‘compute_geodesic_volume’,
    inlined from ‘main’ at make_geodesic_volume.c:124:5:
make_geodesic_volume.c:422:5: warning: ‘MEM[(int *)&origin]’ may be used uninitialized [-Wmaybe-uninitialized]
  422 |     set_volume_real_value( volume, origin[X], origin[Y], origin[Z], 0, 0, 0.0 );
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make_geodesic_volume.c: In function ‘main’:
make_geodesic_volume.c:49:30: note: ‘MEM[(int *)&origin]’ was declared here
   49 |     int                 dim, origin[N_DIMENSIONS];
      |                              ^~~~~~
In function ‘compute_geodesic_volume’,
    inlined from ‘main’ at make_geodesic_volume.c:124:5:
make_geodesic_volume.c:422:5: warning: ‘MEM[(int *)&origin + 4B]’ may be used uninitialized [-Wmaybe-uninitialized]
  422 |     set_volume_real_value( volume, origin[X], origin[Y], origin[Z], 0, 0, 0.0 );
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make_geodesic_volume.c: In function ‘main’:
make_geodesic_volume.c:49:30: note: ‘MEM[(int *)&origin + 4B]’ was declared here
   49 |     int                 dim, origin[N_DIMENSIONS];
      |                              ^~~~~~
In function ‘compute_geodesic_volume’,
    inlined from ‘main’ at make_geodesic_volume.c:124:5:
make_geodesic_volume.c:422:5: warning: ‘MEM[(int *)&origin + 8B]’ may be used uninitialized [-Wmaybe-uninitialized]
  422 |     set_volume_real_value( volume, origin[X], origin[Y], origin[Z], 0, 0, 0.0 );
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make_geodesic_volume.c: In function ‘main’:
make_geodesic_volume.c:49:30: note: ‘MEM[(int *)&origin + 8B]’ was declared here
   49 |     int                 dim, origin[N_DIMENSIONS];
      |                              ^~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o make_sphere_transform.o make_sphere_transform.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o make_surface_bitlist.o make_surface_bitlist.c
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make_surface_bitlist.c: In function ‘label_surface_voxels’:
make_surface_bitlist.c:161:44: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
  161 |                     if( dx == 0 && dy == 0 && dz == 0 ||
      |                         ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
make_surface_bitlist.c:166:44: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
  166 |                     if( dx == 0 && dy == 0 && dz == 0 ||
      |                         ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o map_surface_to_sheet.o map_surface_to_sheet.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o map_sheets.o map_sheets.c
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o map_colours_to_sphere.o map_colours_to_sphere.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
map_colours_to_sphere.c: In function ‘main’:
map_colours_to_sphere.c:282:36: warning: ‘interp[0]’ may be used uninitialized [-Wmaybe-uninitialized]
  282 |     Real     coefs[8], best_value, interp[4], value;
      |                                    ^~~~~~
map_colours_to_sphere.c:282:36: warning: ‘interp[1]’ may be used uninitialized [-Wmaybe-uninitialized]
In function ‘evaluate_volume_by_voting’,
    inlined from ‘map_colours_to_sphere_topology’ at map_colours_to_sphere.c:252:13,
    inlined from ‘main’ at map_colours_to_sphere.c:93:5:
map_colours_to_sphere.c:375:23: warning: ‘interp[2]’ may be used uninitialized [-Wmaybe-uninitialized]
  375 |             values[2] = interp[2];
      |             ~~~~~~~~~~^~~~~~~~~~~
map_colours_to_sphere.c: In function ‘main’:
map_colours_to_sphere.c:282:36: note: ‘interp[2]’ was declared here
  282 |     Real     coefs[8], best_value, interp[4], value;
      |                                    ^~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o mask_values.o mask_values.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o mask_volume.o mask_volume.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o match_tags.o match_tags.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
match_tags.c:21:13: warning: ‘rcsid’ defined but not used [-Wunused-variable]
   21 | static char rcsid[]="$Header: /private-cvsroot/libraries/conglomerate/match_tags.c,v 1.1 2004-04-07 15:53:20 bert Exp $";
      |             ^~~~~
match_tags.c: In function ‘main’:
match_tags.c:165:26: warning: ‘near_tag’ may be used uninitialized [-Wmaybe-uninitialized]
  165 |          this_tag = tags2[near_tag];
      |                          ^
match_tags.c:87:34: note: ‘near_tag’ was declared here
   87 |    int ipoint1, ipoint2, icoord, near_tag;
      |                                  ^~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o marching_cubes.o marching_cubes.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
marching_cubes.c: In function ‘get_point_index’:
marching_cubes.c:447:20: warning: variable ‘point_class’ set but not used [-Wunused-but-set-variable]
  447 |     Point_classes  point_class;
      |                    ^~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o minctotag.o minctotag.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
minctotag.c: In function ‘main’:
minctotag.c:83:37: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
   83 |                 if( min_id > max_id && value != 0.0 ||
      |                     ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o mincmask.o mincmask.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o minc_to_rgb.o minc_to_rgb.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o place_images.o place_images.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o normalize_pet.o normalize_pet.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o plane_polygon_intersect.o plane_polygon_intersect.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o preprocess_segmentation.o preprocess_segmentation.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o print_2d_coords.o print_2d_coords.c
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
print_2d_coords.c: In function ‘main’:
print_2d_coords.c:11:41: warning: variable ‘poly’ set but not used [-Wunused-but-set-variable]
   11 |     int                  n_src_objects, poly;
      |                                         ^~~~
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o print_all_labels.o print_all_labels.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
g++ -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++17 -fpermissive -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -c -o mincdefrag.o mincdefrag.cc
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
mincdefrag.cc: In function ‘int clean_color(int*, short int*, short int, short int, int)’:
mincdefrag.cc:22:13: warning: unused variable ‘changed’ [-Wunused-variable]
   22 |     int     changed, num_color, n_voxels;
      |             ^~~~~~~
mincdefrag.cc:23:13: warning: unused variable ‘old_im1’ [-Wunused-variable]
   23 |     short * old_im1, * old_i, * old_ip1;
      |             ^~~~~~~
mincdefrag.cc:23:24: warning: unused variable ‘old_i’ [-Wunused-variable]
   23 |     short * old_im1, * old_i, * old_ip1;
      |                        ^~~~~
mincdefrag.cc:23:33: warning: unused variable ‘old_ip1’ [-Wunused-variable]
   23 |     short * old_im1, * old_i, * old_ip1;
      |                                 ^~~~~~~
mincdefrag.cc: In function ‘int extract_color(int*, short int, short int, int, VIO_Volume)’:
mincdefrag.cc:159:12: warning: unused variable ‘i’ [-Wunused-variable]
  159 |     int    i, j, k, ii;
      |            ^
mincdefrag.cc:159:15: warning: unused variable ‘j’ [-Wunused-variable]
  159 |     int    i, j, k, ii;
      |               ^
mincdefrag.cc:159:18: warning: unused variable ‘k’ [-Wunused-variable]
  159 |     int    i, j, k, ii;
      |                  ^
mincdefrag.cc:159:21: warning: unused variable ‘ii’ [-Wunused-variable]
  159 |     int    i, j, k, ii;
      |                     ^~
mincdefrag.cc:165:11: warning: unused variable ‘nodes’ [-Wunused-variable]
  165 |     int * nodes = NULL;
      |           ^~~~~
mincdefrag.cc:167:13: warning: unused variable ‘old_im1’ [-Wunused-variable]
  167 |     short * old_im1, * old_i, * old_ip1;
      |             ^~~~~~~
mincdefrag.cc:167:24: warning: unused variable ‘old_i’ [-Wunused-variable]
  167 |     short * old_im1, * old_i, * old_ip1;
      |                        ^~~~~
mincdefrag.cc:167:33: warning: unused variable ‘old_ip1’ [-Wunused-variable]
  167 |     short * old_im1, * old_i, * old_ip1;
      |                                 ^~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o print_axis_angles.o print_axis_angles.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
g++ -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++17 -fpermissive -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -c -o mincskel.o mincskel.cc
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
mincskel.cc: In function ‘int skel(int*, VIO_Volume)’:
mincskel.cc:175:12: warning: unused variable ‘i’ [-Wunused-variable]
  175 |     int    i, j, k, ii;
      |            ^
mincskel.cc:175:15: warning: unused variable ‘j’ [-Wunused-variable]
  175 |     int    i, j, k, ii;
      |               ^
mincskel.cc:175:18: warning: unused variable ‘k’ [-Wunused-variable]
  175 |     int    i, j, k, ii;
      |                  ^
mincskel.cc:175:21: warning: unused variable ‘ii’ [-Wunused-variable]
  175 |     int    i, j, k, ii;
      |                     ^~
mincskel.cc:181:11: warning: unused variable ‘nodes’ [-Wunused-variable]
  181 |     int * nodes = NULL;
      |           ^~~~~
mincskel.cc:183:13: warning: unused variable ‘old_im1’ [-Wunused-variable]
  183 |     short * old_im1, * old_i, * old_ip1;
      |             ^~~~~~~
mincskel.cc:183:24: warning: unused variable ‘old_i’ [-Wunused-variable]
  183 |     short * old_im1, * old_i, * old_ip1;
      |                        ^~~~~
mincskel.cc:183:33: warning: unused variable ‘old_ip1’ [-Wunused-variable]
  183 |     short * old_im1, * old_i, * old_ip1;
      |                                 ^~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o print_all_label_bounding_boxes.o print_all_label_bounding_boxes.c
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o print_volume_value.o print_volume_value.c
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o print_world_value.o print_world_value.c
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o reparameterize_line.o reparameterize_line.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o random_warp.o random_warp.c
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o print_world_values.o print_world_values.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
print_world_values.c: In function ‘main’:
print_world_values.c:120:42: warning: format ‘%[^ 	’ expects argument of type ‘char *’, but argument 3 has type ‘char (*)[255]’ [-Wformat=]
  120 |                 if(fscanf(glimfile, "%[^ \t] %*[^\n] %*1[\n]", &cur_minc) > 0) {
      |                                      ~~~~^~                    ~~~~~~~~~
      |                                          |                     |
      |                                          char *                char (*)[255]
print_world_values.c:52:23: warning: unused variable ‘r’ [-Wunused-variable]
   52 |         int        i, r, keep_looping, n_coords;
      |                       ^
In file included from /usr/include/stdio.h:970,
                 from /usr/include/libminc/volume_io/basic.h:34,
                 from /usr/include/libminc/volume_io.h:40:
In function ‘printf’,
    inlined from ‘main’ at print_world_values.c:137:5:
/usr/include/bits/stdio2.h:118:10: warning: ‘voxx’ may be used uninitialized [-Wmaybe-uninitialized]
  118 |   return __printf_chk (__USE_FORTIFY_LEVEL - 1, __fmt, __va_arg_pack ());
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
print_world_values.c: In function ‘main’:
print_world_values.c:50:20: note: ‘voxx’ was declared here
   50 |         int        voxx, voxy, voxz, sizes[MAX_DIMENSIONS];
      |                    ^~~~
In function ‘printf’,
    inlined from ‘main’ at print_world_values.c:137:5:
/usr/include/bits/stdio2.h:118:10: warning: ‘voxy’ may be used uninitialized [-Wmaybe-uninitialized]
  118 |   return __printf_chk (__USE_FORTIFY_LEVEL - 1, __fmt, __va_arg_pack ());
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
print_world_values.c: In function ‘main’:
print_world_values.c:50:26: note: ‘voxy’ was declared here
   50 |         int        voxx, voxy, voxz, sizes[MAX_DIMENSIONS];
      |                          ^~~~
In function ‘printf’,
    inlined from ‘main’ at print_world_values.c:137:5:
/usr/include/bits/stdio2.h:118:10: warning: ‘voxz’ may be used uninitialized [-Wmaybe-uninitialized]
  118 |   return __printf_chk (__USE_FORTIFY_LEVEL - 1, __fmt, __va_arg_pack ());
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
print_world_values.c: In function ‘main’:
print_world_values.c:50:32: note: ‘voxz’ was declared here
   50 |         int        voxx, voxy, voxz, sizes[MAX_DIMENSIONS];
      |                                ^~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o scale_minc_image.o scale_minc_image.c
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o rgb_to_minc.o rgb_to_minc.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o scan_object_to_volume.o scan_object_to_volume.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o segment_probabilities.o segment_probabilities.c
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o stats_tag_file.o stats_tag_file.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
stats_tag_file.c: In function ‘get_stats_for_one_file’:
stats_tag_file.c:100:66: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
  100 |                  (Real) Point_y(marker->position) >= y_min_range &&
      |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
  101 |                  (Real) Point_y(marker->position) <= y_max_range ) )
      |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o spherical_resample.o spherical_resample.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
spherical_resample.c: In function ‘main’:
spherical_resample.c:134:48: warning: ‘in_values’ may be used uninitialized [-Wmaybe-uninitialized]
  134 |                 value += weights[i] * in_values[surface->indices[
      |                                                ^
spherical_resample.c:16:40: note: ‘in_values’ was declared here
   16 |     Real                 dist, value, *in_values;
      |                                        ^~~~~~~~~
spherical_resample.c:140:17: warning: ‘value’ may be used uninitialized [-Wmaybe-uninitialized]
  140 |             if( output_real( out_file, value ) != OK ||
      |                 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
spherical_resample.c:16:32: note: ‘value’ was declared here
   16 |     Real                 dist, value, *in_values;
      |                                ^~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o scan_lines_to_polygons.o scan_lines_to_polygons.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o subsample_volume.o subsample_volume.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o surface_mask.o surface_mask.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o tag_volume.o tag_volume.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o tagtominc.o tagtominc.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o surface_mask2.o surface_mask2.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
surface_mask2.c: In function ‘binary_object_mask’:
surface_mask2.c:45:42: warning: variable ‘max_real_value’ set but not used [-Wunused-but-set-variable]
   45 |     Real                 min_real_value, max_real_value;
      |                                          ^~~~~~~~~~~~~~
surface_mask2.c:45:26: warning: variable ‘min_real_value’ set but not used [-Wunused-but-set-variable]
   45 |     Real                 min_real_value, max_real_value;
      |                          ^~~~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o trimesh_resample.o trimesh_resample.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o threshold_volume.o threshold_volume.c
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o trimesh_to_polygons.o trimesh_to_polygons.c
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o trimesh_set_points.o trimesh_set_points.c
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o tags_to_spheres.o tags_to_spheres.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o transform_volume.o transform_volume.c
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o transform_tags.o transform_tags.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o transform_objects.o transform_objects.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o volume_object_evaluate.o volume_object_evaluate.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o two_surface_resample.o two_surface_resample.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
two_surface_resample.c: In function ‘main’:
two_surface_resample.c:140:48: warning: ‘in_values’ may be used uninitialized [-Wmaybe-uninitialized]
  140 |                 value += weights[i] * in_values[surface->indices[
      |                                                ^
two_surface_resample.c:17:40: note: ‘in_values’ was declared here
   17 |     Real                 dist, value, *in_values;
      |                                        ^~~~~~~~~
two_surface_resample.c:146:17: warning: ‘value’ may be used uninitialized [-Wmaybe-uninitialized]
  146 |             if( output_real( out_file, value ) != OK ||
      |                 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
two_surface_resample.c:17:32: note: ‘value’ was declared here
   17 |     Real                 dist, value, *in_values;
      |                                ^~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o tri_mesh.o tri_mesh.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1942:9: note: this is the location of the previous definition
 1942 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
tri_mesh.c: In function ‘coalesce_on_node_values’:
tri_mesh.c:970:39: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
  970 |                 if( min_size_sq > 0.0 && size < min_size_sq ||
      |                     ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
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/bin/sh ./libtool  --tag=CC   --mode=link gcc  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS  -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes   -L/usr/lib -o add_labels add_labels.o minc_labels.o  -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o add_labels add_labels.o minc_labels.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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/bin/sh ./libtool  --tag=CC   --mode=link gcc  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS  -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes   -L/usr/lib -o autocrop_volume autocrop_volume.o  -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o autocrop_volume autocrop_volume.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o box_filter_volume box_filter_volume.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o blur_surface blur_surface.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o box_filter_volume_nd box_filter_volume_nd.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o create_landmark_full_volume create_landmark_full_volume.o get_filenames.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o create_warping_points create_warping_points.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o create_surface_interpolation_lsq create_surface_interpolation_lsq.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o dim_image dim_image.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o dilate_volume_completely dilate_volume_completely.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o dump_deformation_distances dump_deformation_distances.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o dump_points_to_tag_file dump_points_to_tag_file.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o dump_uv dump_uv.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o evaluate evaluate.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o extract_tag_slice extract_tag_slice.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o extract_largest_line extract_largest_line.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o fill_sulci fill_sulci.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o fit_curve2 fit_curve2.o conjugate_min.o conjugate_grad.o line_minimization.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o flatten_polygons flatten_polygons.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o make_gradient_volume make_gradient_volume.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o plane_polygon_intersect plane_polygon_intersect.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o preprocess_segmentation preprocess_segmentation.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o print_2d_coords print_2d_coords.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o print_all_labels print_all_labels.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o print_all_label_bounding_boxes print_all_label_bounding_boxes.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o random_warp random_warp.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o scan_object_to_volume scan_object_to_volume.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o segment_probabilities segment_probabilities.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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/bin/sh ./libtool  --tag=CC   --mode=link gcc  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS  -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes   -L/usr/lib -o transform_tags transform_tags.o  -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o transform_tags transform_tags.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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/bin/sh ./libtool  --tag=CC   --mode=link gcc  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS  -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes   -L/usr/lib -o transform_objects transform_objects.o  -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o transform_objects transform_objects.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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/bin/sh ./libtool  --tag=CC   --mode=link gcc  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS  -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes   -L/usr/lib -o volume_object_evaluate volume_object_evaluate.o  -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o volume_object_evaluate volume_object_evaluate.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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/bin/sh ./libtool  --tag=CC   --mode=link gcc  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS  -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes   -L/usr/lib -o two_surface_resample two_surface_resample.o  -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o two_surface_resample two_surface_resample.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.pS7qpz
+ umask 022
+ cd /builddir/build/BUILD/conglomerate-1.6.80-build
+ '[' /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT '!=' / ']'
+ rm -rf /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT
++ dirname /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT
+ mkdir -p /builddir/build/BUILD/conglomerate-1.6.80-build
+ mkdir /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  '
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  '
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules  '
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules  '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes  '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b
+ /usr/bin/make install DESTDIR=/builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT 'INSTALL=/usr/bin/install -p'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
 /usr/bin/mkdir -p '/builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin'
  /bin/sh ./libtool   --mode=install /usr/bin/install -p add_labels apply_sphere_transform autocrop_volume average_voxels blur_surface box_filter_volume box_filter_volume_nd chamfer_volume chop_tags clamp_volume classify_sulcus clean_surface_labels clip_tags close_surface cluster_volume coalesce_lines compare_left_right compare_left_right_groups compare_lengths composite_images composite_minc_images composite_volumes compute_bounding_view compute_resels concat_images contour_slice convex_hull count_thresholded_volume create_2d_sheet create_2d_surface create_box create_four_volumes create_label_map create_landmark_full_volume create_mahalanobis create_surface_interpolation_lsq create_warping_points diff_mahalanobis dilate_volume dilate_volume_completely dim_image dump_deformation_distances dump_points_to_tag_file dump_rms dump_transform dump_uv evaluate extract_tag_slice extract_largest_line fill_sulci find_buried_surface find_image_bounding_box find_peaks find_surface_distances find_tag_outliers find_vertex find_volume_centroid fit_curve fit_curve2 fit_3d flatten_polygons flatten_sheet flatten_sheet3 flatten_to_sphere flatten_to_sphere2 flip_tags flip_volume f_prob gaussian_blur_peaks get_tic group_diff histogram_volume intensity_statistics interpolate_tags label_sulci labels_to_rgb lookup_labels make_diff_volume make_geodesic_volume make_gradient_volume make_grid_lines make_line_links make_slice make_surface_bitlist make_sphere_transform map_colours_to_sphere map_surface_to_sheet map_sheets marching_cubes mask_values mask_volume match_tags mincdefrag mincmask mincskel minctotag minc_to_rgb normalize_pet place_images plane_polygon_intersect preprocess_segmentation print_2d_coords print_all_labels print_all_label_bounding_boxes print_axis_angles print_volume_value print_world_value print_world_values random_warp reparameterize_line rgb_to_minc scale_minc_image scan_lines_to_polygons scan_object_to_volume segment_probabilities spherical_resample stats_tag_file subsample_volume surface_mask surface_mask2 tag_volume tagtominc threshold_volume trimesh_resample trimesh_set_points trimesh_to_polygons tags_to_spheres transform_volume transform_tags transform_objects two_surface_resample volume_object_evaluate '/builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin'
libtool: install: /usr/bin/install -p add_labels /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/add_labels
libtool: install: /usr/bin/install -p apply_sphere_transform /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/apply_sphere_transform
libtool: install: /usr/bin/install -p autocrop_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/autocrop_volume
libtool: install: /usr/bin/install -p average_voxels /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/average_voxels
libtool: install: /usr/bin/install -p blur_surface /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/blur_surface
libtool: install: /usr/bin/install -p box_filter_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/box_filter_volume
libtool: install: /usr/bin/install -p box_filter_volume_nd /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/box_filter_volume_nd
libtool: install: /usr/bin/install -p chamfer_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/chamfer_volume
libtool: install: /usr/bin/install -p chop_tags /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/chop_tags
libtool: install: /usr/bin/install -p clamp_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/clamp_volume
libtool: install: /usr/bin/install -p classify_sulcus /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/classify_sulcus
libtool: install: /usr/bin/install -p clean_surface_labels /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/clean_surface_labels
libtool: install: /usr/bin/install -p clip_tags /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/clip_tags
libtool: install: /usr/bin/install -p close_surface /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/close_surface
libtool: install: /usr/bin/install -p cluster_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/cluster_volume
libtool: install: /usr/bin/install -p coalesce_lines /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/coalesce_lines
libtool: install: /usr/bin/install -p compare_left_right /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/compare_left_right
libtool: install: /usr/bin/install -p compare_left_right_groups /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/compare_left_right_groups
libtool: install: /usr/bin/install -p compare_lengths /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/compare_lengths
libtool: install: /usr/bin/install -p composite_images /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/composite_images
libtool: install: /usr/bin/install -p composite_minc_images /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/composite_minc_images
libtool: install: /usr/bin/install -p composite_volumes /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/composite_volumes
libtool: install: /usr/bin/install -p compute_bounding_view /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/compute_bounding_view
libtool: install: /usr/bin/install -p compute_resels /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/compute_resels
libtool: install: /usr/bin/install -p concat_images /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/concat_images
libtool: install: /usr/bin/install -p contour_slice /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/contour_slice
libtool: install: /usr/bin/install -p convex_hull /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/convex_hull
libtool: install: /usr/bin/install -p count_thresholded_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/count_thresholded_volume
libtool: install: /usr/bin/install -p create_2d_sheet /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_2d_sheet
libtool: install: /usr/bin/install -p create_2d_surface /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_2d_surface
libtool: install: /usr/bin/install -p create_box /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_box
libtool: install: /usr/bin/install -p create_four_volumes /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_four_volumes
libtool: install: /usr/bin/install -p create_label_map /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_label_map
libtool: install: /usr/bin/install -p create_landmark_full_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_landmark_full_volume
libtool: install: /usr/bin/install -p create_mahalanobis /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_mahalanobis
libtool: install: /usr/bin/install -p create_surface_interpolation_lsq /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_surface_interpolation_lsq
libtool: install: /usr/bin/install -p create_warping_points /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_warping_points
libtool: install: /usr/bin/install -p diff_mahalanobis /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/diff_mahalanobis
libtool: install: /usr/bin/install -p dilate_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dilate_volume
libtool: install: /usr/bin/install -p dilate_volume_completely /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dilate_volume_completely
libtool: install: /usr/bin/install -p dim_image /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dim_image
libtool: install: /usr/bin/install -p dump_deformation_distances /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dump_deformation_distances
libtool: install: /usr/bin/install -p dump_points_to_tag_file /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dump_points_to_tag_file
libtool: install: /usr/bin/install -p dump_rms /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dump_rms
libtool: install: /usr/bin/install -p dump_transform /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dump_transform
libtool: install: /usr/bin/install -p dump_uv /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dump_uv
libtool: install: /usr/bin/install -p evaluate /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/evaluate
libtool: install: /usr/bin/install -p extract_tag_slice /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/extract_tag_slice
libtool: install: /usr/bin/install -p extract_largest_line /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/extract_largest_line
libtool: install: /usr/bin/install -p fill_sulci /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/fill_sulci
libtool: install: /usr/bin/install -p find_buried_surface /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_buried_surface
libtool: install: /usr/bin/install -p find_image_bounding_box /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_image_bounding_box
libtool: install: /usr/bin/install -p find_peaks /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_peaks
libtool: install: /usr/bin/install -p find_surface_distances /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_surface_distances
libtool: install: /usr/bin/install -p find_tag_outliers /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_tag_outliers
libtool: install: /usr/bin/install -p find_vertex /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_vertex
libtool: install: /usr/bin/install -p find_volume_centroid /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_volume_centroid
libtool: install: /usr/bin/install -p fit_curve /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/fit_curve
libtool: install: /usr/bin/install -p fit_curve2 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/fit_curve2
libtool: install: /usr/bin/install -p fit_3d /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/fit_3d
libtool: install: /usr/bin/install -p flatten_polygons /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flatten_polygons
libtool: install: /usr/bin/install -p flatten_sheet /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flatten_sheet
libtool: install: /usr/bin/install -p flatten_sheet3 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flatten_sheet3
libtool: install: /usr/bin/install -p flatten_to_sphere /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flatten_to_sphere
libtool: install: /usr/bin/install -p flatten_to_sphere2 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flatten_to_sphere2
libtool: install: /usr/bin/install -p flip_tags /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flip_tags
libtool: install: /usr/bin/install -p flip_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flip_volume
libtool: install: /usr/bin/install -p f_prob /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/f_prob
libtool: install: /usr/bin/install -p gaussian_blur_peaks /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/gaussian_blur_peaks
libtool: install: /usr/bin/install -p get_tic /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/get_tic
libtool: install: /usr/bin/install -p group_diff /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/group_diff
libtool: install: /usr/bin/install -p histogram_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/histogram_volume
libtool: install: /usr/bin/install -p intensity_statistics /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/intensity_statistics
libtool: install: /usr/bin/install -p interpolate_tags /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/interpolate_tags
libtool: install: /usr/bin/install -p label_sulci /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/label_sulci
libtool: install: /usr/bin/install -p labels_to_rgb /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/labels_to_rgb
libtool: install: /usr/bin/install -p lookup_labels /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/lookup_labels
libtool: install: /usr/bin/install -p make_diff_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_diff_volume
libtool: install: /usr/bin/install -p make_geodesic_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_geodesic_volume
libtool: install: /usr/bin/install -p make_gradient_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_gradient_volume
libtool: install: /usr/bin/install -p make_grid_lines /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_grid_lines
libtool: install: /usr/bin/install -p make_line_links /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_line_links
libtool: install: /usr/bin/install -p make_slice /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_slice
libtool: install: /usr/bin/install -p make_surface_bitlist /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_surface_bitlist
libtool: install: /usr/bin/install -p make_sphere_transform /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_sphere_transform
libtool: install: /usr/bin/install -p map_colours_to_sphere /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/map_colours_to_sphere
libtool: install: /usr/bin/install -p map_surface_to_sheet /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/map_surface_to_sheet
libtool: install: /usr/bin/install -p map_sheets /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/map_sheets
libtool: install: /usr/bin/install -p marching_cubes /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/marching_cubes
libtool: install: /usr/bin/install -p mask_values /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/mask_values
libtool: install: /usr/bin/install -p mask_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/mask_volume
libtool: install: /usr/bin/install -p match_tags /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/match_tags
libtool: install: /usr/bin/install -p mincdefrag /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/mincdefrag
libtool: install: /usr/bin/install -p mincmask /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/mincmask
libtool: install: /usr/bin/install -p mincskel /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/mincskel
libtool: install: /usr/bin/install -p minctotag /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/minctotag
libtool: install: /usr/bin/install -p minc_to_rgb /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/minc_to_rgb
libtool: install: /usr/bin/install -p normalize_pet /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/normalize_pet
libtool: install: /usr/bin/install -p place_images /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/place_images
libtool: install: /usr/bin/install -p plane_polygon_intersect /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/plane_polygon_intersect
libtool: install: /usr/bin/install -p preprocess_segmentation /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/preprocess_segmentation
libtool: install: /usr/bin/install -p print_2d_coords /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_2d_coords
libtool: install: /usr/bin/install -p print_all_labels /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_all_labels
libtool: install: /usr/bin/install -p print_all_label_bounding_boxes /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_all_label_bounding_boxes
libtool: install: /usr/bin/install -p print_axis_angles /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_axis_angles
libtool: install: /usr/bin/install -p print_volume_value /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_volume_value
libtool: install: /usr/bin/install -p print_world_value /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_world_value
libtool: install: /usr/bin/install -p print_world_values /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_world_values
libtool: install: /usr/bin/install -p random_warp /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/random_warp
libtool: install: /usr/bin/install -p reparameterize_line /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/reparameterize_line
libtool: install: /usr/bin/install -p rgb_to_minc /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/rgb_to_minc
libtool: install: /usr/bin/install -p scale_minc_image /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/scale_minc_image
libtool: install: /usr/bin/install -p scan_lines_to_polygons /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/scan_lines_to_polygons
libtool: install: /usr/bin/install -p scan_object_to_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/scan_object_to_volume
libtool: install: /usr/bin/install -p segment_probabilities /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/segment_probabilities
libtool: install: /usr/bin/install -p spherical_resample /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/spherical_resample
libtool: install: /usr/bin/install -p stats_tag_file /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/stats_tag_file
libtool: install: /usr/bin/install -p subsample_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/subsample_volume
libtool: install: /usr/bin/install -p surface_mask /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/surface_mask
libtool: install: /usr/bin/install -p surface_mask2 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/surface_mask2
libtool: install: /usr/bin/install -p tag_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/tag_volume
libtool: install: /usr/bin/install -p tagtominc /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/tagtominc
libtool: install: /usr/bin/install -p threshold_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/threshold_volume
libtool: install: /usr/bin/install -p trimesh_resample /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/trimesh_resample
libtool: install: /usr/bin/install -p trimesh_set_points /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/trimesh_set_points
libtool: install: /usr/bin/install -p trimesh_to_polygons /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/trimesh_to_polygons
libtool: install: /usr/bin/install -p tags_to_spheres /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/tags_to_spheres
libtool: install: /usr/bin/install -p transform_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/transform_volume
libtool: install: /usr/bin/install -p transform_tags /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/transform_tags
libtool: install: /usr/bin/install -p transform_objects /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/transform_objects
libtool: install: /usr/bin/install -p two_surface_resample /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/two_surface_resample
libtool: install: /usr/bin/install -p volume_object_evaluate /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/volume_object_evaluate
 /usr/bin/mkdir -p '/builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin'
 /usr/bin/install -p nlfit_smr mritotal_suppress smooth_mask compute_icbm_vols multispectral_stx_registration sphere_resample_obj suppress_fat regional_thickness remap_to_lobes '/builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin'
make[1]: Nothing to be done for 'install-data-am'.
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
+ find /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT -name '*.la' -delete
+ /usr/bin/find-debuginfo -j4 --strict-build-id -m -i --build-id-seed 1.6.80-1.20120308git166303d.fc43 --unique-debug-suffix -1.6.80-1.20120308git166303d.fc43.x86_64 --unique-debug-src-base conglomerate-1.6.80-1.20120308git166303d.fc43.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 --remove-section .gnu.build.attributes -S debugsourcefiles.list /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b
find-debuginfo: starting
Extracting debug info from 132 files
DWARF-compressing 132 files
sepdebugcrcfix: Updated 132 CRC32s, 0 CRC32s did match.
Creating .debug symlinks for symlinks to ELF files
Copying sources found by 'debugedit -l' to /usr/src/debug/conglomerate-1.6.80-1.20120308git166303d.fc43.x86_64
find-debuginfo: done
+ /usr/lib/rpm/check-buildroot
+ /usr/lib/rpm/redhat/brp-ldconfig
+ /usr/lib/rpm/brp-compress
+ /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip
+ /usr/lib/rpm/check-rpaths
+ /usr/lib/rpm/redhat/brp-mangle-shebangs
mangling shebang in /usr/bin/remap_to_lobes from /usr/bin/env perl to #!/usr/bin/perl
mangling shebang in /usr/bin/regional_thickness from /usr/bin/env perl to #!/usr/bin/perl
mangling shebang in /usr/bin/suppress_fat from /usr/bin/env perl to #!/usr/bin/perl
mangling shebang in /usr/bin/sphere_resample_obj from /usr/bin/env perl to #!/usr/bin/perl
mangling shebang in /usr/bin/multispectral_stx_registration from /usr/bin/env perl to #!/usr/bin/perl
mangling shebang in /usr/bin/compute_icbm_vols from /usr/bin/env perl to #!/usr/bin/perl
mangling shebang in /usr/bin/smooth_mask from /usr/bin/env perl to #!/usr/bin/perl
mangling shebang in /usr/bin/mritotal_suppress from /usr/bin/env perl to #!/usr/bin/perl
mangling shebang in /usr/bin/nlfit_smr from /usr/bin/env perl to #!/usr/bin/perl
+ /usr/lib/rpm/brp-remove-la-files
+ /usr/lib/rpm/redhat/brp-python-rpm-in-distinfo
+ env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j4
+ /usr/lib/rpm/redhat/brp-python-hardlink
+ /usr/bin/add-determinism --brp -j4 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT
Scanned 11 directories and 428 files,
               processed 0 inodes,
               0 modified (0 replaced + 0 rewritten),
               0 unsupported format, 0 errors
Reading /builddir/build/BUILD/conglomerate-1.6.80-build/SPECPARTS/rpm-debuginfo.specpart
Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.PraXTU
+ umask 022
+ cd /builddir/build/BUILD/conglomerate-1.6.80-build
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  '
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  '
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules  '
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules  '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes  '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b
++ ls -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin
++ wc -l
+ n=141
141 programs installed
+ test 141 -eq 141
+ echo '141 programs installed'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/add_labels
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/apply_sphere_transform
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/autocrop_volume
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/average_voxels
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/blur_surface
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/box_filter_volume
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/box_filter_volume_nd
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/chamfer_volume
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/chop_tags
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/clamp_volume
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/classify_sulcus
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/clean_surface_labels
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/clip_tags
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/close_surface
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/cluster_volume
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/coalesce_lines
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/compare_left_right
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/compare_left_right_groups
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/compare_lengths
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/composite_images
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/composite_minc_images
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/composite_volumes
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/compute_bounding_view
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/compute_icbm_vols
+ grep -q '^#!.*perl'
+ /usr/bin/perl -c /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/compute_icbm_vols
/builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/compute_icbm_vols syntax OK
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/compute_resels
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/concat_images
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/contour_slice
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/convex_hull
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/count_thresholded_volume
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_2d_sheet
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_2d_surface
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_box
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_four_volumes
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ grep -q '^#!.*perl'
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_label_map
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_landmark_full_volume
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_mahalanobis
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_surface_interpolation_lsq
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_warping_points
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/diff_mahalanobis
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dilate_volume
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dilate_volume_completely
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dim_image
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dump_deformation_distances
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dump_points_to_tag_file
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dump_rms
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dump_transform
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dump_uv
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/evaluate
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/extract_largest_line
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/extract_tag_slice
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/f_prob
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/fill_sulci
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_buried_surface
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_image_bounding_box
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_peaks
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_surface_distances
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_tag_outliers
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_vertex
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_volume_centroid
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/fit_3d
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/fit_curve
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/fit_curve2
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flatten_polygons
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flatten_sheet
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flatten_sheet3
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flatten_to_sphere
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flatten_to_sphere2
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flip_tags
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flip_volume
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/gaussian_blur_peaks
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/get_tic
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/group_diff
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/histogram_volume
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/intensity_statistics
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/interpolate_tags
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/label_sulci
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/labels_to_rgb
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/lookup_labels
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_diff_volume
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_geodesic_volume
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_gradient_volume
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_grid_lines
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_line_links
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_slice
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_sphere_transform
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_surface_bitlist
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/map_colours_to_sphere
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/map_sheets
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/map_surface_to_sheet
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/marching_cubes
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/mask_values
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/mask_volume
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/match_tags
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/minc_to_rgb
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/mincdefrag
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/mincmask
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/mincskel
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/minctotag
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/mritotal_suppress
+ grep -q '^#!.*perl'
+ /usr/bin/perl -c /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/mritotal_suppress
/builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/mritotal_suppress syntax OK
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/multispectral_stx_registration
+ grep -q '^#!.*perl'
+ /usr/bin/perl -c /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/multispectral_stx_registration
/builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/multispectral_stx_registration syntax OK
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/nlfit_smr
+ grep -q '^#!.*perl'
+ /usr/bin/perl -c /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/nlfit_smr
/builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/nlfit_smr syntax OK
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/normalize_pet
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/place_images
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/plane_polygon_intersect
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/preprocess_segmentation
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_2d_coords
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ grep -q '^#!.*perl'
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_all_label_bounding_boxes
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_all_labels
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_axis_angles
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_volume_value
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_world_value
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_world_values
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/random_warp
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/regional_thickness
+ grep -q '^#!.*perl'
+ /usr/bin/perl -c /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/regional_thickness
/builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/regional_thickness syntax OK
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/remap_to_lobes
+ grep -q '^#!.*perl'
+ /usr/bin/perl -c /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/remap_to_lobes
/builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/remap_to_lobes syntax OK
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/reparameterize_line
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/rgb_to_minc
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/scale_minc_image
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/scan_lines_to_polygons
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/scan_object_to_volume
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/segment_probabilities
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/smooth_mask
+ grep -q '^#!.*perl'
+ /usr/bin/perl -c /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/smooth_mask
/builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/smooth_mask syntax OK
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/sphere_resample_obj
+ grep -q '^#!.*perl'
+ /usr/bin/perl -c /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/sphere_resample_obj
/builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/sphere_resample_obj syntax OK
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/spherical_resample
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/stats_tag_file
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/subsample_volume
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/suppress_fat
+ grep -q '^#!.*perl'
+ /usr/bin/perl -c /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/suppress_fat
/builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/suppress_fat syntax OK
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/surface_mask
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ grep -q '^#!.*perl'
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/surface_mask2
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/tag_volume
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/tags_to_spheres
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/tagtominc
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/threshold_volume
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ grep -q '^#!.*perl'
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/transform_objects
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/transform_tags
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/transform_volume
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/trimesh_resample
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/trimesh_set_points
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/trimesh_to_polygons
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/two_surface_resample
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/volume_object_evaluate
+ grep -q '^#!.*perl'
+ RPM_EC=0
++ jobs -p
+ exit 0
Processing files: conglomerate-1.6.80-1.20120308git166303d.fc43.x86_64
Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.aAkKfs
+ umask 022
+ cd /builddir/build/BUILD/conglomerate-1.6.80-build
+ cd conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b
+ DOCDIR=/builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/share/doc/conglomerate
+ export LC_ALL=C.UTF-8
+ LC_ALL=C.UTF-8
+ export DOCDIR
+ /usr/bin/mkdir -p /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/share/doc/conglomerate
+ cp -pr /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/AUTHORS /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/share/doc/conglomerate
+ cp -pr /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/ChangeLog /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/share/doc/conglomerate
+ cp -pr /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/NEWS /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/share/doc/conglomerate
+ cp -pr /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/README /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/share/doc/conglomerate
+ cp -pr /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/TODO /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/share/doc/conglomerate
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.VqJij5
+ umask 022
+ cd /builddir/build/BUILD/conglomerate-1.6.80-build
+ cd conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b
+ LICENSEDIR=/builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/share/licenses/conglomerate
+ export LC_ALL=C.UTF-8
+ LC_ALL=C.UTF-8
+ export LICENSEDIR
+ /usr/bin/mkdir -p /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/share/licenses/conglomerate
+ cp -pr /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/COPYING /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/share/licenses/conglomerate
+ RPM_EC=0
++ jobs -p
+ exit 0
Provides: conglomerate = 1.6.80-1.20120308git166303d.fc43 conglomerate(x86-64) = 1.6.80-1.20120308git166303d.fc43
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: /usr/bin/perl libbicpl.so.1()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_2.4)(64bit) libc.so.6(GLIBC_2.7)(64bit) libc.so.6(GLIBC_ABI_DT_RELR)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.23)(64bit) libm.so.6(GLIBC_2.29)(64bit) libminc2.so.5.2.0()(64bit) libnetcdf.so.19()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) rtld(GNU_HASH)
Processing files: conglomerate-debugsource-1.6.80-1.20120308git166303d.fc43.x86_64
Provides: conglomerate-debugsource = 1.6.80-1.20120308git166303d.fc43 conglomerate-debugsource(x86-64) = 1.6.80-1.20120308git166303d.fc43
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Processing files: conglomerate-debuginfo-1.6.80-1.20120308git166303d.fc43.x86_64
Provides: conglomerate-debuginfo = 1.6.80-1.20120308git166303d.fc43 conglomerate-debuginfo(x86-64) = 1.6.80-1.20120308git166303d.fc43 debuginfo(build-id) = 0043c079dd52186b608eb53d8ea2f80dfdcfe508 debuginfo(build-id) = 011f6dca12c7f0eaceafe575b8919ec5a3407272 debuginfo(build-id) = 043d8806cf0c971117074c0c1fe5d9d7a8b6a081 debuginfo(build-id) = 05364267ff837e114b2fdc046425cc3935f5ac00 debuginfo(build-id) = 055c511b4746a8983d260300be370645925ebef9 debuginfo(build-id) = 06c77e1c8b2604e4245426f4c8611f3ee4a14564 debuginfo(build-id) = 08cd66b0cfa8b6e7c6c0f35e84c549f1e291b937 debuginfo(build-id) = 0a8840bc7e765d570c3689d590af4f0626538f91 debuginfo(build-id) = 0b2b605dca7ac713d48091b6d423b722cd80aec8 debuginfo(build-id) = 0cb6a0910d7820181d4432c975acda562e43ede0 debuginfo(build-id) = 0cfe5c0dd968422e1b6f4d88fb734bfeb4284f86 debuginfo(build-id) = 0dac05555303dfc359c0a851feabf9cf59474715 debuginfo(build-id) = 0e90a745098125f72787862f3a9993bd2a53b20f debuginfo(build-id) = 101a86daa171a38d832be9eda9b55a2b71282991 debuginfo(build-id) = 13118f5a59446de3da1bb639b4260fc3169a9fdd debuginfo(build-id) = 216248da3c1b240c476840fdef1e16772297127e debuginfo(build-id) = 256598881b158fdfea38267e5ee6f9d941f5f505 debuginfo(build-id) = 258fb10005aec708e67b916b2d594563c85af4ca debuginfo(build-id) = 305851b62ab4cfcc9c7baa6b2d220664509f069a debuginfo(build-id) = 3804c170dd8f429508915ad9f75efbf43e235a4a debuginfo(build-id) = 39fb07ad9888f0ecb85af99e6b1901e5f3b40bd2 debuginfo(build-id) = 4167ce12271107cef912deeeb765409c2ed26275 debuginfo(build-id) = 42aae2a86dfed9ab6359ff67901c267cc5107c34 debuginfo(build-id) = 43a7122e77aa68788ab453b7aec4a08f3d289c47 debuginfo(build-id) = 4522c1ef123a9b31ed018659a6eae8ca29b18789 debuginfo(build-id) = 4901f74677bbc002586ce19f4edb7054a59cc1aa debuginfo(build-id) = 4beb0f8ca53e95c72cd256bb5306b8624a6dd5b2 debuginfo(build-id) = 4e136a0024f11f9546505e1d53939915e5adc16f debuginfo(build-id) = 4e2daaeaf2fd07f441aafe690a87ba7ea0d9a787 debuginfo(build-id) = 501e5e8d234d181de38818168481306669e40b4e debuginfo(build-id) = 523b70c3abdc6810b6812c38a675e88963f791d9 debuginfo(build-id) = 53fc2e389a63a4582cee6e604232a931303fe0cd debuginfo(build-id) = 55ad700bfd3f2807036bfa1c8ff255093540c15c debuginfo(build-id) = 5f778c3821f58af12b3e0cd97f09cdb43aaa4b33 debuginfo(build-id) = 60945fb38e3aa49d6754e3d58c28ac4100391950 debuginfo(build-id) = 6227dcfdd03c91c0cc6e3ac5d67cf5c194672316 debuginfo(build-id) = 629cb63bce42afe92a725dd72b5f46ebf0e8fdba debuginfo(build-id) = 64500bad5e5da8f2f42bb65f51bb445a8eee7930 debuginfo(build-id) = 65533cc5123a6818442a525d781c5715be4825fc debuginfo(build-id) = 68294a66ebe55871192e69d7d0b4a98988e6b85c debuginfo(build-id) = 69865327e8eb4c2c84b613d56107652923c578cf debuginfo(build-id) = 6bfe97181e938b8b4e9522f06458494a46ca1f6a debuginfo(build-id) = 7007bf36e8a14d53d79d0fbd47a273207648b210 debuginfo(build-id) = 74374d4ac353a5adadbc684398c34ccbe00b9e75 debuginfo(build-id) = 75d3ddf0ade7a38d5b91f4e8639143fd698e1673 debuginfo(build-id) = 787654a205619ad6dfa807bd25bb259192046236 debuginfo(build-id) = 788534761149c16a42af8a1a9125f97f233c9392 debuginfo(build-id) = 7956ff040a33bf8b5c11c301f821edff60f28ae3 debuginfo(build-id) = 7a6d6fcd94aa6ca99d200d60f9fe01c164daca99 debuginfo(build-id) = 7ba28527742515e876f6503bee8dea07e58a5a0a debuginfo(build-id) = 7d1319481c20f41584162d876d603e3cf0d6cf33 debuginfo(build-id) = 7fdff8504a2b3e05b1c4e307c1e4d5760fbf0441 debuginfo(build-id) = 81fb5198a9ac0f49972f19655cb2c5455aa7e2fc debuginfo(build-id) = 8223c6e0e9ca0cb0543dda2f7bac04e9279439b0 debuginfo(build-id) = 82b31f27debbeef01d12e672ff6f84eb52b34462 debuginfo(build-id) = 82f4128bad080d7a9ddf153aa605a2ef028143bb debuginfo(build-id) = 88ce144263d92078c6bb20618c3d215e79ea517d debuginfo(build-id) = 89ecc73453c09a68008fe6efd98001049a8a20a1 debuginfo(build-id) = 8c349cd053aa6e7e8cd72319ab7e1f7ff30a4040 debuginfo(build-id) = 8f666f70612461b2156b03aea111f1112ac8b167 debuginfo(build-id) = 928d1e17c8457dec0112db0e16f96bf7d66b5e3b debuginfo(build-id) = 92d24b80f64cd4a35ff78c3583bb515857e96ad2 debuginfo(build-id) = 9341c617a9cf5d656abd2afb2057ea67c9e0c00e debuginfo(build-id) = 934289d22d08a27dc70d8e081310718c2a52ba47 debuginfo(build-id) = 9462566c965288c6fe4a415f57e98886f07d08c9 debuginfo(build-id) = 9691b93b5a8f7b73d1eb7cc86e077657af0f3539 debuginfo(build-id) = 980ca91a81ed778ccbcdc5acca1e035b5ce65354 debuginfo(build-id) = 9c1b20a4d88291d7b6b9fccba72297ac2be16762 debuginfo(build-id) = 9c35a90fde28a734e46a9934b4676cbc906c6dac debuginfo(build-id) = a4e0754bfbfc282f19c3ee49111c7a1e496c17eb debuginfo(build-id) = a53856cba8b54ebd90783fbba0dd9c5dc019c48b debuginfo(build-id) = a5ec300e94fb67fbe43e4327b23827d364cba272 debuginfo(build-id) = a5f1f8e999164465fc284cca2795baaa87da6048 debuginfo(build-id) = a96916fee0e83f268cf52cbf5195e048fcbf944d debuginfo(build-id) = aa2f90a106265a0f8d34152ffa8f4bb90c065c97 debuginfo(build-id) = ad016fbd705cee6b91390ed19fd0e3a165279ed4 debuginfo(build-id) = ad6e3b8d7ac66dcd4981b284864968957dab134d debuginfo(build-id) = ada87daa3b09402d43ed0685d2ee31caaa01a1c7 debuginfo(build-id) = ae91a0c8a49e4d887ebda7fe91dfff0e150b3a45 debuginfo(build-id) = afeb5c8745f5466cf91d50b0e70fe844590c6eae debuginfo(build-id) = b41b6aecf8964a4f48aca6629acb48cc88a56ad5 debuginfo(build-id) = b4ac712d742166d62a22f4edbea8043cec91a0a4 debuginfo(build-id) = ba0d1998f298ff6cfeb75045c3edaacc60e4a8ba debuginfo(build-id) = ba2b40b602a0f4e7826dd7fb36a39887b0cb6cb8 debuginfo(build-id) = bbfa68c52c3fc4b38b4d71172b31b1dc58d37526 debuginfo(build-id) = bc403125472c50ece6a6bcd5b6479480a79be063 debuginfo(build-id) = bc77c03a634d662e68c80bc2b0a075b4344426ff debuginfo(build-id) = bcfb7b854f724dc544b4ae443151c84ab656b179 debuginfo(build-id) = be2f0b8b8581f38e5d709c01c3078913cb650a84 debuginfo(build-id) = c13c13f12993c7b93a9a7b44a871f436d6b13c52 debuginfo(build-id) = c2d90de18864f47aeca0b86bf87fec8d007b00e2 debuginfo(build-id) = c55590357e12e3ab63d623db3335e0ad606a55da debuginfo(build-id) = c7394ace4be58a1e42a694d8a86439845ee1612f debuginfo(build-id) = c8183ae9070690b035b8d46599c3a084aeb92ef0 debuginfo(build-id) = c8d096459406fc0faf2a9f86cc93c9918327a491 debuginfo(build-id) = c9a07b43c142acd2b0cfd58435fc41f21c6493c3 debuginfo(build-id) = ca14e114964c2a48637f812c7c4e3727ccde0539 debuginfo(build-id) = ceb6d3b5f310f5875818f269364dbd37e6adb494 debuginfo(build-id) = d0bcadb66477265de9142848bf02ae3e32824f2f debuginfo(build-id) = d186154bbc3aa935da4b55e2ba6caa3e5580176f debuginfo(build-id) = d3537e4e6c626d79dffb2ae37dc6476f9b9e970b debuginfo(build-id) = d5a361ac93d33ccbf9bc6b8ba2e95c758e44e94b debuginfo(build-id) = d6a4c15f7fbe6bd372d83619b315f0df3722934f debuginfo(build-id) = d77acb671b803b281ecc25ea8ffc45c29456d0ff debuginfo(build-id) = d97a3932a6ba000e22003a6c135ecbb86500c25f debuginfo(build-id) = d9fc1965d1c12f6692e791ca5ae37463016c9336 debuginfo(build-id) = dd57a7363ab90e1ba0b2da3386d0f444fc1ab9f0 debuginfo(build-id) = dedfca5a6c193014c4520c072501fdff3a5d1cd8 debuginfo(build-id) = df0c1860ad5ddb05891201519e30c3b73ba44f3a debuginfo(build-id) = e18e2622eb031eeb73a201d491924f587a2bfab5 debuginfo(build-id) = e379e95bf6a3210963cbfea114abc05650dbe5ea debuginfo(build-id) = e37c7470340508ebcf624986484bdfbb39c7f3bb debuginfo(build-id) = e59db759e67bcbd2df40a137586cb55e060016e4 debuginfo(build-id) = e5d75a0ac5fd9f8d462faed81e89de8bdc9c8a58 debuginfo(build-id) = e7b67fa3e3091ae48438c4eec5bb4d3a90fdfc49 debuginfo(build-id) = e913475092e05cc77d1dc5ea1a09badd53ee11f8 debuginfo(build-id) = e91aabee0a00da40dea32c267c9c3e9c73aa482e debuginfo(build-id) = ea1bb34224001c57580a5d2989ab00290ea401c9 debuginfo(build-id) = ed67cdddda142cf38bd4ddab2ca7f63a328aa677 debuginfo(build-id) = ee189af57a97a69043a384f33d5462b56d98d102 debuginfo(build-id) = f0a1d2e10fc62fceab542415506bcf2b862ad3cb debuginfo(build-id) = f135e0d839dfe6343a2b7db58e41fbe170a19bae debuginfo(build-id) = f3216dcce1372b7fe2c0f99265388865bf384186 debuginfo(build-id) = f653ef50760645b878c4ed2c2b393da2b49f2764 debuginfo(build-id) = f7874db27a97dda20cbaef40fa9507c7f36c6688 debuginfo(build-id) = f944af73557b78538f91ec5d93ead985f99afdd6 debuginfo(build-id) = f9abb16ca1ca536fd256a55e0cee566f39f01be5 debuginfo(build-id) = fa63b49a6a276e19a5dbf03c20355b1c6a223af2 debuginfo(build-id) = faa9fe88c6e82e3a9507cf321205a5d0e81c0ce7 debuginfo(build-id) = fbb65b273d89d18fad6fbe752f4de2a1d66b6697 debuginfo(build-id) = fcb1e01ad68f372319938ef1e8911be2ee0704ff debuginfo(build-id) = feb7610f7826748940d3a00e8b5cd15be7cc6521
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: conglomerate-debugsource(x86-64) = 1.6.80-1.20120308git166303d.fc43
Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT
Wrote: /builddir/build/RPMS/conglomerate-debugsource-1.6.80-1.20120308git166303d.fc43.x86_64.rpm
Wrote: /builddir/build/RPMS/conglomerate-1.6.80-1.20120308git166303d.fc43.x86_64.rpm
Wrote: /builddir/build/RPMS/conglomerate-debuginfo-1.6.80-1.20120308git166303d.fc43.x86_64.rpm
Finish: rpmbuild conglomerate-1.6.80-1.20120308git166303d.fc43.src.rpm
Finish: build phase for conglomerate-1.6.80-1.20120308git166303d.fc43.src.rpm
INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan
INFO: /var/lib/mock/fedora-43-x86_64-1791435628.862660/root/var/log/dnf5.log
INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz
/bin/tar: Removing leading `/' from member names
INFO: Done(/var/lib/copr-rpmbuild/results/conglomerate-1.6.80-1.20120308git166303d.fc43.src.rpm) Config(child) 0 minutes 45 seconds
INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results
INFO: Cleaning up build root ('cleanup_on_success=True')
Start: clean chroot
INFO: unmounting tmpfs.
Finish: clean chroot
Finish: run
Running RPMResults tool
Package info:
{
    "packages": [
        {
            "name": "conglomerate-debuginfo",
            "epoch": null,
            "version": "1.6.80",
            "release": "1.20120308git166303d.fc43",
            "arch": "x86_64"
        },
        {
            "name": "conglomerate-debugsource",
            "epoch": null,
            "version": "1.6.80",
            "release": "1.20120308git166303d.fc43",
            "arch": "x86_64"
        },
        {
            "name": "conglomerate",
            "epoch": null,
            "version": "1.6.80",
            "release": "1.20120308git166303d.fc43",
            "arch": "x86_64"
        },
        {
            "name": "conglomerate",
            "epoch": null,
            "version": "1.6.80",
            "release": "1.20120308git166303d.fc43",
            "arch": "src"
        }
    ]
}
RPMResults finished